Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136110 | sp|Q9LJN4|BXL5_ARATH | 70.658 | 760 | 208 | 8 | 21 | 774 | 23 | 773 | 0.0 | 1115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136110 | G7IEW2 | 97.567 | 781 | 19 | 0 | 1 | 781 | 1 | 781 | 0.0 | 1580 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041730 | Msa0136110 | 0.820753 | 5.806322e-53 | -8.615850e-47 |
| Msa0136080 | Msa0136110 | 0.997981 | 2.193410e-253 | -8.615850e-47 |
| Msa0136110 | Msa0194280 | 0.811435 | 7.013025e-51 | -8.615850e-47 |
| Msa0136110 | Msa0314480 | 0.808976 | 2.376577e-50 | -8.615850e-47 |
| Msa0136110 | Msa0716560 | 0.853348 | 2.535689e-61 | -8.615850e-47 |
| Msa0136110 | Msa0757950 | 0.851941 | 6.393178e-61 | -8.615850e-47 |
| Msa0136110 | Msa0810480 | 0.861328 | 1.108407e-63 | -8.615850e-47 |
| Msa0136110 | Msa0825230 | 0.816946 | 4.255286e-52 | -8.615850e-47 |
| Msa0136110 | Msa1269080 | 0.855490 | 6.091300e-62 | -8.615850e-47 |
| Msa0136110 | Msa1344320 | 0.870274 | 1.651725e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136110 | MtrunA17_Chr1g0207281 | 97.567 | 781 | 19 | 0 | 1 | 781 | 17 | 797 | 0.0 | 1579 |
| Msa0136110 | MtrunA17_Chr2g0278761 | 55.906 | 762 | 317 | 8 | 5 | 759 | 16 | 765 | 0.0 | 867 |
| Msa0136110 | MtrunA17_Chr4g0050591 | 54.688 | 768 | 318 | 9 | 6 | 759 | 13 | 764 | 0.0 | 855 |
| Msa0136110 | MtrunA17_Chr1g0194841 | 54.222 | 758 | 334 | 6 | 3 | 759 | 2 | 747 | 0.0 | 844 |
| Msa0136110 | MtrunA17_Chr7g0269871 | 53.804 | 736 | 328 | 6 | 25 | 759 | 29 | 753 | 0.0 | 825 |
| Msa0136110 | MtrunA17_Chr2g0294751 | 53.197 | 735 | 328 | 5 | 25 | 759 | 28 | 746 | 0.0 | 809 |
| Msa0136110 | MtrunA17_Chr5g0425471 | 49.054 | 793 | 369 | 15 | 4 | 774 | 3 | 782 | 0.0 | 767 |
| Msa0136110 | MtrunA17_Chr5g0425431 | 49.737 | 760 | 360 | 13 | 24 | 774 | 34 | 780 | 0.0 | 759 |
| Msa0136110 | MtrunA17_Chr5g0411571 | 48.920 | 787 | 369 | 11 | 8 | 774 | 9 | 782 | 0.0 | 756 |
| Msa0136110 | MtrunA17_Chr3g0115601 | 50.067 | 749 | 347 | 11 | 25 | 759 | 31 | 766 | 0.0 | 755 |
| Msa0136110 | MtrunA17_Chr5g0425451 | 48.597 | 784 | 377 | 15 | 5 | 776 | 15 | 784 | 0.0 | 753 |
| Msa0136110 | MtrunA17_Chr5g0425531 | 48.120 | 798 | 372 | 16 | 4 | 774 | 3 | 785 | 0.0 | 742 |
| Msa0136110 | MtrunA17_Chr6g0461231 | 26.269 | 670 | 348 | 29 | 32 | 625 | 22 | 621 | 5.80e-37 | 147 |
| Msa0136110 | MtrunA17_Chr7g0253561 | 27.083 | 624 | 337 | 27 | 38 | 591 | 4 | 579 | 2.91e-35 | 142 |
| Msa0136110 | MtrunA17_Chr6g0461191 | 26.778 | 661 | 326 | 32 | 47 | 625 | 37 | 621 | 1.89e-34 | 140 |
| Msa0136110 | MtrunA17_Chr3g0118971 | 25.786 | 636 | 362 | 29 | 48 | 625 | 38 | 621 | 1.54e-32 | 134 |
| Msa0136110 | MtrunA17_Chr6g0461221 | 25.284 | 617 | 339 | 25 | 47 | 591 | 38 | 604 | 4.39e-32 | 133 |
| Msa0136110 | MtrunA17_Chr6g0461211 | 25.938 | 613 | 340 | 25 | 47 | 591 | 37 | 603 | 2.86e-30 | 127 |
| Msa0136110 | MtrunA17_Chr2g0292341 | 25.728 | 618 | 333 | 27 | 48 | 591 | 40 | 605 | 1.17e-29 | 125 |
| Msa0136110 | MtrunA17_Chr5g0429581 | 25.735 | 544 | 314 | 24 | 73 | 581 | 85 | 573 | 3.50e-27 | 117 |
| Msa0136110 | MtrunA17_Chr3g0104081 | 25.077 | 650 | 345 | 26 | 11 | 581 | 3 | 589 | 3.91e-27 | 117 |
| Msa0136110 | MtrunA17_Chr7g0253551 | 26.757 | 441 | 236 | 19 | 38 | 423 | 29 | 437 | 2.52e-25 | 110 |
| Msa0136110 | MtrunA17_Chr5g0429541 | 25.093 | 538 | 311 | 23 | 73 | 581 | 85 | 559 | 3.98e-25 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136110 | AT3G19620.1 | 70.658 | 760 | 208 | 8 | 21 | 774 | 23 | 773 | 0.0 | 1115 |
| Msa0136110 | AT5G64570.1 | 55.683 | 783 | 315 | 12 | 4 | 774 | 22 | 784 | 0.0 | 866 |
| Msa0136110 | AT5G09730.1 | 53.350 | 791 | 330 | 16 | 2 | 774 | 4 | 773 | 0.0 | 834 |
| Msa0136110 | AT1G02640.1 | 53.117 | 770 | 333 | 8 | 3 | 763 | 4 | 754 | 0.0 | 828 |
| Msa0136110 | AT5G49360.1 | 53.264 | 766 | 338 | 10 | 1 | 759 | 10 | 762 | 0.0 | 813 |
| Msa0136110 | AT5G10560.1 | 48.745 | 757 | 351 | 9 | 31 | 759 | 35 | 782 | 0.0 | 742 |
| Msa0136110 | AT1G78060.1 | 48.212 | 755 | 377 | 9 | 14 | 761 | 12 | 759 | 0.0 | 732 |
| Msa0136110 | AT5G64570.3 | 61.446 | 581 | 210 | 8 | 4 | 578 | 22 | 594 | 0.0 | 726 |
| Msa0136110 | AT5G64570.2 | 55.418 | 646 | 259 | 10 | 138 | 774 | 1 | 626 | 0.0 | 715 |
| Msa0136110 | AT5G09700.1 | 47.887 | 497 | 236 | 7 | 286 | 774 | 45 | 526 | 4.08e-157 | 468 |
| Msa0136110 | AT3G47040.4 | 25.571 | 657 | 364 | 30 | 38 | 628 | 10 | 607 | 2.48e-32 | 134 |
| Msa0136110 | AT3G47010.1 | 25.801 | 624 | 371 | 25 | 32 | 599 | 5 | 592 | 4.51e-32 | 132 |
| Msa0136110 | AT3G62710.1 | 27.036 | 614 | 348 | 31 | 45 | 624 | 101 | 648 | 5.42e-32 | 133 |
| Msa0136110 | AT3G47000.1 | 25.307 | 652 | 366 | 25 | 38 | 625 | 10 | 604 | 7.16e-32 | 132 |
| Msa0136110 | AT5G20950.2 | 25.309 | 648 | 357 | 28 | 48 | 629 | 36 | 622 | 1.40e-30 | 128 |
| Msa0136110 | AT5G20950.1 | 25.309 | 648 | 357 | 28 | 48 | 629 | 36 | 622 | 1.40e-30 | 128 |
| Msa0136110 | AT5G20950.3 | 25.309 | 648 | 357 | 28 | 48 | 629 | 114 | 700 | 2.08e-30 | 128 |
| Msa0136110 | AT3G47010.2 | 24.960 | 621 | 379 | 23 | 32 | 599 | 5 | 591 | 4.89e-30 | 126 |
| Msa0136110 | AT3G47050.1 | 25.980 | 612 | 364 | 24 | 35 | 591 | 7 | 584 | 1.13e-29 | 125 |
| Msa0136110 | AT5G04885.3 | 26.316 | 551 | 323 | 24 | 72 | 592 | 108 | 605 | 5.19e-29 | 124 |
| Msa0136110 | AT5G04885.1 | 26.316 | 551 | 323 | 24 | 72 | 592 | 108 | 605 | 5.19e-29 | 124 |
| Msa0136110 | AT5G04885.2 | 26.316 | 551 | 323 | 24 | 72 | 592 | 125 | 622 | 5.20e-29 | 124 |
| Msa0136110 | AT3G47040.1 | 25.037 | 683 | 360 | 32 | 38 | 628 | 10 | 632 | 8.86e-29 | 123 |
| Msa0136110 | AT3G47000.3 | 28.000 | 450 | 226 | 18 | 38 | 423 | 10 | 425 | 1.87e-27 | 117 |
| Msa0136110 | AT3G47040.3 | 27.169 | 438 | 245 | 18 | 38 | 423 | 10 | 425 | 3.12e-26 | 113 |
| Msa0136110 | AT5G20940.1 | 27.306 | 553 | 309 | 26 | 73 | 591 | 111 | 604 | 1.51e-25 | 112 |
| Msa0136110 | AT3G47010.4 | 27.540 | 443 | 249 | 18 | 32 | 423 | 5 | 426 | 8.89e-25 | 108 |
| Msa0136110 | AT3G47010.3 | 25.060 | 415 | 270 | 16 | 199 | 599 | 26 | 413 | 4.07e-20 | 94.4 |
| Msa0136110 | AT3G47050.2 | 26.133 | 375 | 219 | 14 | 35 | 365 | 7 | 367 | 1.25e-17 | 86.3 |
| Msa0136110 | AT3G47000.2 | 24.242 | 462 | 292 | 20 | 183 | 625 | 5 | 427 | 2.67e-17 | 85.9 |
Find 180 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGGCTGGTTTGACATTT+TGG | 0.130488 | 1_3:-67904776 | Msa0136110:CDS |
| CAGTAAAATAAAGTTGTTTC+TGG | 0.208407 | 1_3:-67901480 | Msa0136110:three_prime_UTR |
| GCAACATAGGAGGGATATTA+TGG | 0.220056 | 1_3:-67902851 | Msa0136110:CDS |
| TGAAACATTATGGTACAAAA+TGG | 0.221947 | 1_3:-67904841 | Msa0136110:CDS |
| CTGCTTATGATGTTGATAAT+TGG | 0.227264 | 1_3:-67904572 | Msa0136110:CDS |
| AGGGAAATTTCTACTGATAT+TGG | 0.228239 | 1_3:+67902113 | None:intergenic |
| GCCATAGCACAAGTAATATT+TGG | 0.228912 | 1_3:-67902798 | Msa0136110:CDS |
| GGGAAATCCCTCTATGAATT+TGG | 0.249033 | 1_3:-67902066 | Msa0136110:CDS |
| GTGTCATGTGCTCATATAAT+AGG | 0.254476 | 1_3:-67904271 | Msa0136110:CDS |
| GATTGTGGATACCATGTAAA+TGG | 0.264876 | 1_3:+67902177 | None:intergenic |
| TCCAACACACAGCTCTTAAA+TGG | 0.278527 | 1_3:+67904308 | None:intergenic |
| TTATTACCTTAGCATCAAAA+TGG | 0.295146 | 1_3:+67904532 | None:intergenic |
| CAAAGAAGCCAAGTCTCATT+AGG | 0.298010 | 1_3:+67903414 | None:intergenic |
| TGTCAAATTCAAACAACTTA+TGG | 0.308883 | 1_3:+67901909 | None:intergenic |
| AATCCTATCAATTGTTTCAA+TGG | 0.312892 | 1_3:+67901784 | None:intergenic |
| TAAAACCTGTATGTTCTTCC+AGG | 0.325928 | 1_3:+67902093 | None:intergenic |
| GCCCTTCTGCTTCTATAGAT+TGG | 0.325933 | 1_3:+67903009 | None:intergenic |
| GATAGTGAAGTGTTGCAAAA+TGG | 0.335511 | 1_3:+67905092 | None:intergenic |
| AGCCTTGAAATGCCGGTAGA+AGG | 0.350533 | 1_3:+67904999 | None:intergenic |
| GATTGGACAGCACACTATTC+TGG | 0.361517 | 1_3:-67901656 | Msa0136110:CDS |
| AGAGGCCAGTGGGGTCTAGA+TGG | 0.363411 | 1_3:-67904197 | Msa0136110:CDS |
| GTTCCATTGAAACAATTGAT+AGG | 0.364046 | 1_3:-67901787 | Msa0136110:CDS |
| CACCACATTGATATTACAAT+TGG | 0.364152 | 1_3:-67901604 | Msa0136110:CDS |
| GCAAGAGCCACTGCATCTTC+AGG | 0.368484 | 1_3:+67903670 | None:intergenic |
| GACTAAAATCAATGTTCCTT+TGG | 0.370514 | 1_3:+67902920 | None:intergenic |
| AGCTATGTACAATGTGGATT+TGG | 0.386393 | 1_3:-67904793 | Msa0136110:CDS |
| TTCTGGATCATTATAGTAGA+AGG | 0.386843 | 1_3:+67901997 | None:intergenic |
| AGAGTTAACTTGACATTGCC+TGG | 0.387425 | 1_3:-67902981 | Msa0136110:CDS |
| TTAGTGAAAGAAATATCAAT+TGG | 0.388314 | 1_3:+67902882 | None:intergenic |
| CCACTCACCACTTCTGAACT+TGG | 0.388607 | 1_3:+67901811 | None:intergenic |
| TTTGCAAATGGAAGTGACTT+TGG | 0.397416 | 1_3:+67903386 | None:intergenic |
| TTGCAAATGGAAGTGACTTT+GGG | 0.402569 | 1_3:+67903387 | None:intergenic |
| AACTCCAGGGGAAGATCCTT+TGG | 0.404077 | 1_3:-67904703 | Msa0136110:CDS |
| CATTACTATGTGGTAGTGTA+AGG | 0.406462 | 1_3:-67901436 | Msa0136110:three_prime_UTR |
| TGCTAAAGATGATAGGCTTA+AGG | 0.408182 | 1_3:-67904619 | Msa0136110:CDS |
| GATACAGTGGTGTTGGTTGT+TGG | 0.412529 | 1_3:-67903038 | Msa0136110:CDS |
| ACTGTGGTGGCATTTGCATT+TGG | 0.412568 | 1_3:+67903221 | None:intergenic |
| CTCATGTTCATGTCTGTCAT+TGG | 0.420175 | 1_3:+67902138 | None:intergenic |
| AAAGAGCACAAGTTAAGGTT+GGG | 0.420572 | 1_3:-67901759 | Msa0136110:CDS |
| ACAAGCTTCTCTTGAAATCC+AGG | 0.424917 | 1_3:+67902963 | None:intergenic |
| TCTACCGGCATTTCAAGGCT+TGG | 0.426574 | 1_3:-67904996 | Msa0136110:CDS |
| TAACCATAACTATAGTATAT+TGG | 0.429000 | 1_3:-67901530 | Msa0136110:three_prime_UTR |
| ACCCTTCTACCGGCATTTCA+AGG | 0.433066 | 1_3:-67905001 | Msa0136110:CDS |
| AGTGGTGTTGGTTGTTGGAT+TGG | 0.437442 | 1_3:-67903033 | Msa0136110:CDS |
| ACTTCTGTAGTCCTTGTAAA+GGG | 0.438650 | 1_3:+67903156 | None:intergenic |
| TACTTCTGTAGTCCTTGTAA+AGG | 0.441252 | 1_3:+67903155 | None:intergenic |
| CACTAAAGAAAATCAGCAAT+TGG | 0.455452 | 1_3:-67903342 | Msa0136110:CDS |
| ATTTGAAAGAGCACAAGTTA+AGG | 0.457325 | 1_3:-67901764 | Msa0136110:CDS |
| TTTGTGTTATGTTGGAGATA+TGG | 0.460291 | 1_3:+67905233 | None:intergenic |
| AAGCAAGTGCTAAAGATGAT+AGG | 0.460961 | 1_3:-67904626 | Msa0136110:CDS |
| TGCTCATATAATAGGGTGAA+TGG | 0.462881 | 1_3:-67904263 | Msa0136110:CDS |
| TTGGTGTTCCTGCTTATGAA+TGG | 0.463212 | 1_3:-67904977 | Msa0136110:CDS |
| ATTACACCTTGGAGAAGGTC+TGG | 0.463689 | 1_3:+67904221 | None:intergenic |
| GAAACATTATGGTACAAAAT+GGG | 0.466706 | 1_3:-67904840 | Msa0136110:CDS |
| GAAAGAGCACAAGTTAAGGT+TGG | 0.467163 | 1_3:-67901760 | Msa0136110:CDS |
| ATCTATAGAAGCAGAAGGGC+TGG | 0.468944 | 1_3:-67903006 | Msa0136110:CDS |
| TGTCATGTGCTCATATAATA+GGG | 0.473992 | 1_3:-67904270 | Msa0136110:CDS |
| AATCAGTTACAGCCTTACAT+AGG | 0.476657 | 1_3:+67901411 | None:intergenic |
| CAGGGACGCGTTTCGATAGC+AGG | 0.477482 | 1_3:-67904917 | Msa0136110:CDS |
| TAGTGTAAGGGCCCTATGTA+AGG | 0.478854 | 1_3:-67901423 | Msa0136110:three_prime_UTR |
| TCCCTCTATGAATTTGGCTA+TGG | 0.484680 | 1_3:-67902060 | Msa0136110:CDS |
| CTCTGCTGATACAGTGGTGT+TGG | 0.484940 | 1_3:-67903045 | Msa0136110:CDS |
| ATTTAAGAGCTGTGTGTTGG+AGG | 0.484967 | 1_3:-67904306 | Msa0136110:CDS |
| ACTAAAAGTGTAAGCAACAT+AGG | 0.484978 | 1_3:-67902864 | Msa0136110:CDS |
| TGACACTAAGTCCTTGGCTC+TGG | 0.485207 | 1_3:+67905061 | None:intergenic |
| TCACTTCCATTTGCAAACCT+TGG | 0.486006 | 1_3:-67903380 | Msa0136110:CDS |
| ATTTCCCTGGAAGAACATAC+AGG | 0.486697 | 1_3:-67902098 | Msa0136110:CDS |
| AACACCAAGCCTTGAAATGC+CGG | 0.491966 | 1_3:+67904992 | None:intergenic |
| TATGCTGTAAATTATGTTCG+TGG | 0.495123 | 1_3:-67904669 | Msa0136110:CDS |
| CAACATAGGAGGGATATTAT+GGG | 0.496768 | 1_3:-67902850 | Msa0136110:CDS |
| ATTGTGGATACCATGTAAAT+GGG | 0.498218 | 1_3:+67902178 | None:intergenic |
| CGATATTCAAGCCCTTTACA+AGG | 0.501394 | 1_3:-67903167 | Msa0136110:CDS |
| TCCAAATATTACTTGTGCTA+TGG | 0.501814 | 1_3:+67902797 | None:intergenic |
| TAGTGAAAGAAATATCAATT+GGG | 0.504026 | 1_3:+67902883 | None:intergenic |
| TCCATTTAAGAGCTGTGTGT+TGG | 0.505176 | 1_3:-67904309 | Msa0136110:CDS |
| ATGTACAATGTGGATTTGGC+TGG | 0.507340 | 1_3:-67904789 | Msa0136110:CDS |
| GATGGTCCAAGGTTTGCAAA+TGG | 0.509359 | 1_3:+67903374 | None:intergenic |
| GCCTTGAAATGCCGGTAGAA+GGG | 0.510160 | 1_3:+67905000 | None:intergenic |
| ATATTATGGGTAGGTTATCC+TGG | 0.512772 | 1_3:-67902837 | Msa0136110:CDS |
| CTTGTAAAGGGCTTGAATAT+CGG | 0.513958 | 1_3:+67903168 | None:intergenic |
| ATATTTGGAGACTATAACCC+AGG | 0.518089 | 1_3:-67902783 | Msa0136110:intron |
| CTGCTATCGAAACGCGTCCC+TGG | 0.518333 | 1_3:+67904918 | None:intergenic |
| ATACCAATATACTATAGTTA+TGG | 0.520437 | 1_3:+67901527 | None:intergenic |
| GCAGGTGACAAAGCAAGACT+TGG | 0.520570 | 1_3:-67904348 | Msa0136110:intron |
| TCTTTAGTGCATACATCAGA+TGG | 0.520982 | 1_3:+67903356 | None:intergenic |
| TGGTGGTCAGAGGCACTTCA+TGG | 0.521560 | 1_3:-67904957 | Msa0136110:CDS |
| GGTGACAAAGCAAGACTTGG+AGG | 0.523632 | 1_3:-67904345 | Msa0136110:CDS |
| CGTTTCGATAGCAGGGTACC+TGG | 0.524275 | 1_3:-67904909 | Msa0136110:CDS |
| TCAAGGAAGATATTATTAAG+TGG | 0.524739 | 1_3:+67901955 | None:intergenic |
| TATCAATTGCTTGATCATCA+AGG | 0.526561 | 1_3:+67901938 | None:intergenic |
| GGTAAACGAAAGTTGGTGAT+TGG | 0.526693 | 1_3:-67901673 | Msa0136110:CDS |
| GTGGCTCTTGCACTGAAAGC+AGG | 0.529634 | 1_3:-67903658 | Msa0136110:intron |
| TGTAGTTGTATACCAGGGCT+TGG | 0.535216 | 1_3:+67903441 | None:intergenic |
| GGACTATGTAGTTGTATACC+AGG | 0.535357 | 1_3:+67903435 | None:intergenic |
| ATCAGTTACAGCCTTACATA+GGG | 0.538855 | 1_3:+67901412 | None:intergenic |
| CTTCATGGTGTCTCAAATGT+AGG | 0.539417 | 1_3:-67904942 | Msa0136110:CDS |
| AATATCAGTAGAAATTTCCC+TGG | 0.539925 | 1_3:-67902111 | Msa0136110:CDS |
| GGGCGTGGACAAGAAACTCC+AGG | 0.541036 | 1_3:-67904717 | Msa0136110:CDS |
| TTTAAGAGCTGTGTGTTGGA+GGG | 0.541333 | 1_3:-67904305 | Msa0136110:CDS |
| GTTCGTGGACTACAAGAAGT+TGG | 0.541602 | 1_3:-67904654 | Msa0136110:CDS |
| GGCAGCCTCTGCTGATACAG+TGG | 0.544457 | 1_3:-67903051 | Msa0136110:CDS |
| AGAAGGAGCAGATGCTATGT+GGG | 0.551576 | 1_3:+67902014 | None:intergenic |
| ACCACATGAGATCCATCAAA+AGG | 0.551827 | 1_3:+67901853 | None:intergenic |
| ATAATTGGAAAGGCGTTGAT+CGG | 0.552315 | 1_3:-67904557 | Msa0136110:CDS |
| GGACAGCACACTATTCTGGT+TGG | 0.552636 | 1_3:-67901652 | Msa0136110:CDS |
| ATCCATAGCCAAATTCATAG+AGG | 0.557580 | 1_3:+67902058 | None:intergenic |
| TAAGCGTGACACTAAGTCCT+TGG | 0.559465 | 1_3:+67905055 | None:intergenic |
| GTTATGATTAGTAACTATGC+TGG | 0.561465 | 1_3:-67903200 | Msa0136110:CDS |
| CTCTGATTACACCTTGGAGA+AGG | 0.562519 | 1_3:+67904216 | None:intergenic |
| GAGGCCAGTGGGGTCTAGAT+GGG | 0.564760 | 1_3:-67904196 | Msa0136110:intron |
| GCAGCTGATAGTATCACTGC+TGG | 0.566392 | 1_3:+67904873 | None:intergenic |
| TAAAATAAAGTTGTTTCTGG+AGG | 0.569057 | 1_3:-67901477 | Msa0136110:three_prime_UTR |
| AAAACCTGTATGTTCTTCCA+GGG | 0.569628 | 1_3:+67902094 | None:intergenic |
| CTCACCACTTCTGAACTTGG+TGG | 0.569744 | 1_3:+67901814 | None:intergenic |
| TCTGACCACCATTCATAAGC+AGG | 0.570631 | 1_3:+67904969 | None:intergenic |
| TGTTTCAGACTGTGATTCAG+TGG | 0.570986 | 1_3:-67903728 | Msa0136110:CDS |
| GCTCTAGAAGCTGCGAAGCA+AGG | 0.571329 | 1_3:-67903320 | Msa0136110:CDS |
| GGTGTCTCAAATGTAGGACC+AGG | 0.572126 | 1_3:-67904936 | Msa0136110:CDS |
| GTGTTCCTGCTTATGAATGG+TGG | 0.572399 | 1_3:-67904974 | Msa0136110:CDS |
| TGCATACATCAGATGGTCCA+AGG | 0.572554 | 1_3:+67903363 | None:intergenic |
| AAAAGTGTAAGCAACATAGG+AGG | 0.573233 | 1_3:-67902861 | Msa0136110:CDS |
| AGGTGTAATCAGAGGCCAGT+GGG | 0.573573 | 1_3:-67904207 | Msa0136110:CDS |
| GTAGGTTATCCTGGTCAAGA+TGG | 0.574821 | 1_3:-67902828 | Msa0136110:CDS |
| TACATAGTCCTAATGAGACT+TGG | 0.576502 | 1_3:-67903422 | Msa0136110:CDS |
| TAGAAGGAGCAGATGCTATG+TGG | 0.577310 | 1_3:+67902013 | None:intergenic |
| TCCATAGCCAAATTCATAGA+GGG | 0.577492 | 1_3:+67902059 | None:intergenic |
| TAGTGATGGTAAACGAAAGT+TGG | 0.578355 | 1_3:-67901680 | Msa0136110:CDS |
| GGAGCCACCAAGTTCAGAAG+TGG | 0.580834 | 1_3:-67901818 | Msa0136110:CDS |
| ATCTATTGTAGACCAAGCCC+TGG | 0.580878 | 1_3:-67903453 | Msa0136110:CDS |
| CAAATTCAAACAACTTATGG+TGG | 0.582768 | 1_3:+67901912 | None:intergenic |
| GCATTTCCTCCATCTTGACC+AGG | 0.588584 | 1_3:+67902819 | None:intergenic |
| ATTACTATGTGGTAGTGTAA+GGG | 0.592903 | 1_3:-67901435 | Msa0136110:three_prime_UTR |
| GTGGTAGGTCCCCATTTACA+TGG | 0.594929 | 1_3:-67902188 | Msa0136110:CDS |
| CAACTAGTAAACCCTTCTAC+CGG | 0.596049 | 1_3:-67905011 | Msa0136110:CDS |
| ACAACCAAAGGATCTTCCCC+TGG | 0.596108 | 1_3:+67904699 | None:intergenic |
| GGCGTGGACAAGAAACTCCA+GGG | 0.596923 | 1_3:-67904716 | Msa0136110:CDS |
| GACCAATCTATAGAAGCAGA+AGG | 0.600841 | 1_3:-67903011 | Msa0136110:CDS |
| TGCTATGTGGGTAGAGAATG+TGG | 0.601022 | 1_3:+67902026 | None:intergenic |
| CTAAGTAATGTTGATAGTGA+TGG | 0.602583 | 1_3:-67901694 | Msa0136110:CDS |
| TGCTTATGAATGGTGGTCAG+AGG | 0.605760 | 1_3:-67904967 | Msa0136110:CDS |
| ATCTTATGAAACCAGAGCCA+AGG | 0.606136 | 1_3:-67905072 | Msa0136110:CDS |
| TCTTCAGTAACTTACGCGCA+TGG | 0.611081 | 1_3:-67903128 | Msa0136110:CDS |
| AAAGTGTAAGCAACATAGGA+GGG | 0.615065 | 1_3:-67902860 | Msa0136110:CDS |
| TATGATGTTGATAATTGGAA+AGG | 0.616039 | 1_3:-67904567 | Msa0136110:CDS |
| GTTTCTGGAGGTGATGAGCA+TGG | 0.620873 | 1_3:-67901465 | Msa0136110:three_prime_UTR |
| AGGTCTGGATCAGCACATGT+AGG | 0.621412 | 1_3:+67904236 | None:intergenic |
| AAAGACTCCTGAAGATGCAG+TGG | 0.622680 | 1_3:-67903677 | Msa0136110:CDS |
| GTGATTGGTGTGAAGAACAA+TGG | 0.624345 | 1_3:-67901877 | Msa0136110:CDS |
| GATGTGGCTGCTGCTACCAA+AGG | 0.627255 | 1_3:-67902936 | Msa0136110:CDS |
| GGTTATCCTGGTCAAGATGG+AGG | 0.630089 | 1_3:-67902825 | Msa0136110:CDS |
| GTTACTAATCATAACTGTGG+TGG | 0.637990 | 1_3:+67903208 | None:intergenic |
| ACTGGCCTCTGATTACACCT+TGG | 0.640961 | 1_3:+67904210 | None:intergenic |
| CATTGATATTACAATTGGAG+AGG | 0.641938 | 1_3:-67901599 | Msa0136110:CDS |
| CTTCTCCAAGGTGTAATCAG+AGG | 0.642134 | 1_3:-67904215 | Msa0136110:CDS |
| CAAACCCATCTAGACCCCAC+TGG | 0.647961 | 1_3:+67904192 | None:intergenic |
| ACTTGATCGACATATGATTG+TGG | 0.652204 | 1_3:+67902162 | None:intergenic |
| GCTGGAAAGCTAGTAGCACC+AGG | 0.654050 | 1_3:+67904891 | None:intergenic |
| AACACACAGCTCTTAAATGG+AGG | 0.654259 | 1_3:+67904311 | None:intergenic |
| GCTGATCCAGACCTTCTCCA+AGG | 0.658385 | 1_3:-67904227 | Msa0136110:CDS |
| ATAGGAGGGATATTATGGGT+AGG | 0.660257 | 1_3:-67902846 | Msa0136110:CDS |
| ACCAATCTATAGAAGCAGAA+GGG | 0.660435 | 1_3:-67903010 | Msa0136110:CDS |
| GACTATGTAGTTGTATACCA+GGG | 0.665456 | 1_3:+67903436 | None:intergenic |
| CCAAGTTCAGAAGTGGTGAG+TGG | 0.668174 | 1_3:-67901811 | Msa0136110:CDS |
| AGCTAGAGCTATGTACAATG+TGG | 0.670531 | 1_3:-67904799 | Msa0136110:CDS |
| TACATGATAACAGTAGCTAG+TGG | 0.672904 | 1_3:+67901504 | None:intergenic |
| CTCCAATTGTAATATCAATG+TGG | 0.675550 | 1_3:+67901602 | None:intergenic |
| CAACACCACTGTATCAGCAG+AGG | 0.676614 | 1_3:+67903046 | None:intergenic |
| AAAGGGCTTGAATATCGGCA+TGG | 0.678069 | 1_3:+67903173 | None:intergenic |
| ATAGTTACTAATCATAACTG+TGG | 0.682010 | 1_3:+67903205 | None:intergenic |
| AGGGACGCGTTTCGATAGCA+GGG | 0.694015 | 1_3:-67904916 | Msa0136110:CDS |
| AAGGTGTAATCAGAGGCCAG+TGG | 0.694576 | 1_3:-67904208 | Msa0136110:CDS |
| GCATATCTAGAAACAACCAA+AGG | 0.695865 | 1_3:+67904687 | None:intergenic |
| ATGGTGGTAACATTACTATG+TGG | 0.697084 | 1_3:-67901446 | Msa0136110:three_prime_UTR |
| GCGTGGACAAGAAACTCCAG+GGG | 0.698903 | 1_3:-67904715 | Msa0136110:CDS |
| GTGTCTCAAATGTAGGACCA+GGG | 0.699223 | 1_3:-67904935 | Msa0136110:CDS |
| AGAGAAGCTTGTGAAAGATG+TGG | 0.705643 | 1_3:-67902952 | Msa0136110:CDS |
| GGTGTAATCAGAGGCCAGTG+GGG | 0.715668 | 1_3:-67904206 | Msa0136110:CDS |
| TTGTGGATACCATGTAAATG+GGG | 0.746412 | 1_3:+67902179 | None:intergenic |
| GCAGGTTTAAACATGAACTG+CGG | 0.750864 | 1_3:-67903530 | Msa0136110:intron |
| TCTGGAGGTGATGAGCATGG+TGG | 0.795406 | 1_3:-67901462 | Msa0136110:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATCTTAGTTTTTGATAA+AGG | + | chr1_3:67903330-67903349 | None:intergenic | 15.0% |
| !! | AAAAACTAAGATAAAAACTT+TGG | - | chr1_3:67903335-67903354 | Msa0136110:CDS | 15.0% |
| !! | AAATATGTAAAGATAAATGT+AGG | + | chr1_3:67903861-67903880 | None:intergenic | 15.0% |
| !!! | GCTATTATAAATTGATAATT+AGG | + | chr1_3:67904083-67904102 | None:intergenic | 15.0% |
| !! | AAAATAAAAGTTTATGTGTT+TGG | + | chr1_3:67904302-67904321 | None:intergenic | 15.0% |
| !!! | ACAGTGAAAATTTTATTTAT+AGG | - | chr1_3:67904380-67904399 | Msa0136110:intron | 15.0% |
| !!! | CTAGTTTTAATGAAACATTA+TGG | - | chr1_3:67901739-67901758 | Msa0136110:CDS | 20.0% |
| !! | GTAAAAATATTTAACACGTT+CGG | + | chr1_3:67902174-67902193 | None:intergenic | 20.0% |
| !! | AAAAATCAAATGATTGCTTA+GGG | + | chr1_3:67902431-67902450 | None:intergenic | 20.0% |
| !! | AAAAAATCAAATGATTGCTT+AGG | + | chr1_3:67902432-67902451 | None:intergenic | 20.0% |
| !! | TCAACTAAATCCTATATTTA+GGG | + | chr1_3:67902543-67902562 | None:intergenic | 20.0% |
| !! | TTGACTAAATTACTAGAATT+TGG | - | chr1_3:67902559-67902578 | Msa0136110:intron | 20.0% |
| !!! | AATTAGTAGTATTGTTTTAC+AGG | - | chr1_3:67902614-67902633 | Msa0136110:intron | 20.0% |
| !! | TCTATCATAGTATTTATTAC+AGG | - | chr1_3:67902657-67902676 | Msa0136110:intron | 20.0% |
| !!! | CAAAAAAGTATAAGATATCA+GGG | + | chr1_3:67902831-67902850 | None:intergenic | 20.0% |
| !!! | TCAAAAAAGTATAAGATATC+AGG | + | chr1_3:67902832-67902851 | None:intergenic | 20.0% |
| !! | TATTGGATTATTAAATGGTA+TGG | - | chr1_3:67903024-67903043 | Msa0136110:CDS | 20.0% |
| !!! | AACATTGATTTTAGTCATAA+TGG | - | chr1_3:67903677-67903696 | Msa0136110:CDS | 20.0% |
| !! | TAGTGAAAGAAATATCAATT+GGG | + | chr1_3:67903710-67903729 | None:intergenic | 20.0% |
| !! | TTAGTGAAAGAAATATCAAT+TGG | + | chr1_3:67903711-67903730 | None:intergenic | 20.0% |
| !!! | AATGTTTTTTTAACTGTCAT+AGG | + | chr1_3:67903889-67903908 | None:intergenic | 20.0% |
| !! | TTGATTCATAAAAATCAGTT+TGG | - | chr1_3:67904116-67904135 | Msa0136110:intron | 20.0% |
| !!! | GTGAAAATTTTATTTATAGG+TGG | - | chr1_3:67904383-67904402 | Msa0136110:intron | 20.0% |
| !!! | AAATTTTATTTATAGGTGGT+AGG | - | chr1_3:67904387-67904406 | Msa0136110:intron | 20.0% |
| !!! | ATTATTAAGTGGTTTTGAAA+TGG | + | chr1_3:67904627-67904646 | None:intergenic | 20.0% |
| !! | TAACCATAACTATAGTATAT+TGG | - | chr1_3:67905060-67905079 | Msa0136110:CDS | 20.0% |
| !! | ATACCAATATACTATAGTTA+TGG | + | chr1_3:67905066-67905085 | None:intergenic | 20.0% |
| !!! | TTACAAGTTTTGTGTTATGT+TGG | + | chr1_3:67901368-67901387 | None:intergenic | 25.0% |
| ! | TGAAACATTATGGTACAAAA+TGG | - | chr1_3:67901749-67901768 | Msa0136110:CDS | 25.0% |
| ! | GAAACATTATGGTACAAAAT+GGG | - | chr1_3:67901750-67901769 | Msa0136110:CDS | 25.0% |
| !!! | TATGATGTTGATAATTGGAA+AGG | - | chr1_3:67902023-67902042 | Msa0136110:CDS | 25.0% |
| ! | TTATTACCTTAGCATCAAAA+TGG | + | chr1_3:67902061-67902080 | None:intergenic | 25.0% |
| ! | TATCACCATGTAGATATTTA+CGG | - | chr1_3:67902211-67902230 | Msa0136110:intron | 25.0% |
| ! | TAGTTTATCATAGCTATCAT+AGG | + | chr1_3:67902506-67902525 | None:intergenic | 25.0% |
| ! | GTCAACTAAATCCTATATTT+AGG | + | chr1_3:67902544-67902563 | None:intergenic | 25.0% |
| ! | ATTACTAGAATTTGGAAAGT+TGG | - | chr1_3:67902567-67902586 | Msa0136110:intron | 25.0% |
| ! | TTTATTACAGGTTGTAGAAA+AGG | - | chr1_3:67902669-67902688 | Msa0136110:intron | 25.0% |
| ! | ACTGCAAAAAAAATTCTGAT+TGG | - | chr1_3:67902979-67902998 | Msa0136110:CDS | 25.0% |
| ! | CTGCAAAAAAAATTCTGATT+GGG | - | chr1_3:67902980-67902999 | Msa0136110:CDS | 25.0% |
| ! | AATAAAGTTATGACTGGTAT+TGG | - | chr1_3:67903007-67903026 | Msa0136110:CDS | 25.0% |
| !! | ACTGGTATTGGATTATTAAA+TGG | - | chr1_3:67903019-67903038 | Msa0136110:CDS | 25.0% |
| ! | ATAGTTACTAATCATAACTG+TGG | + | chr1_3:67903388-67903407 | None:intergenic | 25.0% |
| ! | TTTAATAGAAAGCTATACCT+GGG | + | chr1_3:67903827-67903846 | None:intergenic | 25.0% |
| !!! | TACAATTCGGTTTTATGTAA+AGG | - | chr1_3:67904149-67904168 | Msa0136110:intron | 25.0% |
| !! | TGTTTATATTTGAGACCATA+AGG | + | chr1_3:67904248-67904267 | None:intergenic | 25.0% |
| ! | TTATGTGTTTGGTATAAACT+TGG | + | chr1_3:67904291-67904310 | None:intergenic | 25.0% |
| ! | TCAAGGAAGATATTATTAAG+TGG | + | chr1_3:67904638-67904657 | None:intergenic | 25.0% |
| ! | TGTCAAATTCAAACAACTTA+TGG | + | chr1_3:67904684-67904703 | None:intergenic | 25.0% |
| ! | AATCCTATCAATTGTTTCAA+TGG | + | chr1_3:67904809-67904828 | None:intergenic | 25.0% |
| !! | CAGTAAAATAAAGTTGTTTC+TGG | - | chr1_3:67905110-67905129 | Msa0136110:CDS | 25.0% |
| !!! | TAAAATAAAGTTGTTTCTGG+AGG | - | chr1_3:67905113-67905132 | Msa0136110:CDS | 25.0% |
| TTTGTGTTATGTTGGAGATA+TGG | + | chr1_3:67901360-67901379 | None:intergenic | 30.0% | |
| !! | GCATGTTTTTGACTAGTAAT+TGG | + | chr1_3:67901444-67901463 | None:intergenic | 30.0% |
| !!! | AATGGAAAGTTGCTAGTTTT+AGG | + | chr1_3:67901483-67901502 | None:intergenic | 30.0% |
| TATGCTGTAAATTATGTTCG+TGG | - | chr1_3:67901921-67901940 | Msa0136110:CDS | 30.0% | |
| !! | CTGCTTATGATGTTGATAAT+TGG | - | chr1_3:67902018-67902037 | Msa0136110:CDS | 30.0% |
| TGGCAGCATATTAAATTTCA+TGG | + | chr1_3:67902100-67902119 | None:intergenic | 30.0% | |
| ! | TCCAATTGCTTATGCATTTT+TGG | + | chr1_3:67902120-67902139 | None:intergenic | 30.0% |
| TCTACATGGTGATATATGAT+TGG | + | chr1_3:67902205-67902224 | None:intergenic | 30.0% | |
| AATCTCCGTAAATATCTACA+TGG | + | chr1_3:67902219-67902238 | None:intergenic | 30.0% | |
| TGTCATGTGCTCATATAATA+GGG | - | chr1_3:67902320-67902339 | Msa0136110:intron | 30.0% | |
| ! | TTAAGTTAGCTTGACATGTA+AGG | + | chr1_3:67902457-67902476 | None:intergenic | 30.0% |
| CATAGCTATCATAGGTATAA+AGG | + | chr1_3:67902498-67902517 | None:intergenic | 30.0% | |
| CTATCTTAGTCCCTAAATAT+AGG | - | chr1_3:67902530-67902549 | Msa0136110:intron | 30.0% | |
| ACGCAGTTGAAAATTTGAAA+CGG | - | chr1_3:67902733-67902752 | Msa0136110:intron | 30.0% | |
| TGAAACGGTGTCTTATAAAA+AGG | - | chr1_3:67902748-67902767 | Msa0136110:intron | 30.0% | |
| GAAACGGTGTCTTATAAAAA+GGG | - | chr1_3:67902749-67902768 | Msa0136110:intron | 30.0% | |
| GTGTCTTATAAAAAGGGATA+AGG | - | chr1_3:67902755-67902774 | Msa0136110:intron | 30.0% | |
| GGAAGAAATAAAGTTATGAC+TGG | - | chr1_3:67903001-67903020 | Msa0136110:CDS | 30.0% | |
| CACTAAAGAAAATCAGCAAT+TGG | - | chr1_3:67903248-67903267 | Msa0136110:CDS | 30.0% | |
| ! | GTTTTGCTTGAAAACAACAA+AGG | - | chr1_3:67903297-67903316 | Msa0136110:CDS | 30.0% |
| ATAAAAACTTTGGCTGTGAT+TGG | - | chr1_3:67903345-67903364 | Msa0136110:CDS | 30.0% | |
| GTTATGATTAGTAACTATGC+TGG | - | chr1_3:67903390-67903409 | Msa0136110:CDS | 30.0% | |
| GACTAAAATCAATGTTCCTT+TGG | + | chr1_3:67903673-67903692 | None:intergenic | 30.0% | |
| ! | ACTAAAAGTGTAAGCAACAT+AGG | - | chr1_3:67903726-67903745 | Msa0136110:CDS | 30.0% |
| TCCAAATATTACTTGTGCTA+TGG | + | chr1_3:67903796-67903815 | None:intergenic | 30.0% | |
| GTTTAATAGAAAGCTATACC+TGG | + | chr1_3:67903828-67903847 | None:intergenic | 30.0% | |
| AAAAATCAAACGATGACGAA+TGG | + | chr1_3:67904008-67904027 | None:intergenic | 30.0% | |
| ! | CTCTAACATTCGATTTGATT+TGG | - | chr1_3:67904035-67904054 | Msa0136110:intron | 30.0% |
| TGGTTCGAAAAACTACAATT+CGG | - | chr1_3:67904136-67904155 | Msa0136110:intron | 30.0% | |
| !! | GGTTTTATGTAAAGGTAGTT+CGG | - | chr1_3:67904157-67904176 | Msa0136110:intron | 30.0% |
| TAATGTTACCACATACCTTA+TGG | - | chr1_3:67904230-67904249 | Msa0136110:CDS | 30.0% | |
| ! | TTATATTTGAGACTTGAGAC+CGG | - | chr1_3:67904324-67904343 | Msa0136110:CDS | 30.0% |
| ! | AATTTTCACTGTTAGTCCAA+AGG | + | chr1_3:67904372-67904391 | None:intergenic | 30.0% |
| ATTGTGGATACCATGTAAAT+GGG | + | chr1_3:67904415-67904434 | None:intergenic | 30.0% | |
| AGGGAAATTTCTACTGATAT+TGG | + | chr1_3:67904480-67904499 | None:intergenic | 30.0% | |
| AATATCAGTAGAAATTTCCC+TGG | - | chr1_3:67904479-67904498 | Msa0136110:intron | 30.0% | |
| ! | AGAACATACAGGTTTTACAA+TGG | - | chr1_3:67904503-67904522 | Msa0136110:intron | 30.0% |
| ! | GAACATACAGGTTTTACAAT+GGG | - | chr1_3:67904504-67904523 | Msa0136110:intron | 30.0% |
| TTCTGGATCATTATAGTAGA+AGG | + | chr1_3:67904596-67904615 | None:intergenic | 30.0% | |
| ! | TTGAAATGGATGTGTTTTTC+TGG | + | chr1_3:67904613-67904632 | None:intergenic | 30.0% |
| TATCAATTGCTTGATCATCA+AGG | + | chr1_3:67904655-67904674 | None:intergenic | 30.0% | |
| CAAATTCAAACAACTTATGG+TGG | + | chr1_3:67904681-67904700 | None:intergenic | 30.0% | |
| GTTCCATTGAAACAATTGAT+AGG | - | chr1_3:67904803-67904822 | Msa0136110:CDS | 30.0% | |
| ! | ATTTGAAAGAGCACAAGTTA+AGG | - | chr1_3:67904826-67904845 | Msa0136110:CDS | 30.0% |
| !! | CTAAGTAATGTTGATAGTGA+TGG | - | chr1_3:67904896-67904915 | Msa0136110:CDS | 30.0% |
| CACCACATTGATATTACAAT+TGG | - | chr1_3:67904986-67905005 | Msa0136110:CDS | 30.0% | |
| CTCCAATTGTAATATCAATG+TGG | + | chr1_3:67904991-67905010 | None:intergenic | 30.0% | |
| CATTGATATTACAATTGGAG+AGG | - | chr1_3:67904991-67905010 | Msa0136110:CDS | 30.0% | |
| ! | ATTACTATGTGGTAGTGTAA+GGG | - | chr1_3:67905155-67905174 | Msa0136110:CDS | 30.0% |
| CAAAAACATGCATGTGACAA+AGG | - | chr1_3:67901453-67901472 | Msa0136110:three_prime_UTR | 35.0% | |
| !! | GATAGTGAAGTGTTGCAAAA+TGG | + | chr1_3:67901501-67901520 | None:intergenic | 35.0% |
| AGCTATGTACAATGTGGATT+TGG | - | chr1_3:67901797-67901816 | Msa0136110:CDS | 35.0% | |
| !!! | ATTTGGCTGGTTTGACATTT+TGG | - | chr1_3:67901814-67901833 | Msa0136110:CDS | 35.0% |
| CGCGAAAAACATTCACATTA+GGG | + | chr1_3:67901842-67901861 | None:intergenic | 35.0% | |
| TCGCGAAAAACATTCACATT+AGG | + | chr1_3:67901843-67901862 | None:intergenic | 35.0% | |
| GCATATCTAGAAACAACCAA+AGG | + | chr1_3:67901906-67901925 | None:intergenic | 35.0% | |
| AAGCAAGTGCTAAAGATGAT+AGG | - | chr1_3:67901964-67901983 | Msa0136110:CDS | 35.0% | |
| TGCTAAAGATGATAGGCTTA+AGG | - | chr1_3:67901971-67901990 | Msa0136110:CDS | 35.0% | |
| !! | ATAATTGGAAAGGCGTTGAT+CGG | - | chr1_3:67902033-67902052 | Msa0136110:CDS | 35.0% |
| GCCAAAAATGCATAAGCAAT+TGG | - | chr1_3:67902116-67902135 | Msa0136110:CDS | 35.0% | |
| ! | ATATTTACGGAGATTTTCGC+AGG | - | chr1_3:67902224-67902243 | Msa0136110:intron | 35.0% |
| GTGTCATGTGCTCATATAAT+AGG | - | chr1_3:67902319-67902338 | Msa0136110:intron | 35.0% | |
| TGCTCATATAATAGGGTGAA+TGG | - | chr1_3:67902327-67902346 | Msa0136110:intron | 35.0% | |
| TATGGTCTCATATATCATGC+AGG | - | chr1_3:67903042-67903061 | Msa0136110:CDS | 35.0% | |
| GACTATGTAGTTGTATACCA+GGG | + | chr1_3:67903157-67903176 | None:intergenic | 35.0% | |
| TACATAGTCCTAATGAGACT+TGG | - | chr1_3:67903168-67903187 | Msa0136110:CDS | 35.0% | |
| TTGCAAATGGAAGTGACTTT+GGG | + | chr1_3:67903206-67903225 | None:intergenic | 35.0% | |
| TTTGCAAATGGAAGTGACTT+TGG | + | chr1_3:67903207-67903226 | None:intergenic | 35.0% | |
| TCTTTAGTGCATACATCAGA+TGG | + | chr1_3:67903237-67903256 | None:intergenic | 35.0% | |
| GTTACTAATCATAACTGTGG+TGG | + | chr1_3:67903385-67903404 | None:intergenic | 35.0% | |
| CTTGTAAAGGGCTTGAATAT+CGG | + | chr1_3:67903425-67903444 | None:intergenic | 35.0% | |
| ACTTCTGTAGTCCTTGTAAA+GGG | + | chr1_3:67903437-67903456 | None:intergenic | 35.0% | |
| TACTTCTGTAGTCCTTGTAA+AGG | + | chr1_3:67903438-67903457 | None:intergenic | 35.0% | |
| ACCAATCTATAGAAGCAGAA+GGG | - | chr1_3:67903580-67903599 | Msa0136110:intron | 35.0% | |
| !! | ATTTTAGTCATAATGGCAGC+AGG | - | chr1_3:67903684-67903703 | Msa0136110:CDS | 35.0% |
| ! | AAAAGTGTAAGCAACATAGG+AGG | - | chr1_3:67903729-67903748 | Msa0136110:CDS | 35.0% |
| AAAGTGTAAGCAACATAGGA+GGG | - | chr1_3:67903730-67903749 | Msa0136110:CDS | 35.0% | |
| CAACATAGGAGGGATATTAT+GGG | - | chr1_3:67903740-67903759 | Msa0136110:intron | 35.0% | |
| ATATTATGGGTAGGTTATCC+TGG | - | chr1_3:67903753-67903772 | Msa0136110:intron | 35.0% | |
| GCCATAGCACAAGTAATATT+TGG | - | chr1_3:67903792-67903811 | Msa0136110:intron | 35.0% | |
| ATATTTGGAGACTATAACCC+AGG | - | chr1_3:67903807-67903826 | Msa0136110:intron | 35.0% | |
| CGAACTTAACTAAACCAATC+CGG | - | chr1_3:67903959-67903978 | Msa0136110:intron | 35.0% | |
| CAAATTGAACCAAAGCAAAC+CGG | + | chr1_3:67903981-67904000 | None:intergenic | 35.0% | |
| ! | ATTTGAGACCATAAGGTATG+TGG | + | chr1_3:67904241-67904260 | None:intergenic | 35.0% |
| TTGTGGATACCATGTAAATG+GGG | + | chr1_3:67904414-67904433 | None:intergenic | 35.0% | |
| GATTGTGGATACCATGTAAA+TGG | + | chr1_3:67904416-67904435 | None:intergenic | 35.0% | |
| ACTTGATCGACATATGATTG+TGG | + | chr1_3:67904431-67904450 | None:intergenic | 35.0% | |
| AAAACCTGTATGTTCTTCCA+GGG | + | chr1_3:67904499-67904518 | None:intergenic | 35.0% | |
| TAAAACCTGTATGTTCTTCC+AGG | + | chr1_3:67904500-67904519 | None:intergenic | 35.0% | |
| TCCATAGCCAAATTCATAGA+GGG | + | chr1_3:67904534-67904553 | None:intergenic | 35.0% | |
| ATCCATAGCCAAATTCATAG+AGG | + | chr1_3:67904535-67904554 | None:intergenic | 35.0% | |
| ! | TTGACATTTTCGCTTGTGAT+TGG | - | chr1_3:67904698-67904717 | Msa0136110:CDS | 35.0% |
| ! | AAGAACAATGGACCTTTTGA+TGG | - | chr1_3:67904725-67904744 | Msa0136110:CDS | 35.0% |
| !! | TCATGTGGTGTTAGTGTTTT+TGG | - | chr1_3:67904751-67904770 | Msa0136110:CDS | 35.0% |
| ! | AAAGAGCACAAGTTAAGGTT+GGG | - | chr1_3:67904831-67904850 | Msa0136110:CDS | 35.0% |
| TAGTGATGGTAAACGAAAGT+TGG | - | chr1_3:67904910-67904929 | Msa0136110:CDS | 35.0% | |
| TACATGATAACAGTAGCTAG+TGG | + | chr1_3:67905089-67905108 | None:intergenic | 35.0% | |
| ATGGTGGTAACATTACTATG+TGG | - | chr1_3:67905144-67905163 | Msa0136110:CDS | 35.0% | |
| ! | CATTACTATGTGGTAGTGTA+AGG | - | chr1_3:67905154-67905173 | Msa0136110:CDS | 35.0% |
| ATCAGTTACAGCCTTACATA+GGG | + | chr1_3:67905181-67905200 | None:intergenic | 35.0% | |
| AATCAGTTACAGCCTTACAT+AGG | + | chr1_3:67905182-67905201 | None:intergenic | 35.0% | |
| ATCTTATGAAACCAGAGCCA+AGG | - | chr1_3:67901518-67901537 | Msa0136110:three_prime_UTR | 40.0% | |
| CAACTAGTAAACCCTTCTAC+CGG | - | chr1_3:67901579-67901598 | Msa0136110:exon | 40.0% | |
| ! | TTGGTGTTCCTGCTTATGAA+TGG | - | chr1_3:67901613-67901632 | Msa0136110:CDS | 40.0% |
| CTTCATGGTGTCTCAAATGT+AGG | - | chr1_3:67901648-67901667 | Msa0136110:CDS | 40.0% | |
| AGCTAGAGCTATGTACAATG+TGG | - | chr1_3:67901791-67901810 | Msa0136110:CDS | 40.0% | |
| ATGTACAATGTGGATTTGGC+TGG | - | chr1_3:67901801-67901820 | Msa0136110:CDS | 40.0% | |
| ! | TGAATGTTTTTCGCGATCCA+AGG | - | chr1_3:67901847-67901866 | Msa0136110:CDS | 40.0% |
| !! | TCGGTTCCATTTTGATGCTA+AGG | - | chr1_3:67902052-67902071 | Msa0136110:CDS | 40.0% |
| AACACACAGCTCTTAAATGG+AGG | + | chr1_3:67902282-67902301 | None:intergenic | 40.0% | |
| TCCATTTAAGAGCTGTGTGT+TGG | - | chr1_3:67902281-67902300 | Msa0136110:intron | 40.0% | |
| TCCAACACACAGCTCTTAAA+TGG | + | chr1_3:67902285-67902304 | None:intergenic | 40.0% | |
| ATTTAAGAGCTGTGTGTTGG+AGG | - | chr1_3:67902284-67902303 | Msa0136110:intron | 40.0% | |
| TTTAAGAGCTGTGTGTTGGA+GGG | - | chr1_3:67902285-67902304 | Msa0136110:intron | 40.0% | |
| TGTTTCAGACTGTGATTCAG+TGG | - | chr1_3:67902862-67902881 | Msa0136110:CDS | 40.0% | |
| GCAGGTTTAAACATGAACTG+CGG | - | chr1_3:67903060-67903079 | Msa0136110:CDS | 40.0% | |
| GGACTATGTAGTTGTATACC+AGG | + | chr1_3:67903158-67903177 | None:intergenic | 40.0% | |
| CAAAGAAGCCAAGTCTCATT+AGG | + | chr1_3:67903179-67903198 | None:intergenic | 40.0% | |
| TCACTTCCATTTGCAAACCT+TGG | - | chr1_3:67903210-67903229 | Msa0136110:CDS | 40.0% | |
| CGATATTCAAGCCCTTTACA+AGG | - | chr1_3:67903423-67903442 | Msa0136110:CDS | 40.0% | |
| ! | TCTTTTTGCAGCAGCAGTTA+AGG | - | chr1_3:67903515-67903534 | Msa0136110:CDS | 40.0% |
| GACCAATCTATAGAAGCAGA+AGG | - | chr1_3:67903579-67903598 | Msa0136110:intron | 40.0% | |
| ! | AGAGTTAACTTGACATTGCC+TGG | - | chr1_3:67903609-67903628 | Msa0136110:intron | 40.0% |
| ACAAGCTTCTCTTGAAATCC+AGG | + | chr1_3:67903630-67903649 | None:intergenic | 40.0% | |
| AGAGAAGCTTGTGAAAGATG+TGG | - | chr1_3:67903638-67903657 | Msa0136110:intron | 40.0% | |
| GCAACATAGGAGGGATATTA+TGG | - | chr1_3:67903739-67903758 | Msa0136110:intron | 40.0% | |
| ATAGGAGGGATATTATGGGT+AGG | - | chr1_3:67903744-67903763 | Msa0136110:intron | 40.0% | |
| ! | TAAACCAATCCGGTTTGCTT+TGG | - | chr1_3:67903969-67903988 | Msa0136110:intron | 40.0% |
| TATGTTTGCACTGCATCCTT+TGG | - | chr1_3:67904353-67904372 | Msa0136110:intron | 40.0% | |
| CTCATGTTCATGTCTGTCAT+TGG | + | chr1_3:67904455-67904474 | None:intergenic | 40.0% | |
| ATTTCCCTGGAAGAACATAC+AGG | - | chr1_3:67904492-67904511 | Msa0136110:intron | 40.0% | |
| GGGAAATCCCTCTATGAATT+TGG | - | chr1_3:67904524-67904543 | Msa0136110:intron | 40.0% | |
| TCCCTCTATGAATTTGGCTA+TGG | - | chr1_3:67904530-67904549 | Msa0136110:intron | 40.0% | |
| GTGATTGGTGTGAAGAACAA+TGG | - | chr1_3:67904713-67904732 | Msa0136110:CDS | 40.0% | |
| !! | ACCTTTTGATGGATCTCATG+TGG | - | chr1_3:67904736-67904755 | Msa0136110:CDS | 40.0% |
| ACCACATGAGATCCATCAAA+AGG | + | chr1_3:67904740-67904759 | None:intergenic | 40.0% | |
| ! | GAAAGAGCACAAGTTAAGGT+TGG | - | chr1_3:67904830-67904849 | Msa0136110:CDS | 40.0% |
| !! | GGTAAACGAAAGTTGGTGAT+TGG | - | chr1_3:67904917-67904936 | Msa0136110:CDS | 40.0% |
| TAAGCGTGACACTAAGTCCT+TGG | + | chr1_3:67901538-67901557 | None:intergenic | 45.0% | |
| AACACCAAGCCTTGAAATGC+CGG | + | chr1_3:67901601-67901620 | None:intergenic | 45.0% | |
| GTGTTCCTGCTTATGAATGG+TGG | - | chr1_3:67901616-67901635 | Msa0136110:CDS | 45.0% | |
| TCTGACCACCATTCATAAGC+AGG | + | chr1_3:67901624-67901643 | None:intergenic | 45.0% | |
| TGCTTATGAATGGTGGTCAG+AGG | - | chr1_3:67901623-67901642 | Msa0136110:CDS | 45.0% | |
| GTGTCTCAAATGTAGGACCA+GGG | - | chr1_3:67901655-67901674 | Msa0136110:CDS | 45.0% | |
| ! | ATGTTTTTCGCGATCCAAGG+TGG | - | chr1_3:67901850-67901869 | Msa0136110:CDS | 45.0% |
| ! | TGTTTTTCGCGATCCAAGGT+GGG | - | chr1_3:67901851-67901870 | Msa0136110:CDS | 45.0% |
| ! | GTTCGTGGACTACAAGAAGT+TGG | - | chr1_3:67901936-67901955 | Msa0136110:CDS | 45.0% |
| ATTACACCTTGGAGAAGGTC+TGG | + | chr1_3:67902372-67902391 | None:intergenic | 45.0% | |
| CTCTGATTACACCTTGGAGA+AGG | + | chr1_3:67902377-67902396 | None:intergenic | 45.0% | |
| CTTCTCCAAGGTGTAATCAG+AGG | - | chr1_3:67902375-67902394 | Msa0136110:intron | 45.0% | |
| AAAGACTCCTGAAGATGCAG+TGG | - | chr1_3:67902913-67902932 | Msa0136110:CDS | 45.0% | |
| ATCTATTGTAGACCAAGCCC+TGG | - | chr1_3:67903137-67903156 | Msa0136110:CDS | 45.0% | |
| TGTAGTTGTATACCAGGGCT+TGG | + | chr1_3:67903152-67903171 | None:intergenic | 45.0% | |
| GATGGTCCAAGGTTTGCAAA+TGG | + | chr1_3:67903219-67903238 | None:intergenic | 45.0% | |
| TGCATACATCAGATGGTCCA+AGG | + | chr1_3:67903230-67903249 | None:intergenic | 45.0% | |
| ACTGTGGTGGCATTTGCATT+TGG | + | chr1_3:67903372-67903391 | None:intergenic | 45.0% | |
| AAAGGGCTTGAATATCGGCA+TGG | + | chr1_3:67903420-67903439 | None:intergenic | 45.0% | |
| TCTTCAGTAACTTACGCGCA+TGG | - | chr1_3:67903462-67903481 | Msa0136110:CDS | 45.0% | |
| ! | TTTTGCAGCAGCAGTTAAGG+CGG | - | chr1_3:67903518-67903537 | Msa0136110:CDS | 45.0% |
| !! | GATACAGTGGTGTTGGTTGT+TGG | - | chr1_3:67903552-67903571 | Msa0136110:intron | 45.0% |
| !! | AGTGGTGTTGGTTGTTGGAT+TGG | - | chr1_3:67903557-67903576 | Msa0136110:intron | 45.0% |
| GCCCTTCTGCTTCTATAGAT+TGG | + | chr1_3:67903584-67903603 | None:intergenic | 45.0% | |
| ATCTATAGAAGCAGAAGGGC+TGG | - | chr1_3:67903584-67903603 | Msa0136110:intron | 45.0% | |
| GTAGGTTATCCTGGTCAAGA+TGG | - | chr1_3:67903762-67903781 | Msa0136110:intron | 45.0% | |
| TGAACCAAAGCAAACCGGAT+TGG | + | chr1_3:67903976-67903995 | None:intergenic | 45.0% | |
| ! | AACGAACCTTCATACCGGTT+CGG | - | chr1_3:67904196-67904215 | Msa0136110:intron | 45.0% |
| ! | TATTTGAGACTTGAGACCGG+AGG | - | chr1_3:67904327-67904346 | Msa0136110:CDS | 45.0% |
| CAGTGCAAACATAACTCCTC+CGG | + | chr1_3:67904346-67904365 | None:intergenic | 45.0% | |
| TGCTATGTGGGTAGAGAATG+TGG | + | chr1_3:67904567-67904586 | None:intergenic | 45.0% | |
| AGAAGGAGCAGATGCTATGT+GGG | + | chr1_3:67904579-67904598 | None:intergenic | 45.0% | |
| TAGAAGGAGCAGATGCTATG+TGG | + | chr1_3:67904580-67904599 | None:intergenic | 45.0% | |
| GATTGGACAGCACACTATTC+TGG | - | chr1_3:67904934-67904953 | Msa0136110:CDS | 45.0% | |
| TAGTGTAAGGGCCCTATGTA+AGG | - | chr1_3:67905167-67905186 | Msa0136110:CDS | 45.0% | |
| TGACACTAAGTCCTTGGCTC+TGG | + | chr1_3:67901532-67901551 | None:intergenic | 50.0% | |
| ACCCTTCTACCGGCATTTCA+AGG | - | chr1_3:67901589-67901608 | Msa0136110:CDS | 50.0% | |
| GCCTTGAAATGCCGGTAGAA+GGG | + | chr1_3:67901593-67901612 | None:intergenic | 50.0% | |
| AGCCTTGAAATGCCGGTAGA+AGG | + | chr1_3:67901594-67901613 | None:intergenic | 50.0% | |
| TCTACCGGCATTTCAAGGCT+TGG | - | chr1_3:67901594-67901613 | Msa0136110:CDS | 50.0% | |
| GGTGTCTCAAATGTAGGACC+AGG | - | chr1_3:67901654-67901673 | Msa0136110:CDS | 50.0% | |
| GCAGCTGATAGTATCACTGC+TGG | + | chr1_3:67901720-67901739 | None:intergenic | 50.0% | |
| ! | GTTTTTCGCGATCCAAGGTG+GGG | - | chr1_3:67901852-67901871 | Msa0136110:CDS | 50.0% |
| ! | TTTTTCGCGATCCAAGGTGG+GGG | - | chr1_3:67901853-67901872 | Msa0136110:CDS | 50.0% |
| AACTCCAGGGGAAGATCCTT+TGG | - | chr1_3:67901887-67901906 | Msa0136110:CDS | 50.0% | |
| ACAACCAAAGGATCTTCCCC+TGG | + | chr1_3:67901894-67901913 | None:intergenic | 50.0% | |
| GCAGGTGACAAAGCAAGACT+TGG | - | chr1_3:67902242-67902261 | Msa0136110:intron | 50.0% | |
| GGTGACAAAGCAAGACTTGG+AGG | - | chr1_3:67902245-67902264 | Msa0136110:intron | 50.0% | |
| AGGTCTGGATCAGCACATGT+AGG | + | chr1_3:67902357-67902376 | None:intergenic | 50.0% | |
| ! | ACTGGCCTCTGATTACACCT+TGG | + | chr1_3:67902383-67902402 | None:intergenic | 50.0% |
| AAGGTGTAATCAGAGGCCAG+TGG | - | chr1_3:67902382-67902401 | Msa0136110:intron | 50.0% | |
| AGGTGTAATCAGAGGCCAGT+GGG | - | chr1_3:67902383-67902402 | Msa0136110:intron | 50.0% | |
| CAACACCACTGTATCAGCAG+AGG | + | chr1_3:67903547-67903566 | None:intergenic | 50.0% | |
| CTCTGCTGATACAGTGGTGT+TGG | - | chr1_3:67903545-67903564 | Msa0136110:intron | 50.0% | |
| GGTTATCCTGGTCAAGATGG+AGG | - | chr1_3:67903765-67903784 | Msa0136110:intron | 50.0% | |
| GCATTTCCTCCATCTTGACC+AGG | + | chr1_3:67903774-67903793 | None:intergenic | 50.0% | |
| GTAGTTCGGAACCACAGAAC+CGG | - | chr1_3:67904171-67904190 | Msa0136110:intron | 50.0% | |
| CGGTATGAAGGTTCGTTCAC+CGG | + | chr1_3:67904193-67904212 | None:intergenic | 50.0% | |
| CGGTGAACGAACCTTCATAC+CGG | - | chr1_3:67904191-67904210 | Msa0136110:intron | 50.0% | |
| !! | ACGAACCTTCATACCGGTTC+GGG | - | chr1_3:67904197-67904216 | Msa0136110:CDS | 50.0% |
| TTATTACCGTCGTCCCGAAC+CGG | + | chr1_3:67904213-67904232 | None:intergenic | 50.0% | |
| GTGGTAGGTCCCCATTTACA+TGG | - | chr1_3:67904402-67904421 | Msa0136110:intron | 50.0% | |
| CTCACCACTTCTGAACTTGG+TGG | + | chr1_3:67904779-67904798 | None:intergenic | 50.0% | |
| CCACTCACCACTTCTGAACT+TGG | + | chr1_3:67904782-67904801 | None:intergenic | 50.0% | |
| CCAAGTTCAGAAGTGGTGAG+TGG | - | chr1_3:67904779-67904798 | Msa0136110:CDS | 50.0% | |
| GGACAGCACACTATTCTGGT+TGG | - | chr1_3:67904938-67904957 | Msa0136110:CDS | 50.0% | |
| ! | GTTTCTGGAGGTGATGAGCA+TGG | - | chr1_3:67905125-67905144 | Msa0136110:CDS | 50.0% |
| !! | TGGTGGTCAGAGGCACTTCA+TGG | - | chr1_3:67901633-67901652 | Msa0136110:CDS | 55.0% |
| AGGGACGCGTTTCGATAGCA+GGG | - | chr1_3:67901674-67901693 | Msa0136110:CDS | 55.0% | |
| ! | CGTTTCGATAGCAGGGTACC+TGG | - | chr1_3:67901681-67901700 | Msa0136110:CDS | 55.0% |
| GCTGGAAAGCTAGTAGCACC+AGG | + | chr1_3:67901702-67901721 | None:intergenic | 55.0% | |
| GGCGTGGACAAGAAACTCCA+GGG | - | chr1_3:67901874-67901893 | Msa0136110:CDS | 55.0% | |
| GCGTGGACAAGAAACTCCAG+GGG | - | chr1_3:67901875-67901894 | Msa0136110:CDS | 55.0% | |
| GCTGATCCAGACCTTCTCCA+AGG | - | chr1_3:67902363-67902382 | Msa0136110:intron | 55.0% | |
| GGTGTAATCAGAGGCCAGTG+GGG | - | chr1_3:67902384-67902403 | Msa0136110:intron | 55.0% | |
| CAAACCCATCTAGACCCCAC+TGG | + | chr1_3:67902401-67902420 | None:intergenic | 55.0% | |
| GCAAGAGCCACTGCATCTTC+AGG | + | chr1_3:67902923-67902942 | None:intergenic | 55.0% | |
| GTGGCTCTTGCACTGAAAGC+AGG | - | chr1_3:67902932-67902951 | Msa0136110:CDS | 55.0% | |
| !! | GCTCTAGAAGCTGCGAAGCA+AGG | - | chr1_3:67903270-67903289 | Msa0136110:CDS | 55.0% |
| GATGTGGCTGCTGCTACCAA+AGG | - | chr1_3:67903654-67903673 | Msa0136110:intron | 55.0% | |
| !! | AGGTTCGTTCACCGGTTCTG+TGG | + | chr1_3:67904185-67904204 | None:intergenic | 55.0% |
| !! | TTCATACCGGTTCGGGACGA+CGG | - | chr1_3:67904204-67904223 | Msa0136110:CDS | 55.0% |
| GGAGCCACCAAGTTCAGAAG+TGG | - | chr1_3:67904772-67904791 | Msa0136110:CDS | 55.0% | |
| TCTGGAGGTGATGAGCATGG+TGG | - | chr1_3:67905128-67905147 | Msa0136110:CDS | 55.0% | |
| CTGCTATCGAAACGCGTCCC+TGG | + | chr1_3:67901675-67901694 | None:intergenic | 60.0% | |
| CAGGGACGCGTTTCGATAGC+AGG | - | chr1_3:67901673-67901692 | Msa0136110:CDS | 60.0% | |
| GGGCGTGGACAAGAAACTCC+AGG | - | chr1_3:67901873-67901892 | Msa0136110:CDS | 60.0% | |
| AGAGGCCAGTGGGGTCTAGA+TGG | - | chr1_3:67902393-67902412 | Msa0136110:intron | 60.0% | |
| GAGGCCAGTGGGGTCTAGAT+GGG | - | chr1_3:67902394-67902413 | Msa0136110:intron | 60.0% | |
| GGCAGCCTCTGCTGATACAG+TGG | - | chr1_3:67903539-67903558 | Msa0136110:intron | 60.0% | |
| GTCGTCCCGAACCGGTATGA+AGG | + | chr1_3:67904205-67904224 | None:intergenic | 60.0% | |
| TCTTGTCCACGCCCCCACCT+TGG | + | chr1_3:67901867-67901886 | None:intergenic | 65.0% | |
| CGCGATCCAAGGTGGGGGCG+TGG | - | chr1_3:67901858-67901877 | Msa0136110:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 67901354 | 67905258 | 67901354 | ID=Msa0136110;Name=Msa0136110 |
| chr1_3 | mRNA | 67901354 | 67905258 | 67901354 | ID=Msa0136110-mRNA-1;Parent=Msa0136110;Name=Msa0136110-mRNA-1;_AED=0.01;_eAED=0.01;_QI=36|1|1|1|1|1|5|228|781 |
| chr1_3 | exon | 67901354 | 67902210 | 67901354 | ID=Msa0136110-mRNA-1:exon:23413;Parent=Msa0136110-mRNA-1 |
| chr1_3 | exon | 67902784 | 67903548 | 67902784 | ID=Msa0136110-mRNA-1:exon:23412;Parent=Msa0136110-mRNA-1 |
| chr1_3 | exon | 67903659 | 67903756 | 67903659 | ID=Msa0136110-mRNA-1:exon:23411;Parent=Msa0136110-mRNA-1 |
| chr1_3 | exon | 67904197 | 67904366 | 67904197 | ID=Msa0136110-mRNA-1:exon:23410;Parent=Msa0136110-mRNA-1 |
| chr1_3 | exon | 67904539 | 67905258 | 67904539 | ID=Msa0136110-mRNA-1:exon:23409;Parent=Msa0136110-mRNA-1 |
| chr1_3 | five_prime_UTR | 67905223 | 67905258 | 67905223 | ID=Msa0136110-mRNA-1:five_prime_utr;Parent=Msa0136110-mRNA-1 |
| chr1_3 | CDS | 67904539 | 67905222 | 67904539 | ID=Msa0136110-mRNA-1:cds;Parent=Msa0136110-mRNA-1 |
| chr1_3 | CDS | 67904197 | 67904366 | 67904197 | ID=Msa0136110-mRNA-1:cds;Parent=Msa0136110-mRNA-1 |
| chr1_3 | CDS | 67903659 | 67903756 | 67903659 | ID=Msa0136110-mRNA-1:cds;Parent=Msa0136110-mRNA-1 |
| chr1_3 | CDS | 67902784 | 67903548 | 67902784 | ID=Msa0136110-mRNA-1:cds;Parent=Msa0136110-mRNA-1 |
| chr1_3 | CDS | 67901582 | 67902210 | 67901582 | ID=Msa0136110-mRNA-1:cds;Parent=Msa0136110-mRNA-1 |
| chr1_3 | three_prime_UTR | 67901354 | 67901581 | 67901354 | ID=Msa0136110-mRNA-1:three_prime_utr;Parent=Msa0136110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
