Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136080 | sp|Q9LJN4|BXL5_ARATH | 70.658 | 760 | 208 | 8 | 21 | 774 | 23 | 773 | 0.0 | 1115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136080 | G7IEW2 | 97.567 | 781 | 19 | 0 | 1 | 781 | 1 | 781 | 0.0 | 1580 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041730 | Msa0136080 | 0.818999 | 1.462251e-52 | -8.615850e-47 |
| Msa0136080 | Msa0136110 | 0.997981 | 2.193410e-253 | -8.615850e-47 |
| Msa0136080 | Msa0194280 | 0.812922 | 3.322887e-51 | -8.615850e-47 |
| Msa0136080 | Msa0314480 | 0.809146 | 2.185451e-50 | -8.615850e-47 |
| Msa0136080 | Msa0716560 | 0.849633 | 2.852261e-60 | -8.615850e-47 |
| Msa0136080 | Msa0757950 | 0.849956 | 2.316937e-60 | -8.615850e-47 |
| Msa0136080 | Msa0810480 | 0.860483 | 2.002031e-63 | -8.615850e-47 |
| Msa0136080 | Msa0825230 | 0.819499 | 1.124832e-52 | -8.615850e-47 |
| Msa0136080 | Msa1269080 | 0.853423 | 2.412630e-61 | -8.615850e-47 |
| Msa0136080 | Msa1344320 | 0.868909 | 4.599550e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136080 | MtrunA17_Chr1g0207281 | 97.567 | 781 | 19 | 0 | 1 | 781 | 17 | 797 | 0.0 | 1579 |
| Msa0136080 | MtrunA17_Chr2g0278761 | 55.906 | 762 | 317 | 8 | 5 | 759 | 16 | 765 | 0.0 | 867 |
| Msa0136080 | MtrunA17_Chr4g0050591 | 54.688 | 768 | 318 | 9 | 6 | 759 | 13 | 764 | 0.0 | 855 |
| Msa0136080 | MtrunA17_Chr1g0194841 | 54.222 | 758 | 334 | 6 | 3 | 759 | 2 | 747 | 0.0 | 844 |
| Msa0136080 | MtrunA17_Chr7g0269871 | 53.804 | 736 | 328 | 6 | 25 | 759 | 29 | 753 | 0.0 | 825 |
| Msa0136080 | MtrunA17_Chr2g0294751 | 53.197 | 735 | 328 | 5 | 25 | 759 | 28 | 746 | 0.0 | 809 |
| Msa0136080 | MtrunA17_Chr5g0425471 | 49.054 | 793 | 369 | 15 | 4 | 774 | 3 | 782 | 0.0 | 767 |
| Msa0136080 | MtrunA17_Chr5g0425431 | 49.737 | 760 | 360 | 13 | 24 | 774 | 34 | 780 | 0.0 | 759 |
| Msa0136080 | MtrunA17_Chr5g0411571 | 48.920 | 787 | 369 | 11 | 8 | 774 | 9 | 782 | 0.0 | 756 |
| Msa0136080 | MtrunA17_Chr3g0115601 | 50.067 | 749 | 347 | 11 | 25 | 759 | 31 | 766 | 0.0 | 755 |
| Msa0136080 | MtrunA17_Chr5g0425451 | 48.597 | 784 | 377 | 15 | 5 | 776 | 15 | 784 | 0.0 | 753 |
| Msa0136080 | MtrunA17_Chr5g0425531 | 48.120 | 798 | 372 | 16 | 4 | 774 | 3 | 785 | 0.0 | 742 |
| Msa0136080 | MtrunA17_Chr6g0461231 | 26.269 | 670 | 348 | 29 | 32 | 625 | 22 | 621 | 5.80e-37 | 147 |
| Msa0136080 | MtrunA17_Chr7g0253561 | 27.083 | 624 | 337 | 27 | 38 | 591 | 4 | 579 | 2.91e-35 | 142 |
| Msa0136080 | MtrunA17_Chr6g0461191 | 26.778 | 661 | 326 | 32 | 47 | 625 | 37 | 621 | 1.89e-34 | 140 |
| Msa0136080 | MtrunA17_Chr3g0118971 | 25.786 | 636 | 362 | 29 | 48 | 625 | 38 | 621 | 1.54e-32 | 134 |
| Msa0136080 | MtrunA17_Chr6g0461221 | 25.284 | 617 | 339 | 25 | 47 | 591 | 38 | 604 | 4.39e-32 | 133 |
| Msa0136080 | MtrunA17_Chr6g0461211 | 25.938 | 613 | 340 | 25 | 47 | 591 | 37 | 603 | 2.86e-30 | 127 |
| Msa0136080 | MtrunA17_Chr2g0292341 | 25.728 | 618 | 333 | 27 | 48 | 591 | 40 | 605 | 1.17e-29 | 125 |
| Msa0136080 | MtrunA17_Chr5g0429581 | 25.735 | 544 | 314 | 24 | 73 | 581 | 85 | 573 | 3.50e-27 | 117 |
| Msa0136080 | MtrunA17_Chr3g0104081 | 25.077 | 650 | 345 | 26 | 11 | 581 | 3 | 589 | 3.91e-27 | 117 |
| Msa0136080 | MtrunA17_Chr7g0253551 | 26.757 | 441 | 236 | 19 | 38 | 423 | 29 | 437 | 2.52e-25 | 110 |
| Msa0136080 | MtrunA17_Chr5g0429541 | 25.093 | 538 | 311 | 23 | 73 | 581 | 85 | 559 | 3.98e-25 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136080 | AT3G19620.1 | 70.658 | 760 | 208 | 8 | 21 | 774 | 23 | 773 | 0.0 | 1115 |
| Msa0136080 | AT5G64570.1 | 55.683 | 783 | 315 | 12 | 4 | 774 | 22 | 784 | 0.0 | 866 |
| Msa0136080 | AT5G09730.1 | 53.350 | 791 | 330 | 16 | 2 | 774 | 4 | 773 | 0.0 | 834 |
| Msa0136080 | AT1G02640.1 | 53.117 | 770 | 333 | 8 | 3 | 763 | 4 | 754 | 0.0 | 828 |
| Msa0136080 | AT5G49360.1 | 53.264 | 766 | 338 | 10 | 1 | 759 | 10 | 762 | 0.0 | 813 |
| Msa0136080 | AT5G10560.1 | 48.745 | 757 | 351 | 9 | 31 | 759 | 35 | 782 | 0.0 | 742 |
| Msa0136080 | AT1G78060.1 | 48.212 | 755 | 377 | 9 | 14 | 761 | 12 | 759 | 0.0 | 732 |
| Msa0136080 | AT5G64570.3 | 61.446 | 581 | 210 | 8 | 4 | 578 | 22 | 594 | 0.0 | 726 |
| Msa0136080 | AT5G64570.2 | 55.418 | 646 | 259 | 10 | 138 | 774 | 1 | 626 | 0.0 | 715 |
| Msa0136080 | AT5G09700.1 | 47.887 | 497 | 236 | 7 | 286 | 774 | 45 | 526 | 4.08e-157 | 468 |
| Msa0136080 | AT3G47040.4 | 25.571 | 657 | 364 | 30 | 38 | 628 | 10 | 607 | 2.48e-32 | 134 |
| Msa0136080 | AT3G47010.1 | 25.801 | 624 | 371 | 25 | 32 | 599 | 5 | 592 | 4.51e-32 | 132 |
| Msa0136080 | AT3G62710.1 | 27.036 | 614 | 348 | 31 | 45 | 624 | 101 | 648 | 5.42e-32 | 133 |
| Msa0136080 | AT3G47000.1 | 25.307 | 652 | 366 | 25 | 38 | 625 | 10 | 604 | 7.16e-32 | 132 |
| Msa0136080 | AT5G20950.2 | 25.309 | 648 | 357 | 28 | 48 | 629 | 36 | 622 | 1.40e-30 | 128 |
| Msa0136080 | AT5G20950.1 | 25.309 | 648 | 357 | 28 | 48 | 629 | 36 | 622 | 1.40e-30 | 128 |
| Msa0136080 | AT5G20950.3 | 25.309 | 648 | 357 | 28 | 48 | 629 | 114 | 700 | 2.08e-30 | 128 |
| Msa0136080 | AT3G47010.2 | 24.960 | 621 | 379 | 23 | 32 | 599 | 5 | 591 | 4.89e-30 | 126 |
| Msa0136080 | AT3G47050.1 | 25.980 | 612 | 364 | 24 | 35 | 591 | 7 | 584 | 1.13e-29 | 125 |
| Msa0136080 | AT5G04885.3 | 26.316 | 551 | 323 | 24 | 72 | 592 | 108 | 605 | 5.19e-29 | 124 |
| Msa0136080 | AT5G04885.1 | 26.316 | 551 | 323 | 24 | 72 | 592 | 108 | 605 | 5.19e-29 | 124 |
| Msa0136080 | AT5G04885.2 | 26.316 | 551 | 323 | 24 | 72 | 592 | 125 | 622 | 5.20e-29 | 124 |
| Msa0136080 | AT3G47040.1 | 25.037 | 683 | 360 | 32 | 38 | 628 | 10 | 632 | 8.86e-29 | 123 |
| Msa0136080 | AT3G47000.3 | 28.000 | 450 | 226 | 18 | 38 | 423 | 10 | 425 | 1.87e-27 | 117 |
| Msa0136080 | AT3G47040.3 | 27.169 | 438 | 245 | 18 | 38 | 423 | 10 | 425 | 3.12e-26 | 113 |
| Msa0136080 | AT5G20940.1 | 27.306 | 553 | 309 | 26 | 73 | 591 | 111 | 604 | 1.51e-25 | 112 |
| Msa0136080 | AT3G47010.4 | 27.540 | 443 | 249 | 18 | 32 | 423 | 5 | 426 | 8.89e-25 | 108 |
| Msa0136080 | AT3G47010.3 | 25.060 | 415 | 270 | 16 | 199 | 599 | 26 | 413 | 4.07e-20 | 94.4 |
| Msa0136080 | AT3G47050.2 | 26.133 | 375 | 219 | 14 | 35 | 365 | 7 | 367 | 1.25e-17 | 86.3 |
| Msa0136080 | AT3G47000.2 | 24.242 | 462 | 292 | 20 | 183 | 625 | 5 | 427 | 2.67e-17 | 85.9 |
Find 180 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGGCTGGTTTGACATTT+TGG | 0.130488 | 1_3:-67864296 | Msa0136080:CDS |
| CAGTAAAATAAAGTTGTTTC+TGG | 0.208407 | 1_3:-67861000 | Msa0136080:three_prime_UTR |
| GCAACATAGGAGGGATATTA+TGG | 0.220056 | 1_3:-67862371 | Msa0136080:CDS |
| TGAAACATTATGGTACAAAA+TGG | 0.221947 | 1_3:-67864361 | Msa0136080:CDS |
| CTGCTTATGATGTTGATAAT+TGG | 0.227264 | 1_3:-67864092 | Msa0136080:CDS |
| AGGGAAATTTCTACTGATAT+TGG | 0.228239 | 1_3:+67861633 | None:intergenic |
| GCCATAGCACAAGTAATATT+TGG | 0.228912 | 1_3:-67862318 | Msa0136080:CDS |
| GGGAAATCCCTCTATGAATT+TGG | 0.249033 | 1_3:-67861586 | Msa0136080:CDS |
| GTGTCATGTGCTCATATAAT+AGG | 0.254476 | 1_3:-67863791 | Msa0136080:CDS |
| GATTGTGGATACCATGTAAA+TGG | 0.264876 | 1_3:+67861697 | None:intergenic |
| TCCAACACACAGCTCTTAAA+TGG | 0.278527 | 1_3:+67863828 | None:intergenic |
| TTATTACCTTAGCATCAAAA+TGG | 0.295146 | 1_3:+67864052 | None:intergenic |
| CAAAGAAGCCAAGTCTCATT+AGG | 0.298010 | 1_3:+67862934 | None:intergenic |
| TGTCAAATTCAAACAACTTA+TGG | 0.308883 | 1_3:+67861429 | None:intergenic |
| AATCCTATCAATTGTTTCAA+TGG | 0.312892 | 1_3:+67861304 | None:intergenic |
| TAAAACCTGTATGTTCTTCC+AGG | 0.325928 | 1_3:+67861613 | None:intergenic |
| GCCCTTCTGCTTCTATAGAT+TGG | 0.325933 | 1_3:+67862529 | None:intergenic |
| GATAGTGAAGTGTTGCAAAA+TGG | 0.335511 | 1_3:+67864612 | None:intergenic |
| AGCCTTGAAATGCCGGTAGA+AGG | 0.350533 | 1_3:+67864519 | None:intergenic |
| GATTGGACAGCACACTATTC+TGG | 0.361517 | 1_3:-67861176 | Msa0136080:CDS |
| AGAGGCCAGTGGGGTCTAGA+TGG | 0.363411 | 1_3:-67863717 | Msa0136080:CDS |
| GTTCCATTGAAACAATTGAT+AGG | 0.364046 | 1_3:-67861307 | Msa0136080:CDS |
| CACCACATTGATATTACAAT+TGG | 0.364152 | 1_3:-67861124 | Msa0136080:CDS |
| GCAAGAGCCACTGCATCTTC+AGG | 0.368484 | 1_3:+67863190 | None:intergenic |
| GACTAAAATCAATGTTCCTT+TGG | 0.370514 | 1_3:+67862440 | None:intergenic |
| AGCTATGTACAATGTGGATT+TGG | 0.386393 | 1_3:-67864313 | Msa0136080:CDS |
| TTCTGGATCATTATAGTAGA+AGG | 0.386843 | 1_3:+67861517 | None:intergenic |
| AGAGTTAACTTGACATTGCC+TGG | 0.387425 | 1_3:-67862501 | Msa0136080:CDS |
| TTAGTGAAAGAAATATCAAT+TGG | 0.388314 | 1_3:+67862402 | None:intergenic |
| CCACTCACCACTTCTGAACT+TGG | 0.388607 | 1_3:+67861331 | None:intergenic |
| TTTGCAAATGGAAGTGACTT+TGG | 0.397416 | 1_3:+67862906 | None:intergenic |
| TTGCAAATGGAAGTGACTTT+GGG | 0.402569 | 1_3:+67862907 | None:intergenic |
| AACTCCAGGGGAAGATCCTT+TGG | 0.404077 | 1_3:-67864223 | Msa0136080:CDS |
| CATTACTATGTGGTAGTGTA+AGG | 0.406462 | 1_3:-67860956 | Msa0136080:three_prime_UTR |
| TGCTAAAGATGATAGGCTTA+AGG | 0.408182 | 1_3:-67864139 | Msa0136080:CDS |
| GATACAGTGGTGTTGGTTGT+TGG | 0.412529 | 1_3:-67862558 | Msa0136080:CDS |
| ACTGTGGTGGCATTTGCATT+TGG | 0.412568 | 1_3:+67862741 | None:intergenic |
| CTCATGTTCATGTCTGTCAT+TGG | 0.420175 | 1_3:+67861658 | None:intergenic |
| AAAGAGCACAAGTTAAGGTT+GGG | 0.420572 | 1_3:-67861279 | Msa0136080:CDS |
| ACAAGCTTCTCTTGAAATCC+AGG | 0.424917 | 1_3:+67862483 | None:intergenic |
| TCTACCGGCATTTCAAGGCT+TGG | 0.426574 | 1_3:-67864516 | Msa0136080:CDS |
| TAACCATAACTATAGTATAT+TGG | 0.429000 | 1_3:-67861050 | Msa0136080:three_prime_UTR |
| ACCCTTCTACCGGCATTTCA+AGG | 0.433066 | 1_3:-67864521 | Msa0136080:CDS |
| AGTGGTGTTGGTTGTTGGAT+TGG | 0.437442 | 1_3:-67862553 | Msa0136080:CDS |
| ACTTCTGTAGTCCTTGTAAA+GGG | 0.438650 | 1_3:+67862676 | None:intergenic |
| TACTTCTGTAGTCCTTGTAA+AGG | 0.441252 | 1_3:+67862675 | None:intergenic |
| CACTAAAGAAAATCAGCAAT+TGG | 0.455452 | 1_3:-67862862 | Msa0136080:CDS |
| ATTTGAAAGAGCACAAGTTA+AGG | 0.457325 | 1_3:-67861284 | Msa0136080:CDS |
| TTTGTGTTATGTTGGAGATA+TGG | 0.460291 | 1_3:+67864753 | None:intergenic |
| AAGCAAGTGCTAAAGATGAT+AGG | 0.460961 | 1_3:-67864146 | Msa0136080:CDS |
| TGCTCATATAATAGGGTGAA+TGG | 0.462881 | 1_3:-67863783 | Msa0136080:CDS |
| TTGGTGTTCCTGCTTATGAA+TGG | 0.463212 | 1_3:-67864497 | Msa0136080:CDS |
| ATTACACCTTGGAGAAGGTC+TGG | 0.463689 | 1_3:+67863741 | None:intergenic |
| GAAACATTATGGTACAAAAT+GGG | 0.466706 | 1_3:-67864360 | Msa0136080:CDS |
| GAAAGAGCACAAGTTAAGGT+TGG | 0.467163 | 1_3:-67861280 | Msa0136080:CDS |
| ATCTATAGAAGCAGAAGGGC+TGG | 0.468944 | 1_3:-67862526 | Msa0136080:CDS |
| TGTCATGTGCTCATATAATA+GGG | 0.473992 | 1_3:-67863790 | Msa0136080:CDS |
| AATCAGTTACAGCCTTACAT+AGG | 0.476657 | 1_3:+67860931 | None:intergenic |
| CAGGGACGCGTTTCGATAGC+AGG | 0.477482 | 1_3:-67864437 | Msa0136080:CDS |
| TAGTGTAAGGGCCCTATGTA+AGG | 0.478854 | 1_3:-67860943 | Msa0136080:three_prime_UTR |
| TCCCTCTATGAATTTGGCTA+TGG | 0.484680 | 1_3:-67861580 | Msa0136080:CDS |
| CTCTGCTGATACAGTGGTGT+TGG | 0.484940 | 1_3:-67862565 | Msa0136080:CDS |
| ATTTAAGAGCTGTGTGTTGG+AGG | 0.484967 | 1_3:-67863826 | Msa0136080:CDS |
| ACTAAAAGTGTAAGCAACAT+AGG | 0.484978 | 1_3:-67862384 | Msa0136080:CDS |
| TGACACTAAGTCCTTGGCTC+TGG | 0.485207 | 1_3:+67864581 | None:intergenic |
| TCACTTCCATTTGCAAACCT+TGG | 0.486006 | 1_3:-67862900 | Msa0136080:CDS |
| ATTTCCCTGGAAGAACATAC+AGG | 0.486697 | 1_3:-67861618 | Msa0136080:CDS |
| AACACCAAGCCTTGAAATGC+CGG | 0.491966 | 1_3:+67864512 | None:intergenic |
| TATGCTGTAAATTATGTTCG+TGG | 0.495123 | 1_3:-67864189 | Msa0136080:CDS |
| CAACATAGGAGGGATATTAT+GGG | 0.496768 | 1_3:-67862370 | Msa0136080:CDS |
| ATTGTGGATACCATGTAAAT+GGG | 0.498218 | 1_3:+67861698 | None:intergenic |
| CGATATTCAAGCCCTTTACA+AGG | 0.501394 | 1_3:-67862687 | Msa0136080:CDS |
| TCCAAATATTACTTGTGCTA+TGG | 0.501814 | 1_3:+67862317 | None:intergenic |
| TAGTGAAAGAAATATCAATT+GGG | 0.504026 | 1_3:+67862403 | None:intergenic |
| TCCATTTAAGAGCTGTGTGT+TGG | 0.505176 | 1_3:-67863829 | Msa0136080:CDS |
| ATGTACAATGTGGATTTGGC+TGG | 0.507340 | 1_3:-67864309 | Msa0136080:CDS |
| GATGGTCCAAGGTTTGCAAA+TGG | 0.509359 | 1_3:+67862894 | None:intergenic |
| GCCTTGAAATGCCGGTAGAA+GGG | 0.510160 | 1_3:+67864520 | None:intergenic |
| ATATTATGGGTAGGTTATCC+TGG | 0.512772 | 1_3:-67862357 | Msa0136080:CDS |
| CTTGTAAAGGGCTTGAATAT+CGG | 0.513958 | 1_3:+67862688 | None:intergenic |
| ATATTTGGAGACTATAACCC+AGG | 0.518089 | 1_3:-67862303 | Msa0136080:intron |
| CTGCTATCGAAACGCGTCCC+TGG | 0.518333 | 1_3:+67864438 | None:intergenic |
| ATACCAATATACTATAGTTA+TGG | 0.520437 | 1_3:+67861047 | None:intergenic |
| GCAGGTGACAAAGCAAGACT+TGG | 0.520570 | 1_3:-67863868 | Msa0136080:intron |
| TCTTTAGTGCATACATCAGA+TGG | 0.520982 | 1_3:+67862876 | None:intergenic |
| TGGTGGTCAGAGGCACTTCA+TGG | 0.521560 | 1_3:-67864477 | Msa0136080:CDS |
| GGTGACAAAGCAAGACTTGG+AGG | 0.523632 | 1_3:-67863865 | Msa0136080:CDS |
| CGTTTCGATAGCAGGGTACC+TGG | 0.524275 | 1_3:-67864429 | Msa0136080:CDS |
| TCAAGGAAGATATTATTAAG+TGG | 0.524739 | 1_3:+67861475 | None:intergenic |
| TATCAATTGCTTGATCATCA+AGG | 0.526561 | 1_3:+67861458 | None:intergenic |
| GGTAAACGAAAGTTGGTGAT+TGG | 0.526693 | 1_3:-67861193 | Msa0136080:CDS |
| GTGGCTCTTGCACTGAAAGC+AGG | 0.529634 | 1_3:-67863178 | Msa0136080:intron |
| TGTAGTTGTATACCAGGGCT+TGG | 0.535216 | 1_3:+67862961 | None:intergenic |
| GGACTATGTAGTTGTATACC+AGG | 0.535357 | 1_3:+67862955 | None:intergenic |
| ATCAGTTACAGCCTTACATA+GGG | 0.538855 | 1_3:+67860932 | None:intergenic |
| CTTCATGGTGTCTCAAATGT+AGG | 0.539417 | 1_3:-67864462 | Msa0136080:CDS |
| AATATCAGTAGAAATTTCCC+TGG | 0.539925 | 1_3:-67861631 | Msa0136080:CDS |
| GGGCGTGGACAAGAAACTCC+AGG | 0.541036 | 1_3:-67864237 | Msa0136080:CDS |
| TTTAAGAGCTGTGTGTTGGA+GGG | 0.541333 | 1_3:-67863825 | Msa0136080:CDS |
| GTTCGTGGACTACAAGAAGT+TGG | 0.541602 | 1_3:-67864174 | Msa0136080:CDS |
| GGCAGCCTCTGCTGATACAG+TGG | 0.544457 | 1_3:-67862571 | Msa0136080:CDS |
| AGAAGGAGCAGATGCTATGT+GGG | 0.551576 | 1_3:+67861534 | None:intergenic |
| ACCACATGAGATCCATCAAA+AGG | 0.551827 | 1_3:+67861373 | None:intergenic |
| ATAATTGGAAAGGCGTTGAT+CGG | 0.552315 | 1_3:-67864077 | Msa0136080:CDS |
| GGACAGCACACTATTCTGGT+TGG | 0.552636 | 1_3:-67861172 | Msa0136080:CDS |
| ATCCATAGCCAAATTCATAG+AGG | 0.557580 | 1_3:+67861578 | None:intergenic |
| TAAGCGTGACACTAAGTCCT+TGG | 0.559465 | 1_3:+67864575 | None:intergenic |
| GTTATGATTAGTAACTATGC+TGG | 0.561465 | 1_3:-67862720 | Msa0136080:CDS |
| CTCTGATTACACCTTGGAGA+AGG | 0.562519 | 1_3:+67863736 | None:intergenic |
| GAGGCCAGTGGGGTCTAGAT+GGG | 0.564760 | 1_3:-67863716 | Msa0136080:intron |
| GCAGCTGATAGTATCACTGC+TGG | 0.566392 | 1_3:+67864393 | None:intergenic |
| TAAAATAAAGTTGTTTCTGG+AGG | 0.569057 | 1_3:-67860997 | Msa0136080:three_prime_UTR |
| AAAACCTGTATGTTCTTCCA+GGG | 0.569628 | 1_3:+67861614 | None:intergenic |
| CTCACCACTTCTGAACTTGG+TGG | 0.569744 | 1_3:+67861334 | None:intergenic |
| TCTGACCACCATTCATAAGC+AGG | 0.570631 | 1_3:+67864489 | None:intergenic |
| TGTTTCAGACTGTGATTCAG+TGG | 0.570986 | 1_3:-67863248 | Msa0136080:CDS |
| GCTCTAGAAGCTGCGAAGCA+AGG | 0.571329 | 1_3:-67862840 | Msa0136080:CDS |
| GGTGTCTCAAATGTAGGACC+AGG | 0.572126 | 1_3:-67864456 | Msa0136080:CDS |
| GTGTTCCTGCTTATGAATGG+TGG | 0.572399 | 1_3:-67864494 | Msa0136080:CDS |
| TGCATACATCAGATGGTCCA+AGG | 0.572554 | 1_3:+67862883 | None:intergenic |
| AAAAGTGTAAGCAACATAGG+AGG | 0.573233 | 1_3:-67862381 | Msa0136080:CDS |
| AGGTGTAATCAGAGGCCAGT+GGG | 0.573573 | 1_3:-67863727 | Msa0136080:CDS |
| GTAGGTTATCCTGGTCAAGA+TGG | 0.574821 | 1_3:-67862348 | Msa0136080:CDS |
| TACATAGTCCTAATGAGACT+TGG | 0.576502 | 1_3:-67862942 | Msa0136080:CDS |
| TAGAAGGAGCAGATGCTATG+TGG | 0.577310 | 1_3:+67861533 | None:intergenic |
| TCCATAGCCAAATTCATAGA+GGG | 0.577492 | 1_3:+67861579 | None:intergenic |
| TAGTGATGGTAAACGAAAGT+TGG | 0.578355 | 1_3:-67861200 | Msa0136080:CDS |
| GGAGCCACCAAGTTCAGAAG+TGG | 0.580834 | 1_3:-67861338 | Msa0136080:CDS |
| ATCTATTGTAGACCAAGCCC+TGG | 0.580878 | 1_3:-67862973 | Msa0136080:CDS |
| CAAATTCAAACAACTTATGG+TGG | 0.582768 | 1_3:+67861432 | None:intergenic |
| GCATTTCCTCCATCTTGACC+AGG | 0.588584 | 1_3:+67862339 | None:intergenic |
| ATTACTATGTGGTAGTGTAA+GGG | 0.592903 | 1_3:-67860955 | Msa0136080:three_prime_UTR |
| GTGGTAGGTCCCCATTTACA+TGG | 0.594929 | 1_3:-67861708 | Msa0136080:CDS |
| CAACTAGTAAACCCTTCTAC+CGG | 0.596049 | 1_3:-67864531 | Msa0136080:CDS |
| ACAACCAAAGGATCTTCCCC+TGG | 0.596108 | 1_3:+67864219 | None:intergenic |
| GGCGTGGACAAGAAACTCCA+GGG | 0.596923 | 1_3:-67864236 | Msa0136080:CDS |
| GACCAATCTATAGAAGCAGA+AGG | 0.600841 | 1_3:-67862531 | Msa0136080:CDS |
| TGCTATGTGGGTAGAGAATG+TGG | 0.601022 | 1_3:+67861546 | None:intergenic |
| CTAAGTAATGTTGATAGTGA+TGG | 0.602583 | 1_3:-67861214 | Msa0136080:CDS |
| TGCTTATGAATGGTGGTCAG+AGG | 0.605760 | 1_3:-67864487 | Msa0136080:CDS |
| ATCTTATGAAACCAGAGCCA+AGG | 0.606136 | 1_3:-67864592 | Msa0136080:CDS |
| TCTTCAGTAACTTACGCGCA+TGG | 0.611081 | 1_3:-67862648 | Msa0136080:CDS |
| AAAGTGTAAGCAACATAGGA+GGG | 0.615065 | 1_3:-67862380 | Msa0136080:CDS |
| TATGATGTTGATAATTGGAA+AGG | 0.616039 | 1_3:-67864087 | Msa0136080:CDS |
| GTTTCTGGAGGTGATGAGCA+TGG | 0.620873 | 1_3:-67860985 | Msa0136080:three_prime_UTR |
| AGGTCTGGATCAGCACATGT+AGG | 0.621412 | 1_3:+67863756 | None:intergenic |
| AAAGACTCCTGAAGATGCAG+TGG | 0.622680 | 1_3:-67863197 | Msa0136080:CDS |
| GTGATTGGTGTGAAGAACAA+TGG | 0.624345 | 1_3:-67861397 | Msa0136080:CDS |
| GATGTGGCTGCTGCTACCAA+AGG | 0.627255 | 1_3:-67862456 | Msa0136080:CDS |
| GGTTATCCTGGTCAAGATGG+AGG | 0.630089 | 1_3:-67862345 | Msa0136080:CDS |
| GTTACTAATCATAACTGTGG+TGG | 0.637990 | 1_3:+67862728 | None:intergenic |
| ACTGGCCTCTGATTACACCT+TGG | 0.640961 | 1_3:+67863730 | None:intergenic |
| CATTGATATTACAATTGGAG+AGG | 0.641938 | 1_3:-67861119 | Msa0136080:CDS |
| CTTCTCCAAGGTGTAATCAG+AGG | 0.642134 | 1_3:-67863735 | Msa0136080:CDS |
| CAAACCCATCTAGACCCCAC+TGG | 0.647961 | 1_3:+67863712 | None:intergenic |
| ACTTGATCGACATATGATTG+TGG | 0.652204 | 1_3:+67861682 | None:intergenic |
| GCTGGAAAGCTAGTAGCACC+AGG | 0.654050 | 1_3:+67864411 | None:intergenic |
| AACACACAGCTCTTAAATGG+AGG | 0.654259 | 1_3:+67863831 | None:intergenic |
| GCTGATCCAGACCTTCTCCA+AGG | 0.658385 | 1_3:-67863747 | Msa0136080:CDS |
| ATAGGAGGGATATTATGGGT+AGG | 0.660257 | 1_3:-67862366 | Msa0136080:CDS |
| ACCAATCTATAGAAGCAGAA+GGG | 0.660435 | 1_3:-67862530 | Msa0136080:CDS |
| GACTATGTAGTTGTATACCA+GGG | 0.665456 | 1_3:+67862956 | None:intergenic |
| CCAAGTTCAGAAGTGGTGAG+TGG | 0.668174 | 1_3:-67861331 | Msa0136080:CDS |
| AGCTAGAGCTATGTACAATG+TGG | 0.670531 | 1_3:-67864319 | Msa0136080:CDS |
| TACATGATAACAGTAGCTAG+TGG | 0.672904 | 1_3:+67861024 | None:intergenic |
| CTCCAATTGTAATATCAATG+TGG | 0.675550 | 1_3:+67861122 | None:intergenic |
| CAACACCACTGTATCAGCAG+AGG | 0.676614 | 1_3:+67862566 | None:intergenic |
| AAAGGGCTTGAATATCGGCA+TGG | 0.678069 | 1_3:+67862693 | None:intergenic |
| ATAGTTACTAATCATAACTG+TGG | 0.682010 | 1_3:+67862725 | None:intergenic |
| AGGGACGCGTTTCGATAGCA+GGG | 0.694015 | 1_3:-67864436 | Msa0136080:CDS |
| AAGGTGTAATCAGAGGCCAG+TGG | 0.694576 | 1_3:-67863728 | Msa0136080:CDS |
| GCATATCTAGAAACAACCAA+AGG | 0.695865 | 1_3:+67864207 | None:intergenic |
| ATGGTGGTAACATTACTATG+TGG | 0.697084 | 1_3:-67860966 | Msa0136080:three_prime_UTR |
| GCGTGGACAAGAAACTCCAG+GGG | 0.698903 | 1_3:-67864235 | Msa0136080:CDS |
| GTGTCTCAAATGTAGGACCA+GGG | 0.699223 | 1_3:-67864455 | Msa0136080:CDS |
| AGAGAAGCTTGTGAAAGATG+TGG | 0.705643 | 1_3:-67862472 | Msa0136080:CDS |
| GGTGTAATCAGAGGCCAGTG+GGG | 0.715668 | 1_3:-67863726 | Msa0136080:CDS |
| TTGTGGATACCATGTAAATG+GGG | 0.746412 | 1_3:+67861699 | None:intergenic |
| GCAGGTTTAAACATGAACTG+CGG | 0.750864 | 1_3:-67863050 | Msa0136080:intron |
| TCTGGAGGTGATGAGCATGG+TGG | 0.795406 | 1_3:-67860982 | Msa0136080:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATCTTAGTTTTTGATAA+AGG | + | chr1_3:67862850-67862869 | None:intergenic | 15.0% |
| !! | AAAAACTAAGATAAAAACTT+TGG | - | chr1_3:67862855-67862874 | Msa0136080:CDS | 15.0% |
| !! | AAATATGTAAAGATAAATGT+AGG | + | chr1_3:67863381-67863400 | None:intergenic | 15.0% |
| !!! | GCTATTATAAATTGATAATT+AGG | + | chr1_3:67863603-67863622 | None:intergenic | 15.0% |
| !! | AAAATAAAAGTTTATGTGTT+TGG | + | chr1_3:67863822-67863841 | None:intergenic | 15.0% |
| !!! | ACAGTGAAAATTTTATTTAT+AGG | - | chr1_3:67863900-67863919 | Msa0136080:intron | 15.0% |
| !!! | CTAGTTTTAATGAAACATTA+TGG | - | chr1_3:67861259-67861278 | Msa0136080:CDS | 20.0% |
| !! | GTAAAAATATTTAACACGTT+CGG | + | chr1_3:67861694-67861713 | None:intergenic | 20.0% |
| !! | AAAAATCAAATGATTGCTTA+GGG | + | chr1_3:67861951-67861970 | None:intergenic | 20.0% |
| !! | AAAAAATCAAATGATTGCTT+AGG | + | chr1_3:67861952-67861971 | None:intergenic | 20.0% |
| !! | TCAACTAAATCCTATATTTA+GGG | + | chr1_3:67862063-67862082 | None:intergenic | 20.0% |
| !! | TTGACTAAATTACTAGAATT+TGG | - | chr1_3:67862079-67862098 | Msa0136080:intron | 20.0% |
| !!! | AATTAGTAGTATTGTTTTAC+AGG | - | chr1_3:67862134-67862153 | Msa0136080:intron | 20.0% |
| !! | TCTATCATAGTATTTATTAC+AGG | - | chr1_3:67862177-67862196 | Msa0136080:intron | 20.0% |
| !!! | CAAAAAAGTATAAGATATCA+GGG | + | chr1_3:67862351-67862370 | None:intergenic | 20.0% |
| !!! | TCAAAAAAGTATAAGATATC+AGG | + | chr1_3:67862352-67862371 | None:intergenic | 20.0% |
| !! | TATTGGATTATTAAATGGTA+TGG | - | chr1_3:67862544-67862563 | Msa0136080:CDS | 20.0% |
| !!! | AACATTGATTTTAGTCATAA+TGG | - | chr1_3:67863197-67863216 | Msa0136080:CDS | 20.0% |
| !! | TAGTGAAAGAAATATCAATT+GGG | + | chr1_3:67863230-67863249 | None:intergenic | 20.0% |
| !! | TTAGTGAAAGAAATATCAAT+TGG | + | chr1_3:67863231-67863250 | None:intergenic | 20.0% |
| !!! | AATGTTTTTTTAACTGTCAT+AGG | + | chr1_3:67863409-67863428 | None:intergenic | 20.0% |
| !! | TTGATTCATAAAAATCAGTT+TGG | - | chr1_3:67863636-67863655 | Msa0136080:intron | 20.0% |
| !!! | GTGAAAATTTTATTTATAGG+TGG | - | chr1_3:67863903-67863922 | Msa0136080:intron | 20.0% |
| !!! | AAATTTTATTTATAGGTGGT+AGG | - | chr1_3:67863907-67863926 | Msa0136080:intron | 20.0% |
| !!! | ATTATTAAGTGGTTTTGAAA+TGG | + | chr1_3:67864147-67864166 | None:intergenic | 20.0% |
| !! | TAACCATAACTATAGTATAT+TGG | - | chr1_3:67864580-67864599 | Msa0136080:CDS | 20.0% |
| !! | ATACCAATATACTATAGTTA+TGG | + | chr1_3:67864586-67864605 | None:intergenic | 20.0% |
| !!! | TTACAAGTTTTGTGTTATGT+TGG | + | chr1_3:67860888-67860907 | None:intergenic | 25.0% |
| ! | TGAAACATTATGGTACAAAA+TGG | - | chr1_3:67861269-67861288 | Msa0136080:CDS | 25.0% |
| ! | GAAACATTATGGTACAAAAT+GGG | - | chr1_3:67861270-67861289 | Msa0136080:CDS | 25.0% |
| !!! | TATGATGTTGATAATTGGAA+AGG | - | chr1_3:67861543-67861562 | Msa0136080:CDS | 25.0% |
| ! | TTATTACCTTAGCATCAAAA+TGG | + | chr1_3:67861581-67861600 | None:intergenic | 25.0% |
| ! | TATCACCATGTAGATATTTA+CGG | - | chr1_3:67861731-67861750 | Msa0136080:intron | 25.0% |
| ! | TAGTTTATCATAGCTATCAT+AGG | + | chr1_3:67862026-67862045 | None:intergenic | 25.0% |
| ! | GTCAACTAAATCCTATATTT+AGG | + | chr1_3:67862064-67862083 | None:intergenic | 25.0% |
| ! | ATTACTAGAATTTGGAAAGT+TGG | - | chr1_3:67862087-67862106 | Msa0136080:intron | 25.0% |
| ! | TTTATTACAGGTTGTAGAAA+AGG | - | chr1_3:67862189-67862208 | Msa0136080:intron | 25.0% |
| ! | ACTGCAAAAAAAATTCTGAT+TGG | - | chr1_3:67862499-67862518 | Msa0136080:CDS | 25.0% |
| ! | CTGCAAAAAAAATTCTGATT+GGG | - | chr1_3:67862500-67862519 | Msa0136080:CDS | 25.0% |
| ! | AATAAAGTTATGACTGGTAT+TGG | - | chr1_3:67862527-67862546 | Msa0136080:CDS | 25.0% |
| !! | ACTGGTATTGGATTATTAAA+TGG | - | chr1_3:67862539-67862558 | Msa0136080:CDS | 25.0% |
| ! | ATAGTTACTAATCATAACTG+TGG | + | chr1_3:67862908-67862927 | None:intergenic | 25.0% |
| ! | TTTAATAGAAAGCTATACCT+GGG | + | chr1_3:67863347-67863366 | None:intergenic | 25.0% |
| !!! | TACAATTCGGTTTTATGTAA+AGG | - | chr1_3:67863669-67863688 | Msa0136080:intron | 25.0% |
| !! | TGTTTATATTTGAGACCATA+AGG | + | chr1_3:67863768-67863787 | None:intergenic | 25.0% |
| ! | TTATGTGTTTGGTATAAACT+TGG | + | chr1_3:67863811-67863830 | None:intergenic | 25.0% |
| ! | TCAAGGAAGATATTATTAAG+TGG | + | chr1_3:67864158-67864177 | None:intergenic | 25.0% |
| ! | TGTCAAATTCAAACAACTTA+TGG | + | chr1_3:67864204-67864223 | None:intergenic | 25.0% |
| ! | AATCCTATCAATTGTTTCAA+TGG | + | chr1_3:67864329-67864348 | None:intergenic | 25.0% |
| !! | CAGTAAAATAAAGTTGTTTC+TGG | - | chr1_3:67864630-67864649 | Msa0136080:CDS | 25.0% |
| !!! | TAAAATAAAGTTGTTTCTGG+AGG | - | chr1_3:67864633-67864652 | Msa0136080:CDS | 25.0% |
| TTTGTGTTATGTTGGAGATA+TGG | + | chr1_3:67860880-67860899 | None:intergenic | 30.0% | |
| !! | GCATGTTTTTGACTAGTAAT+TGG | + | chr1_3:67860964-67860983 | None:intergenic | 30.0% |
| !!! | AATGGAAAGTTGCTAGTTTT+AGG | + | chr1_3:67861003-67861022 | None:intergenic | 30.0% |
| TATGCTGTAAATTATGTTCG+TGG | - | chr1_3:67861441-67861460 | Msa0136080:CDS | 30.0% | |
| !! | CTGCTTATGATGTTGATAAT+TGG | - | chr1_3:67861538-67861557 | Msa0136080:CDS | 30.0% |
| TGGCAGCATATTAAATTTCA+TGG | + | chr1_3:67861620-67861639 | None:intergenic | 30.0% | |
| ! | TCCAATTGCTTATGCATTTT+TGG | + | chr1_3:67861640-67861659 | None:intergenic | 30.0% |
| TCTACATGGTGATATATGAT+TGG | + | chr1_3:67861725-67861744 | None:intergenic | 30.0% | |
| AATCTCCGTAAATATCTACA+TGG | + | chr1_3:67861739-67861758 | None:intergenic | 30.0% | |
| TGTCATGTGCTCATATAATA+GGG | - | chr1_3:67861840-67861859 | Msa0136080:intron | 30.0% | |
| ! | TTAAGTTAGCTTGACATGTA+AGG | + | chr1_3:67861977-67861996 | None:intergenic | 30.0% |
| CATAGCTATCATAGGTATAA+AGG | + | chr1_3:67862018-67862037 | None:intergenic | 30.0% | |
| CTATCTTAGTCCCTAAATAT+AGG | - | chr1_3:67862050-67862069 | Msa0136080:intron | 30.0% | |
| ACGCAGTTGAAAATTTGAAA+CGG | - | chr1_3:67862253-67862272 | Msa0136080:intron | 30.0% | |
| TGAAACGGTGTCTTATAAAA+AGG | - | chr1_3:67862268-67862287 | Msa0136080:intron | 30.0% | |
| GAAACGGTGTCTTATAAAAA+GGG | - | chr1_3:67862269-67862288 | Msa0136080:intron | 30.0% | |
| GTGTCTTATAAAAAGGGATA+AGG | - | chr1_3:67862275-67862294 | Msa0136080:intron | 30.0% | |
| GGAAGAAATAAAGTTATGAC+TGG | - | chr1_3:67862521-67862540 | Msa0136080:CDS | 30.0% | |
| CACTAAAGAAAATCAGCAAT+TGG | - | chr1_3:67862768-67862787 | Msa0136080:CDS | 30.0% | |
| ! | GTTTTGCTTGAAAACAACAA+AGG | - | chr1_3:67862817-67862836 | Msa0136080:CDS | 30.0% |
| ATAAAAACTTTGGCTGTGAT+TGG | - | chr1_3:67862865-67862884 | Msa0136080:CDS | 30.0% | |
| GTTATGATTAGTAACTATGC+TGG | - | chr1_3:67862910-67862929 | Msa0136080:CDS | 30.0% | |
| GACTAAAATCAATGTTCCTT+TGG | + | chr1_3:67863193-67863212 | None:intergenic | 30.0% | |
| ! | ACTAAAAGTGTAAGCAACAT+AGG | - | chr1_3:67863246-67863265 | Msa0136080:CDS | 30.0% |
| TCCAAATATTACTTGTGCTA+TGG | + | chr1_3:67863316-67863335 | None:intergenic | 30.0% | |
| GTTTAATAGAAAGCTATACC+TGG | + | chr1_3:67863348-67863367 | None:intergenic | 30.0% | |
| AAAAATCAAACGATGACGAA+TGG | + | chr1_3:67863528-67863547 | None:intergenic | 30.0% | |
| ! | CTCTAACATTCGATTTGATT+TGG | - | chr1_3:67863555-67863574 | Msa0136080:intron | 30.0% |
| TGGTTCGAAAAACTACAATT+CGG | - | chr1_3:67863656-67863675 | Msa0136080:intron | 30.0% | |
| !! | GGTTTTATGTAAAGGTAGTT+CGG | - | chr1_3:67863677-67863696 | Msa0136080:intron | 30.0% |
| TAATGTTACCACATACCTTA+TGG | - | chr1_3:67863750-67863769 | Msa0136080:CDS | 30.0% | |
| ! | TTATATTTGAGACTTGAGAC+CGG | - | chr1_3:67863844-67863863 | Msa0136080:CDS | 30.0% |
| ! | AATTTTCACTGTTAGTCCAA+AGG | + | chr1_3:67863892-67863911 | None:intergenic | 30.0% |
| ATTGTGGATACCATGTAAAT+GGG | + | chr1_3:67863935-67863954 | None:intergenic | 30.0% | |
| AGGGAAATTTCTACTGATAT+TGG | + | chr1_3:67864000-67864019 | None:intergenic | 30.0% | |
| AATATCAGTAGAAATTTCCC+TGG | - | chr1_3:67863999-67864018 | Msa0136080:intron | 30.0% | |
| ! | AGAACATACAGGTTTTACAA+TGG | - | chr1_3:67864023-67864042 | Msa0136080:intron | 30.0% |
| ! | GAACATACAGGTTTTACAAT+GGG | - | chr1_3:67864024-67864043 | Msa0136080:intron | 30.0% |
| TTCTGGATCATTATAGTAGA+AGG | + | chr1_3:67864116-67864135 | None:intergenic | 30.0% | |
| ! | TTGAAATGGATGTGTTTTTC+TGG | + | chr1_3:67864133-67864152 | None:intergenic | 30.0% |
| TATCAATTGCTTGATCATCA+AGG | + | chr1_3:67864175-67864194 | None:intergenic | 30.0% | |
| CAAATTCAAACAACTTATGG+TGG | + | chr1_3:67864201-67864220 | None:intergenic | 30.0% | |
| GTTCCATTGAAACAATTGAT+AGG | - | chr1_3:67864323-67864342 | Msa0136080:CDS | 30.0% | |
| ! | ATTTGAAAGAGCACAAGTTA+AGG | - | chr1_3:67864346-67864365 | Msa0136080:CDS | 30.0% |
| !! | CTAAGTAATGTTGATAGTGA+TGG | - | chr1_3:67864416-67864435 | Msa0136080:CDS | 30.0% |
| CACCACATTGATATTACAAT+TGG | - | chr1_3:67864506-67864525 | Msa0136080:CDS | 30.0% | |
| CTCCAATTGTAATATCAATG+TGG | + | chr1_3:67864511-67864530 | None:intergenic | 30.0% | |
| CATTGATATTACAATTGGAG+AGG | - | chr1_3:67864511-67864530 | Msa0136080:CDS | 30.0% | |
| ! | ATTACTATGTGGTAGTGTAA+GGG | - | chr1_3:67864675-67864694 | Msa0136080:CDS | 30.0% |
| CAAAAACATGCATGTGACAA+AGG | - | chr1_3:67860973-67860992 | Msa0136080:three_prime_UTR | 35.0% | |
| !! | GATAGTGAAGTGTTGCAAAA+TGG | + | chr1_3:67861021-67861040 | None:intergenic | 35.0% |
| AGCTATGTACAATGTGGATT+TGG | - | chr1_3:67861317-67861336 | Msa0136080:CDS | 35.0% | |
| !!! | ATTTGGCTGGTTTGACATTT+TGG | - | chr1_3:67861334-67861353 | Msa0136080:CDS | 35.0% |
| CGCGAAAAACATTCACATTA+GGG | + | chr1_3:67861362-67861381 | None:intergenic | 35.0% | |
| TCGCGAAAAACATTCACATT+AGG | + | chr1_3:67861363-67861382 | None:intergenic | 35.0% | |
| GCATATCTAGAAACAACCAA+AGG | + | chr1_3:67861426-67861445 | None:intergenic | 35.0% | |
| AAGCAAGTGCTAAAGATGAT+AGG | - | chr1_3:67861484-67861503 | Msa0136080:CDS | 35.0% | |
| TGCTAAAGATGATAGGCTTA+AGG | - | chr1_3:67861491-67861510 | Msa0136080:CDS | 35.0% | |
| !! | ATAATTGGAAAGGCGTTGAT+CGG | - | chr1_3:67861553-67861572 | Msa0136080:CDS | 35.0% |
| GCCAAAAATGCATAAGCAAT+TGG | - | chr1_3:67861636-67861655 | Msa0136080:CDS | 35.0% | |
| ! | ATATTTACGGAGATTTTCGC+AGG | - | chr1_3:67861744-67861763 | Msa0136080:intron | 35.0% |
| GTGTCATGTGCTCATATAAT+AGG | - | chr1_3:67861839-67861858 | Msa0136080:intron | 35.0% | |
| TGCTCATATAATAGGGTGAA+TGG | - | chr1_3:67861847-67861866 | Msa0136080:intron | 35.0% | |
| TATGGTCTCATATATCATGC+AGG | - | chr1_3:67862562-67862581 | Msa0136080:CDS | 35.0% | |
| GACTATGTAGTTGTATACCA+GGG | + | chr1_3:67862677-67862696 | None:intergenic | 35.0% | |
| TACATAGTCCTAATGAGACT+TGG | - | chr1_3:67862688-67862707 | Msa0136080:CDS | 35.0% | |
| TTGCAAATGGAAGTGACTTT+GGG | + | chr1_3:67862726-67862745 | None:intergenic | 35.0% | |
| TTTGCAAATGGAAGTGACTT+TGG | + | chr1_3:67862727-67862746 | None:intergenic | 35.0% | |
| TCTTTAGTGCATACATCAGA+TGG | + | chr1_3:67862757-67862776 | None:intergenic | 35.0% | |
| GTTACTAATCATAACTGTGG+TGG | + | chr1_3:67862905-67862924 | None:intergenic | 35.0% | |
| CTTGTAAAGGGCTTGAATAT+CGG | + | chr1_3:67862945-67862964 | None:intergenic | 35.0% | |
| ACTTCTGTAGTCCTTGTAAA+GGG | + | chr1_3:67862957-67862976 | None:intergenic | 35.0% | |
| TACTTCTGTAGTCCTTGTAA+AGG | + | chr1_3:67862958-67862977 | None:intergenic | 35.0% | |
| ACCAATCTATAGAAGCAGAA+GGG | - | chr1_3:67863100-67863119 | Msa0136080:intron | 35.0% | |
| !! | ATTTTAGTCATAATGGCAGC+AGG | - | chr1_3:67863204-67863223 | Msa0136080:CDS | 35.0% |
| ! | AAAAGTGTAAGCAACATAGG+AGG | - | chr1_3:67863249-67863268 | Msa0136080:CDS | 35.0% |
| AAAGTGTAAGCAACATAGGA+GGG | - | chr1_3:67863250-67863269 | Msa0136080:CDS | 35.0% | |
| CAACATAGGAGGGATATTAT+GGG | - | chr1_3:67863260-67863279 | Msa0136080:intron | 35.0% | |
| ATATTATGGGTAGGTTATCC+TGG | - | chr1_3:67863273-67863292 | Msa0136080:intron | 35.0% | |
| GCCATAGCACAAGTAATATT+TGG | - | chr1_3:67863312-67863331 | Msa0136080:intron | 35.0% | |
| ATATTTGGAGACTATAACCC+AGG | - | chr1_3:67863327-67863346 | Msa0136080:intron | 35.0% | |
| CGAACTTAACTAAACCAATC+CGG | - | chr1_3:67863479-67863498 | Msa0136080:intron | 35.0% | |
| CAAATTGAACCAAAGCAAAC+CGG | + | chr1_3:67863501-67863520 | None:intergenic | 35.0% | |
| ! | ATTTGAGACCATAAGGTATG+TGG | + | chr1_3:67863761-67863780 | None:intergenic | 35.0% |
| TTGTGGATACCATGTAAATG+GGG | + | chr1_3:67863934-67863953 | None:intergenic | 35.0% | |
| GATTGTGGATACCATGTAAA+TGG | + | chr1_3:67863936-67863955 | None:intergenic | 35.0% | |
| ACTTGATCGACATATGATTG+TGG | + | chr1_3:67863951-67863970 | None:intergenic | 35.0% | |
| AAAACCTGTATGTTCTTCCA+GGG | + | chr1_3:67864019-67864038 | None:intergenic | 35.0% | |
| TAAAACCTGTATGTTCTTCC+AGG | + | chr1_3:67864020-67864039 | None:intergenic | 35.0% | |
| TCCATAGCCAAATTCATAGA+GGG | + | chr1_3:67864054-67864073 | None:intergenic | 35.0% | |
| ATCCATAGCCAAATTCATAG+AGG | + | chr1_3:67864055-67864074 | None:intergenic | 35.0% | |
| ! | TTGACATTTTCGCTTGTGAT+TGG | - | chr1_3:67864218-67864237 | Msa0136080:CDS | 35.0% |
| ! | AAGAACAATGGACCTTTTGA+TGG | - | chr1_3:67864245-67864264 | Msa0136080:CDS | 35.0% |
| !! | TCATGTGGTGTTAGTGTTTT+TGG | - | chr1_3:67864271-67864290 | Msa0136080:CDS | 35.0% |
| ! | AAAGAGCACAAGTTAAGGTT+GGG | - | chr1_3:67864351-67864370 | Msa0136080:CDS | 35.0% |
| TAGTGATGGTAAACGAAAGT+TGG | - | chr1_3:67864430-67864449 | Msa0136080:CDS | 35.0% | |
| TACATGATAACAGTAGCTAG+TGG | + | chr1_3:67864609-67864628 | None:intergenic | 35.0% | |
| ATGGTGGTAACATTACTATG+TGG | - | chr1_3:67864664-67864683 | Msa0136080:CDS | 35.0% | |
| ! | CATTACTATGTGGTAGTGTA+AGG | - | chr1_3:67864674-67864693 | Msa0136080:CDS | 35.0% |
| ATCAGTTACAGCCTTACATA+GGG | + | chr1_3:67864701-67864720 | None:intergenic | 35.0% | |
| AATCAGTTACAGCCTTACAT+AGG | + | chr1_3:67864702-67864721 | None:intergenic | 35.0% | |
| ATCTTATGAAACCAGAGCCA+AGG | - | chr1_3:67861038-67861057 | Msa0136080:three_prime_UTR | 40.0% | |
| CAACTAGTAAACCCTTCTAC+CGG | - | chr1_3:67861099-67861118 | Msa0136080:exon | 40.0% | |
| ! | TTGGTGTTCCTGCTTATGAA+TGG | - | chr1_3:67861133-67861152 | Msa0136080:CDS | 40.0% |
| CTTCATGGTGTCTCAAATGT+AGG | - | chr1_3:67861168-67861187 | Msa0136080:CDS | 40.0% | |
| AGCTAGAGCTATGTACAATG+TGG | - | chr1_3:67861311-67861330 | Msa0136080:CDS | 40.0% | |
| ATGTACAATGTGGATTTGGC+TGG | - | chr1_3:67861321-67861340 | Msa0136080:CDS | 40.0% | |
| ! | TGAATGTTTTTCGCGATCCA+AGG | - | chr1_3:67861367-67861386 | Msa0136080:CDS | 40.0% |
| !! | TCGGTTCCATTTTGATGCTA+AGG | - | chr1_3:67861572-67861591 | Msa0136080:CDS | 40.0% |
| AACACACAGCTCTTAAATGG+AGG | + | chr1_3:67861802-67861821 | None:intergenic | 40.0% | |
| TCCATTTAAGAGCTGTGTGT+TGG | - | chr1_3:67861801-67861820 | Msa0136080:intron | 40.0% | |
| TCCAACACACAGCTCTTAAA+TGG | + | chr1_3:67861805-67861824 | None:intergenic | 40.0% | |
| ATTTAAGAGCTGTGTGTTGG+AGG | - | chr1_3:67861804-67861823 | Msa0136080:intron | 40.0% | |
| TTTAAGAGCTGTGTGTTGGA+GGG | - | chr1_3:67861805-67861824 | Msa0136080:intron | 40.0% | |
| TGTTTCAGACTGTGATTCAG+TGG | - | chr1_3:67862382-67862401 | Msa0136080:CDS | 40.0% | |
| GCAGGTTTAAACATGAACTG+CGG | - | chr1_3:67862580-67862599 | Msa0136080:CDS | 40.0% | |
| GGACTATGTAGTTGTATACC+AGG | + | chr1_3:67862678-67862697 | None:intergenic | 40.0% | |
| CAAAGAAGCCAAGTCTCATT+AGG | + | chr1_3:67862699-67862718 | None:intergenic | 40.0% | |
| TCACTTCCATTTGCAAACCT+TGG | - | chr1_3:67862730-67862749 | Msa0136080:CDS | 40.0% | |
| CGATATTCAAGCCCTTTACA+AGG | - | chr1_3:67862943-67862962 | Msa0136080:CDS | 40.0% | |
| ! | TCTTTTTGCAGCAGCAGTTA+AGG | - | chr1_3:67863035-67863054 | Msa0136080:CDS | 40.0% |
| GACCAATCTATAGAAGCAGA+AGG | - | chr1_3:67863099-67863118 | Msa0136080:intron | 40.0% | |
| ! | AGAGTTAACTTGACATTGCC+TGG | - | chr1_3:67863129-67863148 | Msa0136080:intron | 40.0% |
| ACAAGCTTCTCTTGAAATCC+AGG | + | chr1_3:67863150-67863169 | None:intergenic | 40.0% | |
| AGAGAAGCTTGTGAAAGATG+TGG | - | chr1_3:67863158-67863177 | Msa0136080:intron | 40.0% | |
| GCAACATAGGAGGGATATTA+TGG | - | chr1_3:67863259-67863278 | Msa0136080:intron | 40.0% | |
| ATAGGAGGGATATTATGGGT+AGG | - | chr1_3:67863264-67863283 | Msa0136080:intron | 40.0% | |
| ! | TAAACCAATCCGGTTTGCTT+TGG | - | chr1_3:67863489-67863508 | Msa0136080:intron | 40.0% |
| TATGTTTGCACTGCATCCTT+TGG | - | chr1_3:67863873-67863892 | Msa0136080:intron | 40.0% | |
| CTCATGTTCATGTCTGTCAT+TGG | + | chr1_3:67863975-67863994 | None:intergenic | 40.0% | |
| ATTTCCCTGGAAGAACATAC+AGG | - | chr1_3:67864012-67864031 | Msa0136080:intron | 40.0% | |
| GGGAAATCCCTCTATGAATT+TGG | - | chr1_3:67864044-67864063 | Msa0136080:intron | 40.0% | |
| TCCCTCTATGAATTTGGCTA+TGG | - | chr1_3:67864050-67864069 | Msa0136080:intron | 40.0% | |
| GTGATTGGTGTGAAGAACAA+TGG | - | chr1_3:67864233-67864252 | Msa0136080:CDS | 40.0% | |
| !! | ACCTTTTGATGGATCTCATG+TGG | - | chr1_3:67864256-67864275 | Msa0136080:CDS | 40.0% |
| ACCACATGAGATCCATCAAA+AGG | + | chr1_3:67864260-67864279 | None:intergenic | 40.0% | |
| ! | GAAAGAGCACAAGTTAAGGT+TGG | - | chr1_3:67864350-67864369 | Msa0136080:CDS | 40.0% |
| !! | GGTAAACGAAAGTTGGTGAT+TGG | - | chr1_3:67864437-67864456 | Msa0136080:CDS | 40.0% |
| TAAGCGTGACACTAAGTCCT+TGG | + | chr1_3:67861058-67861077 | None:intergenic | 45.0% | |
| AACACCAAGCCTTGAAATGC+CGG | + | chr1_3:67861121-67861140 | None:intergenic | 45.0% | |
| GTGTTCCTGCTTATGAATGG+TGG | - | chr1_3:67861136-67861155 | Msa0136080:CDS | 45.0% | |
| TCTGACCACCATTCATAAGC+AGG | + | chr1_3:67861144-67861163 | None:intergenic | 45.0% | |
| TGCTTATGAATGGTGGTCAG+AGG | - | chr1_3:67861143-67861162 | Msa0136080:CDS | 45.0% | |
| GTGTCTCAAATGTAGGACCA+GGG | - | chr1_3:67861175-67861194 | Msa0136080:CDS | 45.0% | |
| ! | ATGTTTTTCGCGATCCAAGG+TGG | - | chr1_3:67861370-67861389 | Msa0136080:CDS | 45.0% |
| ! | TGTTTTTCGCGATCCAAGGT+GGG | - | chr1_3:67861371-67861390 | Msa0136080:CDS | 45.0% |
| ! | GTTCGTGGACTACAAGAAGT+TGG | - | chr1_3:67861456-67861475 | Msa0136080:CDS | 45.0% |
| ATTACACCTTGGAGAAGGTC+TGG | + | chr1_3:67861892-67861911 | None:intergenic | 45.0% | |
| CTCTGATTACACCTTGGAGA+AGG | + | chr1_3:67861897-67861916 | None:intergenic | 45.0% | |
| CTTCTCCAAGGTGTAATCAG+AGG | - | chr1_3:67861895-67861914 | Msa0136080:intron | 45.0% | |
| AAAGACTCCTGAAGATGCAG+TGG | - | chr1_3:67862433-67862452 | Msa0136080:CDS | 45.0% | |
| ATCTATTGTAGACCAAGCCC+TGG | - | chr1_3:67862657-67862676 | Msa0136080:CDS | 45.0% | |
| TGTAGTTGTATACCAGGGCT+TGG | + | chr1_3:67862672-67862691 | None:intergenic | 45.0% | |
| GATGGTCCAAGGTTTGCAAA+TGG | + | chr1_3:67862739-67862758 | None:intergenic | 45.0% | |
| TGCATACATCAGATGGTCCA+AGG | + | chr1_3:67862750-67862769 | None:intergenic | 45.0% | |
| ACTGTGGTGGCATTTGCATT+TGG | + | chr1_3:67862892-67862911 | None:intergenic | 45.0% | |
| AAAGGGCTTGAATATCGGCA+TGG | + | chr1_3:67862940-67862959 | None:intergenic | 45.0% | |
| TCTTCAGTAACTTACGCGCA+TGG | - | chr1_3:67862982-67863001 | Msa0136080:CDS | 45.0% | |
| ! | TTTTGCAGCAGCAGTTAAGG+CGG | - | chr1_3:67863038-67863057 | Msa0136080:CDS | 45.0% |
| !! | GATACAGTGGTGTTGGTTGT+TGG | - | chr1_3:67863072-67863091 | Msa0136080:intron | 45.0% |
| !! | AGTGGTGTTGGTTGTTGGAT+TGG | - | chr1_3:67863077-67863096 | Msa0136080:intron | 45.0% |
| GCCCTTCTGCTTCTATAGAT+TGG | + | chr1_3:67863104-67863123 | None:intergenic | 45.0% | |
| ATCTATAGAAGCAGAAGGGC+TGG | - | chr1_3:67863104-67863123 | Msa0136080:intron | 45.0% | |
| GTAGGTTATCCTGGTCAAGA+TGG | - | chr1_3:67863282-67863301 | Msa0136080:intron | 45.0% | |
| TGAACCAAAGCAAACCGGAT+TGG | + | chr1_3:67863496-67863515 | None:intergenic | 45.0% | |
| ! | AACGAACCTTCATACCGGTT+CGG | - | chr1_3:67863716-67863735 | Msa0136080:intron | 45.0% |
| ! | TATTTGAGACTTGAGACCGG+AGG | - | chr1_3:67863847-67863866 | Msa0136080:CDS | 45.0% |
| CAGTGCAAACATAACTCCTC+CGG | + | chr1_3:67863866-67863885 | None:intergenic | 45.0% | |
| TGCTATGTGGGTAGAGAATG+TGG | + | chr1_3:67864087-67864106 | None:intergenic | 45.0% | |
| AGAAGGAGCAGATGCTATGT+GGG | + | chr1_3:67864099-67864118 | None:intergenic | 45.0% | |
| TAGAAGGAGCAGATGCTATG+TGG | + | chr1_3:67864100-67864119 | None:intergenic | 45.0% | |
| GATTGGACAGCACACTATTC+TGG | - | chr1_3:67864454-67864473 | Msa0136080:CDS | 45.0% | |
| TAGTGTAAGGGCCCTATGTA+AGG | - | chr1_3:67864687-67864706 | Msa0136080:CDS | 45.0% | |
| TGACACTAAGTCCTTGGCTC+TGG | + | chr1_3:67861052-67861071 | None:intergenic | 50.0% | |
| ACCCTTCTACCGGCATTTCA+AGG | - | chr1_3:67861109-67861128 | Msa0136080:CDS | 50.0% | |
| GCCTTGAAATGCCGGTAGAA+GGG | + | chr1_3:67861113-67861132 | None:intergenic | 50.0% | |
| AGCCTTGAAATGCCGGTAGA+AGG | + | chr1_3:67861114-67861133 | None:intergenic | 50.0% | |
| TCTACCGGCATTTCAAGGCT+TGG | - | chr1_3:67861114-67861133 | Msa0136080:CDS | 50.0% | |
| GGTGTCTCAAATGTAGGACC+AGG | - | chr1_3:67861174-67861193 | Msa0136080:CDS | 50.0% | |
| GCAGCTGATAGTATCACTGC+TGG | + | chr1_3:67861240-67861259 | None:intergenic | 50.0% | |
| ! | GTTTTTCGCGATCCAAGGTG+GGG | - | chr1_3:67861372-67861391 | Msa0136080:CDS | 50.0% |
| ! | TTTTTCGCGATCCAAGGTGG+GGG | - | chr1_3:67861373-67861392 | Msa0136080:CDS | 50.0% |
| AACTCCAGGGGAAGATCCTT+TGG | - | chr1_3:67861407-67861426 | Msa0136080:CDS | 50.0% | |
| ACAACCAAAGGATCTTCCCC+TGG | + | chr1_3:67861414-67861433 | None:intergenic | 50.0% | |
| GCAGGTGACAAAGCAAGACT+TGG | - | chr1_3:67861762-67861781 | Msa0136080:intron | 50.0% | |
| GGTGACAAAGCAAGACTTGG+AGG | - | chr1_3:67861765-67861784 | Msa0136080:intron | 50.0% | |
| AGGTCTGGATCAGCACATGT+AGG | + | chr1_3:67861877-67861896 | None:intergenic | 50.0% | |
| ! | ACTGGCCTCTGATTACACCT+TGG | + | chr1_3:67861903-67861922 | None:intergenic | 50.0% |
| AAGGTGTAATCAGAGGCCAG+TGG | - | chr1_3:67861902-67861921 | Msa0136080:intron | 50.0% | |
| AGGTGTAATCAGAGGCCAGT+GGG | - | chr1_3:67861903-67861922 | Msa0136080:intron | 50.0% | |
| CAACACCACTGTATCAGCAG+AGG | + | chr1_3:67863067-67863086 | None:intergenic | 50.0% | |
| CTCTGCTGATACAGTGGTGT+TGG | - | chr1_3:67863065-67863084 | Msa0136080:intron | 50.0% | |
| GGTTATCCTGGTCAAGATGG+AGG | - | chr1_3:67863285-67863304 | Msa0136080:intron | 50.0% | |
| GCATTTCCTCCATCTTGACC+AGG | + | chr1_3:67863294-67863313 | None:intergenic | 50.0% | |
| GTAGTTCGGAACCACAGAAC+CGG | - | chr1_3:67863691-67863710 | Msa0136080:intron | 50.0% | |
| CGGTATGAAGGTTCGTTCAC+CGG | + | chr1_3:67863713-67863732 | None:intergenic | 50.0% | |
| CGGTGAACGAACCTTCATAC+CGG | - | chr1_3:67863711-67863730 | Msa0136080:intron | 50.0% | |
| !! | ACGAACCTTCATACCGGTTC+GGG | - | chr1_3:67863717-67863736 | Msa0136080:CDS | 50.0% |
| TTATTACCGTCGTCCCGAAC+CGG | + | chr1_3:67863733-67863752 | None:intergenic | 50.0% | |
| GTGGTAGGTCCCCATTTACA+TGG | - | chr1_3:67863922-67863941 | Msa0136080:intron | 50.0% | |
| CTCACCACTTCTGAACTTGG+TGG | + | chr1_3:67864299-67864318 | None:intergenic | 50.0% | |
| CCACTCACCACTTCTGAACT+TGG | + | chr1_3:67864302-67864321 | None:intergenic | 50.0% | |
| CCAAGTTCAGAAGTGGTGAG+TGG | - | chr1_3:67864299-67864318 | Msa0136080:CDS | 50.0% | |
| GGACAGCACACTATTCTGGT+TGG | - | chr1_3:67864458-67864477 | Msa0136080:CDS | 50.0% | |
| ! | GTTTCTGGAGGTGATGAGCA+TGG | - | chr1_3:67864645-67864664 | Msa0136080:CDS | 50.0% |
| !! | TGGTGGTCAGAGGCACTTCA+TGG | - | chr1_3:67861153-67861172 | Msa0136080:CDS | 55.0% |
| AGGGACGCGTTTCGATAGCA+GGG | - | chr1_3:67861194-67861213 | Msa0136080:CDS | 55.0% | |
| ! | CGTTTCGATAGCAGGGTACC+TGG | - | chr1_3:67861201-67861220 | Msa0136080:CDS | 55.0% |
| GCTGGAAAGCTAGTAGCACC+AGG | + | chr1_3:67861222-67861241 | None:intergenic | 55.0% | |
| GGCGTGGACAAGAAACTCCA+GGG | - | chr1_3:67861394-67861413 | Msa0136080:CDS | 55.0% | |
| GCGTGGACAAGAAACTCCAG+GGG | - | chr1_3:67861395-67861414 | Msa0136080:CDS | 55.0% | |
| GCTGATCCAGACCTTCTCCA+AGG | - | chr1_3:67861883-67861902 | Msa0136080:intron | 55.0% | |
| GGTGTAATCAGAGGCCAGTG+GGG | - | chr1_3:67861904-67861923 | Msa0136080:intron | 55.0% | |
| CAAACCCATCTAGACCCCAC+TGG | + | chr1_3:67861921-67861940 | None:intergenic | 55.0% | |
| GCAAGAGCCACTGCATCTTC+AGG | + | chr1_3:67862443-67862462 | None:intergenic | 55.0% | |
| GTGGCTCTTGCACTGAAAGC+AGG | - | chr1_3:67862452-67862471 | Msa0136080:CDS | 55.0% | |
| !! | GCTCTAGAAGCTGCGAAGCA+AGG | - | chr1_3:67862790-67862809 | Msa0136080:CDS | 55.0% |
| GATGTGGCTGCTGCTACCAA+AGG | - | chr1_3:67863174-67863193 | Msa0136080:intron | 55.0% | |
| !! | AGGTTCGTTCACCGGTTCTG+TGG | + | chr1_3:67863705-67863724 | None:intergenic | 55.0% |
| !! | TTCATACCGGTTCGGGACGA+CGG | - | chr1_3:67863724-67863743 | Msa0136080:CDS | 55.0% |
| GGAGCCACCAAGTTCAGAAG+TGG | - | chr1_3:67864292-67864311 | Msa0136080:CDS | 55.0% | |
| TCTGGAGGTGATGAGCATGG+TGG | - | chr1_3:67864648-67864667 | Msa0136080:CDS | 55.0% | |
| CTGCTATCGAAACGCGTCCC+TGG | + | chr1_3:67861195-67861214 | None:intergenic | 60.0% | |
| CAGGGACGCGTTTCGATAGC+AGG | - | chr1_3:67861193-67861212 | Msa0136080:CDS | 60.0% | |
| GGGCGTGGACAAGAAACTCC+AGG | - | chr1_3:67861393-67861412 | Msa0136080:CDS | 60.0% | |
| AGAGGCCAGTGGGGTCTAGA+TGG | - | chr1_3:67861913-67861932 | Msa0136080:intron | 60.0% | |
| GAGGCCAGTGGGGTCTAGAT+GGG | - | chr1_3:67861914-67861933 | Msa0136080:intron | 60.0% | |
| GGCAGCCTCTGCTGATACAG+TGG | - | chr1_3:67863059-67863078 | Msa0136080:intron | 60.0% | |
| GTCGTCCCGAACCGGTATGA+AGG | + | chr1_3:67863725-67863744 | None:intergenic | 60.0% | |
| TCTTGTCCACGCCCCCACCT+TGG | + | chr1_3:67861387-67861406 | None:intergenic | 65.0% | |
| CGCGATCCAAGGTGGGGGCG+TGG | - | chr1_3:67861378-67861397 | Msa0136080:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 67860874 | 67864778 | 67860874 | ID=Msa0136080;Name=Msa0136080 |
| chr1_3 | mRNA | 67860874 | 67864778 | 67860874 | ID=Msa0136080-mRNA-1;Parent=Msa0136080;Name=Msa0136080-mRNA-1;_AED=0.01;_eAED=0.01;_QI=36|1|1|1|1|1|5|228|781 |
| chr1_3 | exon | 67860874 | 67861730 | 67860874 | ID=Msa0136080-mRNA-1:exon:23348;Parent=Msa0136080-mRNA-1 |
| chr1_3 | exon | 67862304 | 67863068 | 67862304 | ID=Msa0136080-mRNA-1:exon:23347;Parent=Msa0136080-mRNA-1 |
| chr1_3 | exon | 67863179 | 67863276 | 67863179 | ID=Msa0136080-mRNA-1:exon:23346;Parent=Msa0136080-mRNA-1 |
| chr1_3 | exon | 67863717 | 67863886 | 67863717 | ID=Msa0136080-mRNA-1:exon:23345;Parent=Msa0136080-mRNA-1 |
| chr1_3 | exon | 67864059 | 67864778 | 67864059 | ID=Msa0136080-mRNA-1:exon:23344;Parent=Msa0136080-mRNA-1 |
| chr1_3 | five_prime_UTR | 67864743 | 67864778 | 67864743 | ID=Msa0136080-mRNA-1:five_prime_utr;Parent=Msa0136080-mRNA-1 |
| chr1_3 | CDS | 67864059 | 67864742 | 67864059 | ID=Msa0136080-mRNA-1:cds;Parent=Msa0136080-mRNA-1 |
| chr1_3 | CDS | 67863717 | 67863886 | 67863717 | ID=Msa0136080-mRNA-1:cds;Parent=Msa0136080-mRNA-1 |
| chr1_3 | CDS | 67863179 | 67863276 | 67863179 | ID=Msa0136080-mRNA-1:cds;Parent=Msa0136080-mRNA-1 |
| chr1_3 | CDS | 67862304 | 67863068 | 67862304 | ID=Msa0136080-mRNA-1:cds;Parent=Msa0136080-mRNA-1 |
| chr1_3 | CDS | 67861102 | 67861730 | 67861102 | ID=Msa0136080-mRNA-1:cds;Parent=Msa0136080-mRNA-1 |
| chr1_3 | three_prime_UTR | 67860874 | 67861101 | 67860874 | ID=Msa0136080-mRNA-1:three_prime_utr;Parent=Msa0136080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
