Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160240 | XP_003588476.2 | 99.027 | 411 | 4 | 0 | 1 | 411 | 89 | 499 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160240 | G7I3E2 | 99.027 | 411 | 4 | 0 | 1 | 411 | 89 | 499 | 0.0 | 820 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008650 | Msa0160240 | 0.845320 | 4.371673e-59 | -8.615850e-47 |
| Msa0047540 | Msa0160240 | 0.802682 | 4.996077e-49 | -8.615850e-47 |
| Msa0062160 | Msa0160240 | 0.800487 | 1.408517e-48 | -8.615850e-47 |
| Msa0080100 | Msa0160240 | -0.805019 | 1.633905e-49 | -8.615850e-47 |
| Msa0160200 | Msa0160240 | 0.931804 | 2.194651e-94 | -8.615850e-47 |
| Msa0160240 | Msa0369580 | -0.800032 | 1.742965e-48 | -8.615850e-47 |
| Msa0160240 | Msa0417000 | -0.821134 | 4.743854e-53 | -8.615850e-47 |
| Msa0160240 | Msa0712920 | 0.800614 | 1.326882e-48 | -8.615850e-47 |
| Msa0160240 | Msa1129860 | 0.804777 | 1.835846e-49 | -8.615850e-47 |
| Msa0160240 | Msa1405040 | -0.813609 | 2.346856e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160240 | MtrunA17_Chr1g0146691 | 99.027 | 411 | 4 | 0 | 1 | 411 | 89 | 499 | 0.0 | 820 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0160240 | AT5G05310.2 | 61.858 | 409 | 141 | 3 | 1 | 403 | 90 | 489 | 1.48e-173 | 494 |
| Msa0160240 | AT5G05310.7 | 61.951 | 410 | 139 | 4 | 1 | 403 | 90 | 489 | 3.04e-173 | 494 |
| Msa0160240 | AT5G05310.3 | 61.707 | 410 | 140 | 4 | 1 | 403 | 90 | 489 | 5.53e-172 | 491 |
| Msa0160240 | AT5G05310.9 | 64.116 | 379 | 122 | 4 | 36 | 403 | 5 | 380 | 2.95e-166 | 472 |
| Msa0160240 | AT5G05310.5 | 60.925 | 389 | 137 | 3 | 1 | 383 | 90 | 469 | 3.14e-159 | 457 |
| Msa0160240 | AT5G05310.1 | 60.668 | 389 | 138 | 3 | 1 | 383 | 90 | 469 | 2.96e-158 | 454 |
| Msa0160240 | AT5G05310.4 | 63.231 | 359 | 118 | 4 | 36 | 383 | 5 | 360 | 4.71e-152 | 434 |
| Msa0160240 | AT5G05310.8 | 55.990 | 409 | 126 | 4 | 1 | 403 | 90 | 450 | 3.98e-147 | 426 |
| Msa0160240 | AT5G05310.6 | 57.194 | 278 | 104 | 3 | 1 | 272 | 90 | 358 | 3.62e-97 | 296 |
Find 104 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATCAACTGCTGCCCTTTA+TGG | 0.078663 | 1_4:+32298259 | Msa0160240:CDS |
| AAGGGATGCTTGAAAGAATT+TGG | 0.120920 | 1_4:-32298757 | None:intergenic |
| CAGTCAGGTTCAAGATTATT+TGG | 0.124112 | 1_4:+32293284 | Msa0160240:intron |
| TCCGTATAGGATTGTTTCTT+TGG | 0.190623 | 1_4:+32292993 | Msa0160240:CDS |
| GGGCGCATTCTTACTGTTGC+TGG | 0.213977 | 1_4:+32296081 | Msa0160240:CDS |
| CTCTTCATTCTTCTATTTCC+AGG | 0.225663 | 1_4:+32294545 | Msa0160240:CDS |
| TCAAGATTATTTGGGTTTAT+TGG | 0.226892 | 1_4:+32293293 | Msa0160240:CDS |
| CAGTTGATGGGCTTCCGTTT+TGG | 0.259434 | 1_4:-32298246 | None:intergenic |
| TTTGTTTGCTGCTTTGTTGA+TGG | 0.265472 | 1_4:+32293468 | Msa0160240:CDS |
| TCATAGTGTTCTTTATTCTA+TGG | 0.281562 | 1_4:+32292724 | Msa0160240:CDS |
| TGCATATATCATTGTTCATC+TGG | 0.287046 | 1_4:+32294508 | Msa0160240:CDS |
| CTCTAGCTGTTTGGCCAGAT+TGG | 0.290929 | 1_4:+32296157 | Msa0160240:CDS |
| TCACTAAAGCGGATGACTTT+GGG | 0.296466 | 1_4:-32294425 | None:intergenic |
| CCTCCAATTACCCGCTTAGA+AGG | 0.299626 | 1_4:-32298776 | None:intergenic |
| AGGACTGAACACACTCTAAA+AGG | 0.313410 | 1_4:+32294399 | Msa0160240:CDS |
| ATCCCTTCTAAGCGGGTAAT+TGG | 0.314937 | 1_4:+32298773 | Msa0160240:three_prime_UTR |
| GTACAGTAAGTGAACTATAA+TGG | 0.326681 | 1_4:+32298644 | Msa0160240:exon |
| GCATAATGTTTGGCCCATAT+TGG | 0.327547 | 1_4:+32294449 | Msa0160240:CDS |
| AAGCCAGAGTCCTTCCAATA+TGG | 0.328705 | 1_4:-32294463 | None:intergenic |
| CGCATACCGGAAGGCCATAA+AGG | 0.339702 | 1_4:-32298273 | None:intergenic |
| AGGGATGCTTGAAAGAATTT+GGG | 0.347990 | 1_4:-32298756 | None:intergenic |
| TAATAACATAAATTGATATA+TGG | 0.352892 | 1_4:+32298824 | Msa0160240:three_prime_UTR |
| GGCGCATTCTTACTGTTGCT+GGG | 0.355123 | 1_4:+32296082 | Msa0160240:CDS |
| TTATTGTCTTACGATCAAAT+TGG | 0.361396 | 1_4:-32292775 | None:intergenic |
| TGCTGCCCTTTATGGCCTTC+CGG | 0.372438 | 1_4:+32298267 | Msa0160240:CDS |
| CTATGGCACTATTCATCATC+TGG | 0.381282 | 1_4:+32292741 | Msa0160240:CDS |
| CTTGGAGATGCTGCAGCAGC+TGG | 0.386009 | 1_4:+32298199 | Msa0160240:CDS |
| CCGTATAGGATTGTTTCTTT+GGG | 0.388493 | 1_4:+32292994 | Msa0160240:CDS |
| TACAGTAAGTGAACTATAAT+GGG | 0.391461 | 1_4:+32298645 | Msa0160240:exon |
| AAGAGGAACTGTCTCCCATT+AGG | 0.391486 | 1_4:+32293542 | Msa0160240:CDS |
| TATTGGACAACTAACCTTAA+CGG | 0.392572 | 1_4:+32295254 | Msa0160240:CDS |
| AGTCAGGTTCAAGATTATTT+GGG | 0.394883 | 1_4:+32293285 | Msa0160240:intron |
| CCATAAAGGGCAGCAGTTGA+TGG | 0.395489 | 1_4:-32298259 | None:intergenic |
| ACAAATAGAAGTTCTCTTCC+AGG | 0.396229 | 1_4:-32297593 | None:intergenic |
| TTCACTAAAGCGGATGACTT+TGG | 0.397463 | 1_4:-32294426 | None:intergenic |
| CCCAAAGAAACAATCCTATA+CGG | 0.404528 | 1_4:-32292994 | None:intergenic |
| ATTTAGCAGCTCTAGCTGTT+TGG | 0.406828 | 1_4:+32296148 | Msa0160240:CDS |
| GCCACCCTTGGACAACTTTG+TGG | 0.408789 | 1_4:+32293323 | Msa0160240:CDS |
| TAATTACACTTTCTTCAACT+TGG | 0.416019 | 1_4:+32293161 | Msa0160240:CDS |
| GTCTTGCATCATCAGTTAGT+TGG | 0.417522 | 1_4:+32292942 | Msa0160240:CDS |
| CTTTAGTGAAGCATAATGTT+TGG | 0.419464 | 1_4:+32294439 | Msa0160240:CDS |
| AATTACACTTTCTTCAACTT+GGG | 0.424688 | 1_4:+32293162 | Msa0160240:CDS |
| ACCTCGAAAGATGCGAAACT+TGG | 0.444622 | 1_4:+32292908 | Msa0160240:CDS |
| GGAATGTATAAAATGCTATT+CGG | 0.449545 | 1_4:+32298220 | Msa0160240:CDS |
| ATTGGCGCCGGTGCCACCCT+TGG | 0.450925 | 1_4:+32293311 | Msa0160240:CDS |
| GAATAAAGGAATAACCTAAT+GGG | 0.452607 | 1_4:-32293556 | None:intergenic |
| AGCACAGTTACTAGCTCTCT+TGG | 0.453833 | 1_4:+32295180 | Msa0160240:CDS |
| TCTTGCATCATCAGTTAGTT+GGG | 0.458816 | 1_4:+32292943 | Msa0160240:CDS |
| GATGCGAAACTTGGTGATCA+AGG | 0.462636 | 1_4:+32292917 | Msa0160240:CDS |
| AGCCAGAGTCCTTCCAATAT+GGG | 0.465635 | 1_4:-32294462 | None:intergenic |
| ACCAAGTTTCGCATCTTTCG+AGG | 0.468234 | 1_4:-32292909 | None:intergenic |
| GGCCCATATTGGAAGGACTC+TGG | 0.472781 | 1_4:+32294460 | Msa0160240:CDS |
| AGCTGTTTGGCCAGATTGGA+TGG | 0.486134 | 1_4:+32296161 | Msa0160240:CDS |
| TATACCAGGTTTGTTTGCTG+TGG | 0.489345 | 1_4:+32298555 | Msa0160240:intron |
| ACATATGTCGTTACAAGGCC+TGG | 0.492097 | 1_4:+32297575 | Msa0160240:CDS |
| CACTTTCTTCAACTTGGGCA+AGG | 0.496172 | 1_4:+32293167 | Msa0160240:CDS |
| CATAAATTGATATATGGTGC+TGG | 0.496750 | 1_4:+32298830 | Msa0160240:three_prime_UTR |
| ATGCTATTCGGTACCCAAAA+CGG | 0.497652 | 1_4:+32298232 | Msa0160240:CDS |
| ATGAGGCTAGTGAGATTGAC+AGG | 0.498584 | 1_4:+32294379 | Msa0160240:CDS |
| ATAGCCACCACCATCCAATC+TGG | 0.501086 | 1_4:-32296171 | None:intergenic |
| TCTATTTGTTGTTGTTTCAG+AGG | 0.501374 | 1_4:+32297607 | Msa0160240:CDS |
| GCATACCGGAAGGCCATAAA+GGG | 0.503514 | 1_4:-32298272 | None:intergenic |
| TGTGGATCACTGTTTGCCAC+TGG | 0.503643 | 1_4:+32293341 | Msa0160240:CDS |
| CATAAAGGGCAGCAGTTGAT+GGG | 0.504756 | 1_4:-32298258 | None:intergenic |
| CCTTCTAAGCGGGTAATTGG+AGG | 0.505143 | 1_4:+32298776 | Msa0160240:three_prime_UTR |
| GGCAAGGGTAATTGACGTAA+TGG | 0.511302 | 1_4:+32293183 | Msa0160240:CDS |
| TGCTTTGTTGATGGAACTTG+CGG | 0.514337 | 1_4:+32293477 | Msa0160240:CDS |
| TTCAAGCATCCCTTCTAAGC+GGG | 0.515807 | 1_4:+32298766 | Msa0160240:three_prime_UTR |
| AAGTTGTCCAAGGGTGGCAC+CGG | 0.518873 | 1_4:-32293318 | None:intergenic |
| ATCACTGTTTGCCACTGGAA+TGG | 0.526777 | 1_4:+32293346 | Msa0160240:CDS |
| AAATTTAAGAAGCCAACAAA+AGG | 0.535746 | 1_4:-32296129 | None:intergenic |
| CAGGCAAGCTCAACTTTCAA+AGG | 0.538613 | 1_4:+32298604 | Msa0160240:CDS |
| GATGTGCTGGTTCAAAGACT+TGG | 0.538899 | 1_4:+32298181 | Msa0160240:CDS |
| TTATTTGGGTTTATTGGCGC+CGG | 0.542986 | 1_4:+32293299 | Msa0160240:CDS |
| AACATTATGCTTCACTAAAG+CGG | 0.545555 | 1_4:-32294436 | None:intergenic |
| TGATTCCAACCCTGAAAATG+AGG | 0.548025 | 1_4:+32294362 | Msa0160240:CDS |
| CTCCAATTACCCGCTTAGAA+GGG | 0.553470 | 1_4:-32298775 | None:intergenic |
| CGATACATCTCATGTTGAAG+AGG | 0.554678 | 1_4:+32293525 | Msa0160240:CDS |
| AATGTTTGGCCCATATTGGA+AGG | 0.555421 | 1_4:+32294453 | Msa0160240:CDS |
| CACTAAAGCGGATGACTTTG+GGG | 0.556815 | 1_4:-32294424 | None:intergenic |
| CAGAGATATAAAACCATCCA+TGG | 0.557084 | 1_4:-32292970 | None:intergenic |
| TTGGCCAGATTGGATGGTGG+TGG | 0.558352 | 1_4:+32296167 | Msa0160240:CDS |
| TTGTTACATATGTCGTTACA+AGG | 0.561769 | 1_4:+32297570 | Msa0160240:CDS |
| ACTTTCTTCAACTTGGGCAA+GGG | 0.563550 | 1_4:+32293168 | Msa0160240:CDS |
| GCAGATATGCATAGATGTGC+TGG | 0.569585 | 1_4:+32298168 | Msa0160240:intron |
| GTGATCCACAAAGTTGTCCA+AGG | 0.583511 | 1_4:-32293328 | None:intergenic |
| AAGAGAGCTAGTAACTGTGC+TGG | 0.585958 | 1_4:-32295178 | None:intergenic |
| TTAGTTGGGATAACCATGGA+TGG | 0.588899 | 1_4:+32292957 | Msa0160240:CDS |
| TATTTGTGAGACACTGAGAA+AGG | 0.600732 | 1_4:+32296191 | Msa0160240:CDS |
| CTTGCGGCTCAGACATCAAG+AGG | 0.600948 | 1_4:+32293493 | Msa0160240:CDS |
| AGTGAACTATAATGGGTGAT+CGG | 0.607885 | 1_4:+32298652 | Msa0160240:exon |
| TTCTGAGATAAAAGCTAACA+CGG | 0.609978 | 1_4:+32298725 | Msa0160240:three_prime_UTR |
| GCGCATTCTTACTGTTGCTG+GGG | 0.617741 | 1_4:+32296083 | Msa0160240:CDS |
| ATCTTTCGAGGTCAAAGCAG+TGG | 0.623754 | 1_4:-32292897 | None:intergenic |
| TGAACAATGATATATGCAAG+AGG | 0.623962 | 1_4:-32294503 | None:intergenic |
| TCCACAAAGTTGTCCAAGGG+TGG | 0.638478 | 1_4:-32293324 | None:intergenic |
| TTGAAAGTTGAGCTTGCCTG+CGG | 0.645029 | 1_4:-32298601 | None:intergenic |
| TGATCCACAAAGTTGTCCAA+GGG | 0.658076 | 1_4:-32293327 | None:intergenic |
| TCAGTTAGTTGGGATAACCA+TGG | 0.671089 | 1_4:+32292953 | Msa0160240:CDS |
| TTTCAAGCATCCCTTCTAAG+CGG | 0.695213 | 1_4:+32298765 | Msa0160240:three_prime_UTR |
| TGTTTGGCCAGATTGGATGG+TGG | 0.699492 | 1_4:+32296164 | Msa0160240:CDS |
| ACCAACAAAAGCCATTCCAG+TGG | 0.708073 | 1_4:-32293357 | None:intergenic |
| TTGCGGCTCAGACATCAAGA+GGG | 0.737553 | 1_4:+32293494 | Msa0160240:CDS |
| AATTGACGTAATGGACAACG+AGG | 0.788942 | 1_4:+32293192 | Msa0160240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATATTTTTCAAAAAAGA+AGG | + | chr1_4:32295856-32295875 | Msa0160240:intron | 10.0% |
| !! | TAATATTAATGTATATATCT+AGG | + | chr1_4:32296308-32296327 | Msa0160240:intron | 10.0% |
| !!! | GATTTTATTTACTTAATATT+AGG | - | chr1_4:32297004-32297023 | None:intergenic | 10.0% |
| !! | TAATAACATAAATTGATATA+TGG | + | chr1_4:32298824-32298843 | Msa0160240:three_prime_UTR | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGC+TGG | - | chr1_4:32294185-32294204 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_4:32294186-32294205 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_4:32294186-32294205 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_4:32294186-32294205 | None:intergenic | 100.0% |
| !! | ATAAATAATTATGTATTGTG+TGG | - | chr1_4:32294324-32294343 | None:intergenic | 15.0% |
| !!! | TGTAGAATTTGAAATATAAA+GGG | - | chr1_4:32295907-32295926 | None:intergenic | 15.0% |
| !!! | ATGTAGAATTTGAAATATAA+AGG | - | chr1_4:32295908-32295927 | None:intergenic | 15.0% |
| !! | ACAAGATAAAGAAAAATTAA+TGG | - | chr1_4:32296057-32296076 | None:intergenic | 15.0% |
| !! | ATTTCAATTACTAAAGTTTA+GGG | + | chr1_4:32296428-32296447 | Msa0160240:intron | 15.0% |
| !! | TTGAATAGATATCTATAAAA+GGG | - | chr1_4:32296469-32296488 | None:intergenic | 15.0% |
| !! | ATTGAATAGATATCTATAAA+AGG | - | chr1_4:32296470-32296489 | None:intergenic | 15.0% |
| !!! | TTTGATTTTCTTTACAATTT+TGG | + | chr1_4:32297085-32297104 | Msa0160240:intron | 15.0% |
| !!! | TTGATTTTCTTTACAATTTT+GGG | + | chr1_4:32297086-32297105 | Msa0160240:intron | 15.0% |
| !! | TATAATTGTAATAATAAGTG+TGG | + | chr1_4:32297206-32297225 | Msa0160240:intron | 15.0% |
| !! | GTGATATATAATAATGATTT+AGG | + | chr1_4:32297290-32297309 | Msa0160240:intron | 15.0% |
| !!! | ATTTTCATTTTGCAAATTAA+AGG | + | chr1_4:32297972-32297991 | Msa0160240:intron | 15.0% |
| !!! | TTTTCATTTTGCAAATTAAA+GGG | + | chr1_4:32297973-32297992 | Msa0160240:intron | 15.0% |
| !!! | TTTTAATATGCTACATTTTT+AGG | + | chr1_4:32298104-32298123 | Msa0160240:intron | 15.0% |
| !!! | TTTAATATGCTACATTTTTA+GGG | + | chr1_4:32298105-32298124 | Msa0160240:intron | 15.0% |
| !!! | GCATAGTTTTTGTTTTAATT+TGG | + | chr1_4:32293228-32293247 | Msa0160240:intron | 20.0% |
| !! | AACTATGAAGAAAAGAATAA+AGG | - | chr1_4:32293573-32293592 | None:intergenic | 20.0% |
| !!! | CTTCAAATAAAAATGAGTTT+TGG | - | chr1_4:32293630-32293649 | None:intergenic | 20.0% |
| !!! | CAAAACTCATTTTTATTTGA+AGG | + | chr1_4:32293628-32293647 | Msa0160240:intron | 20.0% |
| !! | AGTCAGAAAAATGTTAATTA+TGG | + | chr1_4:32294230-32294249 | Msa0160240:intron | 20.0% |
| !! | GTCAGAAAAATGTTAATTAT+GGG | + | chr1_4:32294231-32294250 | Msa0160240:intron | 20.0% |
| !!! | ATTGCTGTTTTTATTCTTAT+TGG | + | chr1_4:32295237-32295256 | Msa0160240:CDS | 20.0% |
| !! | TAACACTTGAAAAAGTTAAA+AGG | + | chr1_4:32295368-32295387 | Msa0160240:intron | 20.0% |
| !!! | TAAGTACACAATTTGATAAT+TGG | + | chr1_4:32295485-32295504 | Msa0160240:intron | 20.0% |
| !! | GCAAAAATCTAATTATCAAT+TGG | - | chr1_4:32295549-32295568 | None:intergenic | 20.0% |
| !!! | ATTGTTATTTTATACACTTG+AGG | + | chr1_4:32295820-32295839 | Msa0160240:intron | 20.0% |
| !!! | TTGTTATTTTATACACTTGA+GGG | + | chr1_4:32295821-32295840 | Msa0160240:intron | 20.0% |
| !!! | ATTTGAAATATAAAGGGTTT+CGG | - | chr1_4:32295901-32295920 | None:intergenic | 20.0% |
| !! | AGAATATTACTTATTGGAAA+TGG | - | chr1_4:32295934-32295953 | None:intergenic | 20.0% |
| !! | GATTTCAATTACTAAAGTTT+AGG | + | chr1_4:32296427-32296446 | Msa0160240:intron | 20.0% |
| !!! | GATTTAGGAATTTGTTTTTT+TGG | + | chr1_4:32297305-32297324 | Msa0160240:intron | 20.0% |
| !! | GACTAATACTTTCAATTTAA+GGG | - | chr1_4:32297782-32297801 | None:intergenic | 20.0% |
| !! | TGACTAATACTTTCAATTTA+AGG | - | chr1_4:32297783-32297802 | None:intergenic | 20.0% |
| !!! | ATAGTTATTCCTCATTATTT+TGG | + | chr1_4:32298424-32298443 | Msa0160240:intron | 20.0% |
| ! | TCATAGTGTTCTTTATTCTA+TGG | + | chr1_4:32292724-32292743 | Msa0160240:CDS | 25.0% |
| ! | TTATTGTCTTACGATCAAAT+TGG | - | chr1_4:32292778-32292797 | None:intergenic | 25.0% |
| ! | TCGTAAGACAATAATATATC+TGG | + | chr1_4:32292784-32292803 | Msa0160240:intron | 25.0% |
| ! | GTATTAAGATTGCGTTAAAT+TGG | + | chr1_4:32292849-32292868 | Msa0160240:intron | 25.0% |
| !!! | TGATTTTATTCTCCACTTTT+TGG | + | chr1_4:32293029-32293048 | Msa0160240:intron | 25.0% |
| ! | TATACATTGATACCAAAAAG+TGG | - | chr1_4:32293044-32293063 | None:intergenic | 25.0% |
| !!! | TTATATCACAGAAGTATCTT+TGG | - | chr1_4:32293098-32293117 | None:intergenic | 25.0% |
| !!! | TTTTTTATTTTTGTGTGCGA+AGG | + | chr1_4:32293123-32293142 | Msa0160240:intron | 25.0% |
| ! | TAATTACACTTTCTTCAACT+TGG | + | chr1_4:32293161-32293180 | Msa0160240:CDS | 25.0% |
| ! | AATTACACTTTCTTCAACTT+GGG | + | chr1_4:32293162-32293181 | Msa0160240:CDS | 25.0% |
| !!! | TGTTTTAATTTGGCTTGTTT+TGG | + | chr1_4:32293238-32293257 | Msa0160240:intron | 25.0% |
| !!! | GTTTTAATTTGGCTTGTTTT+GGG | + | chr1_4:32293239-32293258 | Msa0160240:intron | 25.0% |
| !! | TCAAGATTATTTGGGTTTAT+TGG | + | chr1_4:32293293-32293312 | Msa0160240:CDS | 25.0% |
| ! | GAATAAAGGAATAACCTAAT+GGG | - | chr1_4:32293559-32293578 | None:intergenic | 25.0% |
| ! | AGAATAAAGGAATAACCTAA+TGG | - | chr1_4:32293560-32293579 | None:intergenic | 25.0% |
| !! | TACATGCTGTAAATTTTTCT+TGG | - | chr1_4:32293667-32293686 | None:intergenic | 25.0% |
| ! | AATCTCTGCAAATTTATCAA+TGG | + | chr1_4:32293881-32293900 | Msa0160240:intron | 25.0% |
| ! | ATCTCTGCAAATTTATCAAT+GGG | + | chr1_4:32293882-32293901 | Msa0160240:intron | 25.0% |
| ! | CAAATTTATCAATGGGATAT+AGG | + | chr1_4:32293889-32293908 | Msa0160240:intron | 25.0% |
| ! | GTAGCGTATCATATTTAATT+GGG | + | chr1_4:32294133-32294152 | Msa0160240:intron | 25.0% |
| ! | TAGCGTATCATATTTAATTG+GGG | + | chr1_4:32294134-32294153 | Msa0160240:intron | 25.0% |
| ! | AATTACTTGCACACTATTAT+AGG | - | chr1_4:32294161-32294180 | None:intergenic | 25.0% |
| ! | AATGTTAATTATGGGTATCA+TGG | + | chr1_4:32294239-32294258 | Msa0160240:intron | 25.0% |
| !!! | CACTTGTTAAACTACAATTT+TGG | + | chr1_4:32294865-32294884 | Msa0160240:intron | 25.0% |
| !!! | TACAATTTTGGTACTTAACT+AGG | + | chr1_4:32294877-32294896 | Msa0160240:intron | 25.0% |
| ! | AAATCAAAGGATGTAATCAA+GGG | - | chr1_4:32294929-32294948 | None:intergenic | 25.0% |
| ! | TAAATCAAAGGATGTAATCA+AGG | - | chr1_4:32294930-32294949 | None:intergenic | 25.0% |
| ! | ACTTGATCACAATAAATCAA+AGG | - | chr1_4:32294942-32294961 | None:intergenic | 25.0% |
| ! | ATGAAAGAAATCAAATGCAT+CGG | - | chr1_4:32294990-32295009 | None:intergenic | 25.0% |
| ! | CATCTTAAAAACACATATCA+TGG | - | chr1_4:32295077-32295096 | None:intergenic | 25.0% |
| ! | TTTGTGCTAACATGATATAT+AGG | + | chr1_4:32295415-32295434 | Msa0160240:intron | 25.0% |
| !! | TTTGAAATATAAAGGGTTTC+GGG | - | chr1_4:32295900-32295919 | None:intergenic | 25.0% |
| ! | TTGCTGAGAATATTACTTAT+TGG | - | chr1_4:32295940-32295959 | None:intergenic | 25.0% |
| ! | AAATAAGAAAAACTACCACA+AGG | - | chr1_4:32295982-32296001 | None:intergenic | 25.0% |
| ! | GATATATGAAGTGATCATAT+TGG | - | chr1_4:32296031-32296050 | None:intergenic | 25.0% |
| !! | AATTTTTCTTTATCTTGTGC+AGG | + | chr1_4:32296059-32296078 | Msa0160240:intron | 25.0% |
| !! | ATTTTTCTTTATCTTGTGCA+GGG | + | chr1_4:32296060-32296079 | Msa0160240:intron | 25.0% |
| ! | AAATTTAAGAAGCCAACAAA+AGG | - | chr1_4:32296132-32296151 | None:intergenic | 25.0% |
| ! | TAGTAATTGAAATCAACAAC+AGG | - | chr1_4:32296421-32296440 | None:intergenic | 25.0% |
| !! | GTCTATATATTGTAGTCTTT+TGG | - | chr1_4:32296952-32296971 | None:intergenic | 25.0% |
| ! | TTAATAGAATTTATGAGCCT+TGG | - | chr1_4:32296974-32296993 | None:intergenic | 25.0% |
| ! | AAAAAGTTGAATGGAAAGAA+CGG | + | chr1_4:32297128-32297147 | Msa0160240:intron | 25.0% |
| ! | CACATGCAAAATATAAACAA+TGG | - | chr1_4:32297479-32297498 | None:intergenic | 25.0% |
| !! | ATCTACTTTGTTTAACCTTT+AGG | - | chr1_4:32297689-32297708 | None:intergenic | 25.0% |
| ! | TTAAATTGTGGTTGTATACT+CGG | - | chr1_4:32297820-32297839 | None:intergenic | 25.0% |
| ! | AGTATACAACCACAATTTAA+AGG | + | chr1_4:32297820-32297839 | Msa0160240:intron | 25.0% |
| ! | AACTTAGAACCTTTAAATTG+TGG | - | chr1_4:32297832-32297851 | None:intergenic | 25.0% |
| ! | TGTAGCATATTAAAATGTTG+TGG | - | chr1_4:32298099-32298118 | None:intergenic | 25.0% |
| ! | GGAATGTATAAAATGCTATT+CGG | + | chr1_4:32298220-32298239 | Msa0160240:CDS | 25.0% |
| !! | ATAATCACAGCATTCTTTTT+GGG | + | chr1_4:32298578-32298597 | Msa0160240:CDS | 25.0% |
| ! | TACAGTAAGTGAACTATAAT+GGG | + | chr1_4:32298645-32298664 | Msa0160240:exon | 25.0% |
| ! | ATTTTCTTTTCCTACTCCTA+GGG | + | chr1_4:32292872-32292891 | Msa0160240:intron | 30.0% |
| ! | TTTTATATCTCTGTCCGTAT+AGG | + | chr1_4:32292980-32292999 | Msa0160240:CDS | 30.0% |
| AGTCAGGTTCAAGATTATTT+GGG | + | chr1_4:32293285-32293304 | Msa0160240:intron | 30.0% | |
| AAGCAAGAAATGGTTGTATA+GGG | - | chr1_4:32293401-32293420 | None:intergenic | 30.0% | |
| AAATAGAGATGCATTTGAGA+TGG | + | chr1_4:32293603-32293622 | Msa0160240:intron | 30.0% | |
| ! | ATGCTGTAAATTTTTCTTGG+AGG | - | chr1_4:32293664-32293683 | None:intergenic | 30.0% |
| AATTTACAGCATGTAGAACT+AGG | + | chr1_4:32293672-32293691 | Msa0160240:intron | 30.0% | |
| TGTAGGATAGTTATCTATGT+AGG | - | chr1_4:32293719-32293738 | None:intergenic | 30.0% | |
| AGATTGTAACAAAAGCAACT+TGG | + | chr1_4:32293785-32293804 | Msa0160240:intron | 30.0% | |
| ATCAAGATACAGAACAAAGA+TGG | + | chr1_4:32293927-32293946 | Msa0160240:intron | 30.0% | |
| TTAGAAATAAAAGCGAGTTG+AGG | - | chr1_4:32294049-32294068 | None:intergenic | 30.0% | |
| CGTAGCGTATCATATTTAAT+TGG | + | chr1_4:32294132-32294151 | Msa0160240:intron | 30.0% | |
| AACATTATGCTTCACTAAAG+CGG | - | chr1_4:32294439-32294458 | None:intergenic | 30.0% | |
| CTTTAGTGAAGCATAATGTT+TGG | + | chr1_4:32294439-32294458 | Msa0160240:CDS | 30.0% | |
| TGAACAATGATATATGCAAG+AGG | - | chr1_4:32294506-32294525 | None:intergenic | 30.0% | |
| TGCATATATCATTGTTCATC+TGG | + | chr1_4:32294508-32294527 | Msa0160240:CDS | 30.0% | |
| TTTGTCCTATAAGACATCTT+TGG | + | chr1_4:32294579-32294598 | Msa0160240:intron | 30.0% | |
| GATTACCAAAGATGTCTTAT+AGG | - | chr1_4:32294587-32294606 | None:intergenic | 30.0% | |
| ATAAAACCAGGCAAATGATA+CGG | - | chr1_4:32294736-32294755 | None:intergenic | 30.0% | |
| AATCAAAGGATGTAATCAAG+GGG | - | chr1_4:32294928-32294947 | None:intergenic | 30.0% | |
| AGAAAAGTTCTGTTTGTCTT+TGG | + | chr1_4:32295022-32295041 | Msa0160240:intron | 30.0% | |
| TATTGGACAACTAACCTTAA+CGG | + | chr1_4:32295254-32295273 | Msa0160240:CDS | 30.0% | |
| !! | TTTTGAAAAGCTTACCGTTA+AGG | - | chr1_4:32295271-32295290 | None:intergenic | 30.0% |
| ! | AAAAAATGACCTTTTCTGCT+TGG | + | chr1_4:32295287-32295306 | Msa0160240:intron | 30.0% |
| !!! | TTTGGACATTCTTTTAGAGT+TGG | + | chr1_4:32295311-32295330 | Msa0160240:intron | 30.0% |
| !!! | TTGGACATTCTTTTAGAGTT+GGG | + | chr1_4:32295312-32295331 | Msa0160240:intron | 30.0% |
| AGTTATTAACCAAAACCTGT+AGG | - | chr1_4:32295453-32295472 | None:intergenic | 30.0% | |
| GTAAACGAACTGCTATAATA+AGG | + | chr1_4:32295520-32295539 | Msa0160240:intron | 30.0% | |
| ATTAATGTTACCCATCTGAA+AGG | + | chr1_4:32295750-32295769 | Msa0160240:intron | 30.0% | |
| TGTATTTCAACCTTTCAGAT+GGG | - | chr1_4:32295763-32295782 | None:intergenic | 30.0% | |
| ATGTATTTCAACCTTTCAGA+TGG | - | chr1_4:32295764-32295783 | None:intergenic | 30.0% | |
| AGTAACAAAATGTATCCTTG+TGG | + | chr1_4:32295964-32295983 | Msa0160240:intron | 30.0% | |
| ! | TTTTTCTTTATCTTGTGCAG+GGG | + | chr1_4:32296061-32296080 | Msa0160240:intron | 30.0% |
| ATATCTAGGTTCAATGCTAT+AGG | + | chr1_4:32296322-32296341 | Msa0160240:intron | 30.0% | |
| TATATACCAATTAGGGAACA+GGG | - | chr1_4:32296794-32296813 | None:intergenic | 30.0% | |
| ATATATACCAATTAGGGAAC+AGG | - | chr1_4:32296795-32296814 | None:intergenic | 30.0% | |
| GTTCCCTAATTGGTATATAT+CGG | + | chr1_4:32296795-32296814 | Msa0160240:intron | 30.0% | |
| TTCCCTAATTGGTATATATC+GGG | + | chr1_4:32296796-32296815 | Msa0160240:intron | 30.0% | |
| AACCCGATATATACCAATTA+GGG | - | chr1_4:32296801-32296820 | None:intergenic | 30.0% | |
| AAACCCGATATATACCAATT+AGG | - | chr1_4:32296802-32296821 | None:intergenic | 30.0% | |
| TAATTGGTATATATCGGGTT+TGG | + | chr1_4:32296801-32296820 | Msa0160240:intron | 30.0% | |
| AGACTACAATATATAGACCA+AGG | + | chr1_4:32296954-32296973 | Msa0160240:intron | 30.0% | |
| ATAATTCCCTACAATACAAC+TGG | + | chr1_4:32297031-32297050 | Msa0160240:intron | 30.0% | |
| ! | GTTCTTTCCATTCAACTTTT+TGG | - | chr1_4:32297129-32297148 | None:intergenic | 30.0% |
| TAATACTTCCCTATAAGCTA+TGG | - | chr1_4:32297240-32297259 | None:intergenic | 30.0% | |
| TTCAGCATATGTTTCTTTCT+TGG | + | chr1_4:32297364-32297383 | Msa0160240:intron | 30.0% | |
| CATAAGTCTGTGTGTAATAA+AGG | + | chr1_4:32297431-32297450 | Msa0160240:intron | 30.0% | |
| !! | TTCATGTTCTAAAATGTTGC+AGG | + | chr1_4:32297547-32297566 | Msa0160240:intron | 30.0% |
| TTGTTACATATGTCGTTACA+AGG | + | chr1_4:32297570-32297589 | Msa0160240:CDS | 30.0% | |
| !! | TCTATTTGTTGTTGTTTCAG+AGG | + | chr1_4:32297607-32297626 | Msa0160240:CDS | 30.0% |
| GAAAGCTCAAACAAAAATGA+TGG | - | chr1_4:32297659-32297678 | None:intergenic | 30.0% | |
| ! | ACTTTGTTTAACCTTTAGGA+CGG | - | chr1_4:32297685-32297704 | None:intergenic | 30.0% |
| AAAGTAGATGTTGTAGATCT+TGG | + | chr1_4:32297700-32297719 | Msa0160240:intron | 30.0% | |
| AAGTAGATGTTGTAGATCTT+GGG | + | chr1_4:32297701-32297720 | Msa0160240:intron | 30.0% | |
| !!! | TAAAGGTTCTAAGTTTTCCT+CGG | + | chr1_4:32297837-32297856 | Msa0160240:intron | 30.0% |
| GCAATATGTAGTTCTTTCAT+TGG | + | chr1_4:32297881-32297900 | Msa0160240:intron | 30.0% | |
| ! | AGCCATGTACTATTTTCATT+TGG | + | chr1_4:32298051-32298070 | Msa0160240:intron | 30.0% |
| ! | GCCATGTACTATTTTCATTT+GGG | + | chr1_4:32298052-32298071 | Msa0160240:intron | 30.0% |
| TCCCAAATGAAAATAGTACA+TGG | - | chr1_4:32298056-32298075 | None:intergenic | 30.0% | |
| GTTCATTGAATGTACTTAAG+AGG | - | chr1_4:32298136-32298155 | None:intergenic | 30.0% | |
| ! | TCTTTTTACTGCTTTATACC+AGG | + | chr1_4:32298541-32298560 | Msa0160240:intron | 30.0% |
| ! | GATAATCACAGCATTCTTTT+TGG | + | chr1_4:32298577-32298596 | Msa0160240:CDS | 30.0% |
| GTACAGTAAGTGAACTATAA+TGG | + | chr1_4:32298644-32298663 | Msa0160240:exon | 30.0% | |
| !! | TTCTGAGATAAAAGCTAACA+CGG | + | chr1_4:32298725-32298744 | Msa0160240:three_prime_UTR | 30.0% |
| CATAAATTGATATATGGTGC+TGG | + | chr1_4:32298830-32298849 | Msa0160240:three_prime_UTR | 30.0% | |
| ! | GATTTTCTTTTCCTACTCCT+AGG | + | chr1_4:32292871-32292890 | Msa0160240:intron | 35.0% |
| ! | TTTTCTTTTCCTACTCCTAG+GGG | + | chr1_4:32292873-32292892 | Msa0160240:intron | 35.0% |
| TCTTGCATCATCAGTTAGTT+GGG | + | chr1_4:32292943-32292962 | Msa0160240:CDS | 35.0% | |
| CAGAGATATAAAACCATCCA+TGG | - | chr1_4:32292973-32292992 | None:intergenic | 35.0% | |
| ! | TCCGTATAGGATTGTTTCTT+TGG | + | chr1_4:32292993-32293012 | Msa0160240:CDS | 35.0% |
| CCCAAAGAAACAATCCTATA+CGG | - | chr1_4:32292997-32293016 | None:intergenic | 35.0% | |
| ! | CCGTATAGGATTGTTTCTTT+GGG | + | chr1_4:32292994-32293013 | Msa0160240:CDS | 35.0% |
| ! | TAGGATTGTTTCTTTGGGTA+TGG | + | chr1_4:32292999-32293018 | Msa0160240:intron | 35.0% |
| CAGTCAGGTTCAAGATTATT+TGG | + | chr1_4:32293284-32293303 | Msa0160240:intron | 35.0% | |
| CAAGCAAGAAATGGTTGTAT+AGG | - | chr1_4:32293402-32293421 | None:intergenic | 35.0% | |
| CTATACAACCATTTCTTGCT+TGG | + | chr1_4:32293400-32293419 | Msa0160240:intron | 35.0% | |
| AAGTGAAACCAAGCAAGAAA+TGG | - | chr1_4:32293411-32293430 | None:intergenic | 35.0% | |
| AAAGTAAGACTGCAAAAGAC+AGG | - | chr1_4:32293450-32293469 | None:intergenic | 35.0% | |
| !! | TTTGTTTGCTGCTTTGTTGA+TGG | + | chr1_4:32293468-32293487 | Msa0160240:CDS | 35.0% |
| AGATAACTATCCTACACTAC+TGG | + | chr1_4:32293723-32293742 | Msa0160240:intron | 35.0% | |
| !! | ATCCTACACTACTGGTTTAT+TGG | + | chr1_4:32293731-32293750 | Msa0160240:intron | 35.0% |
| !! | TCCTACACTACTGGTTTATT+GGG | + | chr1_4:32293732-32293751 | Msa0160240:intron | 35.0% |
| CAAACATGCCTGTTTGAAAA+GGG | - | chr1_4:32293811-32293830 | None:intergenic | 35.0% | |
| !! | AAGATTTGTTTTCTTGCACC+AGG | + | chr1_4:32293955-32293974 | Msa0160240:intron | 35.0% |
| ! | GTGATTTCTGAAGAGTGAAA+CGG | - | chr1_4:32294006-32294025 | None:intergenic | 35.0% |
| ! | CTAATCACAGATCAGCATTT+TGG | + | chr1_4:32294065-32294084 | Msa0160240:intron | 35.0% |
| CTCTTCATTCTTCTATTTCC+AGG | + | chr1_4:32294545-32294564 | Msa0160240:CDS | 35.0% | |
| CATTCTTCTATTTCCAGGTT+AGG | + | chr1_4:32294550-32294569 | Msa0160240:intron | 35.0% | |
| GCATCTCTGTTCTTACAAAA+TGG | + | chr1_4:32294614-32294633 | Msa0160240:intron | 35.0% | |
| GACACAAAACATAGCAAACA+CGG | - | chr1_4:32294678-32294697 | None:intergenic | 35.0% | |
| !!! | TGTTTGCTATGTTTTGTGTC+TGG | + | chr1_4:32294678-32294697 | Msa0160240:intron | 35.0% |
| TAAAACCAGGCAAATGATAC+GGG | - | chr1_4:32294735-32294754 | None:intergenic | 35.0% | |
| ! | TTTTATGCTCAGACTAGGAT+AGG | + | chr1_4:32294750-32294769 | Msa0160240:intron | 35.0% |
| TAGGATAGGTGGTATTTAGT+TGG | + | chr1_4:32294764-32294783 | Msa0160240:intron | 35.0% | |
| AGGATAGGTGGTATTTAGTT+GGG | + | chr1_4:32294765-32294784 | Msa0160240:intron | 35.0% | |
| AAGAAATAAACCACGCCAAA+TGG | - | chr1_4:32294792-32294811 | None:intergenic | 35.0% | |
| ! | CAAGCTTACTGATGATCTTT+TGG | - | chr1_4:32294820-32294839 | None:intergenic | 35.0% |
| AACCTGTATACGTCTCTAAA+AGG | + | chr1_4:32295105-32295124 | Msa0160240:intron | 35.0% | |
| !! | TACCTTTTAGAGACGTATAC+AGG | - | chr1_4:32295110-32295129 | None:intergenic | 35.0% |
| !!! | CATTCTTTTAGAGTTGGGTT+TGG | + | chr1_4:32295317-32295336 | Msa0160240:intron | 35.0% |
| ATAAAATAATGCTAGCGCAC+TGG | - | chr1_4:32295579-32295598 | None:intergenic | 35.0% | |
| TATTTGCTTTCTCGTTCAAG+TGG | + | chr1_4:32295596-32295615 | Msa0160240:intron | 35.0% | |
| TGTATTCAAGTGTTTGTGTG+TGG | - | chr1_4:32295723-32295742 | None:intergenic | 35.0% | |
| ! | ATATGCTTGACTCCTTTTGT+TGG | + | chr1_4:32296117-32296136 | Msa0160240:CDS | 35.0% |
| TATTTGTGAGACACTGAGAA+AGG | + | chr1_4:32296191-32296210 | Msa0160240:CDS | 35.0% | |
| ATTGAAATCAACAACAGGCT+AGG | - | chr1_4:32296416-32296435 | None:intergenic | 35.0% | |
| !! | TCTTTGTTATTAGAGCTCTC+TGG | + | chr1_4:32296490-32296509 | Msa0160240:intron | 35.0% |
| AGCTATGAGAAAGTAAACAC+AGG | - | chr1_4:32296857-32296876 | None:intergenic | 35.0% | |
| CTTTCTGATGATTCAACCAA+TGG | - | chr1_4:32297062-32297081 | None:intergenic | 35.0% | |
| ! | CATTGGTTGAATCATCAGAA+AGG | + | chr1_4:32297060-32297079 | Msa0160240:intron | 35.0% |
| !!! | ATTCAACTTTTTGGTGGTGA+TGG | - | chr1_4:32297120-32297139 | None:intergenic | 35.0% |
| ATCACCACCAAAAAGTTGAA+TGG | + | chr1_4:32297119-32297138 | Msa0160240:intron | 35.0% | |
| ! | CTTTCCATTCAACTTTTTGG+TGG | - | chr1_4:32297126-32297145 | None:intergenic | 35.0% |
| AACATGTAGTTCTTAGACCA+GGG | + | chr1_4:32297159-32297178 | Msa0160240:intron | 35.0% | |
| CCTATATGCCATAGCTTATA+GGG | + | chr1_4:32297229-32297248 | Msa0160240:intron | 35.0% | |
| ACAAATAGAAGTTCTCTTCC+AGG | - | chr1_4:32297596-32297615 | None:intergenic | 35.0% | |
| ! | CCATTTTACAAATTCACTCG+TGG | - | chr1_4:32297750-32297769 | None:intergenic | 35.0% |
| CCACGAGTGAATTTGTAAAA+TGG | + | chr1_4:32297747-32297766 | Msa0160240:intron | 35.0% | |
| ! | TGATGAGTGTGTTTCTAAAG+AGG | + | chr1_4:32297907-32297926 | Msa0160240:intron | 35.0% |
| !! | GTGTTTCTAAAGAGGTACTT+TGG | + | chr1_4:32297915-32297934 | Msa0160240:intron | 35.0% |
| AATGATAAGTTCACGCATAC+CGG | - | chr1_4:32298289-32298308 | None:intergenic | 35.0% | |
| ACACTGTATGTTCAATCTGA+TGG | + | chr1_4:32298512-32298531 | Msa0160240:intron | 35.0% | |
| !! | AGTGAACTATAATGGGTGAT+CGG | + | chr1_4:32298652-32298671 | Msa0160240:exon | 35.0% |
| CAAATGAAAAATGCATGAGC+TGG | + | chr1_4:32298680-32298699 | Msa0160240:three_prime_UTR | 35.0% | |
| AGGGATGCTTGAAAGAATTT+GGG | - | chr1_4:32298759-32298778 | None:intergenic | 35.0% | |
| AAGGGATGCTTGAAAGAATT+TGG | - | chr1_4:32298760-32298779 | None:intergenic | 35.0% | |
| CTATGGCACTATTCATCATC+TGG | + | chr1_4:32292741-32292760 | Msa0160240:CDS | 40.0% | |
| GTCTTGCATCATCAGTTAGT+TGG | + | chr1_4:32292942-32292961 | Msa0160240:CDS | 40.0% | |
| TCAGTTAGTTGGGATAACCA+TGG | + | chr1_4:32292953-32292972 | Msa0160240:CDS | 40.0% | |
| TTAGTTGGGATAACCATGGA+TGG | + | chr1_4:32292957-32292976 | Msa0160240:CDS | 40.0% | |
| ACTTTCTTCAACTTGGGCAA+GGG | + | chr1_4:32293168-32293187 | Msa0160240:CDS | 40.0% | |
| !! | AATTGACGTAATGGACAACG+AGG | + | chr1_4:32293192-32293211 | Msa0160240:CDS | 40.0% |
| TGAACCCAGAGAATGTTAAG+TGG | - | chr1_4:32293266-32293285 | None:intergenic | 40.0% | |
| ! | TTATTTGGGTTTATTGGCGC+CGG | + | chr1_4:32293299-32293318 | Msa0160240:CDS | 40.0% |
| TGATCCACAAAGTTGTCCAA+GGG | - | chr1_4:32293330-32293349 | None:intergenic | 40.0% | |
| TAGGGACATGCAAACTTACA+TGG | - | chr1_4:32293383-32293402 | None:intergenic | 40.0% | |
| ! | TGCTTTGTTGATGGAACTTG+CGG | + | chr1_4:32293477-32293496 | Msa0160240:CDS | 40.0% |
| CGATACATCTCATGTTGAAG+AGG | + | chr1_4:32293525-32293544 | Msa0160240:CDS | 40.0% | |
| AGAACTAGGCATCAAACTCT+AGG | + | chr1_4:32293686-32293705 | Msa0160240:intron | 40.0% | |
| ACCCAATAAACCAGTAGTGT+AGG | - | chr1_4:32293736-32293755 | None:intergenic | 40.0% | |
| !! | TACACTACTGGTTTATTGGG+TGG | + | chr1_4:32293735-32293754 | Msa0160240:intron | 40.0% |
| !! | ACACTACTGGTTTATTGGGT+GGG | + | chr1_4:32293736-32293755 | Msa0160240:intron | 40.0% |
| GCAAACATGCCTGTTTGAAA+AGG | - | chr1_4:32293812-32293831 | None:intergenic | 40.0% | |
| ATGTTTGCCAACTCTGAATG+TGG | + | chr1_4:32293824-32293843 | Msa0160240:intron | 40.0% | |
| TGTTTGCCAACTCTGAATGT+GGG | + | chr1_4:32293825-32293844 | Msa0160240:intron | 40.0% | |
| TTCTTTCCCACATTCAGAGT+TGG | - | chr1_4:32293834-32293853 | None:intergenic | 40.0% | |
| ! | TTTCTGAAGAGTGAAACGGA+GGG | - | chr1_4:32294002-32294021 | None:intergenic | 40.0% |
| ! | ATTTCTGAAGAGTGAAACGG+AGG | - | chr1_4:32294003-32294022 | None:intergenic | 40.0% |
| ! | GAAATAAAAGCGAGTTGAGG+TGG | - | chr1_4:32294046-32294065 | None:intergenic | 40.0% |
| TGATTCCAACCCTGAAAATG+AGG | + | chr1_4:32294362-32294381 | Msa0160240:CDS | 40.0% | |
| !! | TCTCACTAGCCTCATTTTCA+GGG | - | chr1_4:32294374-32294393 | None:intergenic | 40.0% |
| !! | ATCTCACTAGCCTCATTTTC+AGG | - | chr1_4:32294375-32294394 | None:intergenic | 40.0% |
| AGGACTGAACACACTCTAAA+AGG | + | chr1_4:32294399-32294418 | Msa0160240:CDS | 40.0% | |
| TCACTAAAGCGGATGACTTT+GGG | - | chr1_4:32294428-32294447 | None:intergenic | 40.0% | |
| TTCACTAAAGCGGATGACTT+TGG | - | chr1_4:32294429-32294448 | None:intergenic | 40.0% | |
| GCATAATGTTTGGCCCATAT+TGG | + | chr1_4:32294449-32294468 | Msa0160240:CDS | 40.0% | |
| AATGTTTGGCCCATATTGGA+AGG | + | chr1_4:32294453-32294472 | Msa0160240:CDS | 40.0% | |
| GTATAAAGCTCTATTGCCTC+CGG | + | chr1_4:32294636-32294655 | Msa0160240:intron | 40.0% | |
| CAAAACAGAATAAGATCCGG+AGG | - | chr1_4:32294655-32294674 | None:intergenic | 40.0% | |
| CGGCAAAACAGAATAAGATC+CGG | - | chr1_4:32294658-32294677 | None:intergenic | 40.0% | |
| TTATTCCCGTATCATTTGCC+TGG | + | chr1_4:32294727-32294746 | Msa0160240:intron | 40.0% | |
| GGTATTTAGTTGGGTCCATT+TGG | + | chr1_4:32294774-32294793 | Msa0160240:intron | 40.0% | |
| ! | TGGATGATCAATCTCTGAAG+TGG | + | chr1_4:32295042-32295061 | Msa0160240:intron | 40.0% |
| TCACTTTCTGCAATCACAAC+TGG | - | chr1_4:32295149-32295168 | None:intergenic | 40.0% | |
| ! | TGACCTTTTCTGCTTGGATT+TGG | + | chr1_4:32295293-32295312 | Msa0160240:intron | 40.0% |
| TGTCCAAATCCAAGCAGAAA+AGG | - | chr1_4:32295299-32295318 | None:intergenic | 40.0% | |
| ! | TAAAGTGCACCTACAGGTTT+TGG | + | chr1_4:32295441-32295460 | Msa0160240:intron | 40.0% |
| ! | ATTTAGCAGCTCTAGCTGTT+TGG | + | chr1_4:32296148-32296167 | Msa0160240:CDS | 40.0% |
| CTAGGACTTTACGGAAACTA+AGG | - | chr1_4:32296398-32296417 | None:intergenic | 40.0% | |
| AACAACAGGCTAGGACTTTA+CGG | - | chr1_4:32296407-32296426 | None:intergenic | 40.0% | |
| GCTAAGGCAAAATAAAGGGA+GGG | - | chr1_4:32296521-32296540 | None:intergenic | 40.0% | |
| GACGGCTAAGGCAAAATAAA+GGG | - | chr1_4:32296525-32296544 | None:intergenic | 40.0% | |
| ACTAGACGACTACTCACAAT+GGG | - | chr1_4:32296584-32296603 | None:intergenic | 40.0% | |
| CCAAGATTTGGCAAGAATAC+AGG | - | chr1_4:32296659-32296678 | None:intergenic | 40.0% | |
| CCTGTATTCTTGCCAAATCT+TGG | + | chr1_4:32296656-32296675 | Msa0160240:intron | 40.0% | |
| ! | GGTATATATCGGGTTTGGTT+TGG | + | chr1_4:32296806-32296825 | Msa0160240:intron | 40.0% |
| ATAGCTGAATATCCCAAGAC+TGG | + | chr1_4:32296871-32296890 | Msa0160240:intron | 40.0% | |
| !! | CCATTTTCAAGACCAGTCTT+GGG | - | chr1_4:32296886-32296905 | None:intergenic | 40.0% |
| !! | TCCATTTTCAAGACCAGTCT+TGG | - | chr1_4:32296887-32296906 | None:intergenic | 40.0% |
| GAGTGACCAGTTGTATTGTA+GGG | - | chr1_4:32297040-32297059 | None:intergenic | 40.0% | |
| AATACAACTGGTCACTCCAT+TGG | + | chr1_4:32297043-32297062 | Msa0160240:intron | 40.0% | |
| !!! | AACTTTTTGGTGGTGATGGT+AGG | - | chr1_4:32297116-32297135 | None:intergenic | 40.0% |
| GTTGAATGGAAAGAACGGTT+TGG | + | chr1_4:32297133-32297152 | Msa0160240:intron | 40.0% | |
| CAACATGTAGTTCTTAGACC+AGG | + | chr1_4:32297158-32297177 | Msa0160240:intron | 40.0% | |
| !!! | CAGGGTCTTTTTGAGTATGT+CGG | + | chr1_4:32297177-32297196 | Msa0160240:intron | 40.0% |
| GCCTATATGCCATAGCTTAT+AGG | + | chr1_4:32297228-32297247 | Msa0160240:intron | 40.0% | |
| CCCTATAAGCTATGGCATAT+AGG | - | chr1_4:32297232-32297251 | None:intergenic | 40.0% | |
| GTGGTTGTATACTCGGAAAA+GGG | - | chr1_4:32297813-32297832 | None:intergenic | 40.0% | |
| TGTGGTTGTATACTCGGAAA+AGG | - | chr1_4:32297814-32297833 | None:intergenic | 40.0% | |
| GTGAAGCAAGAAACTGTTCA+AGG | + | chr1_4:32297859-32297878 | Msa0160240:intron | 40.0% | |
| ATGCTATTCGGTACCCAAAA+CGG | + | chr1_4:32298232-32298251 | Msa0160240:CDS | 40.0% | |
| AACCAACACAGCTATTTGAG+AGG | - | chr1_4:32298322-32298341 | None:intergenic | 40.0% | |
| CCAGGAAAGCCAAAATAATG+AGG | - | chr1_4:32298436-32298455 | None:intergenic | 40.0% | |
| !!! | CCTCATTATTTTGGCTTTCC+TGG | + | chr1_4:32298433-32298452 | Msa0160240:intron | 40.0% |
| ! | TATACCAGGTTTGTTTGCTG+TGG | + | chr1_4:32298555-32298574 | Msa0160240:intron | 40.0% |
| TTATCCACAGCAAACAAACC+TGG | - | chr1_4:32298562-32298581 | None:intergenic | 40.0% | |
| TTTCAAGCATCCCTTCTAAG+CGG | + | chr1_4:32298765-32298784 | Msa0160240:three_prime_UTR | 40.0% | |
| ATCTTTCGAGGTCAAAGCAG+TGG | - | chr1_4:32292900-32292919 | None:intergenic | 45.0% | |
| ACCTCGAAAGATGCGAAACT+TGG | + | chr1_4:32292908-32292927 | Msa0160240:CDS | 45.0% | |
| ACCAAGTTTCGCATCTTTCG+AGG | - | chr1_4:32292912-32292931 | None:intergenic | 45.0% | |
| ! | GATGCGAAACTTGGTGATCA+AGG | + | chr1_4:32292917-32292936 | Msa0160240:CDS | 45.0% |
| CACTTTCTTCAACTTGGGCA+AGG | + | chr1_4:32293167-32293186 | Msa0160240:CDS | 45.0% | |
| GGCAAGGGTAATTGACGTAA+TGG | + | chr1_4:32293183-32293202 | Msa0160240:CDS | 45.0% | |
| TGGGTCCACTTAACATTCTC+TGG | + | chr1_4:32293258-32293277 | Msa0160240:intron | 45.0% | |
| GGGTCCACTTAACATTCTCT+GGG | + | chr1_4:32293259-32293278 | Msa0160240:intron | 45.0% | |
| AACATTCTCTGGGTTCAGTC+AGG | + | chr1_4:32293269-32293288 | Msa0160240:intron | 45.0% | |
| GTGATCCACAAAGTTGTCCA+AGG | - | chr1_4:32293331-32293350 | None:intergenic | 45.0% | |
| ATCACTGTTTGCCACTGGAA+TGG | + | chr1_4:32293346-32293365 | Msa0160240:CDS | 45.0% | |
| ACCAACAAAAGCCATTCCAG+TGG | - | chr1_4:32293360-32293379 | None:intergenic | 45.0% | |
| AAGAGGAACTGTCTCCCATT+AGG | + | chr1_4:32293542-32293561 | Msa0160240:CDS | 45.0% | |
| ! | CAACTTGGCCCTTTTCAAAC+AGG | + | chr1_4:32293800-32293819 | Msa0160240:intron | 45.0% |
| GACGAGACAATGATATGTCC+TGG | - | chr1_4:32293976-32293995 | None:intergenic | 45.0% | |
| ! | AGTTGAGGTGGTTAGTTAGG+AGG | - | chr1_4:32294034-32294053 | None:intergenic | 45.0% |
| TACGAGAGCAAGGAACAAAG+TGG | - | chr1_4:32294116-32294135 | None:intergenic | 45.0% | |
| TATGATACGCTACGAGAGCA+AGG | - | chr1_4:32294126-32294145 | None:intergenic | 45.0% | |
| ! | TTTTCTGACTTCCCTCTGTG+CGG | - | chr1_4:32294220-32294239 | None:intergenic | 45.0% |
| !! | ACTAGCCTCATTTTCAGGGT+TGG | - | chr1_4:32294370-32294389 | None:intergenic | 45.0% |
| ATGAGGCTAGTGAGATTGAC+AGG | + | chr1_4:32294379-32294398 | Msa0160240:CDS | 45.0% | |
| CACTAAAGCGGATGACTTTG+GGG | - | chr1_4:32294427-32294446 | None:intergenic | 45.0% | |
| AGCCAGAGTCCTTCCAATAT+GGG | - | chr1_4:32294465-32294484 | None:intergenic | 45.0% | |
| AAGCCAGAGTCCTTCCAATA+TGG | - | chr1_4:32294466-32294485 | None:intergenic | 45.0% | |
| GGACAAAAGATCACCTAACC+TGG | - | chr1_4:32294566-32294585 | None:intergenic | 45.0% | |
| ! | TGTTTTGTGTCTGGTTGTCG+TGG | + | chr1_4:32294687-32294706 | Msa0160240:intron | 45.0% |
| ! | GTTTTGTGTCTGGTTGTCGT+GGG | + | chr1_4:32294688-32294707 | Msa0160240:intron | 45.0% |
| GATACGGGAATAAGACCAAG+CGG | - | chr1_4:32294720-32294739 | None:intergenic | 45.0% | |
| CCTAGTCTGAGCATAAAACC+AGG | - | chr1_4:32294748-32294767 | None:intergenic | 45.0% | |
| !!! | CCTGGTTTTATGCTCAGACT+AGG | + | chr1_4:32294745-32294764 | Msa0160240:intron | 45.0% |
| TATGCTCAGACTAGGATAGG+TGG | + | chr1_4:32294753-32294772 | Msa0160240:intron | 45.0% | |
| AAGAGAGCTAGTAACTGTGC+TGG | - | chr1_4:32295181-32295200 | None:intergenic | 45.0% | |
| ! | AGCACAGTTACTAGCTCTCT+TGG | + | chr1_4:32295180-32295199 | Msa0160240:CDS | 45.0% |
| AGGAACTAAAGTGCACCTAC+AGG | + | chr1_4:32295435-32295454 | Msa0160240:intron | 45.0% | |
| AAATAATGCTAGCGCACTGG+AGG | - | chr1_4:32295576-32295595 | None:intergenic | 45.0% | |
| TGCTTTCTCGTTCAAGTGGT+AGG | + | chr1_4:32295600-32295619 | Msa0160240:intron | 45.0% | |
| !!! | CTGCAGATGTGCGGTTTTTT+AGG | - | chr1_4:32295637-32295656 | None:intergenic | 45.0% |
| ATCTGCAGTAGCTCTTGACA+AGG | + | chr1_4:32295649-32295668 | Msa0160240:intron | 45.0% | |
| GGCTAAGGCAAAATAAAGGG+AGG | - | chr1_4:32296522-32296541 | None:intergenic | 45.0% | |
| GGACGGCTAAGGCAAAATAA+AGG | - | chr1_4:32296526-32296545 | None:intergenic | 45.0% | |
| CTTAGCCGTCCTTTCAGTTT+GGG | + | chr1_4:32296535-32296554 | Msa0160240:intron | 45.0% | |
| TTAGCCGTCCTTTCAGTTTG+GGG | + | chr1_4:32296536-32296555 | Msa0160240:intron | 45.0% | |
| CACTAGACGACTACTCACAA+TGG | - | chr1_4:32296585-32296604 | None:intergenic | 45.0% | |
| GAGTAGTCGTCTAGTGTCAA+AGG | + | chr1_4:32296589-32296608 | Msa0160240:intron | 45.0% | |
| AGAATACAGGAAGAGAAGGC+CGG | - | chr1_4:32296646-32296665 | None:intergenic | 45.0% | |
| GGCAAGAATACAGGAAGAGA+AGG | - | chr1_4:32296650-32296669 | None:intergenic | 45.0% | |
| !! | CCCAAGACTGGTCTTGAAAA+TGG | + | chr1_4:32296883-32296902 | Msa0160240:intron | 45.0% |
| GGAGTGACCAGTTGTATTGT+AGG | - | chr1_4:32297041-32297060 | None:intergenic | 45.0% | |
| CGACATACTCAAAAAGACCC+TGG | - | chr1_4:32297179-32297198 | None:intergenic | 45.0% | |
| ACATATGTCGTTACAAGGCC+TGG | + | chr1_4:32297575-32297594 | Msa0160240:CDS | 45.0% | |
| GAGCTTTCTTTCCGTCCTAA+AGG | + | chr1_4:32297671-32297690 | Msa0160240:intron | 45.0% | |
| ! | TTGGGCTTGTAGAAGCACAT+AGG | + | chr1_4:32297719-32297738 | Msa0160240:intron | 45.0% |
| AACAGTTTCTTGCTTCACCG+AGG | - | chr1_4:32297857-32297876 | None:intergenic | 45.0% | |
| GCAGATATGCATAGATGTGC+TGG | + | chr1_4:32298168-32298187 | Msa0160240:intron | 45.0% | |
| !! | GATGTGCTGGTTCAAAGACT+TGG | + | chr1_4:32298181-32298200 | Msa0160240:CDS | 45.0% |
| !!! | AGTTGATGGGCTTCCGTTTT+GGG | - | chr1_4:32298248-32298267 | None:intergenic | 45.0% |
| CATAAAGGGCAGCAGTTGAT+GGG | - | chr1_4:32298261-32298280 | None:intergenic | 45.0% | |
| ATAAGTTCACGCATACCGGA+AGG | - | chr1_4:32298285-32298304 | None:intergenic | 45.0% | |
| CACAGCTATTTGAGAGGAGA+TGG | - | chr1_4:32298316-32298335 | None:intergenic | 45.0% | |
| CTCCTCTCAAATAGCTGTGT+TGG | + | chr1_4:32298317-32298336 | Msa0160240:intron | 45.0% | |
| GTGTAAAGCAGCAATGTACC+AGG | - | chr1_4:32298454-32298473 | None:intergenic | 45.0% | |
| TTGAAAGTTGAGCTTGCCTG+CGG | - | chr1_4:32298604-32298623 | None:intergenic | 45.0% | |
| CAGGCAAGCTCAACTTTCAA+AGG | + | chr1_4:32298604-32298623 | Msa0160240:CDS | 45.0% | |
| TTCAAGCATCCCTTCTAAGC+GGG | + | chr1_4:32298766-32298785 | Msa0160240:three_prime_UTR | 45.0% | |
| ATCCCTTCTAAGCGGGTAAT+TGG | + | chr1_4:32298773-32298792 | Msa0160240:three_prime_UTR | 45.0% | |
| CTCCAATTACCCGCTTAGAA+GGG | - | chr1_4:32298778-32298797 | None:intergenic | 45.0% | |
| TCCACAAAGTTGTCCAAGGG+TGG | - | chr1_4:32293327-32293346 | None:intergenic | 50.0% | |
| TGTGGATCACTGTTTGCCAC+TGG | + | chr1_4:32293341-32293360 | Msa0160240:CDS | 50.0% | |
| ! | GCCACTGGAATGGCTTTTGT+TGG | + | chr1_4:32293356-32293375 | Msa0160240:CDS | 50.0% |
| TTGCGGCTCAGACATCAAGA+GGG | + | chr1_4:32293494-32293513 | Msa0160240:CDS | 50.0% | |
| ! | GAGGTGGTTAGTTAGGAGGT+AGG | - | chr1_4:32294030-32294049 | None:intergenic | 50.0% |
| ! | GCGAGTTGAGGTGGTTAGTT+AGG | - | chr1_4:32294037-32294056 | None:intergenic | 50.0% |
| TTTCTGACTTCCCTCTGTGC+GGG | - | chr1_4:32294219-32294238 | None:intergenic | 50.0% | |
| TTAGTTGGGTCCATTTGGCG+TGG | + | chr1_4:32294779-32294798 | Msa0160240:intron | 50.0% | |
| TCTCGTTCAAGTGGTAGGAG+AGG | + | chr1_4:32295605-32295624 | Msa0160240:intron | 50.0% | |
| CAAGAGCTACTGCAGATGTG+CGG | - | chr1_4:32295646-32295665 | None:intergenic | 50.0% | |
| TGCAGTAGCTCTTGACAAGG+AGG | + | chr1_4:32295652-32295671 | Msa0160240:intron | 50.0% | |
| GGCGCATTCTTACTGTTGCT+GGG | + | chr1_4:32296082-32296101 | Msa0160240:CDS | 50.0% | |
| GCGCATTCTTACTGTTGCTG+GGG | + | chr1_4:32296083-32296102 | Msa0160240:CDS | 50.0% | |
| CTCTAGCTGTTTGGCCAGAT+TGG | + | chr1_4:32296157-32296176 | Msa0160240:CDS | 50.0% | |
| AGCTGTTTGGCCAGATTGGA+TGG | + | chr1_4:32296161-32296180 | Msa0160240:CDS | 50.0% | |
| TGTTTGGCCAGATTGGATGG+TGG | + | chr1_4:32296164-32296183 | Msa0160240:CDS | 50.0% | |
| ATAGCCACCACCATCCAATC+TGG | - | chr1_4:32296174-32296193 | None:intergenic | 50.0% | |
| CCAAACTGAAAGGACGGCTA+AGG | - | chr1_4:32296537-32296556 | None:intergenic | 50.0% | |
| CCTTAGCCGTCCTTTCAGTT+TGG | + | chr1_4:32296534-32296553 | Msa0160240:intron | 50.0% | |
| GAAGCCCCAAACTGAAAGGA+CGG | - | chr1_4:32296543-32296562 | None:intergenic | 50.0% | |
| AGCTGAAGCCCCAAACTGAA+AGG | - | chr1_4:32296547-32296566 | None:intergenic | 50.0% | |
| !! | TTGGCTGCTTCTGAGATGGA+CGG | - | chr1_4:32296623-32296642 | None:intergenic | 50.0% |
| ACTGTGGCAAAGCAGAACCA+AGG | - | chr1_4:32296737-32296756 | None:intergenic | 50.0% | |
| GGTTCTGCTTTGCCACAGTT+TGG | + | chr1_4:32296738-32296757 | Msa0160240:intron | 50.0% | |
| AGGATGCAACGACCAAACTG+TGG | - | chr1_4:32296753-32296772 | None:intergenic | 50.0% | |
| GCATCCTGCAATTGTTTGCC+TGG | + | chr1_4:32296766-32296785 | Msa0160240:intron | 50.0% | |
| TGTTGTGGCAGTGAAGTCGT+TGG | - | chr1_4:32298084-32298103 | None:intergenic | 50.0% | |
| !!! | CAGTTGATGGGCTTCCGTTT+TGG | - | chr1_4:32298249-32298268 | None:intergenic | 50.0% |
| CCATAAAGGGCAGCAGTTGA+TGG | - | chr1_4:32298262-32298281 | None:intergenic | 50.0% | |
| CCATCAACTGCTGCCCTTTA+TGG | + | chr1_4:32298259-32298278 | Msa0160240:CDS | 50.0% | |
| GCATACCGGAAGGCCATAAA+GGG | - | chr1_4:32298275-32298294 | None:intergenic | 50.0% | |
| CCTCCAATTACCCGCTTAGA+AGG | - | chr1_4:32298779-32298798 | None:intergenic | 50.0% | |
| CCTTCTAAGCGGGTAATTGG+AGG | + | chr1_4:32298776-32298795 | Msa0160240:three_prime_UTR | 50.0% | |
| AAGTTGTCCAAGGGTGGCAC+CGG | - | chr1_4:32293321-32293340 | None:intergenic | 55.0% | |
| GCCACCCTTGGACAACTTTG+TGG | + | chr1_4:32293323-32293342 | Msa0160240:CDS | 55.0% | |
| CTTGCGGCTCAGACATCAAG+AGG | + | chr1_4:32293493-32293512 | Msa0160240:CDS | 55.0% | |
| TTCTGACTTCCCTCTGTGCG+GGG | - | chr1_4:32294218-32294237 | None:intergenic | 55.0% | |
| GGCCCATATTGGAAGGACTC+TGG | + | chr1_4:32294460-32294479 | Msa0160240:CDS | 55.0% | |
| ! | TGTCGTGGGTTGTAACCGCT+TGG | + | chr1_4:32294702-32294721 | Msa0160240:intron | 55.0% |
| ATGCTAGCGCACTGGAGGAA+TGG | - | chr1_4:32295571-32295590 | None:intergenic | 55.0% | |
| GGGCGCATTCTTACTGTTGC+TGG | + | chr1_4:32296081-32296100 | Msa0160240:CDS | 55.0% | |
| ! | TTGGCCAGATTGGATGGTGG+TGG | + | chr1_4:32296167-32296186 | Msa0160240:CDS | 55.0% |
| GCTTCAGCTACTGTGAGCAC+TGG | + | chr1_4:32296558-32296577 | Msa0160240:intron | 55.0% | |
| CCATCTCAGAAGCAGCCAAC+CGG | + | chr1_4:32296624-32296643 | Msa0160240:intron | 55.0% | |
| TACAGGAAGAGAAGGCCGGT+TGG | - | chr1_4:32296642-32296661 | None:intergenic | 55.0% | |
| GCTGACAACCAGGGAGATAC+CGG | - | chr1_4:32296711-32296730 | None:intergenic | 55.0% | |
| !! | CCAAGGAGTGCTGACAACCA+GGG | - | chr1_4:32296720-32296739 | None:intergenic | 55.0% |
| !! | ACCAAGGAGTGCTGACAACC+AGG | - | chr1_4:32296721-32296740 | None:intergenic | 55.0% |
| GGCACCAGGCAAACAATTGC+AGG | - | chr1_4:32296773-32296792 | None:intergenic | 55.0% | |
| ! | CAATTAGGGAACAGGGCACC+AGG | - | chr1_4:32296787-32296806 | None:intergenic | 55.0% |
| CTGGTGCCCTGTTCCCTAAT+TGG | + | chr1_4:32296785-32296804 | Msa0160240:intron | 55.0% | |
| GTGGCAGTGAAGTCGTTGGT+TGG | - | chr1_4:32298080-32298099 | None:intergenic | 55.0% | |
| TGCTGCCCTTTATGGCCTTC+CGG | + | chr1_4:32298267-32298286 | Msa0160240:CDS | 55.0% | |
| CGCATACCGGAAGGCCATAA+AGG | - | chr1_4:32298276-32298295 | None:intergenic | 55.0% | |
| !! | CAGCATTCTTTTTGGGCCGC+AGG | + | chr1_4:32298585-32298604 | Msa0160240:CDS | 55.0% |
| AGCAGTGGACCCCTAGGAGT+AGG | - | chr1_4:32292885-32292904 | None:intergenic | 60.0% | |
| GGTCAAAGCAGTGGACCCCT+AGG | - | chr1_4:32292891-32292910 | None:intergenic | 60.0% | |
| TTCCCTCTGTGCGGGGCTTT+GGG | - | chr1_4:32294211-32294230 | None:intergenic | 60.0% | |
| ! | CCGGTTGGCTGCTTCTGAGA+TGG | - | chr1_4:32296627-32296646 | None:intergenic | 60.0% |
| GTCTTGCCAGACCTCGCAAC+CGG | + | chr1_4:32296689-32296708 | Msa0160240:intron | 60.0% | |
| ! | GAGATACCGGTTGCGAGGTC+TGG | - | chr1_4:32296698-32296717 | None:intergenic | 60.0% |
| CCCTGGTTGTCAGCACTCCT+TGG | + | chr1_4:32296717-32296736 | Msa0160240:intron | 60.0% | |
| CTTGGAGATGCTGCAGCAGC+TGG | + | chr1_4:32298199-32298218 | Msa0160240:CDS | 60.0% | |
| TCCCTCTGTGCGGGGCTTTG+GGG | - | chr1_4:32294210-32294229 | None:intergenic | 65.0% | |
| CTTCCCTCTGTGCGGGGCTT+TGG | - | chr1_4:32294212-32294231 | None:intergenic | 65.0% | |
| ! | CCAGGGAGATACCGGTTGCG+AGG | - | chr1_4:32296703-32296722 | None:intergenic | 65.0% |
| CCTCGCAACCGGTATCTCCC+TGG | + | chr1_4:32296700-32296719 | Msa0160240:intron | 65.0% | |
| !! | ATTGGCGCCGGTGCCACCCT+TGG | + | chr1_4:32293311-32293330 | Msa0160240:CDS | 70.0% |
| !! | TCTGTGCGGGGCTTTGGGGG+GGG | - | chr1_4:32294206-32294225 | None:intergenic | 70.0% |
| !! | CTCTGTGCGGGGCTTTGGGG+GGG | - | chr1_4:32294207-32294226 | None:intergenic | 70.0% |
| !! | CCTCTGTGCGGGGCTTTGGG+GGG | - | chr1_4:32294208-32294227 | None:intergenic | 70.0% |
| ! | CCCTCTGTGCGGGGCTTTGG+GGG | - | chr1_4:32294209-32294228 | None:intergenic | 70.0% |
| CCCCCAAAGCCCCGCACAGA+GGG | + | chr1_4:32294206-32294225 | Msa0160240:intron | 70.0% | |
| !! | TGTGCGGGGCTTTGGGGGGG+GGG | - | chr1_4:32294204-32294223 | None:intergenic | 75.0% |
| !! | CTGTGCGGGGCTTTGGGGGG+GGG | - | chr1_4:32294205-32294224 | None:intergenic | 75.0% |
| CCCCCCAAAGCCCCGCACAG+AGG | + | chr1_4:32294205-32294224 | Msa0160240:intron | 75.0% | |
| !!! | TGCGGGGCTTTGGGGGGGGG+GGG | - | chr1_4:32294202-32294221 | None:intergenic | 80.0% |
| !!! | GTGCGGGGCTTTGGGGGGGG+GGG | - | chr1_4:32294203-32294222 | None:intergenic | 80.0% |
| ! | TTTGGGGGGGGGGGGGGGGG+GGG | - | chr1_4:32294194-32294213 | None:intergenic | 85.0% |
| !! | CTTTGGGGGGGGGGGGGGGG+GGG | - | chr1_4:32294195-32294214 | None:intergenic | 85.0% |
| !!! | GCTTTGGGGGGGGGGGGGGG+GGG | - | chr1_4:32294196-32294215 | None:intergenic | 85.0% |
| !!! | GGCTTTGGGGGGGGGGGGGG+GGG | - | chr1_4:32294197-32294216 | None:intergenic | 85.0% |
| !!! | GGGCTTTGGGGGGGGGGGGG+GGG | - | chr1_4:32294198-32294217 | None:intergenic | 85.0% |
| !!! | GGGGCTTTGGGGGGGGGGGG+GGG | - | chr1_4:32294199-32294218 | None:intergenic | 85.0% |
| !!! | CGGGGCTTTGGGGGGGGGGG+GGG | - | chr1_4:32294200-32294219 | None:intergenic | 85.0% |
| !!! | GCGGGGCTTTGGGGGGGGGG+GGG | - | chr1_4:32294201-32294220 | None:intergenic | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | - | chr1_4:32294193-32294212 | None:intergenic | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr1_4:32294192-32294211 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 32292687 | 32298853 | 32292687 | ID=Msa0160240;Name=Msa0160240 |
| chr1_4 | mRNA | 32292687 | 32298853 | 32292687 | ID=Msa0160240-mRNA-1;Parent=Msa0160240;Name=Msa0160240-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.7|0.63|1|1|1|11|201|411 |
| chr1_4 | exon | 32292687 | 32292785 | 32292687 | ID=Msa0160240-mRNA-1:exon:10210;Parent=Msa0160240-mRNA-1 |
| chr1_4 | exon | 32292893 | 32293015 | 32292893 | ID=Msa0160240-mRNA-1:exon:10211;Parent=Msa0160240-mRNA-1 |
| chr1_4 | exon | 32293145 | 32293213 | 32293145 | ID=Msa0160240-mRNA-1:exon:10212;Parent=Msa0160240-mRNA-1 |
| chr1_4 | exon | 32293287 | 32293383 | 32293287 | ID=Msa0160240-mRNA-1:exon:10213;Parent=Msa0160240-mRNA-1 |
| chr1_4 | exon | 32293461 | 32293563 | 32293461 | ID=Msa0160240-mRNA-1:exon:10214;Parent=Msa0160240-mRNA-1 |
| chr1_4 | exon | 32294356 | 32294566 | 32294356 | ID=Msa0160240-mRNA-1:exon:10215;Parent=Msa0160240-mRNA-1 |
| chr1_4 | exon | 32295162 | 32295275 | 32295162 | ID=Msa0160240-mRNA-1:exon:10216;Parent=Msa0160240-mRNA-1 |
| chr1_4 | exon | 32296081 | 32296212 | 32296081 | ID=Msa0160240-mRNA-1:exon:10217;Parent=Msa0160240-mRNA-1 |
| chr1_4 | exon | 32297569 | 32297649 | 32297569 | ID=Msa0160240-mRNA-1:exon:10218;Parent=Msa0160240-mRNA-1 |
| chr1_4 | exon | 32298172 | 32298288 | 32298172 | ID=Msa0160240-mRNA-1:exon:10219;Parent=Msa0160240-mRNA-1 |
| chr1_4 | exon | 32298563 | 32298853 | 32298563 | ID=Msa0160240-mRNA-1:exon:10220;Parent=Msa0160240-mRNA-1 |
| chr1_4 | CDS | 32292687 | 32292785 | 32292687 | ID=Msa0160240-mRNA-1:cds;Parent=Msa0160240-mRNA-1 |
| chr1_4 | CDS | 32292893 | 32293015 | 32292893 | ID=Msa0160240-mRNA-1:cds;Parent=Msa0160240-mRNA-1 |
| chr1_4 | CDS | 32293145 | 32293213 | 32293145 | ID=Msa0160240-mRNA-1:cds;Parent=Msa0160240-mRNA-1 |
| chr1_4 | CDS | 32293287 | 32293383 | 32293287 | ID=Msa0160240-mRNA-1:cds;Parent=Msa0160240-mRNA-1 |
| chr1_4 | CDS | 32293461 | 32293563 | 32293461 | ID=Msa0160240-mRNA-1:cds;Parent=Msa0160240-mRNA-1 |
| chr1_4 | CDS | 32294356 | 32294566 | 32294356 | ID=Msa0160240-mRNA-1:cds;Parent=Msa0160240-mRNA-1 |
| chr1_4 | CDS | 32295162 | 32295275 | 32295162 | ID=Msa0160240-mRNA-1:cds;Parent=Msa0160240-mRNA-1 |
| chr1_4 | CDS | 32296081 | 32296212 | 32296081 | ID=Msa0160240-mRNA-1:cds;Parent=Msa0160240-mRNA-1 |
| chr1_4 | CDS | 32297569 | 32297649 | 32297569 | ID=Msa0160240-mRNA-1:cds;Parent=Msa0160240-mRNA-1 |
| chr1_4 | CDS | 32298172 | 32298288 | 32298172 | ID=Msa0160240-mRNA-1:cds;Parent=Msa0160240-mRNA-1 |
| chr1_4 | CDS | 32298563 | 32298652 | 32298563 | ID=Msa0160240-mRNA-1:cds;Parent=Msa0160240-mRNA-1 |
| chr1_4 | three_prime_UTR | 32298653 | 32298853 | 32298653 | ID=Msa0160240-mRNA-1:three_prime_utr;Parent=Msa0160240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
