Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125870 | sp|Q7XII4|REM41_ORYSJ | 37.097 | 124 | 77 | 1 | 433 | 555 | 193 | 316 | 4.11e-13 | 73.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125870 | A0A072VDZ7 | 97.143 | 560 | 14 | 1 | 1 | 560 | 1 | 558 | 0.0 | 1118 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017960 | Msa0125870 | 0.937109 | 5.904676e-98 | -8.615850e-47 |
| Msa0051920 | Msa0125870 | 0.949178 | 2.149010e-107 | -8.615850e-47 |
| Msa0125870 | Msa0307280 | 0.813753 | 2.182295e-51 | -8.615850e-47 |
| Msa0125870 | Msa0377710 | 0.812977 | 3.231790e-51 | -8.615850e-47 |
| Msa0125870 | Msa0427930 | 0.811396 | 7.148350e-51 | -8.615850e-47 |
| Msa0125870 | Msa0518590 | 0.818764 | 1.653619e-52 | -8.615850e-47 |
| Msa0125870 | Msa0660370 | 0.821692 | 3.526490e-53 | -8.615850e-47 |
| Msa0125870 | Msa0751870 | 0.803576 | 3.263566e-49 | -8.615850e-47 |
| Msa0125870 | Msa0837710 | 0.802011 | 6.867927e-49 | -8.615850e-47 |
| Msa0125870 | Msa0880270 | 0.829543 | 4.854976e-55 | -8.615850e-47 |
| Msa0125870 | Msa0982650 | 0.819906 | 9.078397e-53 | -8.615850e-47 |
| Msa0125870 | Msa1072960 | 0.821536 | 3.832103e-53 | -8.615850e-47 |
| Msa0125870 | Msa1104110 | 0.821642 | 3.622346e-53 | -8.615850e-47 |
| Msa0125870 | Msa1147700 | 0.819473 | 1.140117e-52 | -8.615850e-47 |
| Msa0125870 | Msa1160910 | 0.810330 | 1.216473e-50 | -8.615850e-47 |
| Msa0125870 | Msa1174840 | 0.821689 | 3.533591e-53 | -8.615850e-47 |
| Msa0125870 | Msa1290730 | 0.800923 | 1.147769e-48 | -8.615850e-47 |
| Msa0125870 | Msa1306640 | 0.830918 | 2.240388e-55 | -8.615850e-47 |
| Msa0125870 | Msa1315130 | 0.818900 | 1.539600e-52 | -8.615850e-47 |
| Msa0125870 | Msa1375280 | 0.823345 | 1.456347e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125870 | MtrunA17_Chr1g0153281 | 96.377 | 552 | 17 | 2 | 9 | 560 | 72 | 620 | 0.0 | 1091 |
| Msa0125870 | MtrunA17_Chr8g0375091 | 40.758 | 422 | 204 | 13 | 170 | 559 | 30 | 437 | 5.60e-73 | 239 |
| Msa0125870 | MtrunA17_Chr5g0402201 | 37.753 | 445 | 189 | 16 | 160 | 559 | 2 | 403 | 7.53e-58 | 198 |
| Msa0125870 | MtrunA17_Chr8g0375241 | 27.733 | 375 | 211 | 9 | 222 | 557 | 148 | 501 | 6.47e-20 | 93.2 |
| Msa0125870 | MtrunA17_Chr8g0345191 | 28.216 | 241 | 144 | 5 | 343 | 557 | 222 | 459 | 1.04e-18 | 89.0 |
| Msa0125870 | MtrunA17_Chr8g0377061 | 38.235 | 102 | 63 | 0 | 449 | 550 | 247 | 348 | 1.39e-14 | 75.5 |
| Msa0125870 | MtrunA17_Chr8g0376741 | 26.695 | 236 | 134 | 5 | 360 | 557 | 291 | 525 | 1.80e-13 | 73.2 |
| Msa0125870 | MtrunA17_Chr8g0349271 | 35.577 | 104 | 66 | 1 | 453 | 555 | 97 | 200 | 4.24e-12 | 65.5 |
| Msa0125870 | MtrunA17_Chr7g0257771 | 37.113 | 97 | 61 | 0 | 439 | 535 | 163 | 259 | 1.77e-11 | 65.1 |
| Msa0125870 | MtrunA17_Chr1g0173571 | 33.333 | 117 | 78 | 0 | 439 | 555 | 157 | 273 | 2.21e-11 | 64.7 |
| Msa0125870 | MtrunA17_Chr1g0203401 | 35.577 | 104 | 66 | 1 | 453 | 555 | 106 | 209 | 6.32e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125870 | AT1G45207.3 | 50.696 | 503 | 191 | 18 | 67 | 560 | 95 | 549 | 4.54e-132 | 396 |
| Msa0125870 | AT1G45207.2 | 50.098 | 509 | 191 | 20 | 67 | 560 | 95 | 555 | 5.15e-128 | 386 |
| Msa0125870 | AT4G36970.1 | 39.627 | 429 | 190 | 18 | 170 | 555 | 12 | 414 | 9.74e-44 | 161 |
| Msa0125870 | AT2G02170.3 | 28.226 | 372 | 211 | 11 | 222 | 560 | 11 | 359 | 1.33e-20 | 94.0 |
| Msa0125870 | AT2G02170.6 | 28.226 | 372 | 211 | 11 | 222 | 560 | 11 | 359 | 1.33e-20 | 94.0 |
| Msa0125870 | AT2G02170.1 | 28.302 | 371 | 212 | 11 | 222 | 560 | 136 | 484 | 6.47e-20 | 93.6 |
| Msa0125870 | AT2G02170.2 | 28.302 | 371 | 212 | 11 | 222 | 560 | 136 | 484 | 6.47e-20 | 93.6 |
| Msa0125870 | AT2G02170.5 | 28.302 | 371 | 212 | 11 | 222 | 560 | 136 | 484 | 6.47e-20 | 93.6 |
| Msa0125870 | AT2G02170.4 | 28.302 | 371 | 212 | 11 | 222 | 560 | 136 | 484 | 6.47e-20 | 93.6 |
| Msa0125870 | AT1G30320.1 | 25.661 | 378 | 201 | 13 | 219 | 560 | 175 | 508 | 5.16e-18 | 87.8 |
| Msa0125870 | AT1G67590.1 | 33.168 | 202 | 119 | 5 | 355 | 550 | 141 | 332 | 1.16e-15 | 79.0 |
| Msa0125870 | AT1G53860.2 | 26.378 | 254 | 141 | 11 | 339 | 557 | 127 | 369 | 2.76e-13 | 72.0 |
| Msa0125870 | AT1G53860.1 | 26.667 | 255 | 141 | 12 | 339 | 558 | 195 | 438 | 2.89e-13 | 72.4 |
| Msa0125870 | AT3G61260.1 | 34.615 | 104 | 67 | 1 | 453 | 555 | 109 | 212 | 9.31e-12 | 65.1 |
| Msa0125870 | AT3G57540.1 | 32.381 | 105 | 71 | 0 | 443 | 547 | 181 | 285 | 3.30e-11 | 65.1 |
Find 174 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGAACGTTGCCGTCTAAA+TGG | 0.214560 | 1_3:-54652288 | Msa0125870:CDS |
| GAGTATCTCTTTCTCTAAAA+TGG | 0.225892 | 1_3:-54651247 | Msa0125870:CDS |
| TTACTATGTTGACACTAAAT+TGG | 0.250137 | 1_3:-54649250 | Msa0125870:three_prime_UTR |
| TTGTTTGTCCCAGGGCTAAA+AGG | 0.256081 | 1_3:-54650573 | Msa0125870:intron |
| AGAGGCTTATTTCTAAAGTT+TGG | 0.258948 | 1_3:+54649106 | None:intergenic |
| CTTTCTCTAAAATGGATATC+AGG | 0.259197 | 1_3:-54651239 | Msa0125870:CDS |
| AGCTACCCTCTGGGCTCATC+TGG | 0.267123 | 1_3:+54651343 | None:intergenic |
| ACTGAAATTCGCTCAGAAAA+AGG | 0.296875 | 1_3:-54649918 | Msa0125870:CDS |
| GAATAGGGCCTTGTGTTTCT+TGG | 0.297375 | 1_3:+54651176 | None:intergenic |
| CTCACAAGGTTATGTCATTT+CGG | 0.298149 | 1_3:-54649838 | Msa0125870:CDS |
| GAATGCTGTAGAAGCTTAAA+AGG | 0.304020 | 1_3:+54649769 | None:intergenic |
| AATGCTAATGCAACTGGAAT+TGG | 0.310682 | 1_3:-54652544 | Msa0125870:CDS |
| CATAACCTTGTGAGAAGTTC+TGG | 0.325768 | 1_3:+54649847 | None:intergenic |
| GAAGATGAACTTGCAGCATT+TGG | 0.328958 | 1_3:-54653138 | Msa0125870:CDS |
| CTGAACCTCTACCAGTGAAT+AGG | 0.332401 | 1_3:+54651160 | None:intergenic |
| TCAACGATTGACCCTGCATC+TGG | 0.355432 | 1_3:+54651945 | None:intergenic |
| GCATTAACAGCAGCAGAAAA+AGG | 0.359752 | 1_3:+54652073 | None:intergenic |
| CACCATTACCAACTTGCTTC+CGG | 0.360198 | 1_3:+54652335 | None:intergenic |
| TGACGATAATTCGGAGTTCC+AGG | 0.366291 | 1_3:+54652418 | None:intergenic |
| AGAGAAAGAAGTCCTCATAT+TGG | 0.380866 | 1_3:+54651308 | None:intergenic |
| GATGGGTTTACAAATAGTTC+TGG | 0.388906 | 1_3:-54652043 | Msa0125870:CDS |
| GGAGAAGTTTGATGCTTTCA+AGG | 0.390085 | 1_3:-54651415 | Msa0125870:CDS |
| TCTGGTGGCAATGGTGGTGG+AGG | 0.393951 | 1_3:-54652025 | Msa0125870:CDS |
| TATGGTTCAGACTAGGAAAT+CGG | 0.396156 | 1_3:-54652479 | Msa0125870:CDS |
| CTGAACAATGCTAATGCAAC+TGG | 0.402251 | 1_3:-54652550 | Msa0125870:CDS |
| TCGGGAACGGGTACAGTGAC+GGG | 0.403774 | 1_3:-54652460 | Msa0125870:CDS |
| CTGCGTTGTGTTTAAGTAAT+GGG | 0.406242 | 1_3:-54652309 | Msa0125870:CDS |
| GAGAAAGAAGTCCTCATATT+GGG | 0.411403 | 1_3:+54651309 | None:intergenic |
| TGAATATCATCTATAGTAGA+AGG | 0.414369 | 1_3:-54649029 | Msa0125870:three_prime_UTR |
| TGCCTTGTAGCCTCATCCTT+GGG | 0.421633 | 1_3:-54649170 | Msa0125870:three_prime_UTR |
| CCAGCACTCGATCTTCATCT+TGG | 0.432083 | 1_3:-54651107 | Msa0125870:CDS |
| TTCGGATCCGGATCCGGATC+TGG | 0.432532 | 1_3:+54653071 | None:intergenic |
| GCTGTTAATGCCTCAGCTGA+TGG | 0.434402 | 1_3:-54652061 | Msa0125870:CDS |
| CCTTGACAATGACGATAATT+CGG | 0.435234 | 1_3:+54652409 | None:intergenic |
| TTTGCTATTTCAGATGAAGT+TGG | 0.436926 | 1_3:-54649981 | Msa0125870:intron |
| GGTTCTTCCCCTCGATTAGT+TGG | 0.437388 | 1_3:-54652517 | Msa0125870:CDS |
| TGGAGCTATGAAGAAGAGTA+TGG | 0.441511 | 1_3:-54652497 | Msa0125870:CDS |
| GGTGGTGTTGCAATGCAAAA+AGG | 0.444448 | 1_3:-54652388 | Msa0125870:CDS |
| GTGCCTTGTAGCCTCATCCT+TGG | 0.445358 | 1_3:-54649171 | Msa0125870:three_prime_UTR |
| TGAACCTCTACCAGTGAATA+GGG | 0.445517 | 1_3:+54651161 | None:intergenic |
| TATCAACATCACAGTTCAAA+AGG | 0.454031 | 1_3:-54652838 | Msa0125870:intron |
| TGTTTGTCCCAGGGCTAAAA+GGG | 0.458702 | 1_3:-54650572 | Msa0125870:intron |
| TGAAGACGGAAATCAACTTT+CGG | 0.459392 | 1_3:-54652796 | Msa0125870:CDS |
| TATTCGTTGTATTCGCCTGC+AGG | 0.459546 | 1_3:-54652136 | Msa0125870:CDS |
| ACATGGATGCTCCCAGATGC+AGG | 0.463790 | 1_3:-54651957 | Msa0125870:CDS |
| CTGTTAATGCCTCAGCTGAT+GGG | 0.464443 | 1_3:-54652060 | Msa0125870:CDS |
| TCTGCAAATCTGTGACGGGC+AGG | 0.464852 | 1_3:+54651268 | None:intergenic |
| CAGCACTCGATCTTCATCTT+GGG | 0.467973 | 1_3:-54651106 | Msa0125870:CDS |
| AAACACAAGGCCCTATTCAC+TGG | 0.468324 | 1_3:-54651171 | Msa0125870:CDS |
| ACGGGTACAGTGACGGGGAC+TGG | 0.473096 | 1_3:-54652454 | Msa0125870:CDS |
| TTTCGGAGAGCCGGCCAGAT+GGG | 0.473847 | 1_3:-54649821 | Msa0125870:CDS |
| CTTTCTGTTCAAGTGAAGCT+AGG | 0.476381 | 1_3:-54649746 | Msa0125870:intron |
| GAGGAGCATGAGCTACCCTC+TGG | 0.483081 | 1_3:+54651333 | None:intergenic |
| ATGAACTTGCAGCATTTGGC+AGG | 0.484576 | 1_3:-54653134 | Msa0125870:CDS |
| CCAAGATGAAGATCGAGTGC+TGG | 0.484979 | 1_3:+54651107 | None:intergenic |
| AATGCAACTGGAATTGGAAC+TGG | 0.488888 | 1_3:-54652538 | Msa0125870:CDS |
| GAGAACGTTGCCGTCTAAAT+GGG | 0.489634 | 1_3:-54652287 | Msa0125870:CDS |
| AGCGGACCACTCTTCGACTT+AGG | 0.491435 | 1_3:+54652181 | None:intergenic |
| ATTTCGGAGAGCCGGCCAGA+TGG | 0.493284 | 1_3:-54649822 | Msa0125870:CDS |
| TTAGGTCTCCTCAGTGGCTG+TGG | 0.494524 | 1_3:+54652199 | None:intergenic |
| GGCCAGATGGGTTCTTTGAG+TGG | 0.494804 | 1_3:-54649809 | Msa0125870:CDS |
| GTTTGATGCTTTCAAGGATG+CGG | 0.497959 | 1_3:-54651409 | Msa0125870:CDS |
| ACTGGTACATTTCCGAGTCC+TGG | 0.500376 | 1_3:-54652436 | Msa0125870:CDS |
| AGTGGTCCGCTTGGTCCACC+TGG | 0.500934 | 1_3:-54652169 | Msa0125870:CDS |
| CTCCCAAGGATGAGGCTACA+AGG | 0.503063 | 1_3:+54649168 | None:intergenic |
| TTTGTTCATAATCTTATCCA+TGG | 0.503384 | 1_3:+54649940 | None:intergenic |
| CGCATGGGAAAATTTGCAAA+AGG | 0.505130 | 1_3:-54650533 | Msa0125870:CDS |
| CTGGTGGCAATGGTGGTGGA+GGG | 0.506953 | 1_3:-54652024 | Msa0125870:CDS |
| AGTTCTGGTGGCAATGGTGG+TGG | 0.506963 | 1_3:-54652028 | Msa0125870:CDS |
| GGCCGGAAGCAAGTTGGTAA+TGG | 0.508505 | 1_3:-54652337 | Msa0125870:CDS |
| TTCTGGCAACTTGATGAGCC+TGG | 0.509969 | 1_3:+54649864 | None:intergenic |
| ATGTCCCTTCTTGAAACAGC+AGG | 0.510044 | 1_3:+54651372 | None:intergenic |
| AAGCTGGAGTGGTCCAGATC+CGG | 0.511012 | 1_3:-54653084 | Msa0125870:CDS |
| AATGGATATCAGGGATGTGC+AGG | 0.513273 | 1_3:-54651229 | Msa0125870:CDS |
| GTTCAGAAAATGTTGACAGC+TGG | 0.516670 | 1_3:-54651143 | Msa0125870:CDS |
| ACAAATAGTTCTGGTGGCAA+TGG | 0.516869 | 1_3:-54652034 | Msa0125870:CDS |
| AACCACTCAAAGAACCCATC+TGG | 0.516973 | 1_3:+54649807 | None:intergenic |
| GTTATGTCATTTCGGAGAGC+CGG | 0.517925 | 1_3:-54649830 | Msa0125870:CDS |
| TTTCTCTAAAATGGATATCA+GGG | 0.518025 | 1_3:-54651238 | Msa0125870:CDS |
| GCTCGCTCAGTTAGTGTACA+TGG | 0.518862 | 1_3:-54651974 | Msa0125870:CDS |
| CTTTATTTAATAAGCAAGAT+CGG | 0.519759 | 1_3:-54652594 | Msa0125870:CDS |
| AGTTCTGAGCGAGTTGTAAG+TGG | 0.522590 | 1_3:-54652361 | Msa0125870:CDS |
| GAGTGGTCCAGATCCGGATC+CGG | 0.526471 | 1_3:-54653078 | Msa0125870:CDS |
| CAGACTAGGAAATCGGGAAC+GGG | 0.526664 | 1_3:-54652472 | Msa0125870:CDS |
| CATGCTCCTCTCCCAATATG+AGG | 0.528342 | 1_3:-54651320 | Msa0125870:CDS |
| ACCAGGTTTCAGAAATCAGA+AGG | 0.529199 | 1_3:-54649321 | Msa0125870:intron |
| AATAATATATGTATGTACTT+AGG | 0.529868 | 1_3:-54649129 | Msa0125870:three_prime_UTR |
| ATGGTTCAGACTAGGAAATC+GGG | 0.530303 | 1_3:-54652478 | Msa0125870:CDS |
| TTTGATGCTTTCAAGGATGC+GGG | 0.530327 | 1_3:-54651408 | Msa0125870:CDS |
| AAGCATGCGTAACTTTGAGA+TGG | 0.532466 | 1_3:+54648972 | None:intergenic |
| GCTACCCTCTGGGCTCATCT+GGG | 0.532927 | 1_3:+54651344 | None:intergenic |
| ATCGGGAACGGGTACAGTGA+CGG | 0.542516 | 1_3:-54652461 | Msa0125870:CDS |
| GTTCTGAGCGAGTTGTAAGT+GGG | 0.543456 | 1_3:-54652360 | Msa0125870:CDS |
| TTGTTCAGATCTAACGAAGC+AGG | 0.544462 | 1_3:+54652565 | None:intergenic |
| TTGCAGCATTTGGCAGGTCA+CGG | 0.547364 | 1_3:-54653128 | Msa0125870:CDS |
| CTAGCTTCACTTGAACAGAA+AGG | 0.549094 | 1_3:+54649747 | None:intergenic |
| TTTCTTGGACCACCTTGTCA+TGG | 0.550513 | 1_3:+54651191 | None:intergenic |
| TCTGTGACGGGCAGGGAAGG+TGG | 0.550611 | 1_3:+54651276 | None:intergenic |
| TATCCCCTGCTGTTTCAAGA+AGG | 0.551655 | 1_3:-54651377 | Msa0125870:CDS |
| AATACAAACTCCCAAGGATG+AGG | 0.552073 | 1_3:+54649160 | None:intergenic |
| GACGGGCAGGGAAGGTGGAG+TGG | 0.556016 | 1_3:+54651281 | None:intergenic |
| AGAAGCTTAAAAGGCATGAC+AGG | 0.558480 | 1_3:+54649778 | None:intergenic |
| TGAAACAGCAGGGGATACAT+TGG | 0.561049 | 1_3:+54651383 | None:intergenic |
| TCCGCATCTTCCCATTTAGA+CGG | 0.561076 | 1_3:+54652277 | None:intergenic |
| CTGCAAATCTGTGACGGGCA+GGG | 0.561186 | 1_3:+54651269 | None:intergenic |
| ATACTCTGCAAATCTGTGAC+GGG | 0.564896 | 1_3:+54651264 | None:intergenic |
| AAATCTGTGACGGGCAGGGA+AGG | 0.566048 | 1_3:+54651273 | None:intergenic |
| ACTGCGTTGTGTTTAAGTAA+TGG | 0.567379 | 1_3:-54652310 | Msa0125870:CDS |
| CACACGAACGGATCCTTGCA+TGG | 0.568343 | 1_3:-54651996 | Msa0125870:CDS |
| CAACGATTGACCCTGCATCT+GGG | 0.569194 | 1_3:+54651946 | None:intergenic |
| GAGTTCAGTTTCAGTCGACC+AGG | 0.570124 | 1_3:-54649882 | Msa0125870:CDS |
| TGCGTAACTTTGAGATGGAA+AGG | 0.570907 | 1_3:+54648977 | None:intergenic |
| TTGAACAGAAACTATCAAGT+AGG | 0.570919 | 1_3:+54649068 | None:intergenic |
| AGAAGTCCTCATATTGGGAG+AGG | 0.571056 | 1_3:+54651314 | None:intergenic |
| AAAGAAGCGAGCATCTTCCA+TGG | 0.572035 | 1_3:-54649957 | Msa0125870:CDS |
| TCAGACTAGGAAATCGGGAA+CGG | 0.573486 | 1_3:-54652473 | Msa0125870:CDS |
| TGCTGTTTCAAGAAGGGACA+TGG | 0.573943 | 1_3:-54651370 | Msa0125870:CDS |
| AGTGACATTGATTCTGAAGA+CGG | 0.574323 | 1_3:-54652810 | Msa0125870:CDS |
| TTCATAGCTCCAACTAATCG+AGG | 0.574579 | 1_3:+54652508 | None:intergenic |
| ACAAGGCACTTAGATTCTAC+CGG | 0.575457 | 1_3:+54649185 | None:intergenic |
| TAATTCGGAGTTCCAGGACT+CGG | 0.576781 | 1_3:+54652424 | None:intergenic |
| TGGATTAAGAATGTCAAGAT+CGG | 0.577560 | 1_3:-54652633 | Msa0125870:intron |
| GGACCACTCCAGCTTTCACT+CGG | 0.578133 | 1_3:+54653092 | None:intergenic |
| CATGCAAGGATCCGTTCGTG+TGG | 0.580587 | 1_3:+54651997 | None:intergenic |
| TGAAGTACAAGCACTTTAGC+CGG | 0.588600 | 1_3:-54649204 | Msa0125870:three_prime_UTR |
| AATGGGAAGATGCGGAGAGG+TGG | 0.589464 | 1_3:-54652270 | Msa0125870:CDS |
| CCGAATTATCGTCATTGTCA+AGG | 0.589710 | 1_3:-54652409 | Msa0125870:CDS |
| TCATAGCTCCAACTAATCGA+GGG | 0.590491 | 1_3:+54652509 | None:intergenic |
| GATACTCTGCAAATCTGTGA+CGG | 0.592988 | 1_3:+54651263 | None:intergenic |
| AGGAGCATGAGCTACCCTCT+GGG | 0.594386 | 1_3:+54651334 | None:intergenic |
| AGGAAGCCAAAATCACCGCA+TGG | 0.595215 | 1_3:-54650549 | Msa0125870:CDS |
| ATCCCCTGCTGTTTCAAGAA+GGG | 0.596120 | 1_3:-54651376 | Msa0125870:CDS |
| GCTCCGAGTGAAAGCTGGAG+TGG | 0.598646 | 1_3:-54653095 | Msa0125870:CDS |
| AAGGCCCTATTCACTGGTAG+AGG | 0.600698 | 1_3:-54651165 | Msa0125870:CDS |
| GGGTTTACAAATAGTTCTGG+TGG | 0.601682 | 1_3:-54652040 | Msa0125870:CDS |
| TCTTTGAATACAAACTCCCA+AGG | 0.601869 | 1_3:+54649154 | None:intergenic |
| GGAAGCCAAAATCACCGCAT+GGG | 0.605836 | 1_3:-54650548 | Msa0125870:CDS |
| AAGTCGAAGAGTGGTCCGCT+TGG | 0.609344 | 1_3:-54652178 | Msa0125870:CDS |
| GCAACCCAGATGAGCCCAGA+GGG | 0.612368 | 1_3:-54651348 | Msa0125870:CDS |
| TGGAGGGCTTCCCACACGAA+CGG | 0.615766 | 1_3:-54652008 | Msa0125870:CDS |
| AACGAATAATACGCAACACC+AGG | 0.618153 | 1_3:+54652151 | None:intergenic |
| CTAACTGAGCGAGCCATGCA+AGG | 0.618650 | 1_3:+54651983 | None:intergenic |
| AGAAGAGTATGGTTCAGACT+AGG | 0.619003 | 1_3:-54652486 | Msa0125870:CDS |
| CAATCGTTGATTCCTTCCCG+AGG | 0.619881 | 1_3:-54651932 | Msa0125870:intron |
| TCTTTCTCTCTAGCACTCAA+AGG | 0.621209 | 1_3:-54652753 | Msa0125870:intron |
| TGTCCCTTCTTGAAACAGCA+GGG | 0.622908 | 1_3:+54651373 | None:intergenic |
| CGGGAACGGGTACAGTGACG+GGG | 0.623331 | 1_3:-54652459 | Msa0125870:CDS |
| AATAGTTCTGGTGGCAATGG+TGG | 0.623434 | 1_3:-54652031 | Msa0125870:CDS |
| TTCTGAGCGAGTTGTAAGTG+GGG | 0.623568 | 1_3:-54652359 | Msa0125870:CDS |
| CATGGATGCTCCCAGATGCA+GGG | 0.623857 | 1_3:-54651956 | Msa0125870:CDS |
| GCCGTCTAAATGGGAAGATG+CGG | 0.624201 | 1_3:-54652278 | Msa0125870:CDS |
| GAATAATACGCAACACCAGG+TGG | 0.633920 | 1_3:+54652154 | None:intergenic |
| TTGTCCCAGGGCTAAAAGGG+AGG | 0.643693 | 1_3:-54650569 | Msa0125870:intron |
| TTAGCATAACAACCTCGGGA+AGG | 0.645636 | 1_3:+54651920 | None:intergenic |
| GGATATCAGGGATGTGCAGG+TGG | 0.646158 | 1_3:-54651226 | Msa0125870:CDS |
| ATGCAAGGATCCGTTCGTGT+GGG | 0.646814 | 1_3:+54651998 | None:intergenic |
| ATTTGTAAACCCATCAGCTG+AGG | 0.649726 | 1_3:+54652051 | None:intergenic |
| GCAACACCAGGTGGACCAAG+CGG | 0.656850 | 1_3:+54652163 | None:intergenic |
| ACTCAAAGAACCCATCTGGC+CGG | 0.658538 | 1_3:+54649811 | None:intergenic |
| TCTGAGCGAGTTGTAAGTGG+GGG | 0.659759 | 1_3:-54652358 | Msa0125870:CDS |
| AGGAGACCTAAGTCGAAGAG+TGG | 0.659853 | 1_3:-54652187 | Msa0125870:CDS |
| GTCCCTTCTTGAAACAGCAG+GGG | 0.661080 | 1_3:+54651374 | None:intergenic |
| GGCAACCCAGATGAGCCCAG+AGG | 0.663230 | 1_3:-54651349 | Msa0125870:CDS |
| CATAGCTCCAACTAATCGAG+GGG | 0.663654 | 1_3:+54652510 | None:intergenic |
| AGCAGCAATACAGAAACTAG+AGG | 0.664918 | 1_3:-54650500 | Msa0125870:intron |
| AGTTGCCAGAACTTCTCACA+AGG | 0.671762 | 1_3:-54649852 | Msa0125870:CDS |
| AATTATCGTCATTGTCAAGG+TGG | 0.691775 | 1_3:-54652406 | Msa0125870:CDS |
| TTTCAGTTCCACAGCCACTG+AGG | 0.695040 | 1_3:-54652207 | Msa0125870:CDS |
| CTAAATGGGAAGATGCGGAG+AGG | 0.704130 | 1_3:-54652273 | Msa0125870:CDS |
| TTCGACTTAGGTCTCCTCAG+TGG | 0.720239 | 1_3:+54652193 | None:intergenic |
| CAGCATTTGGCAGGTCACGG+TGG | 0.721166 | 1_3:-54653125 | Msa0125870:CDS |
| AACGTGTAACCATGACAAGG+TGG | 0.733238 | 1_3:-54651200 | Msa0125870:CDS |
| AAGGTGGTCCAAGAAACACA+AGG | 0.772366 | 1_3:-54651184 | Msa0125870:CDS |
| ATGAACGTGTAACCATGACA+AGG | 0.775798 | 1_3:-54651203 | Msa0125870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATCTTAAGTTTCATTT+TGG | - | chr1_3:54651739-54651758 | Msa0125870:intron | 15.0% |
| !!! | ATTATCTTAAGTTTCATTTT+GGG | - | chr1_3:54651740-54651759 | Msa0125870:intron | 15.0% |
| !!! | ATTACTTTCCTTTATTTTTA+AGG | + | chr1_3:54652096-54652115 | None:intergenic | 15.0% |
| !!! | TACATAATTTAGAATTTGAA+GGG | - | chr1_3:54652505-54652524 | Msa0125870:CDS | 15.0% |
| !! | AATAATATATGTATGTACTT+AGG | - | chr1_3:54652996-54653015 | Msa0125870:CDS | 15.0% |
| !!! | TTTCTGTTATGATTTTGATT+CGG | + | chr1_3:54649075-54649094 | None:intergenic | 20.0% |
| !!! | TGAGTTTGTTTTTTTGTATT+TGG | - | chr1_3:54649472-54649491 | Msa0125870:intron | 20.0% |
| !!! | CTTTATTTAATAAGCAAGAT+CGG | - | chr1_3:54649531-54649550 | Msa0125870:intron | 20.0% |
| !!! | TTTAGAATTTTAATATGCTC+TGG | - | chr1_3:54650414-54650433 | Msa0125870:intron | 20.0% |
| !!! | TTTTTTCATCTGCTAAATAA+AGG | - | chr1_3:54651107-54651126 | Msa0125870:CDS | 20.0% |
| !!! | TCTTTATATGACATTGATTT+CGG | + | chr1_3:54651157-54651176 | None:intergenic | 20.0% |
| !!! | TTTTCTAGTTTGAATTGAAT+AGG | + | chr1_3:54651422-54651441 | None:intergenic | 20.0% |
| !! | AAGATAATATATGTGTATGT+AGG | + | chr1_3:54651728-54651747 | None:intergenic | 20.0% |
| !! | TATGATGAAGTAAAAAAAAG+TGG | + | chr1_3:54651996-54652015 | None:intergenic | 20.0% |
| !!! | CTACATAATTTAGAATTTGA+AGG | - | chr1_3:54652504-54652523 | Msa0125870:CDS | 20.0% |
| !! | ATAGTAATTTAGTAAACTTG+AGG | + | chr1_3:54652700-54652719 | None:intergenic | 20.0% |
| !! | TGTAAGTTATGCAAATTTAA+TGG | + | chr1_3:54652738-54652757 | None:intergenic | 20.0% |
| !!! | TTCTTTATGCTTTTTGATTA+AGG | - | chr1_3:54652767-54652786 | Msa0125870:CDS | 20.0% |
| ! | AAAAAGTGAGAAAAAGAAAG+TGG | + | chr1_3:54649220-54649239 | None:intergenic | 25.0% |
| ! | ATTCATTAAATCAGAGTCTT+TGG | - | chr1_3:54650461-54650480 | Msa0125870:intron | 25.0% |
| !!! | TATGTTTTGAATCTGATTTG+CGG | - | chr1_3:54650514-54650533 | Msa0125870:CDS | 25.0% |
| !!! | TTTTCTTTTCTTTTTCACGT+TGG | - | chr1_3:54650673-54650692 | Msa0125870:intron | 25.0% |
| !!! | TTTCTCTAAAATGGATATCA+GGG | - | chr1_3:54650887-54650906 | Msa0125870:intron | 25.0% |
| ! | TTATTACCACCTTTCAAATA+TGG | - | chr1_3:54651382-54651401 | Msa0125870:CDS | 25.0% |
| !!! | AAAACTCATATTACTGACTT+AGG | - | chr1_3:54651489-54651508 | Msa0125870:intron | 25.0% |
| !!! | TATTGACTTGCTTTTACTAT+TGG | - | chr1_3:54651849-54651868 | Msa0125870:intron | 25.0% |
| !!! | ATTGACTTGCTTTTACTATT+GGG | - | chr1_3:54651850-54651869 | Msa0125870:intron | 25.0% |
| !!! | CCTTTATTTTTAAGGAGAAA+GGG | + | chr1_3:54652088-54652107 | None:intergenic | 25.0% |
| !!! | TCCTTTATTTTTAAGGAGAA+AGG | + | chr1_3:54652089-54652108 | None:intergenic | 25.0% |
| ! | TTTGTTCATAATCTTATCCA+TGG | + | chr1_3:54652188-54652207 | None:intergenic | 25.0% |
| ! | ATTGTATGCTAATATATTCG+TGG | - | chr1_3:54652438-54652457 | Msa0125870:CDS | 25.0% |
| ! | TTACACATAACCTAAAACTA+TGG | + | chr1_3:54652552-54652571 | None:intergenic | 25.0% |
| !! | AAAAAGCATAAAGAAGAACA+AGG | + | chr1_3:54652762-54652781 | None:intergenic | 25.0% |
| ! | TTACTATGTTGACACTAAAT+TGG | - | chr1_3:54652875-54652894 | Msa0125870:intron | 25.0% |
| ! | TGAATATCATCTATAGTAGA+AGG | - | chr1_3:54653096-54653115 | Msa0125870:CDS | 25.0% |
| !!! | TTATGATTTTGATTCGGATC+CGG | + | chr1_3:54649069-54649088 | None:intergenic | 30.0% |
| GGAAAAGCAGAAAAAACAAA+AGG | - | chr1_3:54649153-54649172 | Msa0125870:three_prime_UTR | 30.0% | |
| TATCAACATCACAGTTCAAA+AGG | - | chr1_3:54649287-54649306 | Msa0125870:three_prime_UTR | 30.0% | |
| TGGATTAAGAATGTCAAGAT+CGG | - | chr1_3:54649492-54649511 | Msa0125870:intron | 30.0% | |
| TAAGATTAGCATAACAACCT+CGG | + | chr1_3:54650213-54650232 | None:intergenic | 30.0% | |
| TCACAACTCAAAACTAGATA+AGG | + | chr1_3:54650262-54650281 | None:intergenic | 30.0% | |
| CTGTATTAACTATTGTGATG+TGG | - | chr1_3:54650343-54650362 | Msa0125870:intron | 30.0% | |
| AGAGTCTTTGGATGAAAATT+GGG | - | chr1_3:54650473-54650492 | Msa0125870:intron | 30.0% | |
| ! | GCATAATAGTTTTCATAACG+TGG | + | chr1_3:54650566-54650585 | None:intergenic | 30.0% |
| CACATAATACTAACATGACA+TGG | + | chr1_3:54650618-54650637 | None:intergenic | 30.0% | |
| ! | GAGTATCTCTTTCTCTAAAA+TGG | - | chr1_3:54650878-54650897 | Msa0125870:intron | 30.0% |
| !! | CTTTCTCTAAAATGGATATC+AGG | - | chr1_3:54650886-54650905 | Msa0125870:intron | 30.0% |
| TATAATTTCAAGGTAGCTCA+TGG | + | chr1_3:54651252-54651271 | None:intergenic | 30.0% | |
| TGAGCTACCTTGAAATTATA+TGG | - | chr1_3:54651252-54651271 | Msa0125870:CDS | 30.0% | |
| CTACCTTGAAATTATATGGT+TGG | - | chr1_3:54651256-54651275 | Msa0125870:CDS | 30.0% | |
| ACTCCAACCATATAATTTCA+AGG | + | chr1_3:54651262-54651281 | None:intergenic | 30.0% | |
| CACTAAAGTTGCTATGTTAT+TGG | - | chr1_3:54651306-54651325 | Msa0125870:CDS | 30.0% | |
| CAATCAGTACCATATTTGAA+AGG | + | chr1_3:54651394-54651413 | None:intergenic | 30.0% | |
| CTAGTTTGAATTGAATAGGA+TGG | + | chr1_3:54651418-54651437 | None:intergenic | 30.0% | |
| !! | AGTAAATTTTGTTTGTCCCA+GGG | - | chr1_3:54651544-54651563 | Msa0125870:intron | 30.0% |
| TAAACAAAGAACCACTTGAA+GGG | - | chr1_3:54651648-54651667 | Msa0125870:intron | 30.0% | |
| TACATAAAAATCCCTTCAAG+TGG | + | chr1_3:54651662-54651681 | None:intergenic | 30.0% | |
| !!! | TCCCTTGTTTTCTTTATTTC+AGG | - | chr1_3:54651767-54651786 | Msa0125870:intron | 30.0% |
| CCCTGAAATAAAGAAAACAA+GGG | + | chr1_3:54651771-54651790 | None:intergenic | 30.0% | |
| !!! | CCCTTGTTTTCTTTATTTCA+GGG | - | chr1_3:54651768-54651787 | Msa0125870:intron | 30.0% |
| ACCCTGAAATAAAGAAAACA+AGG | + | chr1_3:54651772-54651791 | None:intergenic | 30.0% | |
| AAATTGAACTTAGGGAAAGA+GGG | + | chr1_3:54651807-54651826 | None:intergenic | 30.0% | |
| TCTTTCCCTAAGTTCAATTT+CGG | - | chr1_3:54651807-54651826 | Msa0125870:intron | 30.0% | |
| CCCTTTCTCCTTAAAAATAA+AGG | - | chr1_3:54652085-54652104 | Msa0125870:CDS | 30.0% | |
| !! | TTTGCTATTTCAGATGAAGT+TGG | - | chr1_3:54652144-54652163 | Msa0125870:CDS | 30.0% |
| AGCATACAATTCATCTTACT+AGG | + | chr1_3:54652428-54652447 | None:intergenic | 30.0% | |
| ! | GTCAATTGTACCATAGTTTT+AGG | - | chr1_3:54652539-54652558 | Msa0125870:CDS | 30.0% |
| TAGGTTATGTGTAAGTGTAA+AGG | - | chr1_3:54652558-54652577 | Msa0125870:CDS | 30.0% | |
| ATTTAATGGCAAGTAGGTAA+GGG | + | chr1_3:54652724-54652743 | None:intergenic | 30.0% | |
| AATTTAATGGCAAGTAGGTA+AGG | + | chr1_3:54652725-54652744 | None:intergenic | 30.0% | |
| ATGCAAATTTAATGGCAAGT+AGG | + | chr1_3:54652730-54652749 | None:intergenic | 30.0% | |
| !! | AGAGGCTTATTTCTAAAGTT+TGG | + | chr1_3:54653022-54653041 | None:intergenic | 30.0% |
| ! | AGGAAAAAGAGTACAAAAAG+AGG | + | chr1_3:54653040-54653059 | None:intergenic | 30.0% |
| TTGAACAGAAACTATCAAGT+AGG | + | chr1_3:54653060-54653079 | None:intergenic | 30.0% | |
| !! | AGTGACATTGATTCTGAAGA+CGG | - | chr1_3:54649315-54649334 | Msa0125870:three_prime_UTR | 35.0% |
| TGAAGACGGAAATCAACTTT+CGG | - | chr1_3:54649329-54649348 | Msa0125870:intron | 35.0% | |
| AATGCTAATGCAACTGGAAT+TGG | - | chr1_3:54649581-54649600 | Msa0125870:intron | 35.0% | |
| TATGGTTCAGACTAGGAAAT+CGG | - | chr1_3:54649646-54649665 | Msa0125870:intron | 35.0% | |
| CCTTGACAATGACGATAATT+CGG | + | chr1_3:54649719-54649738 | None:intergenic | 35.0% | |
| AATTATCGTCATTGTCAAGG+TGG | - | chr1_3:54649719-54649738 | Msa0125870:intron | 35.0% | |
| ACTGCGTTGTGTTTAAGTAA+TGG | - | chr1_3:54649815-54649834 | Msa0125870:CDS | 35.0% | |
| CTGCGTTGTGTTTAAGTAAT+GGG | - | chr1_3:54649816-54649835 | Msa0125870:CDS | 35.0% | |
| ! | GATGGGTTTACAAATAGTTC+TGG | - | chr1_3:54650082-54650101 | Msa0125870:intron | 35.0% |
| AAGATTAGCATAACAACCTC+GGG | + | chr1_3:54650212-54650231 | None:intergenic | 35.0% | |
| CAGAGTCTTTGGATGAAAAT+TGG | - | chr1_3:54650472-54650491 | Msa0125870:intron | 35.0% | |
| ATATCATGTACGCAGAAGTA+TGG | + | chr1_3:54650650-54650669 | None:intergenic | 35.0% | |
| CAAACTTCTCCTCTGTAAAT+TGG | + | chr1_3:54650701-54650720 | None:intergenic | 35.0% | |
| GAGAAAGAAGTCCTCATATT+GGG | + | chr1_3:54650819-54650838 | None:intergenic | 35.0% | |
| AGAGAAAGAAGTCCTCATAT+TGG | + | chr1_3:54650820-54650839 | None:intergenic | 35.0% | |
| GGGAAAACTTCACTTCTTAT+TGG | + | chr1_3:54651185-54651204 | None:intergenic | 35.0% | |
| TCAGTACCATATTTGAAAGG+TGG | + | chr1_3:54651391-54651410 | None:intergenic | 35.0% | |
| CTGGGACAAACAAAATTTAC+TGG | + | chr1_3:54651545-54651564 | None:intergenic | 35.0% | |
| !! | CAGTAAATTTTGTTTGTCCC+AGG | - | chr1_3:54651543-54651562 | Msa0125870:intron | 35.0% |
| ! | CTTTTGCAAATTTTCCCATG+CGG | + | chr1_3:54651594-54651613 | None:intergenic | 35.0% |
| GTAAACAAAGAACCACTTGA+AGG | - | chr1_3:54651647-54651666 | Msa0125870:intron | 35.0% | |
| ATGTAGGAGCAATAATTGCT+TGG | + | chr1_3:54651712-54651731 | None:intergenic | 35.0% | |
| GAAATTGAACTTAGGGAAAG+AGG | + | chr1_3:54651808-54651827 | None:intergenic | 35.0% | |
| GATGACCGAAATTGAACTTA+GGG | + | chr1_3:54651815-54651834 | None:intergenic | 35.0% | |
| AGATGACCGAAATTGAACTT+AGG | + | chr1_3:54651816-54651835 | None:intergenic | 35.0% | |
| !! | GTCTTGTCGGTTTAAGATAA+TGG | + | chr1_3:54651913-54651932 | None:intergenic | 35.0% |
| ! | TAAACCGACAAGACTAGTTA+TGG | - | chr1_3:54651919-54651938 | Msa0125870:intron | 35.0% |
| !! | TAGTCCATAACTAGTCTTGT+CGG | + | chr1_3:54651926-54651945 | None:intergenic | 35.0% |
| ! | ATGGACTAATGTCATTACTG+TGG | - | chr1_3:54651938-54651957 | Msa0125870:CDS | 35.0% |
| TGGACTAATGTCATTACTGT+GGG | - | chr1_3:54651939-54651958 | Msa0125870:CDS | 35.0% | |
| AAAGGGATTCTTAATGCATG+CGG | + | chr1_3:54652071-54652090 | None:intergenic | 35.0% | |
| ACTGAAATTCGCTCAGAAAA+AGG | - | chr1_3:54652207-54652226 | Msa0125870:CDS | 35.0% | |
| ! | CTCACAAGGTTATGTCATTT+CGG | - | chr1_3:54652287-54652306 | Msa0125870:CDS | 35.0% |
| GAATGCTGTAGAAGCTTAAA+AGG | + | chr1_3:54652359-54652378 | None:intergenic | 35.0% | |
| CAATTCATCTTACTAGGACA+AGG | + | chr1_3:54652422-54652441 | None:intergenic | 35.0% | |
| TAAGATTCGGATGTAAGAGA+AGG | + | chr1_3:54652660-54652679 | None:intergenic | 35.0% | |
| TTACATCCGAATCTTATCCA+TGG | - | chr1_3:54652664-54652683 | Msa0125870:intron | 35.0% | |
| TACATCCGAATCTTATCCAT+GGG | - | chr1_3:54652665-54652684 | Msa0125870:intron | 35.0% | |
| CAAAACCCATGGATAAGATT+CGG | + | chr1_3:54652673-54652692 | None:intergenic | 35.0% | |
| TCTTTGAATACAAACTCCCA+AGG | + | chr1_3:54652974-54652993 | None:intergenic | 35.0% | |
| GAAGATGAACTTGCAGCATT+TGG | - | chr1_3:54648987-54649006 | Msa0125870:three_prime_UTR | 40.0% | |
| TCTTTCTCTCTAGCACTCAA+AGG | - | chr1_3:54649372-54649391 | Msa0125870:intron | 40.0% | |
| TTGTTCAGATCTAACGAAGC+AGG | + | chr1_3:54649563-54649582 | None:intergenic | 40.0% | |
| CTGAACAATGCTAATGCAAC+TGG | - | chr1_3:54649575-54649594 | Msa0125870:intron | 40.0% | |
| AATGCAACTGGAATTGGAAC+TGG | - | chr1_3:54649587-54649606 | Msa0125870:intron | 40.0% | |
| TCATAGCTCCAACTAATCGA+GGG | + | chr1_3:54649619-54649638 | None:intergenic | 40.0% | |
| TTCATAGCTCCAACTAATCG+AGG | + | chr1_3:54649620-54649639 | None:intergenic | 40.0% | |
| TGGAGCTATGAAGAAGAGTA+TGG | - | chr1_3:54649628-54649647 | Msa0125870:intron | 40.0% | |
| ! | AGAAGAGTATGGTTCAGACT+AGG | - | chr1_3:54649639-54649658 | Msa0125870:intron | 40.0% |
| ATGGTTCAGACTAGGAAATC+GGG | - | chr1_3:54649647-54649666 | Msa0125870:intron | 40.0% | |
| CCGAATTATCGTCATTGTCA+AGG | - | chr1_3:54649716-54649735 | Msa0125870:intron | 40.0% | |
| GTGTTGCAATGCAAAAAGGT+TGG | - | chr1_3:54649741-54649760 | Msa0125870:intron | 40.0% | |
| !! | GTGGATTTTGAGTCCTGTTT+CGG | - | chr1_3:54649874-54649893 | Msa0125870:CDS | 40.0% |
| !! | TGGATTTTGAGTCCTGTTTC+GGG | - | chr1_3:54649875-54649894 | Msa0125870:CDS | 40.0% |
| AACGAATAATACGCAACACC+AGG | + | chr1_3:54649977-54649996 | None:intergenic | 40.0% | |
| GCATTAACAGCAGCAGAAAA+AGG | + | chr1_3:54650055-54650074 | None:intergenic | 40.0% | |
| ATTTGTAAACCCATCAGCTG+AGG | + | chr1_3:54650077-54650096 | None:intergenic | 40.0% | |
| !! | GGGTTTACAAATAGTTCTGG+TGG | - | chr1_3:54650085-54650104 | Msa0125870:intron | 40.0% |
| !! | ACAAATAGTTCTGGTGGCAA+TGG | - | chr1_3:54650091-54650110 | Msa0125870:intron | 40.0% |
| ! | TGTGATGTGGATTGAACTCT+TGG | - | chr1_3:54650356-54650375 | Msa0125870:intron | 40.0% |
| GGAGAAGTTTGATGCTTTCA+AGG | - | chr1_3:54650710-54650729 | Msa0125870:intron | 40.0% | |
| GTTTGATGCTTTCAAGGATG+CGG | - | chr1_3:54650716-54650735 | Msa0125870:intron | 40.0% | |
| TTTGATGCTTTCAAGGATGC+GGG | - | chr1_3:54650717-54650736 | Msa0125870:intron | 40.0% | |
| ATACTCTGCAAATCTGTGAC+GGG | + | chr1_3:54650864-54650883 | None:intergenic | 40.0% | |
| GATACTCTGCAAATCTGTGA+CGG | + | chr1_3:54650865-54650884 | None:intergenic | 40.0% | |
| ATGAACGTGTAACCATGACA+AGG | - | chr1_3:54650922-54650941 | Msa0125870:intron | 40.0% | |
| TGAACCTCTACCAGTGAATA+GGG | + | chr1_3:54650967-54650986 | None:intergenic | 40.0% | |
| GTTCAGAAAATGTTGACAGC+TGG | - | chr1_3:54650982-54651001 | Msa0125870:intron | 40.0% | |
| ! | ATTTTCCCATGCGGTGATTT+TGG | + | chr1_3:54651585-54651604 | None:intergenic | 40.0% |
| CGCATGGGAAAATTTGCAAA+AGG | - | chr1_3:54651592-54651611 | Msa0125870:intron | 40.0% | |
| AGCAGCAATACAGAAACTAG+AGG | - | chr1_3:54651625-54651644 | Msa0125870:intron | 40.0% | |
| GATGATCACTTGAGCTAGTA+GGG | + | chr1_3:54651690-54651709 | None:intergenic | 40.0% | |
| ! | ATTACTGTGGGCTGTCTAAT+AGG | - | chr1_3:54651951-54651970 | Msa0125870:CDS | 40.0% |
| AGAAAAAGGCTCAGGAAATG+AGG | - | chr1_3:54652221-54652240 | Msa0125870:CDS | 40.0% | |
| CATAACCTTGTGAGAAGTTC+TGG | + | chr1_3:54652281-54652300 | None:intergenic | 40.0% | |
| ! | AGAAGCTTAAAAGGCATGAC+AGG | + | chr1_3:54652350-54652369 | None:intergenic | 40.0% |
| CTAGCTTCACTTGAACAGAA+AGG | + | chr1_3:54652381-54652400 | None:intergenic | 40.0% | |
| CTTTCTGTTCAAGTGAAGCT+AGG | - | chr1_3:54652379-54652398 | Msa0125870:CDS | 40.0% | |
| ! | AGGAATCTGAAGCAGGAAAT+GGG | + | chr1_3:54652640-54652659 | None:intergenic | 40.0% |
| ! | AAGGAATCTGAAGCAGGAAA+TGG | + | chr1_3:54652641-54652660 | None:intergenic | 40.0% |
| ! | TAAGAGAAGGAATCTGAAGC+AGG | + | chr1_3:54652647-54652666 | None:intergenic | 40.0% |
| ACCAGGTTTCAGAAATCAGA+AGG | - | chr1_3:54652804-54652823 | Msa0125870:CDS | 40.0% | |
| !! | TCCTTCTGATTTCTGAAACC+TGG | + | chr1_3:54652808-54652827 | None:intergenic | 40.0% |
| TGAAGTACAAGCACTTTAGC+CGG | - | chr1_3:54652921-54652940 | Msa0125870:intron | 40.0% | |
| ! | ACAAGGCACTTAGATTCTAC+CGG | + | chr1_3:54652943-54652962 | None:intergenic | 40.0% |
| AATACAAACTCCCAAGGATG+AGG | + | chr1_3:54652968-54652987 | None:intergenic | 40.0% | |
| !! | TGCGTAACTTTGAGATGGAA+AGG | + | chr1_3:54653151-54653170 | None:intergenic | 40.0% |
| ! | AAGCATGCGTAACTTTGAGA+TGG | + | chr1_3:54653156-54653175 | None:intergenic | 40.0% |
| ATGAACTTGCAGCATTTGGC+AGG | - | chr1_3:54648991-54649010 | Msa0125870:three_prime_UTR | 45.0% | |
| ! | ATTTTGCTCCGAGTGAAAGC+TGG | - | chr1_3:54649025-54649044 | Msa0125870:three_prime_UTR | 45.0% |
| !!! | TTTTGATTCGGATCCGGATC+CGG | + | chr1_3:54649063-54649082 | None:intergenic | 45.0% |
| ! | CTTCGCGAAACTCTTTTCTC+TGG | - | chr1_3:54649132-54649151 | Msa0125870:three_prime_UTR | 45.0% |
| CATAGCTCCAACTAATCGAG+GGG | + | chr1_3:54649618-54649637 | None:intergenic | 45.0% | |
| TCAGACTAGGAAATCGGGAA+CGG | - | chr1_3:54649652-54649671 | Msa0125870:intron | 45.0% | |
| TAATTCGGAGTTCCAGGACT+CGG | + | chr1_3:54649704-54649723 | None:intergenic | 45.0% | |
| TGACGATAATTCGGAGTTCC+AGG | + | chr1_3:54649710-54649729 | None:intergenic | 45.0% | |
| !! | GGTGGTGTTGCAATGCAAAA+AGG | - | chr1_3:54649737-54649756 | Msa0125870:intron | 45.0% |
| !! | AGTTCTGAGCGAGTTGTAAG+TGG | - | chr1_3:54649764-54649783 | Msa0125870:three_prime_UTR | 45.0% |
| ! | GTTCTGAGCGAGTTGTAAGT+GGG | - | chr1_3:54649765-54649784 | Msa0125870:exon | 45.0% |
| TTCTGAGCGAGTTGTAAGTG+GGG | - | chr1_3:54649766-54649785 | Msa0125870:exon | 45.0% | |
| ! | CACCATTACCAACTTGCTTC+CGG | + | chr1_3:54649793-54649812 | None:intergenic | 45.0% |
| GAGAACGTTGCCGTCTAAAT+GGG | - | chr1_3:54649838-54649857 | Msa0125870:CDS | 45.0% | |
| TCCGCATCTTCCCATTTAGA+CGG | + | chr1_3:54649851-54649870 | None:intergenic | 45.0% | |
| !! | GGATTTTGAGTCCTGTTTCG+GGG | - | chr1_3:54649876-54649895 | Msa0125870:CDS | 45.0% |
| !! | GATTTTGAGTCCTGTTTCGG+GGG | - | chr1_3:54649877-54649896 | Msa0125870:CDS | 45.0% |
| !! | ATTTTGAGTCCTGTTTCGGG+GGG | - | chr1_3:54649878-54649897 | Msa0125870:CDS | 45.0% |
| GAATAATACGCAACACCAGG+TGG | + | chr1_3:54649974-54649993 | None:intergenic | 45.0% | |
| TATTCGTTGTATTCGCCTGC+AGG | - | chr1_3:54649989-54650008 | Msa0125870:intron | 45.0% | |
| CCATCAAAAAAGTGACCTGC+AGG | + | chr1_3:54650007-54650026 | None:intergenic | 45.0% | |
| !!! | CCTGCAGGTCACTTTTTTGA+TGG | - | chr1_3:54650004-54650023 | Msa0125870:intron | 45.0% |
| !!! | GCAGGTCACTTTTTTGATGG+AGG | - | chr1_3:54650007-54650026 | Msa0125870:intron | 45.0% |
| CTGTTAATGCCTCAGCTGAT+GGG | - | chr1_3:54650065-54650084 | Msa0125870:intron | 45.0% | |
| !! | AATAGTTCTGGTGGCAATGG+TGG | - | chr1_3:54650094-54650113 | Msa0125870:intron | 45.0% |
| TTAGCATAACAACCTCGGGA+AGG | + | chr1_3:54650208-54650227 | None:intergenic | 45.0% | |
| !! | ACGTTGGCTCCAATTTACAG+AGG | - | chr1_3:54650689-54650708 | Msa0125870:intron | 45.0% |
| TGAAACAGCAGGGGATACAT+TGG | + | chr1_3:54650745-54650764 | None:intergenic | 45.0% | |
| !! | TATCCCCTGCTGTTTCAAGA+AGG | - | chr1_3:54650748-54650767 | Msa0125870:intron | 45.0% |
| !! | ATCCCCTGCTGTTTCAAGAA+GGG | - | chr1_3:54650749-54650768 | Msa0125870:intron | 45.0% |
| TGTCCCTTCTTGAAACAGCA+GGG | + | chr1_3:54650755-54650774 | None:intergenic | 45.0% | |
| ATGTCCCTTCTTGAAACAGC+AGG | + | chr1_3:54650756-54650775 | None:intergenic | 45.0% | |
| !! | TGCTGTTTCAAGAAGGGACA+TGG | - | chr1_3:54650755-54650774 | Msa0125870:intron | 45.0% |
| AGAAGTCCTCATATTGGGAG+AGG | + | chr1_3:54650814-54650833 | None:intergenic | 45.0% | |
| AATGGATATCAGGGATGTGC+AGG | - | chr1_3:54650896-54650915 | Msa0125870:intron | 45.0% | |
| AACGTGTAACCATGACAAGG+TGG | - | chr1_3:54650925-54650944 | Msa0125870:intron | 45.0% | |
| TTTCTTGGACCACCTTGTCA+TGG | + | chr1_3:54650937-54650956 | None:intergenic | 45.0% | |
| AAGGTGGTCCAAGAAACACA+AGG | - | chr1_3:54650941-54650960 | Msa0125870:intron | 45.0% | |
| ! | GAATAGGGCCTTGTGTTTCT+TGG | + | chr1_3:54650952-54650971 | None:intergenic | 45.0% |
| AAACACAAGGCCCTATTCAC+TGG | - | chr1_3:54650954-54650973 | Msa0125870:intron | 45.0% | |
| CTGAACCTCTACCAGTGAAT+AGG | + | chr1_3:54650968-54650987 | None:intergenic | 45.0% | |
| CAGCACTCGATCTTCATCTT+GGG | - | chr1_3:54651019-54651038 | Msa0125870:intron | 45.0% | |
| AAGGGGGGAGTTAACTTCAA+CGG | + | chr1_3:54651206-54651225 | None:intergenic | 45.0% | |
| TCAAGGTAGCTCATGGCATT+TGG | + | chr1_3:54651245-54651264 | None:intergenic | 45.0% | |
| TTGTTTGTCCCAGGGCTAAA+AGG | - | chr1_3:54651552-54651571 | Msa0125870:intron | 45.0% | |
| TGTTTGTCCCAGGGCTAAAA+GGG | - | chr1_3:54651553-54651572 | Msa0125870:intron | 45.0% | |
| GGATGATCACTTGAGCTAGT+AGG | + | chr1_3:54651691-54651710 | None:intergenic | 45.0% | |
| AAAGAAGCGAGCATCTTCCA+TGG | - | chr1_3:54652168-54652187 | Msa0125870:CDS | 45.0% | |
| ATTCGCTCAGAAAAAGGCTC+AGG | - | chr1_3:54652213-54652232 | Msa0125870:CDS | 45.0% | |
| AGTTGCCAGAACTTCTCACA+AGG | - | chr1_3:54652273-54652292 | Msa0125870:CDS | 45.0% | |
| ! | GTTATGTCATTTCGGAGAGC+CGG | - | chr1_3:54652295-54652314 | Msa0125870:CDS | 45.0% |
| AACCACTCAAAGAACCCATC+TGG | + | chr1_3:54652321-54652340 | None:intergenic | 45.0% | |
| ! | GGAATCTGAAGCAGGAAATG+GGG | + | chr1_3:54652639-54652658 | None:intergenic | 45.0% |
| CTTGAGGCTATCAAAACCCA+TGG | + | chr1_3:54652684-54652703 | None:intergenic | 45.0% | |
| TTGCAGCATTTGGCAGGTCA+CGG | - | chr1_3:54648997-54649016 | Msa0125870:three_prime_UTR | 50.0% | |
| GGTTCTTCCCCTCGATTAGT+TGG | - | chr1_3:54649608-54649627 | Msa0125870:intron | 50.0% | |
| CAGACTAGGAAATCGGGAAC+GGG | - | chr1_3:54649653-54649672 | Msa0125870:intron | 50.0% | |
| ACTGGTACATTTCCGAGTCC+TGG | - | chr1_3:54649689-54649708 | Msa0125870:intron | 50.0% | |
| TCTGAGCGAGTTGTAAGTGG+GGG | - | chr1_3:54649767-54649786 | Msa0125870:exon | 50.0% | |
| GGAGAACGTTGCCGTCTAAA+TGG | - | chr1_3:54649837-54649856 | Msa0125870:CDS | 50.0% | |
| GCCGTCTAAATGGGAAGATG+CGG | - | chr1_3:54649847-54649866 | Msa0125870:CDS | 50.0% | |
| CTAAATGGGAAGATGCGGAG+AGG | - | chr1_3:54649852-54649871 | Msa0125870:CDS | 50.0% | |
| TTTCAGTTCCACAGCCACTG+AGG | - | chr1_3:54649918-54649937 | Msa0125870:CDS | 50.0% | |
| TTCGACTTAGGTCTCCTCAG+TGG | + | chr1_3:54649935-54649954 | None:intergenic | 50.0% | |
| AGGAGACCTAAGTCGAAGAG+TGG | - | chr1_3:54649938-54649957 | Msa0125870:CDS | 50.0% | |
| GCTGTTAATGCCTCAGCTGA+TGG | - | chr1_3:54650064-54650083 | Msa0125870:intron | 50.0% | |
| ATGCAAGGATCCGTTCGTGT+GGG | + | chr1_3:54650130-54650149 | None:intergenic | 50.0% | |
| GCTCGCTCAGTTAGTGTACA+TGG | - | chr1_3:54650151-54650170 | Msa0125870:intron | 50.0% | |
| CAACGATTGACCCTGCATCT+GGG | + | chr1_3:54650182-54650201 | None:intergenic | 50.0% | |
| TCAACGATTGACCCTGCATC+TGG | + | chr1_3:54650183-54650202 | None:intergenic | 50.0% | |
| !! | CAATCGTTGATTCCTTCCCG+AGG | - | chr1_3:54650193-54650212 | Msa0125870:intron | 50.0% |
| GTCCCTTCTTGAAACAGCAG+GGG | + | chr1_3:54650754-54650773 | None:intergenic | 50.0% | |
| CATGCTCCTCTCCCAATATG+AGG | - | chr1_3:54650805-54650824 | Msa0125870:intron | 50.0% | |
| AAGGCCCTATTCACTGGTAG+AGG | - | chr1_3:54650960-54650979 | Msa0125870:intron | 50.0% | |
| CCAAGATGAAGATCGAGTGC+TGG | + | chr1_3:54651021-54651040 | None:intergenic | 50.0% | |
| CCAGCACTCGATCTTCATCT+TGG | - | chr1_3:54651018-54651037 | Msa0125870:intron | 50.0% | |
| AGGGGGGAGTTAACTTCAAC+GGG | + | chr1_3:54651205-54651224 | None:intergenic | 50.0% | |
| TTAAGAGCAGAGCGAGAAGG+GGG | + | chr1_3:54651222-54651241 | None:intergenic | 50.0% | |
| GTTAAGAGCAGAGCGAGAAG+GGG | + | chr1_3:54651223-54651242 | None:intergenic | 50.0% | |
| GGTTAAGAGCAGAGCGAGAA+GGG | + | chr1_3:54651224-54651243 | None:intergenic | 50.0% | |
| TGGTTAAGAGCAGAGCGAGA+AGG | + | chr1_3:54651225-54651244 | None:intergenic | 50.0% | |
| AGGAAGCCAAAATCACCGCA+TGG | - | chr1_3:54651576-54651595 | Msa0125870:intron | 50.0% | |
| GGAAGCCAAAATCACCGCAT+GGG | - | chr1_3:54651577-54651596 | Msa0125870:intron | 50.0% | |
| GAGTTCAGTTTCAGTCGACC+AGG | - | chr1_3:54652243-54652262 | Msa0125870:CDS | 50.0% | |
| TTCTGGCAACTTGATGAGCC+TGG | + | chr1_3:54652264-54652283 | None:intergenic | 50.0% | |
| ACTCAAAGAACCCATCTGGC+CGG | + | chr1_3:54652317-54652336 | None:intergenic | 50.0% | |
| TGCCTTGTAGCCTCATCCTT+GGG | - | chr1_3:54652955-54652974 | Msa0125870:intron | 50.0% | |
| GGACCACTCCAGCTTTCACT+CGG | + | chr1_3:54649036-54649055 | None:intergenic | 55.0% | |
| AAGCTGGAGTGGTCCAGATC+CGG | - | chr1_3:54649041-54649060 | Msa0125870:three_prime_UTR | 55.0% | |
| ATCGGGAACGGGTACAGTGA+CGG | - | chr1_3:54649664-54649683 | Msa0125870:intron | 55.0% | |
| !! | GGCCGGAAGCAAGTTGGTAA+TGG | - | chr1_3:54649788-54649807 | Msa0125870:CDS | 55.0% |
| AATGGGAAGATGCGGAGAGG+TGG | - | chr1_3:54649855-54649874 | Msa0125870:CDS | 55.0% | |
| TTAGGTCTCCTCAGTGGCTG+TGG | + | chr1_3:54649929-54649948 | None:intergenic | 55.0% | |
| AGCGGACCACTCTTCGACTT+AGG | + | chr1_3:54649947-54649966 | None:intergenic | 55.0% | |
| AAGTCGAAGAGTGGTCCGCT+TGG | - | chr1_3:54649947-54649966 | Msa0125870:CDS | 55.0% | |
| ! | AGTTCTGGTGGCAATGGTGG+TGG | - | chr1_3:54650097-54650116 | Msa0125870:intron | 55.0% |
| CATGCAAGGATCCGTTCGTG+TGG | + | chr1_3:54650131-54650150 | None:intergenic | 55.0% | |
| CACACGAACGGATCCTTGCA+TGG | - | chr1_3:54650129-54650148 | Msa0125870:intron | 55.0% | |
| CTAACTGAGCGAGCCATGCA+AGG | + | chr1_3:54650145-54650164 | None:intergenic | 55.0% | |
| ACATGGATGCTCCCAGATGC+AGG | - | chr1_3:54650168-54650187 | Msa0125870:intron | 55.0% | |
| CATGGATGCTCCCAGATGCA+GGG | - | chr1_3:54650169-54650188 | Msa0125870:intron | 55.0% | |
| ! | AGGAGCATGAGCTACCCTCT+GGG | + | chr1_3:54650794-54650813 | None:intergenic | 55.0% |
| !! | AAATCTGTGACGGGCAGGGA+AGG | + | chr1_3:54650855-54650874 | None:intergenic | 55.0% |
| !! | CTGCAAATCTGTGACGGGCA+GGG | + | chr1_3:54650859-54650878 | None:intergenic | 55.0% |
| !! | TCTGCAAATCTGTGACGGGC+AGG | + | chr1_3:54650860-54650879 | None:intergenic | 55.0% |
| GGATATCAGGGATGTGCAGG+TGG | - | chr1_3:54650899-54650918 | Msa0125870:intron | 55.0% | |
| TAAGAGCAGAGCGAGAAGGG+GGG | + | chr1_3:54651221-54651240 | None:intergenic | 55.0% | |
| TTGTCCCAGGGCTAAAAGGG+AGG | - | chr1_3:54651556-54651575 | Msa0125870:intron | 55.0% | |
| ! | GCTTCCTCCCTTTTAGCCCT+GGG | + | chr1_3:54651563-54651582 | None:intergenic | 55.0% |
| ! | GGCCAGATGGGTTCTTTGAG+TGG | - | chr1_3:54652316-54652335 | Msa0125870:CDS | 55.0% |
| AGGCTGTTGCATGCTTGACC+AGG | - | chr1_3:54652787-54652806 | Msa0125870:CDS | 55.0% | |
| GTGCCTTGTAGCCTCATCCT+TGG | - | chr1_3:54652954-54652973 | Msa0125870:intron | 55.0% | |
| CTCCCAAGGATGAGGCTACA+AGG | + | chr1_3:54652960-54652979 | None:intergenic | 55.0% | |
| CAGCATTTGGCAGGTCACGG+TGG | - | chr1_3:54649000-54649019 | Msa0125870:three_prime_UTR | 60.0% | |
| GCTCCGAGTGAAAGCTGGAG+TGG | - | chr1_3:54649030-54649049 | Msa0125870:three_prime_UTR | 60.0% | |
| GAGTGGTCCAGATCCGGATC+CGG | - | chr1_3:54649047-54649066 | Msa0125870:three_prime_UTR | 60.0% | |
| TTCGGATCCGGATCCGGATC+TGG | + | chr1_3:54649057-54649076 | None:intergenic | 60.0% | |
| TCGGGAACGGGTACAGTGAC+GGG | - | chr1_3:54649665-54649684 | Msa0125870:intron | 60.0% | |
| AGCGAGTTGTAAGTGGGGGC+CGG | - | chr1_3:54649771-54649790 | Msa0125870:exon | 60.0% | |
| AGTCCTGTTTCGGGGGGTGA+TGG | - | chr1_3:54649884-54649903 | Msa0125870:CDS | 60.0% | |
| GTTCCATCACCCCCCGAAAC+AGG | + | chr1_3:54649890-54649909 | None:intergenic | 60.0% | |
| !! | GTTTCGGGGGGTGATGGAAC+TGG | - | chr1_3:54649890-54649909 | Msa0125870:CDS | 60.0% |
| !! | GGGGGGTGATGGAACTGGAA+GGG | - | chr1_3:54649895-54649914 | Msa0125870:CDS | 60.0% |
| GCAACACCAGGTGGACCAAG+CGG | + | chr1_3:54649965-54649984 | None:intergenic | 60.0% | |
| !! | TCTGGTGGCAATGGTGGTGG+AGG | - | chr1_3:54650100-54650119 | Msa0125870:intron | 60.0% |
| !! | CTGGTGGCAATGGTGGTGGA+GGG | - | chr1_3:54650101-54650120 | Msa0125870:intron | 60.0% |
| TGGAGGGCTTCCCACACGAA+CGG | - | chr1_3:54650117-54650136 | Msa0125870:intron | 60.0% | |
| GCAACCCAGATGAGCCCAGA+GGG | - | chr1_3:54650777-54650796 | Msa0125870:intron | 60.0% | |
| GCTACCCTCTGGGCTCATCT+GGG | + | chr1_3:54650784-54650803 | None:intergenic | 60.0% | |
| AGCTACCCTCTGGGCTCATC+TGG | + | chr1_3:54650785-54650804 | None:intergenic | 60.0% | |
| ! | GAGGAGCATGAGCTACCCTC+TGG | + | chr1_3:54650795-54650814 | None:intergenic | 60.0% |
| ! | GGCTTCCTCCCTTTTAGCCC+TGG | + | chr1_3:54651564-54651583 | None:intergenic | 60.0% |
| ATTTCGGAGAGCCGGCCAGA+TGG | - | chr1_3:54652303-54652322 | Msa0125870:CDS | 60.0% | |
| TTTCGGAGAGCCGGCCAGAT+GGG | - | chr1_3:54652304-54652323 | Msa0125870:CDS | 60.0% | |
| CGGGAACGGGTACAGTGACG+GGG | - | chr1_3:54649666-54649685 | Msa0125870:intron | 65.0% | |
| ! | ACGGGTACAGTGACGGGGAC+TGG | - | chr1_3:54649671-54649690 | Msa0125870:intron | 65.0% |
| AGTGGGGGCCGGAAGCAAGT+TGG | - | chr1_3:54649782-54649801 | Msa0125870:exon | 65.0% | |
| !! | CGGGGGGTGATGGAACTGGA+AGG | - | chr1_3:54649894-54649913 | Msa0125870:CDS | 65.0% |
| AGTGGTCCGCTTGGTCCACC+TGG | - | chr1_3:54649956-54649975 | Msa0125870:CDS | 65.0% | |
| GGCAACCCAGATGAGCCCAG+AGG | - | chr1_3:54650776-54650795 | Msa0125870:intron | 65.0% | |
| !! | TCTGTGACGGGCAGGGAAGG+TGG | + | chr1_3:54650852-54650871 | None:intergenic | 65.0% |
| GACGGGCAGGGAAGGTGGAG+TGG | + | chr1_3:54650847-54650866 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 54648952 | 54653195 | 54648952 | ID=Msa0125870;Name=Msa0125870 |
| chr1_3 | mRNA | 54648952 | 54653195 | 54648952 | ID=Msa0125870-mRNA-1;Parent=Msa0125870;Name=Msa0125870-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|1|0.85|1|0.83|0.71|7|424|560 |
| chr1_3 | exon | 54648952 | 54649338 | 54648952 | ID=Msa0125870-mRNA-1:exon:16873;Parent=Msa0125870-mRNA-1 |
| chr1_3 | exon | 54649747 | 54649990 | 54649747 | ID=Msa0125870-mRNA-1:exon:16872;Parent=Msa0125870-mRNA-1 |
| chr1_3 | exon | 54650501 | 54650582 | 54650501 | ID=Msa0125870-mRNA-1:exon:16871;Parent=Msa0125870-mRNA-1 |
| chr1_3 | exon | 54651075 | 54651438 | 54651075 | ID=Msa0125870-mRNA-1:exon:16870;Parent=Msa0125870-mRNA-1 |
| chr1_3 | exon | 54651933 | 54652646 | 54651933 | ID=Msa0125870-mRNA-1:exon:16869;Parent=Msa0125870-mRNA-1 |
| chr1_3 | exon | 54652754 | 54652846 | 54652754 | ID=Msa0125870-mRNA-1:exon:16868;Parent=Msa0125870-mRNA-1 |
| chr1_3 | exon | 54652973 | 54653195 | 54652973 | ID=Msa0125870-mRNA-1:exon:16867;Parent=Msa0125870-mRNA-1 |
| chr1_3 | CDS | 54652973 | 54653195 | 54652973 | ID=Msa0125870-mRNA-1:cds;Parent=Msa0125870-mRNA-1 |
| chr1_3 | CDS | 54652754 | 54652846 | 54652754 | ID=Msa0125870-mRNA-1:cds;Parent=Msa0125870-mRNA-1 |
| chr1_3 | CDS | 54651933 | 54652646 | 54651933 | ID=Msa0125870-mRNA-1:cds;Parent=Msa0125870-mRNA-1 |
| chr1_3 | CDS | 54651075 | 54651438 | 54651075 | ID=Msa0125870-mRNA-1:cds;Parent=Msa0125870-mRNA-1 |
| chr1_3 | CDS | 54650501 | 54650582 | 54650501 | ID=Msa0125870-mRNA-1:cds;Parent=Msa0125870-mRNA-1 |
| chr1_3 | CDS | 54649784 | 54649990 | 54649784 | ID=Msa0125870-mRNA-1:cds;Parent=Msa0125870-mRNA-1 |
| chr1_3 | three_prime_UTR | 54649747 | 54649783 | 54649747 | ID=Msa0125870-mRNA-1:three_prime_utr;Parent=Msa0125870-mRNA-1 |
| chr1_3 | three_prime_UTR | 54648952 | 54649338 | 54648952 | ID=Msa0125870-mRNA-1:three_prime_utr;Parent=Msa0125870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
