AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0080100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0080100 MtrunA17_Chr1g0192001 98.587 283 4 0 1 283 1 283 0.0 568
Msa0080100 MtrunA17_Chr7g0222751 25.405 185 103 6 97 281 88 237 2.74e-14 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0080100 AT3G05410.2 71.545 246 67 1 41 283 35 280 7.83e-126 360
Msa0080100 AT3G05410.1 72.028 143 37 1 41 180 35 177 5.91e-65 201
Msa0080100 AT3G05410.3 69.536 151 42 2 41 187 35 185 1.95e-64 201
Msa0080100 AT3G55330.1 24.868 189 99 6 98 282 80 229 1.48e-12 66.2

Find 156 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGCCTCTCCCAGGCTTTC+AGG 0.158007 1_2:+58330121 Msa0080100:three_prime_UTR
GAAACCATTGCAGTCAAATT+AGG 0.160025 1_2:+58329631 Msa0080100:three_prime_UTR
GAATTCCAGCTCGTAGTATT+TGG 0.230692 1_2:-58328887 Msa0080090:three_prime_UTR
AGGGCCTAGCCTCAGTCTTT+TGG 0.239071 1_2:-58329110 Msa0080090:three_prime_UTR
ATTCATATTATAAATTATAT+TGG 0.264994 1_2:+58330479 Msa0080100:three_prime_UTR
AAATGACAGGCATTATTTAA+AGG 0.277554 1_2:+58329963 Msa0080100:three_prime_UTR
ACTTAAATTAAGAAATGTTT+GGG 0.280205 1_2:-58329297 Msa0080090:three_prime_UTR
ATCCTCCTCCACTGAATTTA+CGG 0.280224 1_2:+58328483 Msa0080100:CDS
TACTTAAATTAAGAAATGTT+TGG 0.289154 1_2:-58329298 Msa0080090:three_prime_UTR
GTAGCCTTAGGTGCAAATTT+TGG 0.289386 1_2:+58328138 Msa0080100:CDS
AATTTATATACCCGGTGAAT+TGG 0.290188 1_2:+58328399 Msa0080100:CDS
CATTTCTTAATTTAAGTAAA+AGG 0.293637 1_2:+58329303 Msa0080100:three_prime_UTR
TGAAGCAAAACTTCAAGTTT+TGG 0.298343 1_2:-58330059 Msa0080090:CDS
AAGCCGCCGCTCAAATTTCT+TGG 0.299166 1_2:-58328088 Msa0080090:three_prime_UTR
ACTAAAGGGGTCAACTCTTT+AGG 0.299811 1_2:-58330424 Msa0080090:intron
CGGCGGCTTCTTGTGGGAAT+AGG 0.303411 1_2:+58328102 Msa0080100:CDS
ACTCCTGGCCAGGCTGATTC+AGG 0.309473 1_2:-58328997 Msa0080090:three_prime_UTR
AGTATGAAATTTACATACTT+TGG 0.321346 1_2:+58329817 Msa0080100:three_prime_UTR
ATCACATTACTATGACAAAT+TGG 0.322607 1_2:+58330202 Msa0080100:three_prime_UTR
AAACCTGCCTTTGCCATTAG+AGG 0.339831 1_2:-58330541 Msa0080090:intron
GTATGAAATTTACATACTTT+GGG 0.352409 1_2:+58329818 Msa0080100:three_prime_UTR
TTAGTTTAACTCCCCTCTAA+TGG 0.357436 1_2:+58330528 Msa0080100:three_prime_UTR
CTTGGTGGAGAGATTGGATA+TGG 0.368338 1_2:-58329658 Msa0080090:CDS
CTTTCAAGGATTGAAGCATT+TGG 0.370030 1_2:+58328748 Msa0080100:intron
ACCAGACTTGGTGGAGAGAT+TGG 0.370100 1_2:-58329664 Msa0080090:intron
TCAGCTTCACTTGTAGCCTT+AGG 0.370109 1_2:+58328126 Msa0080100:CDS
ACCAATGTTCCCTTCACATC+TGG 0.372669 1_2:-58328829 Msa0080090:three_prime_UTR
GCTGTAATTCGGACCATAAC+AGG 0.374025 1_2:+58328793 Msa0080100:CDS
TAGTTTAGACTTAAGAGTTC+AGG 0.375314 1_2:+58330443 Msa0080100:three_prime_UTR
AAGAGAAATGGAACTATCAT+TGG 0.385091 1_2:+58328460 Msa0080100:CDS
GTGGTCTCCTGCTGAGGAAT+TGG 0.385767 1_2:+58328065 Msa0080100:CDS
AATGAACCAGTTGTCGCATT+TGG 0.388347 1_2:+58328521 Msa0080100:CDS
ACTCTTAAGTCTAAACTAAA+GGG 0.388891 1_2:-58330438 Msa0080090:intron
AAATGTTTGGGGCTCAGAAT+TGG 0.390262 1_2:-58329285 Msa0080090:three_prime_UTR
TACGAGAAGTCTAGAGCAAC+GGG 0.393815 1_2:-58328590 Msa0080090:intron
CTGCGACTGCAAACGAGGTT+TGG 0.395300 1_2:+58327961 Msa0080100:CDS
GAGTTGAGAGTCCTTCGTTT+GGG 0.402187 1_2:+58328911 Msa0080100:CDS
ATTTAGCTTAGTCTCAAATC+AGG 0.402397 1_2:-58329551 Msa0080090:three_prime_UTR
TCCAATCTCTCCACCAAGTC+TGG 0.405368 1_2:+58329663 Msa0080100:three_prime_UTR
AGCTGCTAAAAGAAGAGAAA+TGG 0.407652 1_2:+58328448 Msa0080100:CDS
CCGTTGCCCGGATCCTGTTA+TGG 0.409928 1_2:-58328806 Msa0080090:three_prime_UTR
AAACCATTGCAGTCAAATTA+GGG 0.411485 1_2:+58329632 Msa0080100:three_prime_UTR
CAACGCTTTCATAAAACAAA+AGG 0.415168 1_2:+58330240 Msa0080100:three_prime_UTR
AGAGTTGAGAGTCCTTCGTT+TGG 0.416110 1_2:+58328910 Msa0080100:CDS
CTTCACATCTGGCCGTTGCC+CGG 0.416426 1_2:-58328818 Msa0080090:three_prime_UTR
ATTTATATACCCGGTGAATT+GGG 0.421832 1_2:+58328400 Msa0080100:CDS
GGAGTTAAACTAATGTGATA+TGG 0.423174 1_2:-58330518 Msa0080090:intron
ATTTGGAAGCCCTGAGGAGG+TGG 0.425175 1_2:+58328765 Msa0080100:CDS
AAGTTACAAGTTCGACCTAC+TGG 0.427018 1_2:-58329156 Msa0080090:three_prime_UTR
GAGAGGCAATGGGCGGGTAG+TGG 0.432488 1_2:+58329761 Msa0080100:three_prime_UTR
TTTCTTATCTCCTGAAAGCC+TGG 0.435049 1_2:-58330131 Msa0080090:CDS
CCTGGGAGAGGCTGTAAGAT+TGG 0.435726 1_2:-58330113 Msa0080090:CDS
TTCTTGGCCAATTCCTCAGC+AGG 0.436558 1_2:-58328072 Msa0080090:three_prime_UTR
TTTGAGCGGCGGCTTCTTGT+GGG 0.438842 1_2:+58328096 Msa0080100:CDS
AACTCTTAAGTCTAAACTAA+AGG 0.438930 1_2:-58330439 Msa0080090:intron
ATTCGGACCATAACAGGATC+CGG 0.445861 1_2:+58328799 Msa0080100:CDS
TAGAAATCCGACTTCACTCC+TGG 0.458999 1_2:-58329012 Msa0080090:three_prime_UTR
GTAACGTGTGTAGCCTCCTA+TGG 0.459762 1_2:-58328232 Msa0080090:three_prime_UTR
TGTGATATGGACAAAGCTTA+AGG 0.463042 1_2:-58330505 Msa0080090:intron
TAAATAGTGTGATAATTGTA+TGG 0.463309 1_2:+58330286 Msa0080100:three_prime_UTR
ATGTCACAATTATTATATGC+TGG 0.468561 1_2:-58327888 Msa0080090:intron
GCACCTGAATCAGCCTGGCC+AGG 0.474305 1_2:+58328994 Msa0080100:CDS
AGAGGCAATGGGCGGGTAGT+GGG 0.478479 1_2:+58329762 Msa0080100:three_prime_UTR
ATTTGAGCGGCGGCTTCTTG+TGG 0.483866 1_2:+58328095 Msa0080100:CDS
AGTTGTCGCATTTGGTCCCC+CGG 0.484347 1_2:+58328529 Msa0080100:CDS
ATCCGACTTCACTCCTGGCC+AGG 0.484525 1_2:-58329007 Msa0080090:three_prime_UTR
TGGTCAGTTGTAATGAATAC+AGG 0.486502 1_2:+58330306 Msa0080100:three_prime_UTR
TGACATAAAGAGTTGAAAGA+TGG 0.491038 1_2:+58327930 Msa0080100:exon
GCCACCAAAATTTGCACCTA+AGG 0.495624 1_2:-58328142 Msa0080090:three_prime_UTR
TGGAAGCCCTGAGGAGGTGG+GGG 0.506103 1_2:+58328768 Msa0080100:CDS
CGGGCAACGGCCAGATGTGA+AGG 0.506339 1_2:+58328819 Msa0080100:CDS
TTTGATTTGCTTGGCTACAC+AGG 0.508539 1_2:+58329203 Msa0080100:three_prime_UTR
CTTGGTTTGTCACCACAGAA+TGG 0.510003 1_2:+58328180 Msa0080100:CDS
GTGTCTGTTGTGCTCGTGGT+GGG 0.510607 1_2:+58328947 Msa0080100:CDS
TTTCAGGAGATAAGAAATCA+AGG 0.511304 1_2:+58330137 Msa0080100:three_prime_UTR
ATATACCCGGTGAATTGGGT+TGG 0.512379 1_2:+58328404 Msa0080100:CDS
TTCTTATCTCCTGAAAGCCT+GGG 0.514336 1_2:-58330130 Msa0080090:CDS
CTTCATGTTCATTAGGTAGA+CGG 0.516591 1_2:+58330077 Msa0080100:three_prime_UTR
ATTTCAGTCCACTGTTCAGT+TGG 0.520271 1_2:-58330161 Msa0080090:intron
GCTCAGAATTGGCATCAGCC+AGG 0.521535 1_2:-58329274 Msa0080090:three_prime_UTR
ACTGACATTGAGTTCACCAT+TGG 0.522774 1_2:-58328555 Msa0080090:three_prime_UTR
GGCTGTAAGATTGGCAGAGG+AGG 0.525897 1_2:-58330104 Msa0080090:CDS
ATCTCCTGAAAGCCTGGGAG+AGG 0.527327 1_2:-58330125 Msa0080090:CDS
GCTCTTCACGTTAAATGCTC+AGG 0.527986 1_2:+58328972 Msa0080100:CDS
TTGAGTTCACCATTGGAACC+CGG 0.530602 1_2:-58328548 Msa0080090:three_prime_UTR
AAAAGACTGAGGCTAGGCCC+TGG 0.533144 1_2:+58329112 Msa0080100:three_prime_UTR
TGCAAACGAGGTTTGGAGCA+TGG 0.534099 1_2:+58327968 Msa0080100:CDS
AGAGGCTGTAAGATTGGCAG+AGG 0.535711 1_2:-58330107 Msa0080090:CDS
GTCAATACAATATAAATGAC+AGG 0.537022 1_2:+58329950 Msa0080100:three_prime_UTR
TTTGGAAGCCCTGAGGAGGT+GGG 0.538503 1_2:+58328766 Msa0080100:CDS
TGATCTCCAACCCAATTCAC+CGG 0.539335 1_2:-58328410 Msa0080090:three_prime_UTR
GGCCGTAAATTCAGTGGAGG+AGG 0.539999 1_2:-58328485 Msa0080090:three_prime_UTR
CTCAGGCACCTGAATCAGCC+TGG 0.542478 1_2:+58328989 Msa0080100:CDS
AACCTGCCTTTGCCATTAGA+GGG 0.542938 1_2:-58330540 Msa0080090:intron
AGACCCTAATTTGACTGCAA+TGG 0.543203 1_2:-58329635 Msa0080090:CDS
AAATGCCAAATACTACGAGC+TGG 0.544263 1_2:+58328882 Msa0080100:CDS
CTAGATGTGCTTTATCCCAT+AGG 0.544325 1_2:+58328216 Msa0080100:CDS
AAAGACTGAGGCTAGGCCCT+GGG 0.545030 1_2:+58329113 Msa0080100:three_prime_UTR
GACAGAACACAGAGAGGCAA+TGG 0.551899 1_2:+58329750 Msa0080100:three_prime_UTR
TTGGAAGCCCTGAGGAGGTG+GGG 0.553254 1_2:+58328767 Msa0080100:CDS
TGAGTTCACCATTGGAACCC+GGG 0.558641 1_2:-58328547 Msa0080090:three_prime_UTR
GGTAAAATCAAGTTTGAGAG+AGG 0.559113 1_2:+58328849 Msa0080100:CDS
CCAATCTTACAGCCTCTCCC+AGG 0.564811 1_2:+58330113 Msa0080100:three_prime_UTR
CCATAACAGGATCCGGGCAA+CGG 0.566963 1_2:+58328806 Msa0080100:CDS
TTTGGACATTTATGCAGGTG+GGG 0.569138 1_2:-58329900 Msa0080090:intron
TTCGGACCATAACAGGATCC+GGG 0.570845 1_2:+58328800 Msa0080100:CDS
ATTGACACAAGAGAGGGGTT+CGG 0.572074 1_2:+58328255 Msa0080100:CDS
TAACGTGTGTAGCCTCCTAT+GGG 0.572999 1_2:-58328231 Msa0080090:three_prime_UTR
ACAGAACACAGAGAGGCAAT+GGG 0.574728 1_2:+58329751 Msa0080100:three_prime_UTR
CGTTACATTGACACAAGAGA+GGG 0.575788 1_2:+58328249 Msa0080100:CDS
GTTTGTGTCTGTTGTGCTCG+TGG 0.581200 1_2:+58328943 Msa0080100:CDS
TGATTCTCTATGTCTAATGT+CGG 0.585827 1_2:+58329421 Msa0080100:three_prime_UTR
TGCAACTGCGACTGCAAACG+AGG 0.592179 1_2:+58327956 Msa0080100:CDS
GCCAGATGTGAAGGGAACAT+TGG 0.595709 1_2:+58328828 Msa0080100:CDS
TCTGTTGTGCTCGTGGTGGG+AGG 0.599561 1_2:+58328950 Msa0080100:CDS
AACACAGAGAGGCAATGGGC+GGG 0.599785 1_2:+58329755 Msa0080100:three_prime_UTR
TGTGTCTGTTGTGCTCGTGG+TGG 0.600729 1_2:+58328946 Msa0080100:CDS
AGCCTGGCCAGGAGTGAAGT+CGG 0.608593 1_2:+58329005 Msa0080100:CDS
AGTAGTGTGGTCTCCTGCTG+AGG 0.611268 1_2:+58328059 Msa0080100:CDS
TTCAGTTTACGACCATTCTG+TGG 0.611988 1_2:-58328192 Msa0080090:three_prime_UTR
TTACGAGAAGTCTAGAGCAA+CGG 0.612215 1_2:-58328591 Msa0080090:intron
ATTTGAGACTAAGCTAAATG+TGG 0.614905 1_2:+58329555 Msa0080100:three_prime_UTR
GGGCAACGGCCAGATGTGAA+GGG 0.621572 1_2:+58328820 Msa0080100:CDS
GAACGTGGCCGTAAATTCAG+TGG 0.623294 1_2:-58328491 Msa0080090:three_prime_UTR
TGGCCAAGAAATTTGAGCGG+CGG 0.623675 1_2:+58328085 Msa0080100:CDS
ACCTGCCTTTGCCATTAGAG+GGG 0.630461 1_2:-58330539 Msa0080090:intron
TACTATGACAAATTGGACAC+AGG 0.635835 1_2:+58330209 Msa0080100:three_prime_UTR
AGCATTTGGAAGCCCTGAGG+AGG 0.637156 1_2:+58328762 Msa0080100:CDS
CTTAAATTAAGAAATGTTTG+GGG 0.639517 1_2:-58329296 Msa0080090:three_prime_UTR
ATCTCCAAAAGACTGAGGCT+AGG 0.640732 1_2:+58329106 Msa0080100:three_prime_UTR
GATCTCCAACCCAATTCACC+GGG 0.641687 1_2:-58328409 Msa0080090:three_prime_UTR
GATGTGCTTTATCCCATAGG+AGG 0.642681 1_2:+58328219 Msa0080100:CDS
CTCTTAAGTCTAAACTAAAG+GGG 0.643252 1_2:-58330437 Msa0080090:intron
ACATTGTGTCGCCCAAACGA+AGG 0.643806 1_2:-58328922 Msa0080090:three_prime_UTR
TTCAGGAGATAAGAAATCAA+GGG 0.645711 1_2:+58330138 Msa0080100:three_prime_UTR
ATAATCAGAATTTATATACC+CGG 0.645742 1_2:+58328391 Msa0080100:intron
ATCAAGGGCCAACTGAACAG+TGG 0.650563 1_2:+58330153 Msa0080100:three_prime_UTR
GAACACAGAGAGGCAATGGG+CGG 0.654422 1_2:+58329754 Msa0080100:three_prime_UTR
ACGTTACATTGACACAAGAG+AGG 0.655696 1_2:+58328248 Msa0080100:CDS
AATTGGCCAAGAAATTTGAG+CGG 0.658157 1_2:+58328082 Msa0080100:CDS
GAGTTCACCATTGGAACCCG+GGG 0.659149 1_2:-58328546 Msa0080090:three_prime_UTR
AAATAAAATTTATATCCAGT+AGG 0.661536 1_2:+58329141 Msa0080100:three_prime_UTR
GCATGGAACAGAAATTGCAT+TGG 0.662149 1_2:+58327985 Msa0080100:CDS
CGAGAAGTCTAGAGCAACGG+GGG 0.663936 1_2:-58328588 Msa0080090:intron
CGTGGCCGTAAATTCAGTGG+AGG 0.664103 1_2:-58328488 Msa0080090:three_prime_UTR
ACGAGAAAATGTCTAAGCAG+AGG 0.664650 1_2:-58329600 Msa0080090:CDS
ACTAAAATACTAATTTACTG+CGG 0.674112 1_2:-58330357 Msa0080090:intron
AAATGGGACAGAACACAGAG+AGG 0.678482 1_2:+58329744 Msa0080100:three_prime_UTR
AAGTTAAAGAAGCAGTAGTG+TGG 0.682044 1_2:+58328046 Msa0080100:CDS
TGAAGCATTTGGAAGCCCTG+AGG 0.694186 1_2:+58328759 Msa0080100:CDS
GGTAGATCTCCAAAAGACTG+AGG 0.698286 1_2:+58329101 Msa0080100:three_prime_UTR
GTTACATTGACACAAGAGAG+GGG 0.702309 1_2:+58328250 Msa0080100:CDS
GATATGGACAAAGCTTAAGG+AGG 0.705074 1_2:-58330502 Msa0080090:intron
GGTTCATTGACATTAGAACG+TGG 0.752339 1_2:-58328506 Msa0080090:three_prime_UTR
AGTTCACCATTGGAACCCGG+GGG 0.756243 1_2:-58328545 Msa0080090:three_prime_UTR
ACGAGAAGTCTAGAGCAACG+GGG 0.790023 1_2:-58328589 Msa0080090:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATTTAATTAATTGTTAAT+TGG + chr1_2:58328344-58328363 Msa0080100:intron 10.0%
!! CATTTAATTAATTGTTAATT+GGG + chr1_2:58328345-58328364 Msa0080100:intron 10.0%
!! ATTTAATTAATTGTTAATTG+GGG + chr1_2:58328346-58328365 Msa0080100:intron 10.0%
!! AAATAAAATTTATATCCAGT+AGG + chr1_2:58329141-58329160 Msa0080100:three_prime_UTR 15.0%
!! ACTTAAATTAAGAAATGTTT+GGG - chr1_2:58329300-58329319 Msa0080090:three_prime_UTR 15.0%
!! TACTTAAATTAAGAAATGTT+TGG - chr1_2:58329301-58329320 Msa0080090:three_prime_UTR 15.0%
!! CATTTCTTAATTTAAGTAAA+AGG + chr1_2:58329303-58329322 Msa0080100:three_prime_UTR 15.0%
!!! TAATATGAATTTTTTGTGTA+GGG - chr1_2:58330469-58330488 Msa0080090:intron 15.0%
!!! ATAATATGAATTTTTTGTGT+AGG - chr1_2:58330470-58330489 Msa0080090:intron 15.0%
!! TATTCATACATTAAAAAGCA+TGG + chr1_2:58328317-58328336 Msa0080100:intron 20.0%
!! ATAATCAGAATTTATATACC+CGG + chr1_2:58328391-58328410 Msa0080100:intron 20.0%
!! TTATTGAAAACTTGAAAACA+AGG + chr1_2:58328701-58328720 Msa0080100:intron 20.0%
!! CTTAAATTAAGAAATGTTTG+GGG - chr1_2:58329299-58329318 Msa0080090:three_prime_UTR 20.0%
!! AGTATGAAATTTACATACTT+TGG + chr1_2:58329817-58329836 Msa0080100:three_prime_UTR 20.0%
!! GTATGAAATTTACATACTTT+GGG + chr1_2:58329818-58329837 Msa0080100:three_prime_UTR 20.0%
!! AAATGTCCAAAAATAAGTTA+AGG + chr1_2:58329912-58329931 Msa0080100:three_prime_UTR 20.0%
!! TAAATAGTGTGATAATTGTA+TGG + chr1_2:58330286-58330305 Msa0080100:three_prime_UTR 20.0%
!!! AACCATATTTTTGTATAGAT+TGG - chr1_2:58330332-58330351 Msa0080090:intron 20.0%
!! ACTAAAATACTAATTTACTG+CGG - chr1_2:58330360-58330379 Msa0080090:intron 20.0%
! ATGTCACAATTATTATATGC+TGG - chr1_2:58327891-58327910 Msa0080090:intron 25.0%
! TGTTAAGAAATAAAGTGAAG+TGG - chr1_2:58328641-58328660 Msa0080090:intron 25.0%
! ATTTCTTAACACTTGTGAAT+TGG + chr1_2:58328650-58328669 Msa0080100:intron 25.0%
!! CTTTTATGGAAAATAACAGT+GGG + chr1_2:58329080-58329099 Msa0080100:three_prime_UTR 25.0%
!!! AAATTTTATTTGTACTCCCA+GGG - chr1_2:58329132-58329151 Msa0080090:three_prime_UTR 25.0%
!!! TAAATTTTATTTGTACTCCC+AGG - chr1_2:58329133-58329152 Msa0080090:three_prime_UTR 25.0%
!!! TTATTTTGTTTGCAAAGCTA+AGG + chr1_2:58329179-58329198 Msa0080100:three_prime_UTR 25.0%
!!! ATGTTCTGAGATGAAAAAAT+GGG + chr1_2:58329728-58329747 Msa0080100:three_prime_UTR 25.0%
!!! TTATTTTTGGACATTTATGC+AGG - chr1_2:58329908-58329927 Msa0080090:intron 25.0%
!!! TCAAGTCCTTAACTTATTTT+TGG - chr1_2:58329921-58329940 Msa0080090:intron 25.0%
! GTCAATACAATATAAATGAC+AGG + chr1_2:58329950-58329969 Msa0080100:three_prime_UTR 25.0%
! AAATGACAGGCATTATTTAA+AGG + chr1_2:58329963-58329982 Msa0080100:three_prime_UTR 25.0%
! ATCACATTACTATGACAAAT+TGG + chr1_2:58330202-58330221 Msa0080100:three_prime_UTR 25.0%
!! ATTTACACTACTGTTCTTTT+TGG - chr1_2:58330383-58330402 Msa0080090:intron 25.0%
! ACTCTTAAGTCTAAACTAAA+GGG - chr1_2:58330441-58330460 Msa0080090:intron 25.0%
! AACTCTTAAGTCTAAACTAA+AGG - chr1_2:58330442-58330461 Msa0080090:intron 25.0%
AAGAGGTAGCAAAAATATAG+AGG + chr1_2:58327839-58327858 Msa0080100:five_prime_UTR 30.0%
TGACATAAAGAGTTGAAAGA+TGG + chr1_2:58327930-58327949 Msa0080100:exon 30.0%
! TTAATTGGGGATGATTTTGA+TGG + chr1_2:58328359-58328378 Msa0080100:intron 30.0%
AATTTATATACCCGGTGAAT+TGG + chr1_2:58328399-58328418 Msa0080100:CDS 30.0%
ATTTATATACCCGGTGAATT+GGG + chr1_2:58328400-58328419 Msa0080100:CDS 30.0%
AAGAGAAATGGAACTATCAT+TGG + chr1_2:58328460-58328479 Msa0080100:CDS 30.0%
! TCAAGTTTTCAATAAGCACA+TGG - chr1_2:58328696-58328715 Msa0080090:intron 30.0%
! TAGTTCAGTTGAAGCTTTTA+TGG + chr1_2:58329066-58329085 Msa0080100:exon 30.0%
! GCTTTTATGGAAAATAACAG+TGG + chr1_2:58329079-58329098 Msa0080100:three_prime_UTR 30.0%
!!! GGTTGTGTTTTTTATCTGAA+AGG + chr1_2:58329249-58329268 Msa0080100:three_prime_UTR 30.0%
TGATTCTCTATGTCTAATGT+CGG + chr1_2:58329421-58329440 Msa0080100:three_prime_UTR 30.0%
! ATTTAGCTTAGTCTCAAATC+AGG - chr1_2:58329554-58329573 Msa0080090:three_prime_UTR 30.0%
! ATTTGAGACTAAGCTAAATG+TGG + chr1_2:58329555-58329574 Msa0080100:three_prime_UTR 30.0%
AAACCATTGCAGTCAAATTA+GGG + chr1_2:58329632-58329651 Msa0080100:three_prime_UTR 30.0%
!! GATGTTCTGAGATGAAAAAA+TGG + chr1_2:58329727-58329746 Msa0080100:three_prime_UTR 30.0%
!! TGAAGCAAAACTTCAAGTTT+TGG - chr1_2:58330062-58330081 Msa0080090:CDS 30.0%
! AGTTTTGCTTCATGTTCATT+AGG + chr1_2:58330070-58330089 Msa0080100:three_prime_UTR 30.0%
TTTCAGGAGATAAGAAATCA+AGG + chr1_2:58330137-58330156 Msa0080100:three_prime_UTR 30.0%
TTCAGGAGATAAGAAATCAA+GGG + chr1_2:58330138-58330157 Msa0080100:three_prime_UTR 30.0%
CAACGCTTTCATAAAACAAA+AGG + chr1_2:58330240-58330259 Msa0080100:three_prime_UTR 30.0%
GGCCAATCTATACAAAAATA+TGG + chr1_2:58330327-58330346 Msa0080100:three_prime_UTR 30.0%
CTCTTAAGTCTAAACTAAAG+GGG - chr1_2:58330440-58330459 Msa0080090:intron 30.0%
TAGTTTAGACTTAAGAGTTC+AGG + chr1_2:58330443-58330462 Msa0080100:three_prime_UTR 30.0%
GGAGTTAAACTAATGTGATA+TGG - chr1_2:58330521-58330540 Msa0080090:intron 30.0%
AAGTTAAAGAAGCAGTAGTG+TGG + chr1_2:58328046-58328065 Msa0080100:CDS 35.0%
AATTGGCCAAGAAATTTGAG+CGG + chr1_2:58328082-58328101 Msa0080100:CDS 35.0%
!!! GGCATCACTAGTTTTTTTCT+TGG + chr1_2:58328162-58328181 Msa0080100:CDS 35.0%
AGCTGCTAAAAGAAGAGAAA+TGG + chr1_2:58328448-58328467 Msa0080100:CDS 35.0%
!!! GCGTGTGTTTTTAACTTTCA+AGG + chr1_2:58328734-58328753 Msa0080100:intron 35.0%
! CTTTCAAGGATTGAAGCATT+TGG + chr1_2:58328748-58328767 Msa0080100:intron 35.0%
GGTAAAATCAAGTTTGAGAG+AGG + chr1_2:58328849-58328868 Msa0080100:CDS 35.0%
!!! AGCTAAGGTTTTGATTTGCT+TGG + chr1_2:58329194-58329213 Msa0080100:three_prime_UTR 35.0%
!!! CCGAAACTGCATTAGTTTTT+GGG - chr1_2:58329231-58329250 Msa0080090:three_prime_UTR 35.0%
CCCAAAAACTAATGCAGTTT+CGG + chr1_2:58329228-58329247 Msa0080100:three_prime_UTR 35.0%
!!! ACCGAAACTGCATTAGTTTT+TGG - chr1_2:58329232-58329251 Msa0080090:three_prime_UTR 35.0%
!!! TTTTTTATCTGAAAGGTGCC+TGG + chr1_2:58329256-58329275 Msa0080100:three_prime_UTR 35.0%
GAAACCATTGCAGTCAAATT+AGG + chr1_2:58329631-58329650 Msa0080100:three_prime_UTR 35.0%
!!! GATTGTTGTTTTACCAGACT+TGG - chr1_2:58329679-58329698 Msa0080090:intron 35.0%
! TTTTGGACATTTATGCAGGT+GGG - chr1_2:58329904-58329923 Msa0080090:intron 35.0%
! TTTTTGGACATTTATGCAGG+TGG - chr1_2:58329905-58329924 Msa0080090:intron 35.0%
!! AGCAAAACTTCAAGTTTTGG+AGG - chr1_2:58330059-58330078 Msa0080090:CDS 35.0%
CTTCATGTTCATTAGGTAGA+CGG + chr1_2:58330077-58330096 Msa0080100:three_prime_UTR 35.0%
TACTATGACAAATTGGACAC+AGG + chr1_2:58330209-58330228 Msa0080100:three_prime_UTR 35.0%
TGGTCAGTTGTAATGAATAC+AGG + chr1_2:58330306-58330325 Msa0080100:three_prime_UTR 35.0%
TGTGATATGGACAAAGCTTA+AGG - chr1_2:58330508-58330527 Msa0080090:intron 35.0%
GCATGGAACAGAAATTGCAT+TGG + chr1_2:58327985-58328004 Msa0080100:CDS 40.0%
!! GTAGCCTTAGGTGCAAATTT+TGG + chr1_2:58328138-58328157 Msa0080100:CDS 40.0%
TTCAGTTTACGACCATTCTG+TGG - chr1_2:58328195-58328214 Msa0080090:three_prime_UTR 40.0%
CTAGATGTGCTTTATCCCAT+AGG + chr1_2:58328216-58328235 Msa0080100:CDS 40.0%
ACGTTACATTGACACAAGAG+AGG + chr1_2:58328248-58328267 Msa0080100:CDS 40.0%
CGTTACATTGACACAAGAGA+GGG + chr1_2:58328249-58328268 Msa0080100:CDS 40.0%
GTTACATTGACACAAGAGAG+GGG + chr1_2:58328250-58328269 Msa0080100:CDS 40.0%
ATCCTCCTCCACTGAATTTA+CGG + chr1_2:58328483-58328502 Msa0080100:CDS 40.0%
GGTTCATTGACATTAGAACG+TGG - chr1_2:58328509-58328528 Msa0080090:three_prime_UTR 40.0%
AATGAACCAGTTGTCGCATT+TGG + chr1_2:58328521-58328540 Msa0080100:CDS 40.0%
ACTGACATTGAGTTCACCAT+TGG - chr1_2:58328558-58328577 Msa0080090:three_prime_UTR 40.0%
! TTACGAGAAGTCTAGAGCAA+CGG - chr1_2:58328594-58328613 Msa0080090:intron 40.0%
! TGGTAGCTAGTAGTAATGGA+TGG - chr1_2:58328621-58328640 Msa0080090:intron 40.0%
GAAGTGGTAGCTAGTAGTAA+TGG - chr1_2:58328625-58328644 Msa0080090:intron 40.0%
AAATGCCAAATACTACGAGC+TGG + chr1_2:58328882-58328901 Msa0080100:CDS 40.0%
GAATTCCAGCTCGTAGTATT+TGG - chr1_2:58328890-58328909 Msa0080090:three_prime_UTR 40.0%
AAGTTACAAGTTCGACCTAC+TGG - chr1_2:58329159-58329178 Msa0080090:three_prime_UTR 40.0%
!! TTTGATTTGCTTGGCTACAC+AGG + chr1_2:58329203-58329222 Msa0080100:three_prime_UTR 40.0%
! AAATGTTTGGGGCTCAGAAT+TGG - chr1_2:58329288-58329307 Msa0080090:three_prime_UTR 40.0%
ACGAGAAAATGTCTAAGCAG+AGG - chr1_2:58329603-58329622 Msa0080090:CDS 40.0%
AGACCCTAATTTGACTGCAA+TGG - chr1_2:58329638-58329657 Msa0080090:CDS 40.0%
!!! TGTTGTTTTACCAGACTTGG+TGG - chr1_2:58329676-58329695 Msa0080090:intron 40.0%
TTTGGACATTTATGCAGGTG+GGG - chr1_2:58329903-58329922 Msa0080090:intron 40.0%
AGAGAAAAATCGCACGCAAA+TGG + chr1_2:58329986-58330005 Msa0080100:three_prime_UTR 40.0%
TTCTTATCTCCTGAAAGCCT+GGG - chr1_2:58330133-58330152 Msa0080090:CDS 40.0%
TTTCTTATCTCCTGAAAGCC+TGG - chr1_2:58330134-58330153 Msa0080090:CDS 40.0%
ATTTCAGTCCACTGTTCAGT+TGG - chr1_2:58330164-58330183 Msa0080090:intron 40.0%
ACTAAAGGGGTCAACTCTTT+AGG - chr1_2:58330427-58330446 Msa0080090:intron 40.0%
GATATGGACAAAGCTTAAGG+AGG - chr1_2:58330505-58330524 Msa0080090:intron 40.0%
TCAGCTTCACTTGTAGCCTT+AGG + chr1_2:58328126-58328145 Msa0080100:CDS 45.0%
! GCCTTAGGTGCAAATTTTGG+TGG + chr1_2:58328141-58328160 Msa0080100:CDS 45.0%
GCCACCAAAATTTGCACCTA+AGG - chr1_2:58328145-58328164 Msa0080090:three_prime_UTR 45.0%
!! CTTGGTTTGTCACCACAGAA+TGG + chr1_2:58328180-58328199 Msa0080100:CDS 45.0%
GATGTGCTTTATCCCATAGG+AGG + chr1_2:58328219-58328238 Msa0080100:CDS 45.0%
TAACGTGTGTAGCCTCCTAT+GGG - chr1_2:58328234-58328253 Msa0080090:three_prime_UTR 45.0%
ATTGACACAAGAGAGGGGTT+CGG + chr1_2:58328255-58328274 Msa0080100:CDS 45.0%
ATATACCCGGTGAATTGGGT+TGG + chr1_2:58328404-58328423 Msa0080100:CDS 45.0%
TGATCTCCAACCCAATTCAC+CGG - chr1_2:58328413-58328432 Msa0080090:three_prime_UTR 45.0%
TTGAGTTCACCATTGGAACC+CGG - chr1_2:58328551-58328570 Msa0080090:three_prime_UTR 45.0%
! TACGAGAAGTCTAGAGCAAC+GGG - chr1_2:58328593-58328612 Msa0080090:intron 45.0%
GCTGTAATTCGGACCATAAC+AGG + chr1_2:58328793-58328812 Msa0080100:CDS 45.0%
ATTCGGACCATAACAGGATC+CGG + chr1_2:58328799-58328818 Msa0080100:CDS 45.0%
ACCAATGTTCCCTTCACATC+TGG - chr1_2:58328832-58328851 Msa0080090:three_prime_UTR 45.0%
AGAGTTGAGAGTCCTTCGTT+TGG + chr1_2:58328910-58328929 Msa0080100:CDS 45.0%
GAGTTGAGAGTCCTTCGTTT+GGG + chr1_2:58328911-58328930 Msa0080100:CDS 45.0%
GCTCTTCACGTTAAATGCTC+AGG + chr1_2:58328972-58328991 Msa0080100:CDS 45.0%
TAGAAATCCGACTTCACTCC+TGG - chr1_2:58329015-58329034 Msa0080090:three_prime_UTR 45.0%
GGTAGATCTCCAAAAGACTG+AGG + chr1_2:58329101-58329120 Msa0080100:three_prime_UTR 45.0%
ATCTCCAAAAGACTGAGGCT+AGG + chr1_2:58329106-58329125 Msa0080100:three_prime_UTR 45.0%
CTTGGTGGAGAGATTGGATA+TGG - chr1_2:58329661-58329680 Msa0080090:CDS 45.0%
AAATGGGACAGAACACAGAG+AGG + chr1_2:58329744-58329763 Msa0080100:three_prime_UTR 45.0%
ACAGAACACAGAGAGGCAAT+GGG + chr1_2:58329751-58329770 Msa0080100:three_prime_UTR 45.0%
!! ATTCATATTATAAATTATAT+TGG + chr1_2:58330479-58330498 Msa0080100:three_prime_UTR 5.0%
! TGCAAACGAGGTTTGGAGCA+TGG + chr1_2:58327968-58327987 Msa0080100:CDS 50.0%
TTCTTGGCCAATTCCTCAGC+AGG - chr1_2:58328075-58328094 Msa0080090:three_prime_UTR 50.0%
TGGCCAAGAAATTTGAGCGG+CGG + chr1_2:58328085-58328104 Msa0080100:CDS 50.0%
AAGCCGCCGCTCAAATTTCT+TGG - chr1_2:58328091-58328110 Msa0080090:three_prime_UTR 50.0%
GTAACGTGTGTAGCCTCCTA+TGG - chr1_2:58328235-58328254 Msa0080090:three_prime_UTR 50.0%
GATCTCCAACCCAATTCACC+GGG - chr1_2:58328412-58328431 Msa0080090:three_prime_UTR 50.0%
GAACGTGGCCGTAAATTCAG+TGG - chr1_2:58328494-58328513 Msa0080090:three_prime_UTR 50.0%
TGAGTTCACCATTGGAACCC+GGG - chr1_2:58328550-58328569 Msa0080090:three_prime_UTR 50.0%
! ACGAGAAGTCTAGAGCAACG+GGG - chr1_2:58328592-58328611 Msa0080090:intron 50.0%
! TGAAGCATTTGGAAGCCCTG+AGG + chr1_2:58328759-58328778 Msa0080100:CDS 50.0%
AGGTGGGGGAAGCTGTAATT+CGG + chr1_2:58328782-58328801 Msa0080100:CDS 50.0%
TTCGGACCATAACAGGATCC+GGG + chr1_2:58328800-58328819 Msa0080100:CDS 50.0%
GCCAGATGTGAAGGGAACAT+TGG + chr1_2:58328828-58328847 Msa0080100:CDS 50.0%
ACATTGTGTCGCCCAAACGA+AGG - chr1_2:58328925-58328944 Msa0080090:three_prime_UTR 50.0%
GTTTGTGTCTGTTGTGCTCG+TGG + chr1_2:58328943-58328962 Msa0080100:CDS 50.0%
TCCAATCTCTCCACCAAGTC+TGG + chr1_2:58329663-58329682 Msa0080100:three_prime_UTR 50.0%
!! ACCAGACTTGGTGGAGAGAT+TGG - chr1_2:58329667-58329686 Msa0080090:intron 50.0%
GACAGAACACAGAGAGGCAA+TGG + chr1_2:58329750-58329769 Msa0080100:three_prime_UTR 50.0%
AGAGGCTGTAAGATTGGCAG+AGG - chr1_2:58330110-58330129 Msa0080090:CDS 50.0%
ATCAAGGGCCAACTGAACAG+TGG + chr1_2:58330153-58330172 Msa0080100:three_prime_UTR 50.0%
TGCAACTGCGACTGCAAACG+AGG + chr1_2:58327956-58327975 Msa0080100:CDS 55.0%
CTGCGACTGCAAACGAGGTT+TGG + chr1_2:58327961-58327980 Msa0080100:CDS 55.0%
AGTAGTGTGGTCTCCTGCTG+AGG + chr1_2:58328059-58328078 Msa0080100:CDS 55.0%
GTGGTCTCCTGCTGAGGAAT+TGG + chr1_2:58328065-58328084 Msa0080100:CDS 55.0%
ATTTGAGCGGCGGCTTCTTG+TGG + chr1_2:58328095-58328114 Msa0080100:CDS 55.0%
TTTGAGCGGCGGCTTCTTGT+GGG + chr1_2:58328096-58328115 Msa0080100:CDS 55.0%
GGCCGTAAATTCAGTGGAGG+AGG - chr1_2:58328488-58328507 Msa0080090:three_prime_UTR 55.0%
CGTGGCCGTAAATTCAGTGG+AGG - chr1_2:58328491-58328510 Msa0080090:three_prime_UTR 55.0%
AGTTGTCGCATTTGGTCCCC+CGG + chr1_2:58328529-58328548 Msa0080100:CDS 55.0%
AGTTCACCATTGGAACCCGG+GGG - chr1_2:58328548-58328567 Msa0080090:three_prime_UTR 55.0%
GAGTTCACCATTGGAACCCG+GGG - chr1_2:58328549-58328568 Msa0080090:three_prime_UTR 55.0%
! CGAGAAGTCTAGAGCAACGG+GGG - chr1_2:58328591-58328610 Msa0080090:intron 55.0%
AGCATTTGGAAGCCCTGAGG+AGG + chr1_2:58328762-58328781 Msa0080100:CDS 55.0%
ATTTGGAAGCCCTGAGGAGG+TGG + chr1_2:58328765-58328784 Msa0080100:CDS 55.0%
TTTGGAAGCCCTGAGGAGGT+GGG + chr1_2:58328766-58328785 Msa0080100:CDS 55.0%
CCATAACAGGATCCGGGCAA+CGG + chr1_2:58328806-58328825 Msa0080100:CDS 55.0%
TGTGTCTGTTGTGCTCGTGG+TGG + chr1_2:58328946-58328965 Msa0080100:CDS 55.0%
GTGTCTGTTGTGCTCGTGGT+GGG + chr1_2:58328947-58328966 Msa0080100:CDS 55.0%
! AGGGCCTAGCCTCAGTCTTT+TGG - chr1_2:58329113-58329132 Msa0080090:three_prime_UTR 55.0%
AAAAGACTGAGGCTAGGCCC+TGG + chr1_2:58329112-58329131 Msa0080100:three_prime_UTR 55.0%
AAAGACTGAGGCTAGGCCCT+GGG + chr1_2:58329113-58329132 Msa0080100:three_prime_UTR 55.0%
GCTCAGAATTGGCATCAGCC+AGG - chr1_2:58329277-58329296 Msa0080090:three_prime_UTR 55.0%
GAACACAGAGAGGCAATGGG+CGG + chr1_2:58329754-58329773 Msa0080100:three_prime_UTR 55.0%
AACACAGAGAGGCAATGGGC+GGG + chr1_2:58329755-58329774 Msa0080100:three_prime_UTR 55.0%
GGCTGTAAGATTGGCAGAGG+AGG - chr1_2:58330107-58330126 Msa0080090:CDS 55.0%
CCTGGGAGAGGCTGTAAGAT+TGG - chr1_2:58330116-58330135 Msa0080090:CDS 55.0%
CCAATCTTACAGCCTCTCCC+AGG + chr1_2:58330113-58330132 Msa0080100:three_prime_UTR 55.0%
ATCTCCTGAAAGCCTGGGAG+AGG - chr1_2:58330128-58330147 Msa0080090:CDS 55.0%
CGGCGGCTTCTTGTGGGAAT+AGG + chr1_2:58328102-58328121 Msa0080100:CDS 60.0%
GGGGGACCAAATGCGACAAC+TGG - chr1_2:58328530-58328549 Msa0080090:three_prime_UTR 60.0%
GTTGTCGCATTTGGTCCCCC+GGG + chr1_2:58328530-58328549 Msa0080100:CDS 60.0%
TTTGGTCCCCCGGGTTCCAA+TGG + chr1_2:58328539-58328558 Msa0080100:CDS 60.0%
TTGGAAGCCCTGAGGAGGTG+GGG + chr1_2:58328767-58328786 Msa0080100:CDS 60.0%
CCGTTGCCCGGATCCTGTTA+TGG - chr1_2:58328809-58328828 Msa0080090:three_prime_UTR 60.0%
CTTCACATCTGGCCGTTGCC+CGG - chr1_2:58328821-58328840 Msa0080090:three_prime_UTR 60.0%
GGGCAACGGCCAGATGTGAA+GGG + chr1_2:58328820-58328839 Msa0080100:CDS 60.0%
! TCTGTTGTGCTCGTGGTGGG+AGG + chr1_2:58328950-58328969 Msa0080100:CDS 60.0%
CTCAGGCACCTGAATCAGCC+TGG + chr1_2:58328989-58329008 Msa0080100:CDS 60.0%
! ACTCCTGGCCAGGCTGATTC+AGG - chr1_2:58329000-58329019 Msa0080090:three_prime_UTR 60.0%
AGCCTGGCCAGGAGTGAAGT+CGG + chr1_2:58329005-58329024 Msa0080100:CDS 60.0%
ATCCGACTTCACTCCTGGCC+AGG - chr1_2:58329010-58329029 Msa0080090:three_prime_UTR 60.0%
AGAGGCAATGGGCGGGTAGT+GGG + chr1_2:58329762-58329781 Msa0080100:three_prime_UTR 60.0%
ACAGCCTCTCCCAGGCTTTC+AGG + chr1_2:58330121-58330140 Msa0080100:three_prime_UTR 60.0%
TGGAAGCCCTGAGGAGGTGG+GGG + chr1_2:58328768-58328787 Msa0080100:CDS 65.0%
CAGCTTCCCCCACCTCCTCA+GGG - chr1_2:58328777-58328796 Msa0080090:three_prime_UTR 65.0%
ACAGCTTCCCCCACCTCCTC+AGG - chr1_2:58328778-58328797 Msa0080090:three_prime_UTR 65.0%
CGGGCAACGGCCAGATGTGA+AGG + chr1_2:58328819-58328838 Msa0080100:CDS 65.0%
GCACCTGAATCAGCCTGGCC+AGG + chr1_2:58328994-58329013 Msa0080100:CDS 65.0%
GAGAGGCAATGGGCGGGTAG+TGG + chr1_2:58329761-58329780 Msa0080100:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 58327826 58330549 58327826 ID=Msa0080100;Name=Msa0080100
chr1_2 mRNA 58327826 58330549 58327826 ID=Msa0080100-mRNA-1;Parent=Msa0080100;Name=Msa0080100-mRNA-1;_AED=0.25;_eAED=0.25;_QI=123|1|1|1|1|1|3|1481|283
chr1_2 exon 58327826 58328276 58327826 ID=Msa0080100-mRNA-1:exon:18635;Parent=Msa0080100-mRNA-1
chr1_2 exon 58328399 58328609 58328399 ID=Msa0080100-mRNA-1:exon:18636;Parent=Msa0080100-mRNA-1
chr1_2 exon 58328756 58330549 58328756 ID=Msa0080100-mRNA-1:exon:18637;Parent=Msa0080100-mRNA-1
chr1_2 five_prime_UTR 58327826 58327948 58327826 ID=Msa0080100-mRNA-1:five_prime_utr;Parent=Msa0080100-mRNA-1
chr1_2 CDS 58327949 58328276 58327949 ID=Msa0080100-mRNA-1:cds;Parent=Msa0080100-mRNA-1
chr1_2 CDS 58328399 58328609 58328399 ID=Msa0080100-mRNA-1:cds;Parent=Msa0080100-mRNA-1
chr1_2 CDS 58328756 58329068 58328756 ID=Msa0080100-mRNA-1:cds;Parent=Msa0080100-mRNA-1
chr1_2 three_prime_UTR 58329069 58330549 58329069 ID=Msa0080100-mRNA-1:three_prime_utr;Parent=Msa0080100-mRNA-1
Gene Sequence

>Msa0080100

ATGGCAGTGCAACTGCGACTGCAAACGAGGTTTGGAGCATGGAACAGAAATTGCATTGGTGTAACACGATGTTCGAGTGATAGAGAAGAAAAATTGAAAGTTAAAGAAGCAGTAGTGTGGTCTCCTGCTGAGGAATTGGCCAAGAAATTTGAGCGGCGGCTTCTTGTGGGAATAGGTTCAGCTTCACTTGTAGCCTTAGGTGCAAATTTTGGTGGCATCACTAGTTTTTTTCTTGGTTTGTCACCACAGAATGGTCGTAAACTGAAGCTAGATGTGCTTTATCCCATAGGAGGCTACACACGTTACATTGACACAAGAGAGGGGTTCGAATTTATATACCCGGTGAATTGGGTTGGAGATCAGACACTGCTGTATCGAGCTGCTAAAAGAAGAGAAATGGAACTATCATTGGATCCTCCTCCACTGAATTTACGGCCACGTTCTAATGTCAATGAACCAGTTGTCGCATTTGGTCCCCCGGGTTCCAATGGTGAACTCAATGTCAGTGTTATTGTTTCCCCCGTTGCTCTAGACTTCTCGATTGAAGCATTTGGAAGCCCTGAGGAGGTGGGGGAAGCTGTAATTCGGACCATAACAGGATCCGGGCAACGGCCAGATGTGAAGGGAACATTGGTAAAATCAAGTTTGAGAGAGGATACTGTTAGAAATGCCAAATACTACGAGCTGGAATTCAGAGTTGAGAGTCCTTCGTTTGGGCGACACAATGTTTGTGTCTGTTGTGCTCGTGGTGGGAGGCTCTTCACGTTAAATGCTCAGGCACCTGAATCAGCCTGGCCAGGAGTGAAGTCGGATTTCTATACAATTGCAGATTCATTCAATCTCACAACTTAG

Protein sequence

>Msa0080100

MAVQLRLQTRFGAWNRNCIGVTRCSSDREEKLKVKEAVVWSPAEELAKKFERRLLVGIGSASLVALGANFGGITSFFLGLSPQNGRKLKLDVLYPIGGYTRYIDTREGFEFIYPVNWVGDQTLLYRAAKRREMELSLDPPPLNLRPRSNVNEPVVAFGPPGSNGELNVSVIVSPVALDFSIEAFGSPEEVGEAVIRTITGSGQRPDVKGTLVKSSLREDTVRNAKYYELEFRVESPSFGRHNVCVCCARGGRLFTLNAQAPESAWPGVKSDFYTIADSFNLTT*