Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314480 | XP_003593786.1 | 97.802 | 273 | 6 | 0 | 1 | 273 | 1 | 273 | 0.0 | 547 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314480 | sp|Q8LFP7|NIP12_ARATH | 70.980 | 255 | 67 | 1 | 26 | 273 | 40 | 294 | 3.69e-130 | 373 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032840 | Msa0314480 | -0.830592 | 2.692290e-55 | -8.615850e-47 |
| Msa0073670 | Msa0314480 | 0.819037 | 1.433467e-52 | -8.615850e-47 |
| Msa0096670 | Msa0314480 | 0.804765 | 1.845961e-49 | -8.615850e-47 |
| Msa0114540 | Msa0314480 | -0.833113 | 6.426688e-56 | -8.615850e-47 |
| Msa0120330 | Msa0314480 | 0.802486 | 5.484577e-49 | -8.615850e-47 |
| Msa0136080 | Msa0314480 | 0.809146 | 2.185451e-50 | -8.615850e-47 |
| Msa0136110 | Msa0314480 | 0.808976 | 2.376577e-50 | -8.615850e-47 |
| Msa0137150 | Msa0314480 | 0.810839 | 9.442372e-51 | -8.615850e-47 |
| Msa0138820 | Msa0314480 | -0.805191 | 1.503700e-49 | -8.615850e-47 |
| Msa0143080 | Msa0314480 | 0.831268 | 1.837475e-55 | -8.615850e-47 |
| Msa0172350 | Msa0314480 | 0.820667 | 6.078013e-53 | -8.615850e-47 |
| Msa0194280 | Msa0314480 | 0.961825 | 3.742233e-120 | -8.615850e-47 |
| Msa0230550 | Msa0314480 | -0.825236 | 5.233388e-54 | -8.615850e-47 |
| Msa0235980 | Msa0314480 | 0.980402 | 3.900126e-150 | -8.615850e-47 |
| Msa0236980 | Msa0314480 | 0.828295 | 9.733670e-55 | -8.615850e-47 |
| Msa0238890 | Msa0314480 | 0.804914 | 1.718840e-49 | -8.615850e-47 |
| Msa0259560 | Msa0314480 | 0.834033 | 3.787352e-56 | -8.615850e-47 |
| Msa0267760 | Msa0314480 | 0.816784 | 4.625894e-52 | -8.615850e-47 |
| Msa0274290 | Msa0314480 | 0.940094 | 4.192372e-100 | -8.615850e-47 |
| Msa0314480 | Msa0328210 | 0.818364 | 2.037659e-52 | -8.615850e-47 |
| Msa0314480 | Msa0378340 | 0.803540 | 3.319756e-49 | -8.615850e-47 |
| Msa0314480 | Msa0402820 | 0.817878 | 2.623987e-52 | -8.615850e-47 |
| Msa0314480 | Msa0418220 | 0.810330 | 1.216228e-50 | -8.615850e-47 |
| Msa0314480 | Msa0427690 | 0.804713 | 1.892493e-49 | -8.615850e-47 |
| Msa0314480 | Msa0430820 | 0.806578 | 7.685075e-50 | -8.615850e-47 |
| Msa0314480 | Msa0436280 | -0.809981 | 1.446177e-50 | -8.615850e-47 |
| Msa0314480 | Msa0449830 | 0.801955 | 7.052097e-49 | -8.615850e-47 |
| Msa0314480 | Msa0464630 | 0.804688 | 1.915576e-49 | -8.615850e-47 |
| Msa0314480 | Msa0469910 | -0.803018 | 4.258082e-49 | -8.615850e-47 |
| Msa0314480 | Msa0497420 | 0.815405 | 9.400966e-52 | -8.615850e-47 |
| Msa0314480 | Msa0518520 | 0.803382 | 3.580800e-49 | -8.615850e-47 |
| Msa0314480 | Msa0526710 | 0.809893 | 1.510315e-50 | -8.615850e-47 |
| Msa0314480 | Msa0537920 | 0.813423 | 2.579162e-51 | -8.615850e-47 |
| Msa0314480 | Msa0560470 | 0.800578 | 1.349427e-48 | -8.615850e-47 |
| Msa0314480 | Msa0574890 | 0.816379 | 5.699292e-52 | -8.615850e-47 |
| Msa0314480 | Msa0590680 | 0.812287 | 4.572912e-51 | -8.615850e-47 |
| Msa0314480 | Msa0669850 | 0.805356 | 1.388739e-49 | -8.615850e-47 |
| Msa0314480 | Msa0687000 | 0.814680 | 1.361979e-51 | -8.615850e-47 |
| Msa0314480 | Msa0712310 | 0.800070 | 1.712062e-48 | -8.615850e-47 |
| Msa0314480 | Msa0713820 | 0.804936 | 1.700256e-49 | -8.615850e-47 |
| Msa0314480 | Msa0761580 | 0.807711 | 4.422740e-50 | -8.615850e-47 |
| Msa0314480 | Msa0787750 | 0.825858 | 3.726213e-54 | -8.615850e-47 |
| Msa0314480 | Msa0797120 | 0.802193 | 6.301652e-49 | -8.615850e-47 |
| Msa0314480 | Msa0830990 | 0.808405 | 3.147458e-50 | -8.615850e-47 |
| Msa0314480 | Msa0840850 | -0.805835 | 1.101790e-49 | -8.615850e-47 |
| Msa0314480 | Msa0872310 | 0.823352 | 1.450930e-53 | -8.615850e-47 |
| Msa0314480 | Msa0877420 | 0.812916 | 3.331341e-51 | -8.615850e-47 |
| Msa0314480 | Msa0896220 | 0.810331 | 1.215684e-50 | -8.615850e-47 |
| Msa0314480 | Msa0922540 | 0.816847 | 4.478206e-52 | -8.615850e-47 |
| Msa0314480 | Msa0930780 | 0.828452 | 8.918696e-55 | -8.615850e-47 |
| Msa0314480 | Msa0936340 | 0.818130 | 2.301678e-52 | -8.615850e-47 |
| Msa0314480 | Msa0937550 | 0.811827 | 5.762743e-51 | -8.615850e-47 |
| Msa0314480 | Msa0955300 | 0.812434 | 4.248624e-51 | -8.615850e-47 |
| Msa0314480 | Msa0979550 | 0.822818 | 1.932805e-53 | -8.615850e-47 |
| Msa0314480 | Msa0996080 | 0.822781 | 1.971774e-53 | -8.615850e-47 |
| Msa0314480 | Msa1008060 | -0.807094 | 5.977144e-50 | -8.615850e-47 |
| Msa0314480 | Msa1013770 | 0.806287 | 8.852514e-50 | -8.615850e-47 |
| Msa0314480 | Msa1014270 | 0.824908 | 6.254681e-54 | -8.615850e-47 |
| Msa0314480 | Msa1041530 | 0.802536 | 5.354038e-49 | -8.615850e-47 |
| Msa0314480 | Msa1049510 | -0.800900 | 1.160145e-48 | -8.615850e-47 |
| Msa0314480 | Msa1078710 | 0.804592 | 2.005966e-49 | -8.615850e-47 |
| Msa0314480 | Msa1123880 | 0.830397 | 3.005991e-55 | -8.615850e-47 |
| Msa0314480 | Msa1130210 | -0.800528 | 1.381548e-48 | -8.615850e-47 |
| Msa0314480 | Msa1133710 | 0.810343 | 1.208198e-50 | -8.615850e-47 |
| Msa0314480 | Msa1134110 | 0.802077 | 6.657814e-49 | -8.615850e-47 |
| Msa0314480 | Msa1165870 | 0.802605 | 5.183627e-49 | -8.615850e-47 |
| Msa0314480 | Msa1183660 | 0.812617 | 3.874067e-51 | -8.615850e-47 |
| Msa0314480 | Msa1211090 | 0.811173 | 7.990293e-51 | -8.615850e-47 |
| Msa0314480 | Msa1218280 | -0.818093 | 2.345755e-52 | -8.615850e-47 |
| Msa0314480 | Msa1228890 | 0.810702 | 1.010904e-50 | -8.615850e-47 |
| Msa0314480 | Msa1237030 | 0.813660 | 2.287724e-51 | -8.615850e-47 |
| Msa0314480 | Msa1269580 | -0.803165 | 3.971029e-49 | -8.615850e-47 |
| Msa0314480 | Msa1305740 | 0.814430 | 1.546680e-51 | -8.615850e-47 |
| Msa0314480 | Msa1315870 | 0.801932 | 7.128712e-49 | -8.615850e-47 |
| Msa0314480 | Msa1362510 | 0.807424 | 5.089457e-50 | -8.615850e-47 |
| Msa0314480 | Msa1367880 | 0.804681 | 1.921924e-49 | -8.615850e-47 |
| Msa0314480 | Msa1373510 | 0.820190 | 7.818863e-53 | -8.615850e-47 |
| Msa0314480 | Msa1374550 | 0.803502 | 3.380755e-49 | -8.615850e-47 |
| Msa0314480 | Msa1382410 | 0.806966 | 6.362248e-50 | -8.615850e-47 |
| Msa0314480 | Msa1382720 | 0.817328 | 3.490507e-52 | -8.615850e-47 |
| Msa0314480 | Msa1390310 | 0.824299 | 8.700663e-54 | -8.615850e-47 |
| Msa0314480 | Msa1398860 | 0.810268 | 1.253973e-50 | -8.615850e-47 |
| Msa0314480 | Msa1414930 | 0.809211 | 2.117056e-50 | -8.615850e-47 |
| Msa0314480 | Msa1429360 | -0.810086 | 1.372582e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314480 | MtrunA17_Chr2g0284581 | 97.802 | 273 | 6 | 0 | 1 | 273 | 1 | 273 | 0.0 | 547 |
| Msa0314480 | MtrunA17_Chr2g0284591 | 81.061 | 264 | 50 | 0 | 7 | 270 | 5 | 268 | 4.14e-163 | 453 |
| Msa0314480 | MtrunA17_Chr2g0284601 | 97.727 | 220 | 5 | 0 | 54 | 273 | 6 | 225 | 4.90e-157 | 436 |
| Msa0314480 | MtrunA17_Chr2g0284611 | 78.195 | 266 | 58 | 0 | 1 | 266 | 1 | 266 | 2.59e-154 | 431 |
| Msa0314480 | MtrunA17_Chr8g0379911 | 76.493 | 268 | 63 | 0 | 1 | 268 | 1 | 268 | 8.06e-153 | 427 |
| Msa0314480 | MtrunA17_Chr8g0379901 | 70.480 | 271 | 80 | 0 | 3 | 273 | 4 | 274 | 2.13e-142 | 401 |
| Msa0314480 | MtrunA17_Chr2g0284631 | 69.853 | 272 | 75 | 2 | 1 | 265 | 53 | 324 | 7.24e-141 | 399 |
| Msa0314480 | MtrunA17_Chr4g0044201 | 55.967 | 243 | 92 | 2 | 32 | 272 | 29 | 258 | 1.62e-94 | 279 |
| Msa0314480 | MtrunA17_Chr5g0435051 | 49.612 | 258 | 121 | 3 | 1 | 253 | 1 | 254 | 7.93e-85 | 254 |
| Msa0314480 | MtrunA17_Chr3g0079421 | 53.556 | 239 | 108 | 2 | 18 | 256 | 8 | 243 | 5.06e-84 | 252 |
| Msa0314480 | MtrunA17_Chr4g0001221 | 50.840 | 238 | 108 | 3 | 34 | 265 | 71 | 305 | 1.96e-70 | 219 |
| Msa0314480 | MtrunA17_Chr7g0217331 | 47.085 | 223 | 115 | 2 | 31 | 251 | 28 | 249 | 6.68e-69 | 214 |
| Msa0314480 | MtrunA17_Chr2g0333771 | 51.163 | 215 | 100 | 2 | 36 | 248 | 78 | 289 | 1.28e-67 | 212 |
| Msa0314480 | MtrunA17_Chr5g0426131 | 45.522 | 268 | 129 | 7 | 1 | 260 | 1 | 259 | 4.75e-67 | 209 |
| Msa0314480 | MtrunA17_Chr1g0201331 | 46.800 | 250 | 114 | 4 | 26 | 259 | 54 | 300 | 2.56e-66 | 208 |
| Msa0314480 | MtrunA17_Chr1g0184541 | 39.535 | 215 | 129 | 1 | 38 | 252 | 62 | 275 | 1.37e-47 | 160 |
| Msa0314480 | MtrunA17_Chr4g0001111 | 50.667 | 150 | 69 | 2 | 34 | 181 | 71 | 217 | 9.46e-37 | 130 |
| Msa0314480 | MtrunA17_Chr4g0001161 | 47.518 | 141 | 69 | 2 | 51 | 189 | 1 | 138 | 1.27e-29 | 109 |
| Msa0314480 | MtrunA17_Chr8g0340161 | 32.850 | 207 | 132 | 3 | 37 | 236 | 18 | 224 | 1.18e-25 | 101 |
| Msa0314480 | MtrunA17_Chr4g0001121 | 49.462 | 93 | 43 | 1 | 177 | 265 | 6 | 98 | 2.42e-25 | 96.7 |
| Msa0314480 | MtrunA17_Chr1g0188771 | 32.218 | 239 | 144 | 6 | 26 | 253 | 12 | 243 | 4.29e-24 | 97.8 |
| Msa0314480 | MtrunA17_Chr2g0331261 | 30.568 | 229 | 150 | 5 | 37 | 256 | 19 | 247 | 7.35e-23 | 94.4 |
| Msa0314480 | MtrunA17_Chr5g0399341 | 33.913 | 230 | 141 | 7 | 37 | 256 | 18 | 246 | 1.21e-22 | 93.6 |
| Msa0314480 | MtrunA17_Chr1g0146161 | 32.143 | 224 | 136 | 7 | 19 | 236 | 7 | 220 | 4.20e-22 | 92.0 |
| Msa0314480 | MtrunA17_Chr6g0478191 | 29.583 | 240 | 153 | 6 | 24 | 253 | 10 | 243 | 6.17e-22 | 92.0 |
| Msa0314480 | MtrunA17_Chr1g0146171 | 32.000 | 250 | 150 | 9 | 19 | 258 | 7 | 246 | 2.87e-21 | 90.1 |
| Msa0314480 | MtrunA17_Chr4g0001151 | 42.857 | 133 | 56 | 3 | 51 | 181 | 1 | 115 | 9.73e-20 | 87.0 |
| Msa0314480 | MtrunA17_Chr4g0030861 | 32.159 | 227 | 140 | 7 | 43 | 256 | 26 | 251 | 2.08e-17 | 79.3 |
| Msa0314480 | MtrunA17_Chr7g0264961 | 30.667 | 225 | 146 | 6 | 37 | 252 | 20 | 243 | 2.96e-17 | 79.0 |
| Msa0314480 | MtrunA17_Chr3g0145671 | 28.384 | 229 | 141 | 5 | 38 | 247 | 37 | 261 | 1.33e-16 | 77.8 |
| Msa0314480 | MtrunA17_Chr2g0326621 | 30.899 | 178 | 111 | 3 | 72 | 237 | 84 | 261 | 1.61e-16 | 77.8 |
| Msa0314480 | MtrunA17_Chr5g0436701 | 31.019 | 216 | 127 | 7 | 41 | 237 | 58 | 270 | 2.92e-16 | 77.0 |
| Msa0314480 | MtrunA17_Chr7g0264111 | 29.412 | 221 | 135 | 6 | 38 | 237 | 39 | 259 | 9.89e-16 | 75.5 |
| Msa0314480 | MtrunA17_Chr5g0397391 | 30.047 | 213 | 133 | 5 | 41 | 237 | 55 | 267 | 1.05e-15 | 75.5 |
| Msa0314480 | MtrunA17_Chr1g0212671 | 32.227 | 211 | 130 | 5 | 37 | 237 | 20 | 227 | 1.24e-15 | 74.7 |
| Msa0314480 | MtrunA17_Chr8g0386961 | 30.516 | 213 | 132 | 6 | 41 | 237 | 55 | 267 | 1.34e-15 | 75.1 |
| Msa0314480 | MtrunA17_Chr3g0113211 | 28.638 | 213 | 136 | 5 | 41 | 237 | 58 | 270 | 8.80e-15 | 72.8 |
| Msa0314480 | MtrunA17_Chr4g0006001 | 29.245 | 212 | 135 | 5 | 41 | 237 | 59 | 270 | 1.72e-14 | 72.0 |
| Msa0314480 | MtrunA17_Chr1g0199731 | 28.796 | 191 | 118 | 4 | 72 | 247 | 82 | 269 | 2.14e-14 | 71.6 |
| Msa0314480 | MtrunA17_Chr4g0020781 | 28.125 | 192 | 128 | 3 | 84 | 273 | 30 | 213 | 6.92e-13 | 66.2 |
| Msa0314480 | MtrunA17_Chr7g0222791 | 30.263 | 228 | 135 | 8 | 37 | 251 | 20 | 236 | 7.25e-13 | 66.6 |
| Msa0314480 | MtrunA17_Chr4g0029071 | 29.282 | 181 | 110 | 5 | 72 | 237 | 82 | 259 | 5.94e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314480 | AT4G18910.1 | 70.980 | 255 | 67 | 1 | 26 | 273 | 40 | 294 | 3.75e-131 | 373 |
| Msa0314480 | AT4G19030.1 | 68.651 | 252 | 72 | 1 | 26 | 270 | 43 | 294 | 4.49e-125 | 358 |
| Msa0314480 | AT5G37820.1 | 58.431 | 255 | 103 | 1 | 18 | 269 | 20 | 274 | 7.86e-100 | 293 |
| Msa0314480 | AT5G37820.2 | 58.431 | 255 | 103 | 1 | 18 | 269 | 56 | 310 | 2.99e-99 | 293 |
| Msa0314480 | AT5G37810.1 | 54.015 | 274 | 119 | 3 | 1 | 268 | 1 | 273 | 1.42e-98 | 290 |
| Msa0314480 | AT4G18910.2 | 75.410 | 183 | 38 | 1 | 26 | 201 | 40 | 222 | 6.01e-92 | 271 |
| Msa0314480 | AT1G31885.1 | 53.036 | 247 | 109 | 1 | 20 | 259 | 25 | 271 | 3.07e-90 | 270 |
| Msa0314480 | AT2G34390.1 | 51.748 | 286 | 120 | 3 | 1 | 269 | 1 | 285 | 3.24e-90 | 269 |
| Msa0314480 | AT4G19030.3 | 70.330 | 182 | 47 | 1 | 26 | 200 | 43 | 224 | 1.80e-87 | 260 |
| Msa0314480 | AT2G34390.2 | 55.462 | 238 | 98 | 2 | 39 | 269 | 7 | 243 | 4.96e-86 | 257 |
| Msa0314480 | AT1G31885.2 | 54.839 | 217 | 91 | 1 | 50 | 259 | 1 | 217 | 1.63e-83 | 251 |
| Msa0314480 | AT4G19030.2 | 68.519 | 162 | 44 | 1 | 27 | 181 | 44 | 205 | 2.44e-75 | 229 |
| Msa0314480 | AT2G34390.3 | 54.128 | 218 | 82 | 3 | 1 | 201 | 1 | 217 | 1.36e-68 | 212 |
| Msa0314480 | AT4G10380.1 | 47.755 | 245 | 113 | 4 | 27 | 259 | 63 | 304 | 1.51e-67 | 212 |
| Msa0314480 | AT1G80760.1 | 52.036 | 221 | 101 | 2 | 34 | 252 | 76 | 293 | 1.79e-67 | 212 |
| Msa0314480 | AT2G34390.4 | 52.500 | 200 | 77 | 3 | 1 | 183 | 1 | 199 | 1.64e-59 | 189 |
| Msa0314480 | AT3G06100.1 | 40.367 | 218 | 128 | 2 | 37 | 253 | 45 | 261 | 2.16e-44 | 151 |
| Msa0314480 | AT3G06100.2 | 40.654 | 214 | 125 | 2 | 41 | 253 | 1 | 213 | 5.17e-44 | 149 |
| Msa0314480 | AT1G31885.3 | 56.842 | 95 | 41 | 0 | 20 | 114 | 25 | 119 | 2.33e-31 | 114 |
| Msa0314480 | AT2G29870.1 | 48.718 | 117 | 60 | 0 | 153 | 269 | 20 | 136 | 1.51e-30 | 111 |
| Msa0314480 | AT3G16240.1 | 34.783 | 207 | 128 | 3 | 37 | 236 | 18 | 224 | 3.41e-28 | 108 |
| Msa0314480 | AT5G47450.1 | 34.199 | 231 | 142 | 6 | 37 | 257 | 18 | 248 | 9.28e-27 | 105 |
| Msa0314480 | AT4G17340.1 | 33.478 | 230 | 143 | 6 | 37 | 256 | 18 | 247 | 8.50e-25 | 99.8 |
| Msa0314480 | AT3G06100.3 | 39.716 | 141 | 83 | 2 | 114 | 253 | 41 | 180 | 9.04e-25 | 98.2 |
| Msa0314480 | AT1G17810.1 | 32.794 | 247 | 143 | 7 | 24 | 253 | 13 | 253 | 2.34e-23 | 96.3 |
| Msa0314480 | AT1G73190.1 | 30.556 | 252 | 140 | 7 | 24 | 253 | 13 | 251 | 7.97e-22 | 92.4 |
| Msa0314480 | AT2G25810.1 | 30.837 | 227 | 137 | 7 | 19 | 237 | 7 | 221 | 5.89e-19 | 84.0 |
| Msa0314480 | AT3G26520.1 | 32.381 | 210 | 129 | 5 | 37 | 236 | 21 | 227 | 3.02e-18 | 82.0 |
| Msa0314480 | AT4G35100.1 | 30.131 | 229 | 137 | 6 | 38 | 247 | 38 | 262 | 1.38e-17 | 80.9 |
| Msa0314480 | AT4G35100.2 | 30.131 | 229 | 137 | 6 | 38 | 247 | 38 | 262 | 1.38e-17 | 80.9 |
| Msa0314480 | AT5G60660.1 | 28.270 | 237 | 143 | 6 | 35 | 247 | 36 | 269 | 2.14e-17 | 80.5 |
| Msa0314480 | AT2G36830.1 | 32.301 | 226 | 136 | 7 | 26 | 240 | 12 | 231 | 2.24e-17 | 79.7 |
| Msa0314480 | AT2G16850.1 | 28.017 | 232 | 138 | 6 | 38 | 247 | 36 | 260 | 3.65e-16 | 77.0 |
| Msa0314480 | AT2G39010.1 | 31.217 | 189 | 116 | 5 | 72 | 247 | 81 | 268 | 9.23e-16 | 75.9 |
| Msa0314480 | AT4G01470.1 | 30.288 | 208 | 138 | 3 | 37 | 237 | 20 | 227 | 1.10e-15 | 75.1 |
| Msa0314480 | AT3G53420.1 | 29.319 | 191 | 117 | 4 | 72 | 247 | 82 | 269 | 1.58e-15 | 75.1 |
| Msa0314480 | AT3G53420.2 | 29.319 | 191 | 117 | 4 | 72 | 247 | 82 | 269 | 1.58e-15 | 75.1 |
| Msa0314480 | AT1G01620.2 | 31.492 | 181 | 106 | 4 | 72 | 237 | 17 | 194 | 1.14e-14 | 71.6 |
| Msa0314480 | AT3G54820.1 | 26.923 | 234 | 144 | 5 | 38 | 247 | 38 | 268 | 1.17e-14 | 72.8 |
| Msa0314480 | AT1G01620.1 | 31.492 | 181 | 106 | 4 | 72 | 237 | 89 | 266 | 2.00e-14 | 72.0 |
| Msa0314480 | AT2G37170.1 | 28.272 | 191 | 119 | 4 | 72 | 247 | 80 | 267 | 3.41e-14 | 71.2 |
| Msa0314480 | AT3G61430.2 | 27.830 | 212 | 138 | 5 | 41 | 237 | 55 | 266 | 4.15e-14 | 71.2 |
| Msa0314480 | AT3G61430.1 | 27.830 | 212 | 138 | 5 | 41 | 237 | 55 | 266 | 4.15e-14 | 71.2 |
| Msa0314480 | AT4G00430.1 | 31.492 | 181 | 106 | 4 | 72 | 237 | 90 | 267 | 6.06e-14 | 70.9 |
| Msa0314480 | AT2G37170.2 | 28.272 | 191 | 119 | 4 | 72 | 247 | 123 | 310 | 6.32e-14 | 71.2 |
| Msa0314480 | AT2G37180.1 | 28.272 | 191 | 119 | 4 | 72 | 247 | 80 | 267 | 7.15e-14 | 70.5 |
| Msa0314480 | AT3G47440.1 | 29.630 | 216 | 142 | 5 | 37 | 244 | 22 | 235 | 9.66e-14 | 69.7 |
| Msa0314480 | AT2G45960.1 | 27.830 | 212 | 138 | 5 | 41 | 237 | 55 | 266 | 1.22e-13 | 69.7 |
| Msa0314480 | AT4G23400.1 | 30.939 | 181 | 107 | 4 | 72 | 237 | 90 | 267 | 1.83e-13 | 69.3 |
| Msa0314480 | AT2G45960.3 | 28.351 | 194 | 127 | 4 | 41 | 222 | 55 | 248 | 7.55e-13 | 67.8 |
| Msa0314480 | AT2G45960.2 | 28.351 | 194 | 127 | 4 | 41 | 222 | 55 | 248 | 7.99e-13 | 67.4 |
Find 94 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTCTGTTGGTCACATTTC+TGG | 0.071303 | 2_4:-10230771 | Msa0314480:CDS |
| TATCTTATGTTCGTCATTTC+TGG | 0.082482 | 2_4:-10229936 | Msa0314480:CDS |
| AAGAGACCTGCCCCAATTTA+TGG | 0.163408 | 2_4:+10231490 | None:intergenic |
| AAGAGTGCCTCTTTCCTTAA+AGG | 0.183929 | 2_4:-10228849 | Msa0314480:CDS |
| TCCTGGGATTTCAATTGTTT+GGG | 0.185357 | 2_4:-10230817 | Msa0314480:CDS |
| TTCGCATATGGAAAATAAAT+TGG | 0.195186 | 2_4:+10231591 | None:intergenic |
| TTCATTGATGCTCCAGTAAT+TGG | 0.244218 | 2_4:+10229020 | None:intergenic |
| TAGAGGAATATGGATATATT+TGG | 0.245829 | 2_4:-10228955 | Msa0314480:CDS |
| ATCCTGGGATTTCAATTGTT+TGG | 0.255375 | 2_4:-10230818 | Msa0314480:CDS |
| CTTATTCTTTGTCGGTGATA+TGG | 0.259310 | 2_4:-10231402 | Msa0314480:exon |
| GGGTCTCACTGTTATGGTTT+TGG | 0.266153 | 2_4:-10230796 | Msa0314480:CDS |
| TGCATGACTCATCACAGTTT+TGG | 0.271846 | 2_4:+10231318 | None:intergenic |
| TGCATCCACCAAAAGGTTTC+CGG | 0.271933 | 2_4:-10230715 | Msa0314480:CDS |
| TTCCTTAAAGGAGTAGAAAA+TGG | 0.281136 | 2_4:-10228837 | Msa0314480:CDS |
| ACGTACTTCTTGATATTTGC+AGG | 0.286199 | 2_4:-10230888 | Msa0314480:CDS |
| TTTGTTAACAGGCCAATTAC+TGG | 0.289918 | 2_4:-10229032 | Msa0314480:intron |
| CTGCTTAACCGGAAACCTTT+TGG | 0.301395 | 2_4:+10230707 | None:intergenic |
| TGTTTGGGGTCTCACTGTTA+TGG | 0.308145 | 2_4:-10230802 | Msa0314480:CDS |
| TATATAATATCTCAAGTTCT+TGG | 0.312865 | 2_4:-10230080 | Msa0314480:CDS |
| CATATCACCGACAAAGAATA+AGG | 0.326631 | 2_4:+10231403 | None:intergenic |
| CTTCTAAATGTTATGTTTGC+CGG | 0.328211 | 2_4:-10229403 | Msa0314480:CDS |
| GCAGGTCCTAAGCTCCTTGC+AGG | 0.331255 | 2_4:+10228996 | None:intergenic |
| ATAAAGAGTTTAGAGGAATA+TGG | 0.344662 | 2_4:-10228965 | Msa0314480:CDS |
| AGAGACCTGCCCCAATTTAT+GGG | 0.348925 | 2_4:+10231491 | None:intergenic |
| TTACATTCAAAACCATTTCA+TGG | 0.353026 | 2_4:+10231354 | None:intergenic |
| GCATCATCCTTATTCTTTGT+CGG | 0.365447 | 2_4:-10231410 | Msa0314480:five_prime_UTR |
| TATCTCTAGTTAATTTAGAT+TGG | 0.367884 | 2_4:-10228709 | Msa0314480:three_prime_UTR |
| ACTCGGATCACCTGCTTAAC+CGG | 0.396444 | 2_4:+10230696 | None:intergenic |
| TCCTGCTGGTTCTGATCTCC+AGG | 0.406259 | 2_4:-10229988 | Msa0314480:CDS |
| ATTGTTCATAAAGAGTTTAG+AGG | 0.413252 | 2_4:-10228972 | Msa0314480:CDS |
| TTCTGATCTCCAGGCATTTG+TGG | 0.415818 | 2_4:-10229979 | Msa0314480:CDS |
| ATGTAATTTACTTTATGTTA+CGG | 0.424850 | 2_4:-10228624 | Msa0314480:three_prime_UTR |
| TTCTACTCCTTTAAGGAAAG+AGG | 0.436744 | 2_4:+10228842 | None:intergenic |
| ATGAACCCTGCAAGGAGCTT+AGG | 0.445185 | 2_4:-10229002 | Msa0314480:CDS |
| AGTAGATCCAACTGCAAGTC+CGG | 0.451623 | 2_4:+10229429 | None:intergenic |
| ACACTTAGGCTTATATTCAA+TGG | 0.454254 | 2_4:-10230038 | Msa0314480:CDS |
| GACAAAGTGGTAACACATCC+TGG | 0.456746 | 2_4:-10230834 | Msa0314480:CDS |
| CAAAAGGTTTCCGGTTAAGC+AGG | 0.462415 | 2_4:-10230706 | Msa0314480:intron |
| TAAGTGAGTTAGATTTATCA+AGG | 0.466276 | 2_4:-10228808 | Msa0314480:exon |
| CTCTTACTAATTTCACGCAC+TGG | 0.467398 | 2_4:+10228867 | None:intergenic |
| AAGCAATGGAAACCATGAAA+TGG | 0.472703 | 2_4:-10231366 | Msa0314480:CDS |
| GCAAAAGAGGCACATAGTCT+TGG | 0.488743 | 2_4:+10231294 | None:intergenic |
| AGTCTTATAAAGAGGAAGGA+TGG | 0.488962 | 2_4:+10231522 | None:intergenic |
| ACAACTCTTGGTGCCATAGC+TGG | 0.490463 | 2_4:-10228927 | Msa0314480:CDS |
| TTGGTGCCATAGCTGGTACA+TGG | 0.491349 | 2_4:-10228920 | Msa0314480:CDS |
| ATACACACCTTCTGCAAAAG+AGG | 0.497346 | 2_4:+10231281 | None:intergenic |
| TTCTAAATGTTATGTTTGCC+GGG | 0.499731 | 2_4:-10229402 | Msa0314480:intron |
| TATTTGGTATCAACAACTCT+TGG | 0.500417 | 2_4:-10228939 | Msa0314480:CDS |
| AACTCTTTATGAACAATAGC+AGG | 0.503476 | 2_4:+10228978 | None:intergenic |
| TGCAGGGTGTGCTGCTGTTG+TGG | 0.511373 | 2_4:-10230871 | Msa0314480:CDS |
| TTGCTCATGCATCCACCAAA+AGG | 0.514247 | 2_4:-10230722 | Msa0314480:CDS |
| TATAAAGAGGAAGGATGGGA+TGG | 0.516676 | 2_4:+10231527 | None:intergenic |
| CCTGGGATTTCAATTGTTTG+GGG | 0.520676 | 2_4:-10230816 | Msa0314480:CDS |
| TGAATTCAACCACAAATGCC+TGG | 0.521494 | 2_4:+10229970 | None:intergenic |
| GTCTTATAAAGAGGAAGGAT+GGG | 0.525684 | 2_4:+10231523 | None:intergenic |
| GAGTGCCCATAAATTGGGGC+AGG | 0.526299 | 2_4:-10231496 | Msa0314480:five_prime_UTR |
| TTACCACTTTGTCATTGTCA+AGG | 0.527510 | 2_4:+10230844 | None:intergenic |
| GGAGATTACCGCTCTATTGT+CGG | 0.528942 | 2_4:+10229905 | None:intergenic |
| GTAGTTGGTAGCAGAGGTTG+TGG | 0.535028 | 2_4:-10230913 | Msa0314480:intron |
| CACTCAAAAGTCTTATAAAG+AGG | 0.535047 | 2_4:+10231514 | None:intergenic |
| TGGTGCCATAGCTGGTACAT+GGG | 0.538881 | 2_4:-10228919 | Msa0314480:CDS |
| TCGCAGATTGGTGAGTTGGC+CGG | 0.540241 | 2_4:-10229448 | Msa0314480:intron |
| ATAAAGAGGAAGGATGGGAT+GGG | 0.542417 | 2_4:+10231528 | None:intergenic |
| CAAAAGTCTTATAAAGAGGA+AGG | 0.550367 | 2_4:+10231518 | None:intergenic |
| CCCCAAACAATTGAAATCCC+AGG | 0.550515 | 2_4:+10230816 | None:intergenic |
| TATGTTCGTCATTTCTGGAG+TGG | 0.553193 | 2_4:-10229931 | Msa0314480:CDS |
| GCATGAGCAATGGTGACAGC+AGG | 0.555499 | 2_4:+10230735 | None:intergenic |
| TAGTTGGTAGCAGAGGTTGT+GGG | 0.558311 | 2_4:-10230912 | Msa0314480:CDS |
| AATATCGCAGATTGGTGAGT+TGG | 0.558536 | 2_4:-10229452 | Msa0314480:intron |
| GCACTGGCTTGTTTGTGTAC+CGG | 0.558893 | 2_4:+10228883 | None:intergenic |
| TAGGCTTATATTCAATGGCA+AGG | 0.559061 | 2_4:-10230033 | Msa0314480:CDS |
| ATATACATAACTAGAGGAAA+CGG | 0.565529 | 2_4:-10228672 | Msa0314480:three_prime_UTR |
| CATGGGCATATACTTTCATC+CGG | 0.565944 | 2_4:-10228902 | Msa0314480:CDS |
| CTTGGATCAACTCTTGCAAG+TGG | 0.567738 | 2_4:-10230062 | Msa0314480:CDS |
| CTTAAAGGAGTAGAAAATGG+TGG | 0.573302 | 2_4:-10228834 | Msa0314480:CDS |
| CGTACTTCTTGATATTTGCA+GGG | 0.575700 | 2_4:-10230887 | Msa0314480:CDS |
| GCCTGGAGATCAGAACCAGC+AGG | 0.579301 | 2_4:+10229987 | None:intergenic |
| ATATGCCCATGTACCAGCTA+TGG | 0.580208 | 2_4:+10228914 | None:intergenic |
| ACTTGAGATATTATATAAGC+CGG | 0.584944 | 2_4:+10230086 | None:intergenic |
| GAGTTGGCCGGACTTGCAGT+TGG | 0.596194 | 2_4:-10229436 | Msa0314480:CDS |
| GCTGATCATTCATCAAGCAA+TGG | 0.606516 | 2_4:-10231380 | Msa0314480:CDS |
| ACAAAGTGGTAACACATCCT+GGG | 0.613941 | 2_4:-10230833 | Msa0314480:CDS |
| GAGCATCAATGAACCCTGCA+AGG | 0.617643 | 2_4:-10229010 | Msa0314480:CDS |
| CAGGTCCTAAGCTCCTTGCA+GGG | 0.629880 | 2_4:+10228997 | None:intergenic |
| GTAACATAAAGTAAATTACA+TGG | 0.638499 | 2_4:+10228626 | None:intergenic |
| CTCTTGCAAGTGGAACACTT+AGG | 0.640873 | 2_4:-10230052 | Msa0314480:CDS |
| TATGTAATATACATAACTAG+AGG | 0.643201 | 2_4:-10228678 | Msa0314480:three_prime_UTR |
| TTGAATGTAGTTGGTAGCAG+AGG | 0.649135 | 2_4:-10230919 | Msa0314480:intron |
| AGTTGGTAGCAGAGGTTGTG+GGG | 0.653045 | 2_4:-10230911 | Msa0314480:CDS |
| TTTGGTGGATGCATGAGCAA+TGG | 0.663155 | 2_4:+10230725 | None:intergenic |
| GATTACCGCTCTATTGTCGG+TGG | 0.674328 | 2_4:+10229908 | None:intergenic |
| GATTTATCAAGGATTGCACG+AGG | 0.684895 | 2_4:-10228797 | Msa0314480:three_prime_UTR |
| GAACCTTGACAATGACAAAG+TGG | 0.704582 | 2_4:-10230847 | Msa0314480:CDS |
| AGTGGCCACCGACAATAGAG+CGG | 0.719424 | 2_4:-10229913 | Msa0314480:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTCAATAATTTTTTAGA+TGG | - | chr2_4:10229654-10229673 | Msa0314480:intron | 10.0% |
| !!! | AACAAATTTTTTATTTTCAA+CGG | + | chr2_4:10230334-10230353 | None:intergenic | 10.0% |
| !!! | TTTATTTTTCTTTTGAAAAT+TGG | - | chr2_4:10230577-10230596 | Msa0314480:intron | 10.0% |
| !!! | TTATTTTTCTTTTGAAAATT+GGG | - | chr2_4:10230578-10230597 | Msa0314480:intron | 10.0% |
| !! | ATATTGACAAAAAAAATAAA+AGG | + | chr2_4:10230684-10230703 | None:intergenic | 10.0% |
| !!! | GAATTTAATCTCTAAAATAT+CGG | - | chr2_4:10228944-10228963 | Msa0314480:CDS | 15.0% |
| !!! | ATCTTTGTTATTAAAGTATT+AGG | + | chr2_4:10229046-10229065 | None:intergenic | 15.0% |
| !! | TAAAGAGTAAAATACTTTAA+AGG | - | chr2_4:10229130-10229149 | Msa0314480:intron | 15.0% |
| !!! | TACTTTAAAGGTTAAATTAA+CGG | - | chr2_4:10229142-10229161 | Msa0314480:intron | 15.0% |
| !! | GAGTATTTGTTTATATATAA+GGG | + | chr2_4:10230276-10230295 | None:intergenic | 15.0% |
| !!! | AGAGTATTTGTTTATATATA+AGG | + | chr2_4:10230277-10230296 | None:intergenic | 15.0% |
| !! | ATGTAATTTACTTTATGTTA+CGG | - | chr2_4:10231527-10231546 | Msa0314480:five_prime_UTR | 15.0% |
| !!! | TTGAAAATAATTTTCGCATA+TGG | + | chr2_4:10228575-10228594 | None:intergenic | 20.0% |
| !!! | CTGATATGTGATTTTAAATA+TGG | - | chr2_4:10229171-10229190 | Msa0314480:intron | 20.0% |
| !! | GAATCAATGTTGAAATAAAA+TGG | - | chr2_4:10229193-10229212 | Msa0314480:intron | 20.0% |
| !!! | GAATATAGTTTTAAAGAACT+CGG | + | chr2_4:10229475-10229494 | None:intergenic | 20.0% |
| !! | AATGTATCTGATTCAAAATT+TGG | - | chr2_4:10229538-10229557 | Msa0314480:intron | 20.0% |
| !! | AAGAAAATATGATTGCTTTA+AGG | + | chr2_4:10229741-10229760 | None:intergenic | 20.0% |
| !! | CCATATTATGAATTCAAAAA+CGG | + | chr2_4:10229908-10229927 | None:intergenic | 20.0% |
| !! | TTTGGATAATATGCAAAAAA+TGG | + | chr2_4:10229973-10229992 | None:intergenic | 20.0% |
| !! | GTACAATTAAGTATACTATT+TGG | + | chr2_4:10229991-10230010 | None:intergenic | 20.0% |
| !! | TATATAATATCTCAAGTTCT+TGG | - | chr2_4:10230071-10230090 | Msa0314480:CDS | 20.0% |
| !! | ATAAACAAATACTCTTGTAT+TGG | - | chr2_4:10230282-10230301 | Msa0314480:intron | 20.0% |
| !! | ACATGTTAATGAATATAATG+TGG | - | chr2_4:10230548-10230567 | Msa0314480:intron | 20.0% |
| !! | TATCTCTAGTTAATTTAGAT+TGG | - | chr2_4:10231442-10231461 | Msa0314480:five_prime_UTR | 20.0% |
| !! | TATGTAATATACATAACTAG+AGG | - | chr2_4:10231473-10231492 | Msa0314480:five_prime_UTR | 20.0% |
| !! | GTAACATAAAGTAAATTACA+TGG | + | chr2_4:10231528-10231547 | None:intergenic | 20.0% |
| ! | TTCGCATATGGAAAATAAAT+TGG | + | chr2_4:10228563-10228582 | None:intergenic | 25.0% |
| ! | TTACATTCAAAACCATTTCA+TGG | + | chr2_4:10228800-10228819 | None:intergenic | 25.0% |
| !!! | GAAATGGTTTTGAATGTAAA+TGG | - | chr2_4:10228801-10228820 | Msa0314480:three_prime_UTR | 25.0% |
| ! | TGTATTATGTTGAATGTAGT+TGG | - | chr2_4:10229223-10229242 | Msa0314480:intron | 25.0% |
| !!! | CAATAATTTTTTAGATGGTG+TGG | - | chr2_4:10229659-10229678 | Msa0314480:intron | 25.0% |
| ! | AAATGACATAATATAGAGCA+TGG | + | chr2_4:10229868-10229887 | None:intergenic | 25.0% |
| !!! | CCGTTTTTGAATTCATAATA+TGG | - | chr2_4:10229905-10229924 | Msa0314480:intron | 25.0% |
| ! | GCAAAAAATGGAAAAAGTTT+AGG | + | chr2_4:10229961-10229980 | None:intergenic | 25.0% |
| ! | ACTTGAGATATTATATAAGC+CGG | + | chr2_4:10230068-10230087 | None:intergenic | 25.0% |
| ! | TTGTTTATATATAAGGGCAA+AGG | + | chr2_4:10230270-10230289 | None:intergenic | 25.0% |
| !! | TTCATTAACATGTGTTTCTA+AGG | + | chr2_4:10230541-10230560 | None:intergenic | 25.0% |
| !! | TTGAGGTTTGATTTATAGTT+AGG | + | chr2_4:10230781-10230800 | None:intergenic | 25.0% |
| !!! | TTCTCAATATGTTTAGTTTG+AGG | + | chr2_4:10230798-10230817 | None:intergenic | 25.0% |
| ! | TCTAACATTTACTCTCTTAT+TGG | + | chr2_4:10230946-10230965 | None:intergenic | 25.0% |
| ! | TAATCTTATTGAAGAACTCT+CGG | + | chr2_4:10231031-10231050 | None:intergenic | 25.0% |
| !! | AATCCTATATGTTTGTTAAC+AGG | - | chr2_4:10231108-10231127 | Msa0314480:intron | 25.0% |
| ! | ATTGTTCATAAAGAGTTTAG+AGG | - | chr2_4:10231179-10231198 | Msa0314480:intron | 25.0% |
| ! | ATAAAGAGTTTAGAGGAATA+TGG | - | chr2_4:10231186-10231205 | Msa0314480:intron | 25.0% |
| ! | TAGAGGAATATGGATATATT+TGG | - | chr2_4:10231196-10231215 | Msa0314480:intron | 25.0% |
| ! | TAAGTGAGTTAGATTTATCA+AGG | - | chr2_4:10231343-10231362 | Msa0314480:CDS | 25.0% |
| ! | ATATACATAACTAGAGGAAA+CGG | - | chr2_4:10231479-10231498 | Msa0314480:five_prime_UTR | 25.0% |
| !!! | TCGATTTTTTCATCGAATTA+TGG | - | chr2_4:10231568-10231587 | Msa0314480:five_prime_UTR | 25.0% |
| !!! | CGATTTTTTCATCGAATTAT+GGG | - | chr2_4:10231569-10231588 | Msa0314480:five_prime_UTR | 25.0% |
| ! | CAAAAGTCTTATAAAGAGGA+AGG | + | chr2_4:10228636-10228655 | None:intergenic | 30.0% |
| ! | CACTCAAAAGTCTTATAAAG+AGG | + | chr2_4:10228640-10228659 | None:intergenic | 30.0% |
| CAAAAAAGTTCTATGTAGAG+TGG | + | chr2_4:10228904-10228923 | None:intergenic | 30.0% | |
| TGCTTTATATGCGAAAAAGT+TGG | - | chr2_4:10229502-10229521 | Msa0314480:intron | 30.0% | |
| GCTTTATATGCGAAAAAGTT+GGG | - | chr2_4:10229503-10229522 | Msa0314480:intron | 30.0% | |
| AATCCATATGCTTCAAAGTT+GGG | + | chr2_4:10229588-10229607 | None:intergenic | 30.0% | |
| TAATCCATATGCTTCAAAGT+TGG | + | chr2_4:10229589-10229608 | None:intergenic | 30.0% | |
| AAAACGGTTGCATACATATA+CGG | + | chr2_4:10229892-10229911 | None:intergenic | 30.0% | |
| GGAAGAGAAATTTCAATTGA+AGG | + | chr2_4:10229940-10229959 | None:intergenic | 30.0% | |
| TCTTCAATCTATAATCTTGC+AGG | - | chr2_4:10230040-10230059 | Msa0314480:CDS | 30.0% | |
| ACACTTAGGCTTATATTCAA+TGG | - | chr2_4:10230113-10230132 | Msa0314480:intron | 30.0% | |
| TATCTTATGTTCGTCATTTC+TGG | - | chr2_4:10230215-10230234 | Msa0314480:intron | 30.0% | |
| AATTGCAAATATGTCACAAG+TGG | - | chr2_4:10230423-10230442 | Msa0314480:intron | 30.0% | |
| ! | ACAATAGTGTTGAAGATTGA+TGG | + | chr2_4:10230479-10230498 | None:intergenic | 30.0% |
| ! | TTTTTGTCAATATCGCAGAT+TGG | - | chr2_4:10230691-10230710 | Msa0314480:intron | 30.0% |
| CTTCTAAATGTTATGTTTGC+CGG | - | chr2_4:10230748-10230767 | Msa0314480:CDS | 30.0% | |
| TTCTAAATGTTATGTTTGCC+GGG | - | chr2_4:10230749-10230768 | Msa0314480:CDS | 30.0% | |
| TTTATAGTTAGGTTCATACC+CGG | + | chr2_4:10230770-10230789 | None:intergenic | 30.0% | |
| TAACAATCACTCTCTTATTG+AGG | - | chr2_4:10230851-10230870 | Msa0314480:CDS | 30.0% | |
| AACAATCACTCTCTTATTGA+GGG | - | chr2_4:10230852-10230871 | Msa0314480:CDS | 30.0% | |
| TTATTGGATCAAACTCACAT+GGG | + | chr2_4:10230930-10230949 | None:intergenic | 30.0% | |
| TAAGAGAGTAAATGTTAGAG+AGG | - | chr2_4:10230947-10230966 | Msa0314480:intron | 30.0% | |
| TAGAGAGGACATTAGAAAAA+AGG | - | chr2_4:10230962-10230981 | Msa0314480:intron | 30.0% | |
| CATTCCTCAAATATAGTTAG+TGG | - | chr2_4:10230994-10231013 | Msa0314480:intron | 30.0% | |
| AACTCTTTATGAACAATAGC+AGG | + | chr2_4:10231176-10231195 | None:intergenic | 30.0% | |
| TATTTGGTATCAACAACTCT+TGG | - | chr2_4:10231212-10231231 | Msa0314480:intron | 30.0% | |
| TTCCTTAAAGGAGTAGAAAA+TGG | - | chr2_4:10231314-10231333 | Msa0314480:CDS | 30.0% | |
| GTCTTATAAAGAGGAAGGAT+GGG | + | chr2_4:10228631-10228650 | None:intergenic | 35.0% | |
| ! | AGTCTTATAAAGAGGAAGGA+TGG | + | chr2_4:10228632-10228651 | None:intergenic | 35.0% |
| !! | ACTTTTGAGTGCCCATAAAT+TGG | - | chr2_4:10228649-10228668 | Msa0314480:three_prime_UTR | 35.0% |
| !! | CTTTTGAGTGCCCATAAATT+GGG | - | chr2_4:10228650-10228669 | Msa0314480:three_prime_UTR | 35.0% |
| !! | TTTTGAGTGCCCATAAATTG+GGG | - | chr2_4:10228651-10228670 | Msa0314480:three_prime_UTR | 35.0% |
| GCATCATCCTTATTCTTTGT+CGG | - | chr2_4:10228741-10228760 | Msa0314480:three_prime_UTR | 35.0% | |
| CATATCACCGACAAAGAATA+AGG | + | chr2_4:10228751-10228770 | None:intergenic | 35.0% | |
| CTTATTCTTTGTCGGTGATA+TGG | - | chr2_4:10228749-10228768 | Msa0314480:three_prime_UTR | 35.0% | |
| AAGCAATGGAAACCATGAAA+TGG | - | chr2_4:10228785-10228804 | Msa0314480:three_prime_UTR | 35.0% | |
| AGTTCTATGTAGAGTGGTTT+AGG | + | chr2_4:10228898-10228917 | None:intergenic | 35.0% | |
| ACGTACTTCTTGATATTTGC+AGG | - | chr2_4:10229263-10229282 | Msa0314480:intron | 35.0% | |
| CGTACTTCTTGATATTTGCA+GGG | - | chr2_4:10229264-10229283 | Msa0314480:intron | 35.0% | |
| TTACCACTTTGTCATTGTCA+AGG | + | chr2_4:10229310-10229329 | None:intergenic | 35.0% | |
| ATCCTGGGATTTCAATTGTT+TGG | - | chr2_4:10229333-10229352 | Msa0314480:intron | 35.0% | |
| TCCTGGGATTTCAATTGTTT+GGG | - | chr2_4:10229334-10229353 | Msa0314480:intron | 35.0% | |
| !!! | ATGGTTTTGGTTTACTCTGT+TGG | - | chr2_4:10229368-10229387 | Msa0314480:intron | 35.0% |
| ATCTATAATCTTGCAGGTAC+CGG | - | chr2_4:10230046-10230065 | Msa0314480:CDS | 35.0% | |
| TAGGCTTATATTCAATGGCA+AGG | - | chr2_4:10230118-10230137 | Msa0314480:intron | 35.0% | |
| AAATATGTCACAAGTGGACA+TGG | - | chr2_4:10230429-10230448 | Msa0314480:intron | 35.0% | |
| AATATGTCACAAGTGGACAT+GGG | - | chr2_4:10230430-10230449 | Msa0314480:intron | 35.0% | |
| ! | CATATTAACACGTGTCGTTA+AGG | + | chr2_4:10230660-10230679 | None:intergenic | 35.0% |
| CTTATTGGATCAAACTCACA+TGG | + | chr2_4:10230931-10230950 | None:intergenic | 35.0% | |
| GTGTCCACTAACTATATTTG+AGG | + | chr2_4:10231001-10231020 | None:intergenic | 35.0% | |
| TGGCCTGTTAACAAACATAT+AGG | + | chr2_4:10231114-10231133 | None:intergenic | 35.0% | |
| TTTGTTAACAGGCCAATTAC+TGG | - | chr2_4:10231119-10231138 | Msa0314480:intron | 35.0% | |
| TTCATTGATGCTCCAGTAAT+TGG | + | chr2_4:10231134-10231153 | None:intergenic | 35.0% | |
| ! | TTCTACTCCTTTAAGGAAAG+AGG | + | chr2_4:10231312-10231331 | None:intergenic | 35.0% |
| ! | CACCATTTTCTACTCCTTTA+AGG | + | chr2_4:10231319-10231338 | None:intergenic | 35.0% |
| CTTAAAGGAGTAGAAAATGG+TGG | - | chr2_4:10231317-10231336 | Msa0314480:CDS | 35.0% | |
| ATAAAGAGGAAGGATGGGAT+GGG | + | chr2_4:10228626-10228645 | None:intergenic | 40.0% | |
| TATAAAGAGGAAGGATGGGA+TGG | + | chr2_4:10228627-10228646 | None:intergenic | 40.0% | |
| GCTGATCATTCATCAAGCAA+TGG | - | chr2_4:10228771-10228790 | Msa0314480:three_prime_UTR | 40.0% | |
| ! | GCATGACTCATCACAGTTTT+GGG | + | chr2_4:10228835-10228854 | None:intergenic | 40.0% |
| ! | TGCATGACTCATCACAGTTT+TGG | + | chr2_4:10228836-10228855 | None:intergenic | 40.0% |
| ATACACACCTTCTGCAAAAG+AGG | + | chr2_4:10228873-10228892 | None:intergenic | 40.0% | |
| !! | TTGAATGTAGTTGGTAGCAG+AGG | - | chr2_4:10229232-10229251 | Msa0314480:intron | 40.0% |
| GAACCTTGACAATGACAAAG+TGG | - | chr2_4:10229304-10229323 | Msa0314480:intron | 40.0% | |
| ACAAAGTGGTAACACATCCT+GGG | - | chr2_4:10229318-10229337 | Msa0314480:intron | 40.0% | |
| CCTGGGATTTCAATTGTTTG+GGG | - | chr2_4:10229335-10229354 | Msa0314480:intron | 40.0% | |
| TACTCTGTTGGTCACATTTC+TGG | - | chr2_4:10229380-10229399 | Msa0314480:intron | 40.0% | |
| TTCGCATATAAAGCACACGA+CGG | + | chr2_4:10229497-10229516 | None:intergenic | 40.0% | |
| !! | TGACCCAACTTTGAAGCATA+TGG | - | chr2_4:10229582-10229601 | Msa0314480:intron | 40.0% |
| GATGTTATGCGTGACTATGA+TGG | - | chr2_4:10229624-10229643 | Msa0314480:intron | 40.0% | |
| !! | GGCAAGGAAAACCATTTTTC+AGG | - | chr2_4:10230134-10230153 | Msa0314480:intron | 40.0% |
| !! | CAGGAAGTGTTCCTGAAAAA+TGG | + | chr2_4:10230148-10230167 | None:intergenic | 40.0% |
| TGAATTCAACCACAAATGCC+TGG | + | chr2_4:10230184-10230203 | None:intergenic | 40.0% | |
| ! | TATGTTCGTCATTTCTGGAG+TGG | - | chr2_4:10230220-10230239 | Msa0314480:intron | 40.0% |
| AATATCGCAGATTGGTGAGT+TGG | - | chr2_4:10230699-10230718 | Msa0314480:intron | 40.0% | |
| TCTTATTGAGGGAACTCATG+TGG | - | chr2_4:10230863-10230882 | Msa0314480:CDS | 40.0% | |
| GAATTGGGTATCACCTAAAG+TGG | + | chr2_4:10230895-10230914 | None:intergenic | 40.0% | |
| CATGTCGTCACAATTCAGTT+TGG | - | chr2_4:10231055-10231074 | Msa0314480:intron | 40.0% | |
| CATGGGCATATACTTTCATC+CGG | - | chr2_4:10231249-10231268 | Msa0314480:intron | 40.0% | |
| CTCTTACTAATTTCACGCAC+TGG | + | chr2_4:10231287-10231306 | None:intergenic | 40.0% | |
| !! | AAGAGTGCCTCTTTCCTTAA+AGG | - | chr2_4:10231302-10231321 | Msa0314480:CDS | 40.0% |
| GATTTATCAAGGATTGCACG+AGG | - | chr2_4:10231354-10231373 | Msa0314480:CDS | 40.0% | |
| AGAGACCTGCCCCAATTTAT+GGG | + | chr2_4:10228663-10228682 | None:intergenic | 45.0% | |
| AAGAGACCTGCCCCAATTTA+TGG | + | chr2_4:10228664-10228683 | None:intergenic | 45.0% | |
| ! | GCAAAAGAGGCACATAGTCT+TGG | + | chr2_4:10228860-10228879 | None:intergenic | 45.0% |
| ! | CTATGTGCCTCTTTTGCAGA+AGG | - | chr2_4:10228863-10228882 | Msa0314480:CDS | 45.0% |
| !! | TAGTTGGTAGCAGAGGTTGT+GGG | - | chr2_4:10229239-10229258 | Msa0314480:intron | 45.0% |
| GACAAAGTGGTAACACATCC+TGG | - | chr2_4:10229317-10229336 | Msa0314480:intron | 45.0% | |
| CCCCAAACAATTGAAATCCC+AGG | + | chr2_4:10229338-10229357 | None:intergenic | 45.0% | |
| ! | TGTTTGGGGTCTCACTGTTA+TGG | - | chr2_4:10229349-10229368 | Msa0314480:intron | 45.0% |
| ! | GGGTCTCACTGTTATGGTTT+TGG | - | chr2_4:10229355-10229374 | Msa0314480:intron | 45.0% |
| ! | TTTGGTGGATGCATGAGCAA+TGG | + | chr2_4:10229429-10229448 | None:intergenic | 45.0% |
| TTGCTCATGCATCCACCAAA+AGG | - | chr2_4:10229429-10229448 | Msa0314480:CDS | 45.0% | |
| TGCATCCACCAAAAGGTTTC+CGG | - | chr2_4:10229436-10229455 | Msa0314480:CDS | 45.0% | |
| ! | CTTAACCGGAAACCTTTTGG+TGG | + | chr2_4:10229444-10229463 | None:intergenic | 45.0% |
| ! | CTGCTTAACCGGAAACCTTT+TGG | + | chr2_4:10229447-10229466 | None:intergenic | 45.0% |
| CAAAAGGTTTCCGGTTAAGC+AGG | - | chr2_4:10229445-10229464 | Msa0314480:CDS | 45.0% | |
| CTTGGATCAACTCTTGCAAG+TGG | - | chr2_4:10230089-10230108 | Msa0314480:CDS | 45.0% | |
| CTCTTGCAAGTGGAACACTT+AGG | - | chr2_4:10230099-10230118 | Msa0314480:intron | 45.0% | |
| !! | TTTTCAGGAACACTTCCTGC+TGG | - | chr2_4:10230149-10230168 | Msa0314480:intron | 45.0% |
| TTCTGATCTCCAGGCATTTG+TGG | - | chr2_4:10230172-10230191 | Msa0314480:intron | 45.0% | |
| GGAGATTACCGCTCTATTGT+CGG | + | chr2_4:10230249-10230268 | None:intergenic | 45.0% | |
| AGTAGATCCAACTGCAAGTC+CGG | + | chr2_4:10230725-10230744 | None:intergenic | 45.0% | |
| CATGTGGATCACACCACTTT+AGG | - | chr2_4:10230879-10230898 | Msa0314480:CDS | 45.0% | |
| !! | GGGTCTCACACTTTGGAATT+GGG | + | chr2_4:10230910-10230929 | None:intergenic | 45.0% |
| !! | TGGGTCTCACACTTTGGAAT+TGG | + | chr2_4:10230911-10230930 | None:intergenic | 45.0% |
| ATATGCCCATGTACCAGCTA+TGG | + | chr2_4:10231240-10231259 | None:intergenic | 45.0% | |
| !! | GTAGTTGGTAGCAGAGGTTG+TGG | - | chr2_4:10229238-10229257 | Msa0314480:intron | 50.0% |
| !! | AGTTGGTAGCAGAGGTTGTG+GGG | - | chr2_4:10229240-10229259 | Msa0314480:intron | 50.0% |
| ACTCGGATCACCTGCTTAAC+CGG | + | chr2_4:10229458-10229477 | None:intergenic | 50.0% | |
| GATTACCGCTCTATTGTCGG+TGG | + | chr2_4:10230246-10230265 | None:intergenic | 50.0% | |
| CTCACATGGGTCTCACACTT+TGG | + | chr2_4:10230917-10230936 | None:intergenic | 50.0% | |
| GAGCATCAATGAACCCTGCA+AGG | - | chr2_4:10231141-10231160 | Msa0314480:intron | 50.0% | |
| ATGAACCCTGCAAGGAGCTT+AGG | - | chr2_4:10231149-10231168 | Msa0314480:intron | 50.0% | |
| !! | ACAACTCTTGGTGCCATAGC+TGG | - | chr2_4:10231224-10231243 | Msa0314480:intron | 50.0% |
| !! | TTGGTGCCATAGCTGGTACA+TGG | - | chr2_4:10231231-10231250 | Msa0314480:intron | 50.0% |
| !! | TGGTGCCATAGCTGGTACAT+GGG | - | chr2_4:10231232-10231251 | Msa0314480:intron | 50.0% |
| !! | GCACTGGCTTGTTTGTGTAC+CGG | + | chr2_4:10231271-10231290 | None:intergenic | 50.0% |
| GAGTGCCCATAAATTGGGGC+AGG | - | chr2_4:10228655-10228674 | Msa0314480:three_prime_UTR | 55.0% | |
| GCATGAGCAATGGTGACAGC+AGG | + | chr2_4:10229419-10229438 | None:intergenic | 55.0% | |
| !! | TCCTGCTGGTTCTGATCTCC+AGG | - | chr2_4:10230163-10230182 | Msa0314480:intron | 55.0% |
| AGTGGCCACCGACAATAGAG+CGG | - | chr2_4:10230238-10230257 | Msa0314480:intron | 55.0% | |
| ! | TCGCAGATTGGTGAGTTGGC+CGG | - | chr2_4:10230703-10230722 | Msa0314480:intron | 55.0% |
| CAGGTCCTAAGCTCCTTGCA+GGG | + | chr2_4:10231157-10231176 | None:intergenic | 55.0% | |
| ! | TGCAGGGTGTGCTGCTGTTG+TGG | - | chr2_4:10229280-10229299 | Msa0314480:intron | 60.0% |
| GCCTGGAGATCAGAACCAGC+AGG | + | chr2_4:10230167-10230186 | None:intergenic | 60.0% | |
| GAGTTGGCCGGACTTGCAGT+TGG | - | chr2_4:10230715-10230734 | Msa0314480:CDS | 60.0% | |
| GCAGGTCCTAAGCTCCTTGC+AGG | + | chr2_4:10231158-10231177 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 10228551 | 10231622 | 10228551 | ID=Msa0314480;Name=Msa0314480 |
| chr2_4 | mRNA | 10228551 | 10231622 | 10228551 | ID=Msa0314480-mRNA-1;Parent=Msa0314480;Name=Msa0314480-mRNA-1;_AED=0.12;_eAED=0.12;_QI=217|1|1|1|1|1|5|273|273 |
| chr2_4 | exon | 10228551 | 10229043 | 10228551 | ID=Msa0314480-mRNA-1:exon:3948;Parent=Msa0314480-mRNA-1 |
| chr2_4 | exon | 10229403 | 10229464 | 10229403 | ID=Msa0314480-mRNA-1:exon:3947;Parent=Msa0314480-mRNA-1 |
| chr2_4 | exon | 10229914 | 10230111 | 10229914 | ID=Msa0314480-mRNA-1:exon:3946;Parent=Msa0314480-mRNA-1 |
| chr2_4 | exon | 10230707 | 10230931 | 10230707 | ID=Msa0314480-mRNA-1:exon:3945;Parent=Msa0314480-mRNA-1 |
| chr2_4 | exon | 10231289 | 10231622 | 10231289 | ID=Msa0314480-mRNA-1:exon:3944;Parent=Msa0314480-mRNA-1 |
| chr2_4 | five_prime_UTR | 10231406 | 10231622 | 10231406 | ID=Msa0314480-mRNA-1:five_prime_utr;Parent=Msa0314480-mRNA-1 |
| chr2_4 | CDS | 10231289 | 10231405 | 10231289 | ID=Msa0314480-mRNA-1:cds;Parent=Msa0314480-mRNA-1 |
| chr2_4 | CDS | 10230707 | 10230931 | 10230707 | ID=Msa0314480-mRNA-1:cds;Parent=Msa0314480-mRNA-1 |
| chr2_4 | CDS | 10229914 | 10230111 | 10229914 | ID=Msa0314480-mRNA-1:cds;Parent=Msa0314480-mRNA-1 |
| chr2_4 | CDS | 10229403 | 10229464 | 10229403 | ID=Msa0314480-mRNA-1:cds;Parent=Msa0314480-mRNA-1 |
| chr2_4 | CDS | 10228824 | 10229043 | 10228824 | ID=Msa0314480-mRNA-1:cds;Parent=Msa0314480-mRNA-1 |
| chr2_4 | three_prime_UTR | 10228551 | 10228823 | 10228551 | ID=Msa0314480-mRNA-1:three_prime_utr;Parent=Msa0314480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
