AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0417000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0417000 MtrunA17_Chr3g0114241 95.256 780 31 3 1 774 1 780 0.0 1470
Msa0417000 MtrunA17_Chr4g0020011 37.288 295 168 6 421 710 95 377 7.13e-56 196
Msa0417000 MtrunA17_Chr3g0090071 35.315 286 170 5 428 710 114 387 2.82e-49 178
Msa0417000 MtrunA17_Chr4g0039291 34.828 290 176 5 424 710 109 388 1.11e-48 176
Msa0417000 MtrunA17_Chr7g0240091 27.897 233 161 3 479 710 222 448 3.51e-24 106
Msa0417000 MtrunA17_Chr2g0320711 29.352 293 183 8 428 710 157 435 4.99e-22 99.8
Msa0417000 MtrunA17_Chr7g0245261 29.876 241 138 7 476 710 103 318 3.02e-18 87.0
Msa0417000 MtrunA17_Chr7g0245291 27.459 244 152 6 477 717 111 332 9.98e-17 82.4
Msa0417000 MtrunA17_Chr2g0318431 26.693 251 163 5 420 664 173 408 3.25e-16 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0417000 AT3G56140.1 72.414 609 161 4 134 735 125 733 0.0 908
Msa0417000 AT3G56140.3 72.414 609 161 4 134 735 125 733 0.0 908
Msa0417000 AT2G40400.2 66.975 648 179 6 134 774 116 735 0.0 908
Msa0417000 AT2G40400.1 66.975 648 179 6 134 774 116 735 0.0 908
Msa0417000 AT2G40400.3 71.776 535 144 4 134 661 116 650 0.0 820
Msa0417000 AT3G56140.2 73.930 514 133 1 223 735 1 514 0.0 790
Msa0417000 AT5G12470.1 35.739 291 178 5 421 710 101 383 6.68e-52 186
Msa0417000 AT2G37860.3 26.780 295 198 7 423 710 149 432 1.11e-25 111
Msa0417000 AT2G37860.4 26.780 295 198 7 423 710 149 432 1.11e-25 111
Msa0417000 AT5G22790.1 28.125 288 194 7 428 710 154 433 1.67e-25 110
Msa0417000 AT3G08630.1 29.461 241 149 8 477 715 103 324 6.67e-22 98.2
Msa0417000 AT3G08640.1 28.000 250 159 7 477 723 106 337 3.24e-21 96.3
Msa0417000 AT5G24690.1 27.481 262 166 6 420 674 172 416 4.56e-18 89.0
Msa0417000 AT2G37860.2 24.365 197 145 2 428 623 154 347 1.82e-13 73.2
Msa0417000 AT2G37860.1 24.365 197 145 2 428 623 154 347 1.82e-13 73.2

Find 199 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCGAATGAACTGTCTTTC+TGG 0.090777 3_2:-64100646 None:intergenic
TCTTCTTGATACAGGGTTTC+AGG 0.152745 3_2:+64101722 Msa0417000:intron
AATGCTAGAGTTGTTTATTT+AGG 0.154263 3_2:+64098717 Msa0417000:CDS
ATGCTAGAGTTGTTTATTTA+GGG 0.270078 3_2:+64098718 Msa0417000:CDS
CATAAGATTGCAGCTTGATT+TGG 0.278656 3_2:-64104473 None:intergenic
CCAAATCTGTCGTTTCCTTT+TGG 0.305738 3_2:+64100409 Msa0417000:CDS
GCCGGTTCAGGCTTCATATC+AGG 0.318344 3_2:+64100346 Msa0417000:CDS
CATAAGATAGCAGCTTGATT+TGG 0.319979 3_2:-64104389 None:intergenic
CTTCAAAAGGGAATTGATCT+TGG 0.320765 3_2:+64101544 Msa0417000:CDS
CACGGACAATCAATTCTTAC+TGG 0.323981 3_2:+64103205 Msa0417000:CDS
TTCATAACCGTTGCTTCAAC+TGG 0.324330 3_2:-64098573 None:intergenic
TTTCTCATCAACAGATCTTA+AGG 0.326958 3_2:+64100260 Msa0417000:intron
GCATATTTACAAGAAATGTT+TGG 0.329508 3_2:-64103170 None:intergenic
AGAACCCAGTGGGGACAAAT+TGG 0.330231 3_2:+64102034 Msa0417000:CDS
ATCTGCAAATCTCCGTTATC+AGG 0.331816 3_2:+64102263 Msa0417000:CDS
AGTTCTCTAATAGGACTTCT+TGG 0.338841 3_2:+64101985 Msa0417000:CDS
TGCTAGTCTTTGCAAGAACT+TGG 0.340316 3_2:-64101764 None:intergenic
AGAACTCACTCACCGTTTCC+AGG 0.340540 3_2:+64101627 Msa0417000:CDS
CGGCGGTGGAAGATGAGTTT+TGG 0.344399 3_2:-64098307 None:intergenic
CGAATTGCATCAGTTGTATA+TGG 0.351863 3_2:+64102069 Msa0417000:CDS
GACGACAAGGGCGGCGGAGG+AGG 0.358045 3_2:+64098527 Msa0417000:CDS
GAGGTTGACACGGCGGCGTT+TGG 0.363665 3_2:-64098358 None:intergenic
CATATTTACAAGAAATGTTT+GGG 0.367643 3_2:-64103169 None:intergenic
AGGGGAAGCTGAACAAGTTC+CGG 0.369299 3_2:+64098737 Msa0417000:CDS
ATTAGAGAACTAATGTTATC+AGG 0.372366 3_2:-64101973 None:intergenic
ACATATGGAGCTAGAGGAAC+TGG 0.381829 3_2:+64100562 Msa0417000:CDS
CCAAAAGGAAACGACAGATT+TGG 0.382199 3_2:-64100409 None:intergenic
TATGCACCTCCAGCCGGTTC+AGG 0.382397 3_2:+64100334 Msa0417000:CDS
TTTGTTATGCAGATAATTGC+TGG 0.390425 3_2:+64103111 Msa0417000:intron
GATAACATTAGTTCTCTAAT+AGG 0.396181 3_2:+64101976 Msa0417000:CDS
ATCTTACAAAATATGCTTGA+TGG 0.396790 3_2:+64100493 Msa0417000:CDS
AGAGCTTGACTATGTTATTA+CGG 0.398518 3_2:+64101858 Msa0417000:CDS
TTCTCTCTGCGGCGACGACA+AGG 0.400440 3_2:+64098514 Msa0417000:CDS
GCTCGGGTTATGAATGCTGC+TGG 0.402906 3_2:+64100754 Msa0417000:CDS
GTCAAAGCAATTTCTGCTAC+AGG 0.405412 3_2:-64100719 None:intergenic
TGTTTGTTAGTGATGATTGC+TGG 0.407690 3_2:-64102183 None:intergenic
GCAATTTCTGCTACAGGGTC+TGG 0.409182 3_2:-64100713 None:intergenic
ATGCGTTGTATAAGACTTCA+AGG 0.418219 3_2:-64099568 None:intergenic
GTTTGGCGGCGCGGAATTGT+CGG 0.421526 3_2:-64098341 None:intergenic
TTGGCTTCAGGATCTTCAAA+AGG 0.426441 3_2:+64101531 Msa0417000:intron
GTTGGATTTATTTCAAGTAT+TGG 0.430933 3_2:+64102111 Msa0417000:CDS
AGATATGAGCTTGGACCAAA+AGG 0.431226 3_2:-64100424 None:intergenic
AGATTCCAATTTGTCCCCAC+TGG 0.431706 3_2:-64102039 None:intergenic
TCATACTCCTGCCATCGTTC+AGG 0.432726 3_2:-64099597 None:intergenic
TCACGACAGTAACTAAGAAT+AGG 0.433080 3_2:-64099621 None:intergenic
GGCGACGACAAGGGCGGCGG+AGG 0.433973 3_2:+64098524 Msa0417000:CDS
GGCGAATGAACTGTCTTTCT+GGG 0.434604 3_2:-64100645 None:intergenic
GCCCACTAATTCCTTCTGCT+TGG 0.436484 3_2:-64100288 None:intergenic
TTGACCGGGTTGAGATTGCT+CGG 0.437015 3_2:+64100737 Msa0417000:CDS
GGTTCGAGATGATAAAGAAT+TGG 0.438882 3_2:+64098758 Msa0417000:CDS
GAGAAAGAAGCCTGAGCATT+GGG 0.440199 3_2:-64098225 None:intergenic
GTTGTTTCCGTCGTGGTGTT+CGG 0.441955 3_2:-64098403 None:intergenic
GGCGGAGGAGGAGAAGATAA+AGG 0.443539 3_2:+64098539 Msa0417000:CDS
TCTATCTTCTTCACTTCCTC+CGG 0.445590 3_2:-64098597 None:intergenic
CAACCGGCGAGGAGTGTTGA+TGG 0.446976 3_2:+64098461 Msa0417000:CDS
GTTGACACGGCGGCGTTTGG+CGG 0.450660 3_2:-64098355 None:intergenic
CTTAGTTACTGTCGTGAAAA+CGG 0.452155 3_2:+64099627 Msa0417000:CDS
TGAAGCAACGGTTATGAAAC+CGG 0.454037 3_2:+64098578 Msa0417000:CDS
GGTCTAAAACTCGCTGGCGT+TGG 0.455815 3_2:+64102093 Msa0417000:CDS
GCCTGATATGAAGCCTGAAC+CGG 0.457500 3_2:-64100347 None:intergenic
CTTCTTGATACAGGGTTTCA+GGG 0.463114 3_2:+64101723 Msa0417000:intron
GTTCTACAGCACGAAGCAAC+CGG 0.463888 3_2:+64098445 Msa0417000:CDS
GCTCAGGCTTCTTTCTCCAC+AGG 0.465749 3_2:+64098231 Msa0417000:CDS
GGAAAGAGAAAGGGAAAGTG+TGG 0.466655 3_2:+64098682 Msa0417000:CDS
TACGGCGATAGGTGAACCTT+TGG 0.473278 3_2:+64098653 Msa0417000:CDS
GCAGATAATTGCTGGGGTTG+TGG 0.473980 3_2:+64103119 Msa0417000:intron
GTAGCAGAAATTGCTTTGAC+CGG 0.474834 3_2:+64100722 Msa0417000:CDS
GGTGCAAGCCATGTCACATA+TGG 0.477383 3_2:+64100547 Msa0417000:CDS
TAGGTGAACCTTTGGCGATA+GGG 0.483781 3_2:+64098661 Msa0417000:CDS
TTCTCTTTCCCTATCGCCAA+AGG 0.486815 3_2:-64098669 None:intergenic
GGAGAAGATAAAGGAGAATA+CGG 0.489654 3_2:+64098548 Msa0417000:CDS
TGCGGCGACGACAAGGGCGG+CGG 0.490808 3_2:+64098521 Msa0417000:CDS
TGGCTTCAGGATCTTCAAAA+GGG 0.490844 3_2:+64101532 Msa0417000:intron
TTGTTATGCAGATAATTGCT+GGG 0.493083 3_2:+64103112 Msa0417000:intron
GAAGCTCCGGCGGCTAGAAA+CGG 0.494762 3_2:-64098486 None:intergenic
GATTCCAATTTGTCCCCACT+GGG 0.496606 3_2:-64102038 None:intergenic
TGATCTTGGTTTAGTATCAC+CGG 0.498342 3_2:+64101558 Msa0417000:CDS
AATTCTTTATCATCTCGAAC+CGG 0.500639 3_2:-64098756 None:intergenic
GGGTTTCAGGGAAAGATTGT+TGG 0.502306 3_2:+64101735 Msa0417000:intron
GTCCAAGCAGAAGGAATTAG+TGG 0.503501 3_2:+64100286 Msa0417000:CDS
AATACAAATTTACCTGGAAA+CGG 0.504032 3_2:-64101639 None:intergenic
ATGCTTGATGGAGGGGCCAC+CGG 0.507280 3_2:+64100505 Msa0417000:CDS
CTCTAGCTCCATATGTGACA+TGG 0.508607 3_2:-64100555 None:intergenic
ACAAAATATGCTTGATGGAG+GGG 0.508686 3_2:+64100498 Msa0417000:CDS
TTGAAATGCATTGTCAGGGA+TGG 0.509174 3_2:-64102010 None:intergenic
GAAAGTAAGTCACGTGCGGC+GGG 0.513194 3_2:-64098254 None:intergenic
TTGGCGATAGGGAAAGAGAA+AGG 0.514879 3_2:+64098672 Msa0417000:CDS
CAAAATAAACTTGACTGTCA+TGG 0.517867 3_2:+64099528 Msa0417000:CDS
ACGGACAATCAATTCTTACT+GGG 0.519712 3_2:+64103206 Msa0417000:CDS
AGGAATGATAAAGTTGGTGC+AGG 0.519719 3_2:-64101925 None:intergenic
TCTCTCTGCGGCGACGACAA+GGG 0.521240 3_2:+64098515 Msa0417000:CDS
GAATCTGATGTAGGTGGCTC+AGG 0.521983 3_2:-64104365 None:intergenic
CACGGCGGCGTTTGGCGGCG+CGG 0.526669 3_2:-64098350 None:intergenic
GTTCTCTAAATACCTGATAA+CGG 0.527581 3_2:-64102275 None:intergenic
GGAGAAAGAAGCCTGAGCAT+TGG 0.530325 3_2:-64098226 None:intergenic
AGAGAGAAGAAACGAAGCTC+CGG 0.531629 3_2:-64098499 None:intergenic
ATAGGTGAACCTTTGGCGAT+AGG 0.532642 3_2:+64098660 Msa0417000:CDS
GCTAGTCTTTGCAAGAACTT+GGG 0.533750 3_2:-64101763 None:intergenic
GAATCTGATGAAGGTGGCTC+AGG 0.534682 3_2:-64104449 None:intergenic
TAGGAAAGGAATGATAAAGT+TGG 0.537940 3_2:-64101931 None:intergenic
ATAAACTTGACTGTCATGGC+AGG 0.537942 3_2:+64099532 Msa0417000:CDS
CAAAGACTAGCAATAGAAGA+AGG 0.538188 3_2:+64101775 Msa0417000:CDS
ATTGACCTCGCACGCTCTAC+CGG 0.539341 3_2:+64104317 Msa0417000:CDS
GACTGTCATGGCAGGATGGA+TGG 0.539731 3_2:+64099540 Msa0417000:CDS
TTGGCCGCCTGAACGATGGC+AGG 0.541105 3_2:+64099590 Msa0417000:CDS
ATGGCACCGTTTCTAGCCGC+CGG 0.542710 3_2:+64098480 Msa0417000:CDS
ATATACGATGCTACGGCGAT+AGG 0.545909 3_2:+64098642 Msa0417000:CDS
TCTTAGCTGCGTTGATGGAG+AGG 0.545982 3_2:-64098377 None:intergenic
TTGCTGGGGTTGTGGAGCAT+CGG 0.546344 3_2:+64103127 Msa0417000:CDS
GGAAGGTACGGCACGTGAGA+CGG 0.547035 3_2:-64098286 None:intergenic
CGCATTGGCCGCCTGAACGA+TGG 0.549145 3_2:+64099586 Msa0417000:CDS
TGAAGGTGGCTCAGGTGACT+CGG 0.549801 3_2:-64104441 None:intergenic
TGAATGCTGCTGGGCAGAGA+CGG 0.550691 3_2:+64100764 Msa0417000:CDS
GATGAGATTAAAAGCGAATG+AGG 0.553911 3_2:+64104521 Msa0417000:CDS
TTAAGGACTGTCCAAGCAGA+AGG 0.554027 3_2:+64100277 Msa0417000:CDS
GAATGCTGCTGGGCAGAGAC+GGG 0.554415 3_2:+64100765 Msa0417000:CDS
GAGACGGGATGCCCTCCCAC+AGG 0.554747 3_2:+64100780 Msa0417000:CDS
AAATTATATGCACCTCCAGC+CGG 0.558669 3_2:+64100328 Msa0417000:CDS
AGTCACGTGCGGCGGGCCTG+TGG 0.560414 3_2:-64098247 None:intergenic
TGACCGGGTTGAGATTGCTC+GGG 0.562769 3_2:+64100738 Msa0417000:CDS
TACAAAATATGCTTGATGGA+GGG 0.564237 3_2:+64100497 Msa0417000:CDS
CATATGGAGCTAGAGGAACT+GGG 0.567576 3_2:+64100563 Msa0417000:CDS
GGAATCCGTCTTGTTGCTTG+TGG 0.568003 3_2:+64099648 Msa0417000:CDS
GAAAGAGAAAGGGAAAGTGT+GGG 0.568024 3_2:+64098683 Msa0417000:CDS
AAGAAGTTCTGCAATACCTC+CGG 0.571472 3_2:-64101577 None:intergenic
CTCGGGTTATGAATGCTGCT+GGG 0.571983 3_2:+64100755 Msa0417000:CDS
AGTCTTTCTAACTTGCAGTC+CGG 0.572641 3_2:-64104336 None:intergenic
TTACAAAATATGCTTGATGG+AGG 0.573219 3_2:+64100496 Msa0417000:CDS
TACTCCTGCCATCGTTCAGG+CGG 0.574643 3_2:-64099594 None:intergenic
TAGCAGAAATTGCTTTGACC+GGG 0.576460 3_2:+64100723 Msa0417000:CDS
AAGCTCATATCTATCTGCAC+AGG 0.578491 3_2:+64100435 Msa0417000:CDS
TGCTTGTGGTACTCCACTGA+AGG 0.579264 3_2:+64099662 Msa0417000:CDS
GGTCTTTGTAACTTGCAGTC+CGG 0.579868 3_2:-64104420 None:intergenic
AAATTTGAACATACCTTCAG+TGG 0.581152 3_2:-64099675 None:intergenic
AGACAGTTCATTCGCCGTGA+GGG 0.581170 3_2:+64100652 Msa0417000:CDS
TGATTTGGAGAATCTGATGT+AGG 0.581495 3_2:-64104374 None:intergenic
TGGCGATAGGGAAAGAGAAA+GGG 0.582792 3_2:+64098673 Msa0417000:CDS
GGAGGAAGTGAAGAAGATAG+AGG 0.583668 3_2:+64098599 Msa0417000:CDS
AGGAATTAGTGGGCTAACAA+AGG 0.584204 3_2:+64100297 Msa0417000:CDS
TGAAAGTAAGTCACGTGCGG+CGG 0.586751 3_2:-64098255 None:intergenic
TGAAGTCTTATACAACGCAT+TGG 0.586922 3_2:+64099571 Msa0417000:CDS
TGATTTGGAGAATCTGATGA+AGG 0.587198 3_2:-64104458 None:intergenic
GAACACCACGACGGAAACAA+CGG 0.587520 3_2:+64098405 Msa0417000:CDS
TATGGTGGTCTAAAACTCGC+TGG 0.589563 3_2:+64102087 Msa0417000:CDS
GCTATCTTATGCAACTCTAC+CGG 0.590768 3_2:+64104401 Msa0417000:CDS
ATCGAGGATATACGATGCTA+CGG 0.591448 3_2:+64098635 Msa0417000:CDS
TCTATCTGCACAGGCTAGAG+TGG 0.591577 3_2:+64100444 Msa0417000:CDS
GATATGAAGCCTGAACCGGC+TGG 0.591682 3_2:-64100343 None:intergenic
TGTGCAGATAGATATGAGCT+TGG 0.597352 3_2:-64100433 None:intergenic
CGCAATTGACTCATCAGCAT+AGG 0.597542 3_2:-64101950 None:intergenic
GCATTTCAAAAGAACCCAGT+GGG 0.600369 3_2:+64102024 Msa0417000:CDS
TTGACTCATCAGCATAGGAA+AGG 0.600777 3_2:-64101945 None:intergenic
TCACTAACAAACAGATTGCA+AGG 0.600933 3_2:+64102193 Msa0417000:CDS
CATGTCACATATGGAGCTAG+AGG 0.602908 3_2:+64100556 Msa0417000:CDS
CAATTCTTACTGGGGAACGC+AGG 0.606143 3_2:+64103215 Msa0417000:CDS
TCAAAGCAATTTCTGCTACA+GGG 0.606508 3_2:-64100718 None:intergenic
TGCTAGAGTTGTTTATTTAG+GGG 0.610896 3_2:+64098719 Msa0417000:CDS
TTGTTGATTTCTTCACAGTG+TGG 0.614872 3_2:+64101899 Msa0417000:CDS
GCAGTCCGGTAGAGCGTGCG+AGG 0.617626 3_2:-64104322 None:intergenic
TACGGCGCCAGTTGAAGCAA+CGG 0.619944 3_2:+64098566 Msa0417000:CDS
CGACGCCGTTGTTTCCGTCG+TGG 0.620705 3_2:-64098410 None:intergenic
GTGCCATCAACACTCCTCGC+CGG 0.627563 3_2:-64098464 None:intergenic
GGAAGTGAAGAAGATAGAGG+AGG 0.629985 3_2:+64098602 Msa0417000:CDS
ACTTGACTGTCATGGCAGGA+TGG 0.634290 3_2:+64099536 Msa0417000:CDS
AGTCACAACTATCAACATAC+CGG 0.634556 3_2:-64100524 None:intergenic
CTCTGCGGCGACGACAAGGG+CGG 0.639690 3_2:+64098518 Msa0417000:CDS
ATTGCATCAGTTGTATATGG+TGG 0.640328 3_2:+64102072 Msa0417000:CDS
GAGAAGAAACGAAGCTCCGG+CGG 0.642554 3_2:-64098496 None:intergenic
TATTAGCACAGTATCAGAAG+CGG 0.643218 3_2:+64101818 Msa0417000:CDS
AAGAAAACCGAACACCACGA+CGG 0.643908 3_2:+64098396 Msa0417000:CDS
TGGCCAACTAACCTGTGGGA+GGG 0.648648 3_2:-64100791 None:intergenic
TAACCCGAGCAATCTCAACC+CGG 0.649576 3_2:-64100741 None:intergenic
TCCAAGCAGAAGGAATTAGT+GGG 0.651684 3_2:+64100287 Msa0417000:CDS
ATGGCCAACTAACCTGTGGG+AGG 0.651841 3_2:-64100792 None:intergenic
GTTATTACGGACACTGTCAG+AGG 0.660546 3_2:+64101871 Msa0417000:CDS
TGTTATGCAGATAATTGCTG+GGG 0.662537 3_2:+64103113 Msa0417000:intron
CGTTGATGGAGAGGTTGACA+CGG 0.667477 3_2:-64098368 None:intergenic
GGTATGTTGATAGTTGTGAC+TGG 0.667974 3_2:+64100526 Msa0417000:CDS
CGGCACGTGAGACGGTTACG+CGG 0.668728 3_2:-64098278 None:intergenic
GAGTACCACAAGCAACAAGA+CGG 0.670544 3_2:-64099653 None:intergenic
AAGACAGTTCATTCGCCGTG+AGG 0.674905 3_2:+64100651 Msa0417000:CDS
TTTGGAGAATCTGATGTAGG+TGG 0.683114 3_2:-64104371 None:intergenic
CGGACAATCAATTCTTACTG+GGG 0.691240 3_2:+64103207 Msa0417000:CDS
CACAACTATCAACATACCGG+TGG 0.692061 3_2:-64100521 None:intergenic
CAACAGGAACTTCTCCCTCA+CGG 0.692731 3_2:-64100666 None:intergenic
CGGTGAAAGTAAGTCACGTG+CGG 0.694390 3_2:-64098258 None:intergenic
ATATGGAGCTAGAGGAACTG+GGG 0.700000 3_2:+64100564 Msa0417000:CDS
TCTTGGTTTAGTATCACCGG+AGG 0.703286 3_2:+64101561 Msa0417000:CDS
ATGAAGCCTGAACCGGCTGG+AGG 0.705896 3_2:-64100340 None:intergenic
TTTGGAGAATCTGATGAAGG+TGG 0.706792 3_2:-64104455 None:intergenic
TGCATTTCAAAAGAACCCAG+TGG 0.707372 3_2:+64102023 Msa0417000:CDS
AGCTTCGTTTCTTCTCTCTG+CGG 0.712622 3_2:+64098503 Msa0417000:CDS
ATTTCTGCTACAGGGTCTGG+CGG 0.715985 3_2:-64100710 None:intergenic
ACAGCACGAAGCAACCGGCG+AGG 0.730554 3_2:+64098450 Msa0417000:CDS
TGATGGAGAGGTTGACACGG+CGG 0.731595 3_2:-64098365 None:intergenic
AGGAGGAAGTGATAACATCG+AGG 0.747187 3_2:+64098619 Msa0417000:CDS
TGAGTGAGTTCTGAAAGCAG+AGG 0.753513 3_2:-64101616 None:intergenic
CATTTCAAAAGAACCCAGTG+GGG 0.761830 3_2:+64102025 Msa0417000:CDS
AGCAACGGTTATGAAACCGG+AGG 0.762047 3_2:+64098581 Msa0417000:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAGTTTTTTAGTTTTTTT+TGG + chr3_2:64099375-64099394 Msa0417000:intron 10.0%
!!! ATTTTTCAAATCTAATTTTT+TGG + chr3_2:64104275-64104294 Msa0417000:intron 10.0%
!! AGTTTATGAAAAATAACTTA+TGG - chr3_2:64099067-64099086 None:intergenic 15.0%
!!! TTAAAATTTTAAAATCCTTG+TGG - chr3_2:64099879-64099898 None:intergenic 15.0%
!!! TTCAATGTTTTAAATTTGTT+GGG + chr3_2:64100106-64100125 Msa0417000:intron 15.0%
!!! CAATTTTTAAATATCATCTT+TGG - chr3_2:64100235-64100254 None:intergenic 15.0%
!! CAGAAAAAATAATTCATAAA+AGG - chr3_2:64100963-64100982 None:intergenic 15.0%
!!! TTATGAATTATTTTTTCTGT+AGG + chr3_2:64100964-64100983 Msa0417000:intron 15.0%
!! TATGGAATAAACAATTAAAA+AGG + chr3_2:64103595-64103614 Msa0417000:intron 15.0%
!! GGTTATTTAAATTTAATACA+TGG + chr3_2:64103751-64103770 Msa0417000:intron 15.0%
!! ATATACAAATTTCTCATTAA+AGG + chr3_2:64104008-64104027 Msa0417000:intron 15.0%
!!! TTGGATAAACACTTTATTTA+CGG - chr3_2:64098997-64099016 None:intergenic 20.0%
!! ACTTAATAAGCACTTAATTA+AGG - chr3_2:64099026-64099045 None:intergenic 20.0%
!!! AATTTATGTTTCTTTTACCT+TGG + chr3_2:64099434-64099453 Msa0417000:intron 20.0%
!! AAAAACCTAATCTATGAATT+AGG + chr3_2:64099920-64099939 Msa0417000:intron 20.0%
!! AAAAACCTAATTCATAGATT+AGG - chr3_2:64099928-64099947 None:intergenic 20.0%
!!! TAGGTTTTTCATAATATTTG+AGG + chr3_2:64099939-64099958 Msa0417000:intron 20.0%
!!! GTTCAATGTTTTAAATTTGT+TGG + chr3_2:64100105-64100124 Msa0417000:intron 20.0%
!!! TTTTTCTTTTCCTTAAATGT+TGG + chr3_2:64101127-64101146 Msa0417000:intron 20.0%
!! TAAAGGATGATTACATTAAA+GGG - chr3_2:64101461-64101480 None:intergenic 20.0%
!!! AACATGATTATATTTCCTTT+TGG + chr3_2:64101512-64101531 Msa0417000:intron 20.0%
!! TCAAAAAATACAAATTTACC+TGG - chr3_2:64101648-64101667 None:intergenic 20.0%
!!! GCATTTTTCCTTTAAATTAT+TGG - chr3_2:64102572-64102591 None:intergenic 20.0%
!! TATTATTGCTGAATTTAATG+TGG + chr3_2:64102630-64102649 Msa0417000:intron 20.0%
!! ATTATTGCTGAATTTAATGT+GGG + chr3_2:64102631-64102650 Msa0417000:intron 20.0%
!!! CTAAGACACTTTTTATTATT+GGG - chr3_2:64102733-64102752 None:intergenic 20.0%
!!! TCTAAGACACTTTTTATTAT+TGG - chr3_2:64102734-64102753 None:intergenic 20.0%
!! CATATTTACAAGAAATGTTT+GGG - chr3_2:64103172-64103191 None:intergenic 20.0%
!! AAGTACAACAAATTATACAT+TGG + chr3_2:64103628-64103647 Msa0417000:intron 20.0%
!! AGTACAACAAATTATACATT+GGG + chr3_2:64103629-64103648 Msa0417000:intron 20.0%
!!! TGCTTACTATTAATTTTTCA+AGG + chr3_2:64103893-64103912 Msa0417000:intron 20.0%
!! ATGAGAAATTTGTATATGAA+AGG - chr3_2:64104005-64104024 None:intergenic 20.0%
!! CTCTAAGTTAAAATTTAACA+TGG - chr3_2:64104034-64104053 None:intergenic 20.0%
!! AAATTACTTATCAAACTTAC+AGG - chr3_2:64104149-64104168 None:intergenic 20.0%
! AATGCTAGAGTTGTTTATTT+AGG + chr3_2:64098717-64098736 Msa0417000:CDS 25.0%
! ATGCTAGAGTTGTTTATTTA+GGG + chr3_2:64098718-64098737 Msa0417000:CDS 25.0%
!! TTATCCATATACTGATTAAG+TGG - chr3_2:64098879-64098898 None:intergenic 25.0%
! AACAAAAATCGAAATTCTCA+AGG - chr3_2:64099345-64099364 None:intergenic 25.0%
! TCTAGCAATGACAAAAATAT+AGG - chr3_2:64099483-64099502 None:intergenic 25.0%
!!! CATTATCTTCTGAAATTTTC+TGG + chr3_2:64099730-64099749 Msa0417000:intron 25.0%
! AGATCAGATAATATGTTGAA+AGG + chr3_2:64100039-64100058 Msa0417000:intron 25.0%
! GATCAGATAATATGTTGAAA+GGG + chr3_2:64100040-64100059 Msa0417000:intron 25.0%
!! AATTTAAAACATTGAACGCA+AGG - chr3_2:64100102-64100121 None:intergenic 25.0%
!! ATCAAGCATATTTTGTAAGA+TGG - chr3_2:64100494-64100513 None:intergenic 25.0%
! ATCTTACAAAATATGCTTGA+TGG + chr3_2:64100493-64100512 Msa0417000:CDS 25.0%
!! AATTTTCTTGATATTCTTGC+AGG - chr3_2:64100592-64100611 None:intergenic 25.0%
!! CAATTTTGTATCACCAAAAT+GGG - chr3_2:64100903-64100922 None:intergenic 25.0%
!! TCAATTTTGTATCACCAAAA+TGG - chr3_2:64100904-64100923 None:intergenic 25.0%
! AAACAGAAACATCAAGTAAA+AGG - chr3_2:64101022-64101041 None:intergenic 25.0%
!!! TTTTACTTGATGTTTCTGTT+TGG + chr3_2:64101021-64101040 Msa0417000:intron 25.0%
!!! GTAACTTGTGTTAAACTTTT+GGG + chr3_2:64101213-64101232 Msa0417000:intron 25.0%
! CTAAAGGATGATTACATTAA+AGG - chr3_2:64101462-64101481 None:intergenic 25.0%
! AATACAAATTTACCTGGAAA+CGG - chr3_2:64101642-64101661 None:intergenic 25.0%
! ATTAGAGAACTAATGTTATC+AGG - chr3_2:64101976-64101995 None:intergenic 25.0%
!! GATAACATTAGTTCTCTAAT+AGG + chr3_2:64101976-64101995 Msa0417000:CDS 25.0%
!! GTTGGATTTATTTCAAGTAT+TGG + chr3_2:64102111-64102130 Msa0417000:CDS 25.0%
! AAAAAGACGTAAAAGAAGAT+TGG + chr3_2:64102330-64102349 Msa0417000:intron 25.0%
!!! CAACTAGTTTTTAAAGATAC+AGG - chr3_2:64102529-64102548 None:intergenic 25.0%
!! GTATCTTTAAAAACTAGTTG+TGG + chr3_2:64102529-64102548 Msa0417000:intron 25.0%
! ATGACTCACCAATAATTTAA+AGG + chr3_2:64102561-64102580 Msa0417000:intron 25.0%
!! ATTTGAGGATATTTTCTTTC+TGG + chr3_2:64102963-64102982 Msa0417000:intron 25.0%
! AACTTCAGTATTAATACAGA+AGG - chr3_2:64103083-64103102 None:intergenic 25.0%
! GCATATTTACAAGAAATGTT+TGG - chr3_2:64103173-64103192 None:intergenic 25.0%
!! ATATGCTATCTTTTGTATCA+CGG + chr3_2:64103187-64103206 Msa0417000:CDS 25.0%
!! TGTTTGAACCCTATAATTTT+CGG + chr3_2:64103329-64103348 Msa0417000:intron 25.0%
! CTTGATATCCGAAAATTATA+GGG - chr3_2:64103340-64103359 None:intergenic 25.0%
! ACTTGATATCCGAAAATTAT+AGG - chr3_2:64103341-64103360 None:intergenic 25.0%
!!! TTTAGTTTTGTGATAGAAAG+AGG + chr3_2:64103490-64103509 Msa0417000:intron 25.0%
!!! TTAGTTTTGTGATAGAAAGA+GGG + chr3_2:64103491-64103510 Msa0417000:intron 25.0%
! GTAGTATGTGAACTTAATAT+TGG + chr3_2:64103536-64103555 Msa0417000:intron 25.0%
! TATGTGAACTTAATATTGGA+AGG + chr3_2:64103540-64103559 Msa0417000:intron 25.0%
! ATGTGAACTTAATATTGGAA+GGG + chr3_2:64103541-64103560 Msa0417000:intron 25.0%
! GTACAACAAATTATACATTG+GGG + chr3_2:64103630-64103649 Msa0417000:intron 25.0%
!!! GTGAAGATTATTTTTTCACT+TGG + chr3_2:64103654-64103673 Msa0417000:intron 25.0%
! GTTAAAGAAGGATTCAAAAA+TGG - chr3_2:64103685-64103704 None:intergenic 25.0%
! ATTAAGGCAATTGTTAAAGA+AGG - chr3_2:64103697-64103716 None:intergenic 25.0%
! TTCTTTAACAATTGCCTTAA+TGG + chr3_2:64103696-64103715 Msa0417000:intron 25.0%
! ATCCTTAAAAAGTGATTTAG+AGG + chr3_2:64103836-64103855 Msa0417000:intron 25.0%
!!! TACCTCTAAATCACTTTTTA+AGG - chr3_2:64103841-64103860 None:intergenic 25.0%
! ATTAAATATTCCCAACTTCA+GGG + chr3_2:64103939-64103958 Msa0417000:intron 25.0%
!! AATAGATGCTCTAAGTTAAA+AGG - chr3_2:64104042-64104061 None:intergenic 25.0%
! TTGACTTTCCTTTAATTGAA+GGG - chr3_2:64104089-64104108 None:intergenic 25.0%
!! ATTGACTTTCCTTTAATTGA+AGG - chr3_2:64104090-64104109 None:intergenic 25.0%
! AATTACGACAATAAAGTTGA+AGG + chr3_2:64104107-64104126 Msa0417000:intron 25.0%
! ATTACGACAATAAAGTTGAA+GGG + chr3_2:64104108-64104127 Msa0417000:intron 25.0%
!! CAAAATAATTCTCTCTTTTG+AGG - chr3_2:64104185-64104204 None:intergenic 25.0%
! AAACCAAGATAAGCATAATT+TGG + chr3_2:64104205-64104224 Msa0417000:intron 25.0%
! AATCCAAATTATGCTTATCT+TGG - chr3_2:64104211-64104230 None:intergenic 25.0%
!!! TATAGGTTCTAAATTTGACT+AGG + chr3_2:64104252-64104271 Msa0417000:intron 25.0%
TGCTAGAGTTGTTTATTTAG+GGG + chr3_2:64098719-64098738 Msa0417000:CDS 30.0%
AATTCTTTATCATCTCGAAC+CGG - chr3_2:64098759-64098778 None:intergenic 30.0%
! TGTTGATAAGCGTTTATCAT+TGG + chr3_2:64098821-64098840 Msa0417000:intron 30.0%
AACTATCTTGATGAGCTTAT+TGG + chr3_2:64099083-64099102 Msa0417000:intron 30.0%
AATACATCAGAAAGAGCTTA+TGG + chr3_2:64099106-64099125 Msa0417000:intron 30.0%
TACTTGAATGTGTTTGAGAA+AGG - chr3_2:64099155-64099174 None:intergenic 30.0%
CAAAATAAACTTGACTGTCA+TGG + chr3_2:64099528-64099547 Msa0417000:CDS 30.0%
AAATTTGAACATACCTTCAG+TGG - chr3_2:64099678-64099697 None:intergenic 30.0%
!!! TATCTTCTGAAATTTTCTGG+TGG + chr3_2:64099733-64099752 Msa0417000:intron 30.0%
TGACTTACCATAGATTCAAA+TGG + chr3_2:64099819-64099838 Msa0417000:intron 30.0%
ATGCTTACCATTTGAATCTA+TGG - chr3_2:64099829-64099848 None:intergenic 30.0%
AGATTAAAGAATAGACCACA+AGG + chr3_2:64099861-64099880 Msa0417000:intron 30.0%
! TTCACCCTTTTGTTAAATTC+GGG - chr3_2:64099967-64099986 None:intergenic 30.0%
! GTTCACCCTTTTGTTAAATT+CGG - chr3_2:64099968-64099987 None:intergenic 30.0%
! CAAAAGGGTGAACATAATTT+TGG + chr3_2:64099975-64099994 Msa0417000:intron 30.0%
GATATTTACCATACTGCATA+AGG - chr3_2:64100008-64100027 None:intergenic 30.0%
TTTCTCATCAACAGATCTTA+AGG + chr3_2:64100260-64100279 Msa0417000:intron 30.0%
! CATATTTTGTAAGATGGTCT+GGG - chr3_2:64100488-64100507 None:intergenic 30.0%
TTACAAAATATGCTTGATGG+AGG + chr3_2:64100496-64100515 Msa0417000:CDS 30.0%
TACAAAATATGCTTGATGGA+GGG + chr3_2:64100497-64100516 Msa0417000:CDS 30.0%
AAGCTAATAAGTGATCGAAA+TGG - chr3_2:64100814-64100833 None:intergenic 30.0%
TAAAGGGCTTAAATTTGGAA+GGG - chr3_2:64100867-64100886 None:intergenic 30.0%
ATAAAGGGCTTAAATTTGGA+AGG - chr3_2:64100868-64100887 None:intergenic 30.0%
TTCTGTAGGCAATATAACTT+TGG + chr3_2:64100978-64100997 Msa0417000:intron 30.0%
AATCTCACTTCCAACATTTA+AGG - chr3_2:64101140-64101159 None:intergenic 30.0%
GCACAACAATATATGATCTA+AGG + chr3_2:64101164-64101183 Msa0417000:intron 30.0%
CAATATATGATCTAAGGACT+TGG + chr3_2:64101170-64101189 Msa0417000:intron 30.0%
! GACTTGGACTTTAAACTTTT+GGG + chr3_2:64101186-64101205 Msa0417000:intron 30.0%
!! GGTAACTTGTGTTAAACTTT+TGG + chr3_2:64101212-64101231 Msa0417000:intron 30.0%
!!! TTGTGTTAAACTTTTGGGAT+GGG + chr3_2:64101218-64101237 Msa0417000:intron 30.0%
!! TACATTGATTCCAAGTGTTT+AGG + chr3_2:64101320-64101339 Msa0417000:intron 30.0%
!! ACATTGATTCCAAGTGTTTA+GGG + chr3_2:64101321-64101340 Msa0417000:intron 30.0%
! CAGTGGTAACTAGTTTAAAT+TGG + chr3_2:64101363-64101382 Msa0417000:intron 30.0%
AAATCTGATGATTAGGTAGT+TGG + chr3_2:64101391-64101410 Msa0417000:intron 30.0%
AATCTGATGATTAGGTAGTT+GGG + chr3_2:64101392-64101411 Msa0417000:intron 30.0%
AATGTAATCATCCTTTAGAC+AGG + chr3_2:64101464-64101483 Msa0417000:intron 30.0%
!!! TTATATTTCCTTTTGGCTTC+AGG + chr3_2:64101519-64101538 Msa0417000:intron 30.0%
TGAGATTATTTCATCACTCT+CGG + chr3_2:64101693-64101712 Msa0417000:intron 30.0%
AGAGCTTGACTATGTTATTA+CGG + chr3_2:64101858-64101877 Msa0417000:CDS 30.0%
TAGGAAAGGAATGATAAAGT+TGG - chr3_2:64101934-64101953 None:intergenic 30.0%
!!! TCTTTTGAAATGCATTGTCA+GGG - chr3_2:64102017-64102036 None:intergenic 30.0%
!!! TTCTTTTGAAATGCATTGTC+AGG - chr3_2:64102018-64102037 None:intergenic 30.0%
!!! GTTGTTTATGCACTTTTTCT+TGG + chr3_2:64102237-64102256 Msa0417000:CDS 30.0%
GTTCTCTAAATACCTGATAA+CGG - chr3_2:64102278-64102297 None:intergenic 30.0%
CTGTGTCAATAATCATATAC+TGG - chr3_2:64102447-64102466 None:intergenic 30.0%
CAGTATATGATTATTGACAC+AGG + chr3_2:64102445-64102464 Msa0417000:intron 30.0%
! ACAGGACAAATTTTGCAATT+TGG + chr3_2:64102463-64102482 Msa0417000:intron 30.0%
GCAACCAAAAATTCCAATTT+AGG + chr3_2:64103046-64103065 Msa0417000:intron 30.0%
! CAGACCTAAATTGGAATTTT+TGG - chr3_2:64103053-64103072 None:intergenic 30.0%
! TTTGTTATGCAGATAATTGC+TGG + chr3_2:64103111-64103130 Msa0417000:intron 30.0%
TTGTTATGCAGATAATTGCT+GGG + chr3_2:64103112-64103131 Msa0417000:intron 30.0%
TTATAGGGTTCAAACACAAT+CGG - chr3_2:64103325-64103344 None:intergenic 30.0%
CGTTCATATGAAAATGTGTA+TGG + chr3_2:64103412-64103431 Msa0417000:intron 30.0%
TCATATGAAAATGTGTATGG+TGG + chr3_2:64103415-64103434 Msa0417000:intron 30.0%
!!! TAGTTTTGTGATAGAAAGAG+GGG + chr3_2:64103492-64103511 Msa0417000:intron 30.0%
ATTCCATAACAAGATCTCTT+AGG - chr3_2:64103583-64103602 None:intergenic 30.0%
TTTATCTTCGGTTTCAACAT+AGG + chr3_2:64103730-64103749 Msa0417000:intron 30.0%
CATTAAATATTCCCAACTTC+AGG + chr3_2:64103938-64103957 Msa0417000:intron 30.0%
! TATATGAAAGGTGATAGTGT+TGG - chr3_2:64103993-64104012 None:intergenic 30.0%
ATCTATTCCCCTTCAATTAA+AGG + chr3_2:64104078-64104097 Msa0417000:intron 30.0%
TGACTTTCCTTTAATTGAAG+GGG - chr3_2:64104088-64104107 None:intergenic 30.0%
TTAATCATTCATCTGCGTAT+AGG + chr3_2:64104235-64104254 Msa0417000:intron 30.0%
!!! AAGATGAGTTTTGGAAGGTA+CGG - chr3_2:64098301-64098320 None:intergenic 35.0%
! AATTGTCGGAGTTTTTCGTT+CGG - chr3_2:64098330-64098349 None:intergenic 35.0%
GGAGAAGATAAAGGAGAATA+CGG + chr3_2:64098548-64098567 Msa0417000:CDS 35.0%
GGTTCGAGATGATAAAGAAT+TGG + chr3_2:64098758-64098777 Msa0417000:CDS 35.0%
GGAACCACTTAATCAGTATA+TGG + chr3_2:64098872-64098891 Msa0417000:intron 35.0%
CACTTAATTAAGGCTCTTGT+TGG - chr3_2:64099016-64099035 None:intergenic 35.0%
ATGCGTTGTATAAGACTTCA+AGG - chr3_2:64099571-64099590 None:intergenic 35.0%
! TGAAGTCTTATACAACGCAT+TGG + chr3_2:64099571-64099590 Msa0417000:CDS 35.0%
TCACGACAGTAACTAAGAAT+AGG - chr3_2:64099624-64099643 None:intergenic 35.0%
CTTAGTTACTGTCGTGAAAA+CGG + chr3_2:64099627-64099646 Msa0417000:CDS 35.0%
!!! TTCTGAAATTTTCTGGTGGT+GGG + chr3_2:64099737-64099756 Msa0417000:intron 35.0%
AGATTCAAATGGTAAGCATG+TGG + chr3_2:64099830-64099849 Msa0417000:intron 35.0%
AGGTTCCCGAATTTAACAAA+AGG + chr3_2:64099959-64099978 Msa0417000:intron 35.0%
GGTTCCCGAATTTAACAAAA+GGG + chr3_2:64099960-64099979 Msa0417000:intron 35.0%
TATGTTGAAAGGGTGAATGA+TGG + chr3_2:64100050-64100069 Msa0417000:intron 35.0%
TGAATGATGGCAAGAGAATT+AGG + chr3_2:64100063-64100082 Msa0417000:intron 35.0%
! GCATATTTTGTAAGATGGTC+TGG - chr3_2:64100489-64100508 None:intergenic 35.0%
ACAAAATATGCTTGATGGAG+GGG + chr3_2:64100498-64100517 Msa0417000:CDS 35.0%
AGTCACAACTATCAACATAC+CGG - chr3_2:64100527-64100546 None:intergenic 35.0%
!!! TTCCTGTTGCTGATTTTTTG+TGG + chr3_2:64100680-64100699 Msa0417000:CDS 35.0%
TACCACAAAAAATCAGCAAC+AGG - chr3_2:64100685-64100704 None:intergenic 35.0%
TCAAAGCAATTTCTGCTACA+GGG - chr3_2:64100721-64100740 None:intergenic 35.0%
AAAGGGCTTAAATTTGGAAG+GGG - chr3_2:64100866-64100885 None:intergenic 35.0%
GCACATAAAGGGCTTAAATT+TGG - chr3_2:64100872-64100891 None:intergenic 35.0%
TGGTGAAATGTTAATTGACG+TGG + chr3_2:64101041-64101060 Msa0417000:intron 35.0%
! GGACTTGGACTTTAAACTTT+TGG + chr3_2:64101185-64101204 Msa0417000:intron 35.0%
!! TGGACTTTAAACTTTTGGGA+TGG + chr3_2:64101190-64101209 Msa0417000:intron 35.0%
!!! GGACTTTAAACTTTTGGGAT+GGG + chr3_2:64101191-64101210 Msa0417000:intron 35.0%
!! CTTGTGTTAAACTTTTGGGA+TGG + chr3_2:64101217-64101236 Msa0417000:intron 35.0%
!! CATTGATTCCAAGTGTTTAG+GGG + chr3_2:64101322-64101341 Msa0417000:intron 35.0%
! ATTGATTCCAAGTGTTTAGG+GGG + chr3_2:64101323-64101342 Msa0417000:intron 35.0%
AATTATACCCCCTAAACACT+TGG - chr3_2:64101333-64101352 None:intergenic 35.0%
GGTTGCAAAATCTGATGATT+AGG + chr3_2:64101384-64101403 Msa0417000:intron 35.0%
TAATCATCCTTTAGACAGGA+TGG + chr3_2:64101468-64101487 Msa0417000:intron 35.0%
CTTCAAAAGGGAATTGATCT+TGG + chr3_2:64101544-64101563 Msa0417000:CDS 35.0%
TGATCTTGGTTTAGTATCAC+CGG + chr3_2:64101558-64101577 Msa0417000:CDS 35.0%
CAAAGACTAGCAATAGAAGA+AGG + chr3_2:64101775-64101794 Msa0417000:CDS 35.0%
TATTAGCACAGTATCAGAAG+CGG + chr3_2:64101818-64101837 Msa0417000:CDS 35.0%
!! TTGTTGATTTCTTCACAGTG+TGG + chr3_2:64101899-64101918 Msa0417000:CDS 35.0%
AGTTCTCTAATAGGACTTCT+TGG + chr3_2:64101985-64102004 Msa0417000:CDS 35.0%
CGAATTGCATCAGTTGTATA+TGG + chr3_2:64102069-64102088 Msa0417000:CDS 35.0%
ATTGCATCAGTTGTATATGG+TGG + chr3_2:64102072-64102091 Msa0417000:CDS 35.0%
! TGTTTGTTAGTGATGATTGC+TGG - chr3_2:64102186-64102205 None:intergenic 35.0%
TCACTAACAAACAGATTGCA+AGG + chr3_2:64102193-64102212 Msa0417000:CDS 35.0%
!!! ACAACTGCTGTTTTGAGTAT+CGG - chr3_2:64102222-64102241 None:intergenic 35.0%
GTATGTTGACATTTGAAAGC+AGG + chr3_2:64102494-64102513 Msa0417000:intron 35.0%
GTAAACGAGTCTCACAAATA+AGG - chr3_2:64102683-64102702 None:intergenic 35.0%
TTGCAACTTACAATCCTTCA+GGG + chr3_2:64102842-64102861 Msa0417000:intron 35.0%
GTGCAGATGAAGAAATAGAA+AGG - chr3_2:64102925-64102944 None:intergenic 35.0%
TGTTATGCAGATAATTGCTG+GGG + chr3_2:64103113-64103132 Msa0417000:intron 35.0%
ACGGACAATCAATTCTTACT+GGG + chr3_2:64103206-64103225 Msa0417000:CDS 35.0%
TGAACGCTTGATTGTGAAAT+TGG - chr3_2:64103398-64103417 None:intergenic 35.0%
!! TGATAGTGTTGGTGAAATAC+GGG - chr3_2:64103982-64104001 None:intergenic 35.0%
!! GTGATAGTGTTGGTGAAATA+CGG - chr3_2:64103983-64104002 None:intergenic 35.0%
! TGATTTGGAGAATCTGATGT+AGG - chr3_2:64104377-64104396 None:intergenic 35.0%
CATAAGATAGCAGCTTGATT+TGG - chr3_2:64104392-64104411 None:intergenic 35.0%
! TGATTTGGAGAATCTGATGA+AGG - chr3_2:64104461-64104480 None:intergenic 35.0%
CATAAGATTGCAGCTTGATT+TGG - chr3_2:64104476-64104495 None:intergenic 35.0%
TTCATAACCGTTGCTTCAAC+TGG - chr3_2:64098576-64098595 None:intergenic 40.0%
TGAAGCAACGGTTATGAAAC+CGG + chr3_2:64098578-64098597 Msa0417000:CDS 40.0%
TCTATCTTCTTCACTTCCTC+CGG - chr3_2:64098600-64098619 None:intergenic 40.0%
ATCGAGGATATACGATGCTA+CGG + chr3_2:64098635-64098654 Msa0417000:CDS 40.0%
! GAAAGAGAAAGGGAAAGTGT+GGG + chr3_2:64098683-64098702 Msa0417000:CDS 40.0%
CAAGTGACATAGGGTGTATT+TGG - chr3_2:64099320-64099339 None:intergenic 40.0%
! GTTGCTGCTACTTATCTGTT+GGG + chr3_2:64099456-64099475 Msa0417000:intron 40.0%
ATAAACTTGACTGTCATGGC+AGG + chr3_2:64099532-64099551 Msa0417000:CDS 40.0%
!!! CTTCTGAAATTTTCTGGTGG+TGG + chr3_2:64099736-64099755 Msa0417000:intron 40.0%
GAAACTTGCCTTATGCAGTA+TGG + chr3_2:64099997-64100016 Msa0417000:intron 40.0%
!!! GGGTTTTAGACAGAGTTGTA+TGG + chr3_2:64100126-64100145 Msa0417000:intron 40.0%
TAACCAACTTCACACTGATG+AGG + chr3_2:64100172-64100191 Msa0417000:intron 40.0%
! TCTTTGGTGTGACTTGATCT+AGG - chr3_2:64100219-64100238 None:intergenic 40.0%
TCCAAGCAGAAGGAATTAGT+GGG + chr3_2:64100287-64100306 Msa0417000:CDS 40.0%
!! AGGAATTAGTGGGCTAACAA+AGG + chr3_2:64100297-64100316 Msa0417000:CDS 40.0%
AAATTATATGCACCTCCAGC+CGG + chr3_2:64100328-64100347 Msa0417000:CDS 40.0%
CCAAAAGGAAACGACAGATT+TGG - chr3_2:64100412-64100431 None:intergenic 40.0%
!! CCAAATCTGTCGTTTCCTTT+TGG + chr3_2:64100409-64100428 Msa0417000:CDS 40.0%
AGATATGAGCTTGGACCAAA+AGG - chr3_2:64100427-64100446 None:intergenic 40.0%
TGTGCAGATAGATATGAGCT+TGG - chr3_2:64100436-64100455 None:intergenic 40.0%
AAGCTCATATCTATCTGCAC+AGG + chr3_2:64100435-64100454 Msa0417000:CDS 40.0%
!! GGTATGTTGATAGTTGTGAC+TGG + chr3_2:64100526-64100545 Msa0417000:CDS 40.0%
GTCAAAGCAATTTCTGCTAC+AGG - chr3_2:64100722-64100741 None:intergenic 40.0%
GTAGCAGAAATTGCTTTGAC+CGG + chr3_2:64100722-64100741 Msa0417000:CDS 40.0%
TAGCAGAAATTGCTTTGACC+GGG + chr3_2:64100723-64100742 Msa0417000:CDS 40.0%
AAGGGCTTAAATTTGGAAGG+GGG - chr3_2:64100865-64100884 None:intergenic 40.0%
!! AGGCACTGATACAAGATACA+TGG - chr3_2:64100943-64100962 None:intergenic 40.0%
AGGATGGTGTCTGCTATTAT+TGG + chr3_2:64101484-64101503 Msa0417000:intron 40.0%
TTGAAGATCCTGAAGCCAAA+AGG - chr3_2:64101530-64101549 None:intergenic 40.0%
TTGGCTTCAGGATCTTCAAA+AGG + chr3_2:64101531-64101550 Msa0417000:intron 40.0%
TGGCTTCAGGATCTTCAAAA+GGG + chr3_2:64101532-64101551 Msa0417000:intron 40.0%
AAGAAGTTCTGCAATACCTC+CGG - chr3_2:64101580-64101599 None:intergenic 40.0%
TTATTTCATCACTCTCGGTC+TGG + chr3_2:64101698-64101717 Msa0417000:intron 40.0%
!! GTCTGGTTCTTCTTGATACA+GGG + chr3_2:64101715-64101734 Msa0417000:intron 40.0%
TCTTCTTGATACAGGGTTTC+AGG + chr3_2:64101722-64101741 Msa0417000:intron 40.0%
CTTCTTGATACAGGGTTTCA+GGG + chr3_2:64101723-64101742 Msa0417000:intron 40.0%
!! GCTAGTCTTTGCAAGAACTT+GGG - chr3_2:64101766-64101785 None:intergenic 40.0%
!! TGCTAGTCTTTGCAAGAACT+TGG - chr3_2:64101767-64101786 None:intergenic 40.0%
!! AGGAATGATAAAGTTGGTGC+AGG - chr3_2:64101928-64101947 None:intergenic 40.0%
TTGACTCATCAGCATAGGAA+AGG - chr3_2:64101948-64101967 None:intergenic 40.0%
TTGAAATGCATTGTCAGGGA+TGG - chr3_2:64102013-64102032 None:intergenic 40.0%
TGCATTTCAAAAGAACCCAG+TGG + chr3_2:64102023-64102042 Msa0417000:CDS 40.0%
GCATTTCAAAAGAACCCAGT+GGG + chr3_2:64102024-64102043 Msa0417000:CDS 40.0%
CATTTCAAAAGAACCCAGTG+GGG + chr3_2:64102025-64102044 Msa0417000:CDS 40.0%
ATCTGCAAATCTCCGTTATC+AGG + chr3_2:64102263-64102282 Msa0417000:CDS 40.0%
! TGCCATTTCCTACAGAAACT+GGG - chr3_2:64102357-64102376 None:intergenic 40.0%
! ATGCCATTTCCTACAGAAAC+TGG - chr3_2:64102358-64102377 None:intergenic 40.0%
GTTTCTGTAGGAAATGGCAT+CGG + chr3_2:64102358-64102377 Msa0417000:intron 40.0%
! CATCGGCATTATCTAGTTCA+TGG + chr3_2:64102375-64102394 Msa0417000:intron 40.0%
GTGGGTCTCACTAAATTATG+CGG + chr3_2:64102649-64102668 Msa0417000:intron 40.0%
TGGGTCTCACTAAATTATGC+GGG + chr3_2:64102650-64102669 Msa0417000:intron 40.0%
TGTGAGACTCGTTTACAAAG+TGG + chr3_2:64102687-64102706 Msa0417000:intron 40.0%
CTGAAGGATTGTAAGTTGCA+AGG - chr3_2:64102843-64102862 None:intergenic 40.0%
CTTGCAACTTACAATCCTTC+AGG + chr3_2:64102841-64102860 Msa0417000:intron 40.0%
GTCTGCTGTGTAGTTATTTG+AGG + chr3_2:64102948-64102967 Msa0417000:intron 40.0%
TTCCAATTTAGGTCTGCAAC+TGG + chr3_2:64103057-64103076 Msa0417000:intron 40.0%
CACGGACAATCAATTCTTAC+TGG + chr3_2:64103205-64103224 Msa0417000:CDS 40.0%
CGGACAATCAATTCTTACTG+GGG + chr3_2:64103207-64103226 Msa0417000:CDS 40.0%
! CAATCGGCTTACTTAAGATG+AGG - chr3_2:64103309-64103328 None:intergenic 40.0%
TTGGAAGCTTCGCTAACAAT+AGG - chr3_2:64103379-64103398 None:intergenic 40.0%
! TGAAAATGTGTATGGTGGAG+TGG + chr3_2:64103420-64103439 Msa0417000:intron 40.0%
AAAGAGGGGAAATTCACTTC+TGG + chr3_2:64103506-64103525 Msa0417000:intron 40.0%
CGTCCTAAGAGATCTTGTTA+TGG + chr3_2:64103577-64103596 Msa0417000:intron 40.0%
TAACAATTGCCTTAATGGCC+AGG + chr3_2:64103701-64103720 Msa0417000:intron 40.0%
TTCCCAACTTCAGGGAAATA+TGG + chr3_2:64103947-64103966 Msa0417000:intron 40.0%
GTCCATATTTCCCTGAAGTT+GGG - chr3_2:64103952-64103971 None:intergenic 40.0%
AGTCCATATTTCCCTGAAGT+TGG - chr3_2:64103953-64103972 None:intergenic 40.0%
TTGGTAAATTGCTGCAGCAA+TGG + chr3_2:64104294-64104313 Msa0417000:intron 40.0%
! AGTCTTTCTAACTTGCAGTC+CGG - chr3_2:64104339-64104358 None:intergenic 40.0%
TTTGGAGAATCTGATGTAGG+TGG - chr3_2:64104374-64104393 None:intergenic 40.0%
GCTATCTTATGCAACTCTAC+CGG + chr3_2:64104401-64104420 Msa0417000:CDS 40.0%
TTTGGAGAATCTGATGAAGG+TGG - chr3_2:64104458-64104477 None:intergenic 40.0%
! GCTTTTAATCTCATCGATGC+TGG - chr3_2:64104516-64104535 None:intergenic 40.0%
GAGAAAGAAGCCTGAGCATT+GGG - chr3_2:64098228-64098247 None:intergenic 45.0%
!!! GGTGGAAGATGAGTTTTGGA+AGG - chr3_2:64098306-64098325 None:intergenic 45.0%
! GGTTTTCTTAGCTGCGTTGA+TGG - chr3_2:64098385-64098404 None:intergenic 45.0%
AAGAAAACCGAACACCACGA+CGG + chr3_2:64098396-64098415 Msa0417000:CDS 45.0%
AGAGAGAAGAAACGAAGCTC+CGG - chr3_2:64098502-64098521 None:intergenic 45.0%
AGCTTCGTTTCTTCTCTCTG+CGG + chr3_2:64098503-64098522 Msa0417000:CDS 45.0%
GGAGGAAGTGAAGAAGATAG+AGG + chr3_2:64098599-64098618 Msa0417000:CDS 45.0%
GGAAGTGAAGAAGATAGAGG+AGG + chr3_2:64098602-64098621 Msa0417000:CDS 45.0%
AGGAGGAAGTGATAACATCG+AGG + chr3_2:64098619-64098638 Msa0417000:CDS 45.0%
ATATACGATGCTACGGCGAT+AGG + chr3_2:64098642-64098661 Msa0417000:CDS 45.0%
ATAGGTGAACCTTTGGCGAT+AGG + chr3_2:64098660-64098679 Msa0417000:CDS 45.0%
TAGGTGAACCTTTGGCGATA+GGG + chr3_2:64098661-64098680 Msa0417000:CDS 45.0%
TTCTCTTTCCCTATCGCCAA+AGG - chr3_2:64098672-64098691 None:intergenic 45.0%
TTGGCGATAGGGAAAGAGAA+AGG + chr3_2:64098672-64098691 Msa0417000:CDS 45.0%
TGGCGATAGGGAAAGAGAAA+GGG + chr3_2:64098673-64098692 Msa0417000:CDS 45.0%
GGAAAGAGAAAGGGAAAGTG+TGG + chr3_2:64098682-64098701 Msa0417000:CDS 45.0%
! AGCTTTTCCTGCTGATCTTC+AGG + chr3_2:64098851-64098870 Msa0417000:intron 45.0%
CAGATAAGTAGCAGCAACCA+AGG - chr3_2:64099454-64099473 None:intergenic 45.0%
! GGTTGCTGCTACTTATCTGT+TGG + chr3_2:64099455-64099474 Msa0417000:intron 45.0%
GAGTACCACAAGCAACAAGA+CGG - chr3_2:64099656-64099675 None:intergenic 45.0%
!! TTTCTGGTGGTGGGTTAATC+AGG + chr3_2:64099746-64099765 Msa0417000:intron 45.0%
GATCCTCATCAGTGTGAAGT+TGG - chr3_2:64100178-64100197 None:intergenic 45.0%
TTAAGGACTGTCCAAGCAGA+AGG + chr3_2:64100277-64100296 Msa0417000:CDS 45.0%
GTCCAAGCAGAAGGAATTAG+TGG + chr3_2:64100286-64100305 Msa0417000:CDS 45.0%
CACAACTATCAACATACCGG+TGG - chr3_2:64100524-64100543 None:intergenic 45.0%
! CTCTAGCTCCATATGTGACA+TGG - chr3_2:64100558-64100577 None:intergenic 45.0%
CATGTCACATATGGAGCTAG+AGG + chr3_2:64100556-64100575 Msa0417000:CDS 45.0%
ACATATGGAGCTAGAGGAAC+TGG + chr3_2:64100562-64100581 Msa0417000:CDS 45.0%
CATATGGAGCTAGAGGAACT+GGG + chr3_2:64100563-64100582 Msa0417000:CDS 45.0%
ATATGGAGCTAGAGGAACTG+GGG + chr3_2:64100564-64100583 Msa0417000:CDS 45.0%
GGCGAATGAACTGTCTTTCT+GGG - chr3_2:64100648-64100667 None:intergenic 45.0%
GAAATGGCCAACTAACCTGT+GGG - chr3_2:64100798-64100817 None:intergenic 45.0%
! GGGCAATGAGAGCACATAAA+GGG - chr3_2:64100883-64100902 None:intergenic 45.0%
! TGGGCAATGAGAGCACATAA+AGG - chr3_2:64100884-64100903 None:intergenic 45.0%
! TGTGCTCTCATTGCCCATTT+TGG + chr3_2:64100887-64100906 Msa0417000:intron 45.0%
AATCTTCACGACAGCAGGTT+GGG - chr3_2:64101076-64101095 None:intergenic 45.0%
AAATCTTCACGACAGCAGGT+TGG - chr3_2:64101077-64101096 None:intergenic 45.0%
GTACAAATCTTCACGACAGC+AGG - chr3_2:64101081-64101100 None:intergenic 45.0%
! AGGGGGTATAATTGAGCCAT+CGG + chr3_2:64101340-64101359 Msa0417000:intron 45.0%
TATAATTGAGCCATCGGCAG+TGG + chr3_2:64101346-64101365 Msa0417000:intron 45.0%
AAACTAGTTACCACTGCCGA+TGG - chr3_2:64101359-64101378 None:intergenic 45.0%
TCTTGGTTTAGTATCACCGG+AGG + chr3_2:64101561-64101580 Msa0417000:CDS 45.0%
!! TGAGTGAGTTCTGAAAGCAG+AGG - chr3_2:64101619-64101638 None:intergenic 45.0%
!! GGTCTGGTTCTTCTTGATAC+AGG + chr3_2:64101714-64101733 Msa0417000:intron 45.0%
GGGTTTCAGGGAAAGATTGT+TGG + chr3_2:64101735-64101754 Msa0417000:intron 45.0%
GTTATTACGGACACTGTCAG+AGG + chr3_2:64101871-64101890 Msa0417000:CDS 45.0%
! CGCAATTGACTCATCAGCAT+AGG - chr3_2:64101953-64101972 None:intergenic 45.0%
GATTCCAATTTGTCCCCACT+GGG - chr3_2:64102041-64102060 None:intergenic 45.0%
AGATTCCAATTTGTCCCCAC+TGG - chr3_2:64102042-64102061 None:intergenic 45.0%
! TATGGTGGTCTAAAACTCGC+TGG + chr3_2:64102087-64102106 Msa0417000:CDS 45.0%
AGATTGGACCCAGTTTCTGT+AGG + chr3_2:64102346-64102365 Msa0417000:intron 45.0%
GACCCAGTTTCTGTAGGAAA+TGG + chr3_2:64102352-64102371 Msa0417000:intron 45.0%
TCTTAGGACGCTCTTAGACA+AGG - chr3_2:64103567-64103586 None:intergenic 45.0%
AATTGCCTTAATGGCCAGGT+TGG + chr3_2:64103705-64103724 Msa0417000:intron 45.0%
AAATGCCAACCTGGCCATTA+AGG - chr3_2:64103713-64103732 None:intergenic 45.0%
! GCCAGGTTGGCATTTATCTT+CGG + chr3_2:64103718-64103737 Msa0417000:intron 45.0%
ACCGAAGATAAATGCCAACC+TGG - chr3_2:64103722-64103741 None:intergenic 45.0%
! GGTCTTTGTAACTTGCAGTC+CGG - chr3_2:64104423-64104442 None:intergenic 45.0%
GGAGAAAGAAGCCTGAGCAT+TGG - chr3_2:64098229-64098248 None:intergenic 50.0%
TGAAAGTAAGTCACGTGCGG+CGG - chr3_2:64098258-64098277 None:intergenic 50.0%
CGGTGAAAGTAAGTCACGTG+CGG - chr3_2:64098261-64098280 None:intergenic 50.0%
! TGTCGGAGTTTTTCGTTCGG+CGG - chr3_2:64098327-64098346 None:intergenic 50.0%
! CGTTGATGGAGAGGTTGACA+CGG - chr3_2:64098371-64098390 None:intergenic 50.0%
! TCTTAGCTGCGTTGATGGAG+AGG - chr3_2:64098380-64098399 None:intergenic 50.0%
! GTTGTTTCCGTCGTGGTGTT+CGG - chr3_2:64098406-64098425 None:intergenic 50.0%
GAACACCACGACGGAAACAA+CGG + chr3_2:64098405-64098424 Msa0417000:CDS 50.0%
GTTCTACAGCACGAAGCAAC+CGG + chr3_2:64098445-64098464 Msa0417000:CDS 50.0%
AGCAACGGTTATGAAACCGG+AGG + chr3_2:64098581-64098600 Msa0417000:CDS 50.0%
TACGGCGATAGGTGAACCTT+TGG + chr3_2:64098653-64098672 Msa0417000:CDS 50.0%
AGGGGAAGCTGAACAAGTTC+CGG + chr3_2:64098737-64098756 Msa0417000:CDS 50.0%
AGTGGTTCCTGAAGATCAGC+AGG - chr3_2:64098861-64098880 None:intergenic 50.0%
CTCAAGGCGCAAGTGACATA+GGG - chr3_2:64099329-64099348 None:intergenic 50.0%
TCTCAAGGCGCAAGTGACAT+AGG - chr3_2:64099330-64099349 None:intergenic 50.0%
ACTTGACTGTCATGGCAGGA+TGG + chr3_2:64099536-64099555 Msa0417000:CDS 50.0%
TCATACTCCTGCCATCGTTC+AGG - chr3_2:64099600-64099619 None:intergenic 50.0%
! GGAATCCGTCTTGTTGCTTG+TGG + chr3_2:64099648-64099667 Msa0417000:CDS 50.0%
TGCTTGTGGTACTCCACTGA+AGG + chr3_2:64099662-64099681 Msa0417000:CDS 50.0%
GCCCACTAATTCCTTCTGCT+TGG - chr3_2:64100291-64100310 None:intergenic 50.0%
GCCTGATATGAAGCCTGAAC+CGG - chr3_2:64100350-64100369 None:intergenic 50.0%
TCTATCTGCACAGGCTAGAG+TGG + chr3_2:64100444-64100463 Msa0417000:CDS 50.0%
GGTGCAAGCCATGTCACATA+TGG + chr3_2:64100547-64100566 Msa0417000:CDS 50.0%
CGGCGAATGAACTGTCTTTC+TGG - chr3_2:64100649-64100668 None:intergenic 50.0%
AAGACAGTTCATTCGCCGTG+AGG + chr3_2:64100651-64100670 Msa0417000:CDS 50.0%
AGACAGTTCATTCGCCGTGA+GGG + chr3_2:64100652-64100671 Msa0417000:CDS 50.0%
CAACAGGAACTTCTCCCTCA+CGG - chr3_2:64100669-64100688 None:intergenic 50.0%
ATTTCTGCTACAGGGTCTGG+CGG - chr3_2:64100713-64100732 None:intergenic 50.0%
GCAATTTCTGCTACAGGGTC+TGG - chr3_2:64100716-64100735 None:intergenic 50.0%
! TTGACCGGGTTGAGATTGCT+CGG + chr3_2:64100737-64100756 Msa0417000:CDS 50.0%
TAACCCGAGCAATCTCAACC+CGG - chr3_2:64100744-64100763 None:intergenic 50.0%
CTCGGGTTATGAATGCTGCT+GGG + chr3_2:64100755-64100774 Msa0417000:CDS 50.0%
CGAAATGGCCAACTAACCTG+TGG - chr3_2:64100799-64100818 None:intergenic 50.0%
GCAGACACCATCCTGTCTAA+AGG - chr3_2:64101478-64101497 None:intergenic 50.0%
AGAACTCACTCACCGTTTCC+AGG + chr3_2:64101627-64101646 Msa0417000:CDS 50.0%
AGAACCCAGTGGGGACAAAT+TGG + chr3_2:64102034-64102053 Msa0417000:CDS 50.0%
TACAATCCTTCAGGGCTCAC+TGG + chr3_2:64102850-64102869 Msa0417000:intron 50.0%
GGCCAGTTGCAGACCTAAAT+TGG - chr3_2:64103062-64103081 None:intergenic 50.0%
GCAGATAATTGCTGGGGTTG+TGG + chr3_2:64103119-64103138 Msa0417000:intron 50.0%
CAATTCTTACTGGGGAACGC+AGG + chr3_2:64103215-64103234 Msa0417000:CDS 50.0%
GAATCTGATGTAGGTGGCTC+AGG - chr3_2:64104368-64104387 None:intergenic 50.0%
GAATCTGATGAAGGTGGCTC+AGG - chr3_2:64104452-64104471 None:intergenic 50.0%
GCTCAGGCTTCTTTCTCCAC+AGG + chr3_2:64098231-64098250 Msa0417000:CDS 55.0%
GAAAGTAAGTCACGTGCGGC+GGG - chr3_2:64098257-64098276 None:intergenic 55.0%
! CGGCGGTGGAAGATGAGTTT+TGG - chr3_2:64098310-64098329 None:intergenic 55.0%
TGATGGAGAGGTTGACACGG+CGG - chr3_2:64098368-64098387 None:intergenic 55.0%
GAGAAGAAACGAAGCTCCGG+CGG - chr3_2:64098499-64098518 None:intergenic 55.0%
GGCGGAGGAGGAGAAGATAA+AGG + chr3_2:64098539-64098558 Msa0417000:CDS 55.0%
TACGGCGCCAGTTGAAGCAA+CGG + chr3_2:64098566-64098585 Msa0417000:CDS 55.0%
GACTGTCATGGCAGGATGGA+TGG + chr3_2:64099540-64099559 Msa0417000:CDS 55.0%
TACTCCTGCCATCGTTCAGG+CGG - chr3_2:64099597-64099616 None:intergenic 55.0%
GATATGAAGCCTGAACCGGC+TGG - chr3_2:64100346-64100365 None:intergenic 55.0%
! GCCGGTTCAGGCTTCATATC+AGG + chr3_2:64100346-64100365 Msa0417000:CDS 55.0%
! TGACCGGGTTGAGATTGCTC+GGG + chr3_2:64100738-64100757 Msa0417000:CDS 55.0%
GCTCGGGTTATGAATGCTGC+TGG + chr3_2:64100754-64100773 Msa0417000:CDS 55.0%
TGAATGCTGCTGGGCAGAGA+CGG + chr3_2:64100764-64100783 Msa0417000:CDS 55.0%
ATGCCCTCCCACAGGTTAGT+TGG + chr3_2:64100788-64100807 Msa0417000:intron 55.0%
TGGCCAACTAACCTGTGGGA+GGG - chr3_2:64100794-64100813 None:intergenic 55.0%
ATGGCCAACTAACCTGTGGG+AGG - chr3_2:64100795-64100814 None:intergenic 55.0%
! GGTCTAAAACTCGCTGGCGT+TGG + chr3_2:64102093-64102112 Msa0417000:CDS 55.0%
CAGTATCCAGTGAGCCCTGA+AGG - chr3_2:64102859-64102878 None:intergenic 55.0%
TTGCTGGGGTTGTGGAGCAT+CGG + chr3_2:64103127-64103146 Msa0417000:CDS 55.0%
ATTGACCTCGCACGCTCTAC+CGG + chr3_2:64104317-64104336 Msa0417000:CDS 55.0%
TGAAGGTGGCTCAGGTGACT+CGG - chr3_2:64104444-64104463 None:intergenic 55.0%
! GGAAGGTACGGCACGTGAGA+CGG - chr3_2:64098289-64098308 None:intergenic 60.0%
! CGGAGTTTTTCGTTCGGCGG+TGG - chr3_2:64098324-64098343 None:intergenic 60.0%
GTTTGGCGGCGCGGAATTGT+CGG - chr3_2:64098344-64098363 None:intergenic 60.0%
!! CAACCGGCGAGGAGTGTTGA+TGG + chr3_2:64098461-64098480 Msa0417000:CDS 60.0%
GTGCCATCAACACTCCTCGC+CGG - chr3_2:64098467-64098486 None:intergenic 60.0%
!! ATGGCACCGTTTCTAGCCGC+CGG + chr3_2:64098480-64098499 Msa0417000:CDS 60.0%
GAAGCTCCGGCGGCTAGAAA+CGG - chr3_2:64098489-64098508 None:intergenic 60.0%
TTCTCTCTGCGGCGACGACA+AGG + chr3_2:64098514-64098533 Msa0417000:CDS 60.0%
TCTCTCTGCGGCGACGACAA+GGG + chr3_2:64098515-64098534 Msa0417000:CDS 60.0%
! TATGCACCTCCAGCCGGTTC+AGG + chr3_2:64100334-64100353 Msa0417000:CDS 60.0%
ATGAAGCCTGAACCGGCTGG+AGG - chr3_2:64100343-64100362 None:intergenic 60.0%
ATGCTTGATGGAGGGGCCAC+CGG + chr3_2:64100505-64100524 Msa0417000:CDS 60.0%
GAATGCTGCTGGGCAGAGAC+GGG + chr3_2:64100765-64100784 Msa0417000:CDS 60.0%
CGGCACGTGAGACGGTTACG+CGG - chr3_2:64098281-64098300 None:intergenic 65.0%
GTTGACACGGCGGCGTTTGG+CGG - chr3_2:64098358-64098377 None:intergenic 65.0%
GAGGTTGACACGGCGGCGTT+TGG - chr3_2:64098361-64098380 None:intergenic 65.0%
! CGACGCCGTTGTTTCCGTCG+TGG - chr3_2:64098413-64098432 None:intergenic 65.0%
ACAGCACGAAGCAACCGGCG+AGG + chr3_2:64098450-64098469 Msa0417000:CDS 65.0%
! CGCATTGGCCGCCTGAACGA+TGG + chr3_2:64099586-64099605 Msa0417000:CDS 65.0%
TTGGCCGCCTGAACGATGGC+AGG + chr3_2:64099590-64099609 Msa0417000:CDS 65.0%
CTCTGCGGCGACGACAAGGG+CGG + chr3_2:64098518-64098537 Msa0417000:CDS 70.0%
GAGACGGGATGCCCTCCCAC+AGG + chr3_2:64100780-64100799 Msa0417000:CDS 70.0%
GCAGTCCGGTAGAGCGTGCG+AGG - chr3_2:64104325-64104344 None:intergenic 70.0%
AGTCACGTGCGGCGGGCCTG+TGG - chr3_2:64098250-64098269 None:intergenic 75.0%
TGCGGCGACGACAAGGGCGG+CGG + chr3_2:64098521-64098540 Msa0417000:CDS 75.0%
GACGACAAGGGCGGCGGAGG+AGG + chr3_2:64098527-64098546 Msa0417000:CDS 75.0%
! CACGGCGGCGTTTGGCGGCG+CGG - chr3_2:64098353-64098372 None:intergenic 80.0%
! GGCGACGACAAGGGCGGCGG+AGG + chr3_2:64098524-64098543 Msa0417000:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 64098219 64104541 64098219 ID=Msa0417000;Name=Msa0417000
chr3_2 mRNA 64098219 64104541 64098219 ID=Msa0417000-mRNA-1;Parent=Msa0417000;Name=Msa0417000-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.83|0.57|1|1|1|7|0|774
chr3_2 exon 64098219 64098831 64098219 ID=Msa0417000-mRNA-1:exon:14108;Parent=Msa0417000-mRNA-1
chr3_2 exon 64099502 64099683 64099502 ID=Msa0417000-mRNA-1:exon:14109;Parent=Msa0417000-mRNA-1
chr3_2 exon 64100274 64100801 64100274 ID=Msa0417000-mRNA-1:exon:14110;Parent=Msa0417000-mRNA-1
chr3_2 exon 64101541 64101648 64101541 ID=Msa0417000-mRNA-1:exon:14111;Parent=Msa0417000-mRNA-1
chr3_2 exon 64101736 64102284 64101736 ID=Msa0417000-mRNA-1:exon:14112;Parent=Msa0417000-mRNA-1
chr3_2 exon 64103123 64103236 64103123 ID=Msa0417000-mRNA-1:exon:14113;Parent=Msa0417000-mRNA-1
chr3_2 exon 64104311 64104541 64104311 ID=Msa0417000-mRNA-1:exon:14114;Parent=Msa0417000-mRNA-1
chr3_2 CDS 64098219 64098831 64098219 ID=Msa0417000-mRNA-1:cds;Parent=Msa0417000-mRNA-1
chr3_2 CDS 64099502 64099683 64099502 ID=Msa0417000-mRNA-1:cds;Parent=Msa0417000-mRNA-1
chr3_2 CDS 64100274 64100801 64100274 ID=Msa0417000-mRNA-1:cds;Parent=Msa0417000-mRNA-1
chr3_2 CDS 64101541 64101648 64101541 ID=Msa0417000-mRNA-1:cds;Parent=Msa0417000-mRNA-1
chr3_2 CDS 64101736 64102284 64101736 ID=Msa0417000-mRNA-1:cds;Parent=Msa0417000-mRNA-1
chr3_2 CDS 64103123 64103236 64103123 ID=Msa0417000-mRNA-1:cds;Parent=Msa0417000-mRNA-1
chr3_2 CDS 64104311 64104541 64104311 ID=Msa0417000-mRNA-1:cds;Parent=Msa0417000-mRNA-1
Gene Sequence

>Msa0417000

ATGAAGCCCAATGCTCAGGCTTCTTTCTCCACAGGCCCGCCGCACGTGACTTACTTTCACCGCGTAACCGTCTCACGTGCCGTACCTTCCAAAACTCATCTTCCACCGCCGAACGAAAAACTCCGACAATTCCGCGCCGCCAAACGCCGCCGTGTCAACCTCTCCATCAACGCAGCTAAGAAAACCGAACACCACGACGGAAACAACGGCGTCGAGCGAACAGAATGTTCTACAGCACGAAGCAACCGGCGAGGAGTGTTGATGGCACCGTTTCTAGCCGCCGGAGCTTCGTTTCTTCTCTCTGCGGCGACGACAAGGGCGGCGGAGGAGGAGAAGATAAAGGAGAATACGGCGCCAGTTGAAGCAACGGTTATGAAACCGGAGGAAGTGAAGAAGATAGAGGAGGAAGTGATAACATCGAGGATATACGATGCTACGGCGATAGGTGAACCTTTGGCGATAGGGAAAGAGAAAGGGAAAGTGTGGGAGAAGTTGATGAATGCTAGAGTTGTTTATTTAGGGGAAGCTGAACAAGTTCCGGTTCGAGATGATAAAGAATTGGAGCTTGAGATTGTTAAGAATTTGCATAAGCGTTGTGTTGATGTTGATAAGCATTGTTTCTCACAATTTTGTTACTTACAAAATAAACTTGACTGTCATGGCAGGATGGATGGAGAAACCTTGAAGTCTTATACAACGCATTGGCCGCCTGAACGATGGCAGGAGTATGAACCTATTCTTAGTTACTGTCGTGAAAACGGAATCCGTCTTGTTGCTTGTGGTACTCCACTGAAGATCTTAAGGACTGTCCAAGCAGAAGGAATTAGTGGGCTAACAAAGGCTGAACGTAAATTATATGCACCTCCAGCCGGTTCAGGCTTCATATCAGGCTTTTCTTCTATGTCACGCAGATATTCAGCTGACAGTACTCCAAATCTGTCGTTTCCTTTTGGTCCAAGCTCATATCTATCTGCACAGGCTAGAGTGGTTGACGAGTATACTATGTCCCAGACCATCTTACAAAATATGCTTGATGGAGGGGCCACCGGTATGTTGATAGTTGTGACTGGTGCAAGCCATGTCACATATGGAGCTAGAGGAACTGGGGTGCCTGCAAGAATATCAAGAAAATTACAAAAGAAAAATCAAGTAGTTATATTACTTGACCCAGAAAGACAGTTCATTCGCCGTGAGGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCCGCCAGACCCTGTAGCAGAAATTGCTTTGACCGGGTTGAGATTGCTCGGGTTATGAATGCTGCTGGGCAGAGACGGGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCGGAGGTATTGCAGAACTTCTTTGATCTAGAGAAATATCCTCTGCTTTCAGAACTCACTCACCGTTTCCAGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAGTTCTTGCAAAGACTAGCAATAGAAGAAGGAATATCAGTAACAACTACATTATTAGCACAGTATCAGAAGCGGAAAGAAAACTTCTTTCAAGAGCTTGACTATGTTATTACGGACACTGTCAGAGGATCAGTTGTTGATTTCTTCACAGTGTGGCTTCCTGCACCAACTTTATCATTCCTTTCCTATGCTGATGAGTCAATTGCGCCTGATAACATTAGTTCTCTAATAGGACTTCTTGGCTCCATCCCTGACAATGCATTTCAAAAGAACCCAGTGGGGACAAATTGGAATCTCAATCATCGAATTGCATCAGTTGTATATGGTGGTCTAAAACTCGCTGGCGTTGGATTTATTTCAAGTATTGGAGCTGTTGCTTCATCAAATTCTCTGTTTGCAGTTCGTAAGTTTCTTAATCCAGCAATCATCACTAACAAACAGATTGCAAGGTCACCGATACTCAAAACAGCAGTTGTTTATGCACTTTTTCTTGGAATATCTGCAAATCTCCGTTATCAGATAATTGCTGGGGTTGTGGAGCATCGGATTTCTGATCAGTTTGCTTCCCAAACATTTCTTGTAAATATGCTATCTTTTGTATCACGGACAATCAATTCTTACTGGGGAACGCAGCAATGGATTGACCTCGCACGCTCTACCGGACTGCAAGTTAGAAAGACTGAGTCACCTGAGCCACCTACATCAGATTCTCCAAATCAAGCTGCTATCTTATGCAACTCTACCGGACTGCAAGTTACAAAGACCGAGTCACCTGAGCCACCTTCATCAGATTCTCCAAATCAAGCTGCAATCTTATGCAACGAAGCAGAAGAAGCCAGCATCGATGAGATTAAAAGCGAATGA
Protein sequence

>Msa0417000

MKPNAQASFSTGPPHVTYFHRVTVSRAVPSKTHLPPPNEKLRQFRAAKRRRVNLSINAAKKTEHHDGNNGVERTECSTARSNRRGVLMAPFLAAGASFLLSAATTRAAEEEKIKENTAPVEATVMKPEEVKKIEEEVITSRIYDATAIGEPLAIGKEKGKVWEKLMNARVVYLGEAEQVPVRDDKELELEIVKNLHKRCVDVDKHCFSQFCYLQNKLDCHGRMDGETLKSYTTHWPPERWQEYEPILSYCRENGIRLVACGTPLKILRTVQAEGISGLTKAERKLYAPPAGSGFISGFSSMSRRYSADSTPNLSFPFGPSSYLSAQARVVDEYTMSQTILQNMLDGGATGMLIVVTGASHVTYGARGTGVPARISRKLQKKNQVVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRVEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQNFFDLEKYPLLSELTHRFQGFRERLLADPKFLQRLAIEEGISVTTTLLAQYQKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADESIAPDNISSLIGLLGSIPDNAFQKNPVGTNWNLNHRIASVVYGGLKLAGVGFISSIGAVASSNSLFAVRKFLNPAIITNKQIARSPILKTAVVYALFLGISANLRYQIIAGVVEHRISDQFASQTFLVNMLSFVSRTINSYWGTQQWIDLARSTGLQVRKTESPEPPTSDSPNQAAILCNSTGLQVTKTESPEPPSSDSPNQAAILCNEAEEASIDEIKSE*