AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0062160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0062160 MtrunA17_Chr1g0162441 95.642 436 16 2 1 436 1 433 0.0 837
Msa0062160 MtrunA17_Chr4g0033961 60.364 439 158 8 3 436 2 429 0.0 520
Msa0062160 MtrunA17_Chr1g0162411 49.645 423 121 14 1 363 1 391 3.63e-108 327
Msa0062160 MtrunA17_Chr1g0162421 89.655 58 6 0 21 78 7 64 2.15e-31 114
Msa0062160 MtrunA17_Chr1g0162431 83.333 54 9 0 348 401 5 58 2.90e-25 98.2
Msa0062160 MtrunA17_Chr5g0429931 50.000 84 42 0 22 105 10 93 5.51e-24 100
Msa0062160 MtrunA17_Chr5g0429931 30.387 181 93 6 221 395 89 242 1.74e-11 64.3
Msa0062160 MtrunA17_Chr3g0077461 44.444 99 55 0 7 105 237 335 5.55e-24 103
Msa0062160 MtrunA17_Chr3g0077461 44.681 94 51 1 22 115 22 114 1.19e-19 90.9
Msa0062160 MtrunA17_Chr4g0009491 45.455 99 54 0 7 105 225 323 5.62e-24 103
Msa0062160 MtrunA17_Chr4g0009491 41.176 85 50 0 21 105 11 95 2.90e-17 83.6
Msa0062160 MtrunA17_Chr3g0077411 44.037 109 60 1 7 115 25 132 7.32e-24 103
Msa0062160 MtrunA17_Chr3g0077411 46.000 100 53 1 7 105 262 361 9.33e-24 103
Msa0062160 MtrunA17_Chr3g0077451 48.235 85 44 0 21 105 10 94 1.28e-23 99.0
Msa0062160 MtrunA17_Chr7g0233571 42.857 105 60 0 3 107 6 110 2.26e-22 95.1
Msa0062160 MtrunA17_Chr3g0103151 36.170 141 80 2 7 147 12 142 2.51e-22 93.2
Msa0062160 MtrunA17_Chr3g0077381 44.444 99 55 0 7 105 247 345 3.49e-22 98.6
Msa0062160 MtrunA17_Chr3g0077381 44.706 85 47 0 21 105 34 118 7.37e-20 91.7
Msa0062160 MtrunA17_Chr7g0233561 44.444 99 55 0 7 105 18 116 7.54e-22 95.9
Msa0062160 MtrunA17_Chr3g0103181 42.424 99 55 1 7 105 12 108 2.22e-21 93.6
Msa0062160 MtrunA17_Chr3g0077361 38.793 116 65 2 7 116 40 155 3.50e-21 95.9
Msa0062160 MtrunA17_Chr3g0077361 43.662 71 40 0 7 77 289 359 1.16e-15 79.0
Msa0062160 MtrunA17_Chr3g0077361 34.848 132 72 5 268 395 380 501 1.62e-12 69.3
Msa0062160 MtrunA17_Chr3g0103191 40.741 108 60 2 1 108 8 111 7.37e-21 91.7
Msa0062160 MtrunA17_Chr5g0419201 39.604 101 61 0 7 107 16 116 1.60e-20 89.0
Msa0062160 MtrunA17_Chr3g0131891 41.414 99 58 0 7 105 19 117 4.46e-20 90.9
Msa0062160 MtrunA17_Chr3g0131891 27.751 209 121 7 209 395 103 303 1.91e-14 74.3
Msa0062160 MtrunA17_Chr7g0233541 44.578 83 46 0 23 105 2 84 1.35e-19 89.0
Msa0062160 MtrunA17_Chr8g0390841 41.000 100 59 0 7 106 39 138 2.39e-19 90.5
Msa0062160 MtrunA17_Chr8g0390841 28.750 160 100 5 243 401 191 337 2.43e-14 75.1
Msa0062160 MtrunA17_Chr1g0163071 36.585 123 65 2 23 142 2 114 8.83e-19 86.7
Msa0062160 MtrunA17_Chr1g0163071 34.513 113 66 2 287 399 187 291 1.37e-13 71.2
Msa0062160 MtrunA17_Chr7g0233531 41.837 98 54 1 23 120 2 96 1.89e-18 85.1
Msa0062160 MtrunA17_Chr1g0154041 23.750 400 242 12 4 399 13 353 2.23e-18 87.8
Msa0062160 MtrunA17_Chr7g0233521 42.169 83 48 0 23 105 2 84 8.96e-18 83.2
Msa0062160 MtrunA17_Chr3g0103171 38.710 93 57 0 22 114 5 97 1.13e-17 82.8
Msa0062160 MtrunA17_Chr1g0154111 23.810 378 224 11 19 391 38 356 2.44e-15 78.2
Msa0062160 MtrunA17_Chr1g0208771 36.364 121 62 3 22 142 12 117 2.00e-14 75.1
Msa0062160 MtrunA17_Chr1g0208771 34.091 132 74 5 274 403 178 298 4.21e-14 73.9
Msa0062160 MtrunA17_Chr1g0163191 34.234 111 66 3 5 115 7 110 9.79e-13 65.9
Msa0062160 MtrunA17_Chr1g0154161 44.304 79 44 0 19 97 42 120 1.76e-12 68.2
Msa0062160 MtrunA17_Chr3g0077421 36.232 138 70 6 267 396 70 197 3.15e-12 65.5
Msa0062160 MtrunA17_Chr3g0077421 41.667 72 41 1 51 122 1 71 8.24e-11 61.2
Msa0062160 MtrunA17_Chr3g0077441 36.232 138 70 6 267 396 70 197 3.15e-12 65.5
Msa0062160 MtrunA17_Chr3g0077441 41.667 72 41 1 51 122 1 71 8.24e-11 61.2
Msa0062160 MtrunA17_Chr1g0154101 37.931 87 53 1 11 97 187 272 9.91e-12 67.0
Msa0062160 MtrunA17_Chr1g0154101 41.772 79 46 0 19 97 37 115 4.68e-11 65.1
Msa0062160 MtrunA17_Chr1g0154211 41.772 79 46 0 19 97 34 112 1.43e-11 65.9
Msa0062160 MtrunA17_Chr1g0154131 39.560 91 54 1 7 97 26 115 1.69e-11 65.9
Msa0062160 MtrunA17_Chr1g0154131 40.506 79 47 0 19 97 194 272 3.17e-11 65.1
Msa0062160 MtrunA17_Chr1g0154171 41.772 79 46 0 19 97 34 112 3.97e-11 64.3
Msa0062160 MtrunA17_Chr1g0163181 33.663 101 61 2 5 105 7 101 4.09e-11 64.7
Msa0062160 MtrunA17_Chr6g0467351 32.727 110 71 2 7 115 15 122 5.25e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0062160 AT3G18990.1 48.363 397 145 9 3 398 2 339 1.76e-116 344
Msa0062160 AT3G18990.2 48.111 397 146 9 3 398 2 339 2.84e-115 342
Msa0062160 AT1G49480.3 63.804 163 54 4 237 398 66 224 5.71e-64 206
Msa0062160 AT1G49480.1 63.804 163 54 4 237 398 66 224 5.71e-64 206
Msa0062160 AT1G49480.2 63.804 163 54 4 237 398 66 224 5.71e-64 206
Msa0062160 AT4G01580.1 42.718 103 59 0 3 105 26 128 4.73e-24 99.4
Msa0062160 AT3G18960.2 40.777 103 61 0 3 105 26 128 8.44e-23 95.9
Msa0062160 AT3G18960.1 40.777 103 61 0 3 105 26 128 9.17e-23 96.3
Msa0062160 AT1G49475.1 35.849 106 64 2 3 105 27 131 6.73e-17 79.0
Msa0062160 AT3G18960.3 41.667 84 49 0 22 105 8 91 1.27e-16 77.8

Find 106 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACATTAGAGAACAATTT+AGG 0.133108 1_2:+21329702 Msa0062160:CDS
AAGAATTTGAACGGTGTTTC+AGG 0.187714 1_2:+21329585 Msa0062160:CDS
AAAAGGTTGACAACCGAATT+TGG 0.209979 1_2:+21328415 Msa0062160:CDS
TCATTGCAGAATTTGTTTAA+TGG 0.251640 1_2:+21328762 Msa0062160:CDS
CTAAACTCAACCACGTTAAC+TGG 0.274983 1_2:+21328790 Msa0062160:CDS
CATTGCAGAATTTGTTTAAT+GGG 0.276665 1_2:+21328763 Msa0062160:CDS
TTATTAACCCCTTCCTCATT+AGG 0.282526 1_2:-21328930 None:intergenic
TATCGACTCCTTTGAATTCC+TGG 0.294296 1_2:+21328644 Msa0062160:CDS
TATTTCCTAAGAAAATTATC+TGG 0.317191 1_2:-21328324 None:intergenic
AGACTCATGAACTTAAAATT+AGG 0.331687 1_2:+21326300 Msa0062160:five_prime_UTR
TTACATTAGAGAACAATTTA+GGG 0.336001 1_2:+21329703 Msa0062160:CDS
AGAGATTCAAAGCATAATCT+TGG 0.363466 1_2:-21326487 None:intergenic
CAAAGCAGGAAGGCAAATAC+TGG 0.378699 1_2:-21329557 None:intergenic
ATCCTTGGCTTAACTTTGCT+CGG 0.390374 1_2:-21329671 None:intergenic
CGTGTAAAAGAGGACGAGTC+AGG 0.395227 1_2:+21329792 Msa0062160:CDS
TTACCAATTGTCTAGTTTGA+AGG 0.397207 1_2:-21326569 None:intergenic
ATCCCTTCAAACTAGACAAT+TGG 0.398966 1_2:+21326566 Msa0062160:CDS
TTGCTCGGCCTCCTTTATAT+AGG 0.399413 1_2:-21329656 None:intergenic
CTGGCGTCTAGGATTGAAAA+AGG 0.407049 1_2:+21328398 Msa0062160:CDS
TTACTCAGATCTAAATTGTT+GGG 0.408825 1_2:-21326429 None:intergenic
TTTCTAGTATTCACTTATGA+AGG 0.411457 1_2:+21328492 Msa0062160:CDS
ATTCAGTCAACCAGAGATAT+AGG 0.424869 1_2:+21328849 Msa0062160:CDS
ATTACTCAGATCTAAATTGT+TGG 0.426490 1_2:-21326430 None:intergenic
AGCCATCGACAAACCAAATT+CGG 0.433503 1_2:-21328428 None:intergenic
CTGTTCCTGATGGCACTGTC+TGG 0.439890 1_2:+21328379 Msa0062160:CDS
CTTGCAATGCACCAGGAGTA+AGG 0.441488 1_2:-21328683 None:intergenic
GAATTTGGTTTGTCGATGGC+TGG 0.442071 1_2:+21328430 Msa0062160:CDS
TATATCTCTGGTTGACTGAA+TGG 0.443124 1_2:-21328847 None:intergenic
TTAAACAAATTCTGCAATGA+TGG 0.444180 1_2:-21328759 None:intergenic
CTGAATAGGGTTTGAGGAGA+AGG 0.449747 1_2:+21326396 Msa0062160:five_prime_UTR
TTTGTTCAACGTTACTCCAT+TGG 0.453832 1_2:+21328459 Msa0062160:CDS
CAACGTTACTCCATTGGCAT+TGG 0.459331 1_2:+21328465 Msa0062160:CDS
ATGTAAATTCATACCATCCT+TGG 0.460863 1_2:-21329686 None:intergenic
GATGGCACTGTCTGGCGTCT+AGG 0.462195 1_2:+21328387 Msa0062160:CDS
TGTCTAGTTTGAAGGGATGA+AGG 0.472503 1_2:-21326561 None:intergenic
CCTTTATATAGGCAGCGAAC+AGG 0.472865 1_2:-21329645 None:intergenic
ATTAAGCTTCAGATCTCTGA+TGG 0.476714 1_2:+21329612 Msa0062160:CDS
TACTTTGTTTCGTGTAAAAG+AGG 0.477036 1_2:+21329782 Msa0062160:CDS
AACCAGAGAGGTAGTGCTGC+AGG 0.477376 1_2:+21329758 Msa0062160:CDS
CACGTTAACTGGGGAGATAT+CGG 0.483067 1_2:+21328801 Msa0062160:CDS
GCACCAGGAGTAAGGTTTGA+AGG 0.495370 1_2:-21328675 None:intergenic
GGGTTGCAATAGTCGAAAGC+TGG 0.499258 1_2:-21328353 None:intergenic
CCCTTCAGTACGGCTTCTCA+TGG 0.501141 1_2:-21328577 None:intergenic
TAACAGCAGAAGAAAGAGAA+AGG 0.504497 1_2:+21329357 Msa0062160:CDS
GAACTGAACACCTATATCTC+TGG 0.504709 1_2:-21328859 None:intergenic
AACCTGCAGCACTACCTCTC+TGG 0.506330 1_2:-21329760 None:intergenic
ACTCTACAGAATGGATTGGT+TGG 0.509007 1_2:-21329407 None:intergenic
TAAACTCAACCACGTTAACT+GGG 0.517161 1_2:+21328791 Msa0062160:CDS
TACCAATTGTCTAGTTTGAA+GGG 0.519590 1_2:-21326568 None:intergenic
CCTGTTCGCTGCCTATATAA+AGG 0.526982 1_2:+21329645 Msa0062160:CDS
TCACCTTCAAACCTTACTCC+TGG 0.530653 1_2:+21328672 Msa0062160:CDS
CATAGCAAGGCCCTTCAGTA+CGG 0.538460 1_2:-21328587 None:intergenic
AGACGCCAGACAGTGCCATC+AGG 0.540335 1_2:-21328384 None:intergenic
AACAGCAGAAGAAAGAGAAA+GGG 0.540440 1_2:+21329358 Msa0062160:CDS
GTCTAGTTTGAAGGGATGAA+GGG 0.543517 1_2:-21326560 None:intergenic
GGTTTGAAGGTGATGAATCC+AGG 0.544026 1_2:-21328662 None:intergenic
GGATGATAATTTGCATAGCA+AGG 0.545527 1_2:-21328600 None:intergenic
AGAATGAGCTTGTGAAAAGA+AGG 0.547922 1_2:-21326537 None:intergenic
ATTGCAGAATTTGTTTAATG+GGG 0.548631 1_2:+21328764 Msa0062160:CDS
TCCTGGTGCATTGCAAGACA+AGG 0.548892 1_2:+21328689 Msa0062160:CDS
ACCTTGTCTTGCAATGCACC+AGG 0.549286 1_2:-21328690 None:intergenic
ATTCAAAGCATAATCTTGGA+AGG 0.549766 1_2:-21326483 None:intergenic
TTGTGTAACTGTAGGTGCAC+TGG 0.551946 1_2:+21329259 Msa0062160:intron
TGATTGAAAGTTGAAAACTT+TGG 0.552047 1_2:-21326457 None:intergenic
GCCATGAGAAGCCGTACTGA+AGG 0.554864 1_2:+21328576 Msa0062160:CDS
CTGACACGGTGCTGCAAGTG+AGG 0.554904 1_2:-21329873 None:intergenic
TTGCGCTATCCTAATGAGGA+AGG 0.562431 1_2:+21328921 Msa0062160:CDS
CTGATTTGGTTGAGCTGACA+CGG 0.566401 1_2:-21329887 None:intergenic
TTAGAGAACAATTTAGGGGA+AGG 0.568521 1_2:+21329708 Msa0062160:CDS
GGCCGAGCAAAGTTAAGCCA+AGG 0.570951 1_2:+21329669 Msa0062160:CDS
AACCGAATTTGGTTTGTCGA+TGG 0.576855 1_2:+21328426 Msa0062160:CDS
TGCAGAATTTGTTTAATGGG+GGG 0.577486 1_2:+21328766 Msa0062160:CDS
TTGCAGAATTTGTTTAATGG+GGG 0.578544 1_2:+21328765 Msa0062160:CDS
TGCGCTATCCTAATGAGGAA+GGG 0.580496 1_2:+21328922 Msa0062160:CDS
GAAATTGCGCTATCCTAATG+AGG 0.581484 1_2:+21328917 Msa0062160:CDS
TTTGCAGAAAAGAATTTGAA+CGG 0.582980 1_2:+21329576 Msa0062160:CDS
GGTTGCAATAGTCGAAAGCT+GGG 0.584695 1_2:-21328352 None:intergenic
TGATGAATCCAGGAATTCAA+AGG 0.585718 1_2:-21328652 None:intergenic
GCGCTATCCTAATGAGGAAG+GGG 0.586754 1_2:+21328923 Msa0062160:CDS
GACAACTCTACAGAATGGAT+TGG 0.593488 1_2:-21329411 None:intergenic
TTTGGCTTGGCTGTGAAGAA+GGG 0.594915 1_2:-21329824 None:intergenic
CGATATCTCCCCAGTTAACG+TGG 0.595115 1_2:-21328800 None:intergenic
TAGAAAGTATCCAATGCCAA+TGG 0.595339 1_2:-21328475 None:intergenic
CACTGCTGAAAATGATGAGG+AGG 0.595680 1_2:+21329286 Msa0062160:CDS
CGCAGGACAACTCTACAGAA+TGG 0.599765 1_2:-21329416 None:intergenic
GCAACCCTCACTGTTCCTGA+TGG 0.602871 1_2:+21328369 Msa0062160:CDS
TTAAGCTTCAGATCTCTGAT+GGG 0.604595 1_2:+21329613 Msa0062160:CDS
AGAAAACTTCAAGAAAGAAG+CGG 0.610439 1_2:+21328964 Msa0062160:CDS
GCGCAATTTCAATCCTTCAG+TGG 0.610517 1_2:-21328904 None:intergenic
GATGGAGTATGATTCTTCGC+TGG 0.611475 1_2:-21328741 None:intergenic
CCATGAGAAGCCGTACTGAA+GGG 0.612450 1_2:+21328577 Msa0062160:CDS
AGATCTCTGATGGGAGACAG+TGG 0.629937 1_2:+21329622 Msa0062160:CDS
TACATTAGAGAACAATTTAG+GGG 0.630150 1_2:+21329704 Msa0062160:CDS
GTGTAAAAGAGGACGAGTCA+GGG 0.630504 1_2:+21329793 Msa0062160:CDS
GAGCAAAGTTAAGCCAAGGA+TGG 0.643193 1_2:+21329673 Msa0062160:CDS
AAGTTCATGAGTCTATCACT+CGG 0.644235 1_2:-21326291 None:intergenic
TGACACGGTGCTGCAAGTGA+GGG 0.655075 1_2:-21329872 None:intergenic
GTTCGCTGCCTATATAAAGG+AGG 0.657822 1_2:+21329648 Msa0062160:CDS
AGTGCCATCAGGAACAGTGA+GGG 0.674235 1_2:-21328373 None:intergenic
TGAGCTGCTTAGAACCAGAG+AGG 0.682743 1_2:+21329746 Msa0062160:CDS
AGCCACTGCTGAAAATGATG+AGG 0.685162 1_2:+21329283 Msa0062160:CDS
CAGTGCCATCAGGAACAGTG+AGG 0.694859 1_2:-21328374 None:intergenic
TTGTGAAAAGAAGGACGAGG+AGG 0.697547 1_2:-21326528 None:intergenic
AGCTTGTGAAAAGAAGGACG+AGG 0.710821 1_2:-21326531 None:intergenic
AAACTCAACCACGTTAACTG+GGG 0.714026 1_2:+21328792 Msa0062160:CDS
GTTAACTGGGGAGATATCGG+TGG 0.726802 1_2:+21328804 Msa0062160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATTATTAAATAAAT+TGG - chr1_2:21328055-21328074 None:intergenic 0.0%
!!! TTTTTTGTTTGTTTAATTTA+AGG + chr1_2:21326346-21326365 Msa0062160:five_prime_UTR 10.0%
!!! TCATTGATTTTTTTTTGAAT+TGG + chr1_2:21326610-21326629 Msa0062160:intron 15.0%
!!! CATTGATTTTTTTTTGAATT+GGG + chr1_2:21326611-21326630 Msa0062160:intron 15.0%
!! ATCCAAACTTTATAAAAAAA+GGG - chr1_2:21326757-21326776 None:intergenic 15.0%
!! AATCCAAACTTTATAAAAAA+AGG - chr1_2:21326758-21326777 None:intergenic 15.0%
!!! TATAAAGTTTGGATTTTTTT+AGG + chr1_2:21326763-21326782 Msa0062160:intron 15.0%
!!! CACATATATTAATGATTTTA+AGG - chr1_2:21327114-21327133 None:intergenic 15.0%
!! CTTAAAATCATTAATATATG+TGG + chr1_2:21327112-21327131 Msa0062160:intron 15.0%
!!! TCTTTTGATCTTTTTAATTT+TGG + chr1_2:21327673-21327692 Msa0062160:intron 15.0%
!!! CTTTTTAATTTTGGTAAAAA+AGG + chr1_2:21327682-21327701 Msa0062160:intron 15.0%
!!! TATGAATTTAAGTTTACATA+AGG + chr1_2:21328119-21328138 Msa0062160:intron 15.0%
!!! ATAATTTTCTTAGGAAATAT+GGG + chr1_2:21328328-21328347 Msa0062160:CDS 15.0%
!! TTATGATTGTTGTAAGAAAA+GGG + chr1_2:21326670-21326689 Msa0062160:intron 20.0%
!! TCCAAACTTTATAAAAAAAG+GGG - chr1_2:21326756-21326775 None:intergenic 20.0%
!! TTTAATTGAGACTATCATAT+TGG + chr1_2:21327268-21327287 Msa0062160:intron 20.0%
!!! AAGCATAAAAGTATTTTTGT+TGG - chr1_2:21328100-21328119 None:intergenic 20.0%
!! TTATGAGCATTACTAATATT+TGG + chr1_2:21328269-21328288 Msa0062160:intron 20.0%
!! TATTTCCTAAGAAAATTATC+TGG - chr1_2:21328327-21328346 None:intergenic 20.0%
!!! GATAATTTTCTTAGGAAATA+TGG + chr1_2:21328327-21328346 Msa0062160:CDS 20.0%
!!! TAATTTTCTTAGGAAATATG+GGG + chr1_2:21328329-21328348 Msa0062160:CDS 20.0%
!!! AATTTAATTTGTGTAACTGT+AGG + chr1_2:21329251-21329270 Msa0062160:intron 20.0%
!! TTTATATAGAGGATGTATAA+TGG + chr1_2:21329448-21329467 Msa0062160:intron 20.0%
!! TTTACATTAGAGAACAATTT+AGG + chr1_2:21329702-21329721 Msa0062160:CDS 20.0%
!! TTACATTAGAGAACAATTTA+GGG + chr1_2:21329703-21329722 Msa0062160:CDS 20.0%
! AGACTCATGAACTTAAAATT+AGG + chr1_2:21326300-21326319 Msa0062160:five_prime_UTR 25.0%
! TTTGACTAAAAAGCTGAATA+GGG + chr1_2:21326383-21326402 Msa0062160:five_prime_UTR 25.0%
! TTACTCAGATCTAAATTGTT+GGG - chr1_2:21326432-21326451 None:intergenic 25.0%
! ATTACTCAGATCTAAATTGT+TGG - chr1_2:21326433-21326452 None:intergenic 25.0%
! TGATTGAAAGTTGAAAACTT+TGG - chr1_2:21326460-21326479 None:intergenic 25.0%
!!! TTGTGTTTCATGTTTTTGAT+TGG + chr1_2:21326635-21326654 Msa0062160:intron 25.0%
! GTTATGATTGTTGTAAGAAA+AGG + chr1_2:21326669-21326688 Msa0062160:intron 25.0%
!! TTGTAAGAAAAGGGTTTTTA+GGG + chr1_2:21326679-21326698 Msa0062160:intron 25.0%
!!! TTATAAAAAAAGGGGTATCA+GGG - chr1_2:21326748-21326767 None:intergenic 25.0%
!!! TTTATAAAAAAAGGGGTATC+AGG - chr1_2:21326749-21326768 None:intergenic 25.0%
!!! ACCCCTTTTTTTATAAAGTT+TGG + chr1_2:21326752-21326771 Msa0062160:intron 25.0%
!!! TTTAGGTTTTGTGATTTTTC+TGG + chr1_2:21326911-21326930 Msa0062160:intron 25.0%
!!! TGTTGAAATTTTGATAAACC+TGG + chr1_2:21326938-21326957 Msa0062160:intron 25.0%
!! TTTTAGCCCTAAAATTGAAT+TGG + chr1_2:21326973-21326992 Msa0062160:intron 25.0%
!! AACCAACCAATTCAATTTTA+GGG - chr1_2:21326982-21327001 None:intergenic 25.0%
!! TAACCAACCAATTCAATTTT+AGG - chr1_2:21326983-21327002 None:intergenic 25.0%
! AGTCTCAATTAAAACACATT+TGG - chr1_2:21327261-21327280 None:intergenic 25.0%
! AAAAGATCAAAAGAAGTTCA+AGG - chr1_2:21327667-21327686 None:intergenic 25.0%
! AAAACCTCTTCTATTAAGTA+TGG + chr1_2:21327742-21327761 Msa0062160:intron 25.0%
! TTCTATTAAGTATGGAAAGT+TGG + chr1_2:21327750-21327769 Msa0062160:intron 25.0%
! AAAAACTACTCATTTCCAAA+TGG - chr1_2:21327793-21327812 None:intergenic 25.0%
! ATTAACTACCATGCTAAAAA+CGG - chr1_2:21327830-21327849 None:intergenic 25.0%
! ATAAACATGGAATCATAACA+CGG - chr1_2:21328190-21328209 None:intergenic 25.0%
! AGACAATGAAATCATAAACA+TGG - chr1_2:21328203-21328222 None:intergenic 25.0%
!!! AATGTTATTTTCAATTGCAG+AGG + chr1_2:21328298-21328317 Msa0062160:intron 25.0%
!! TTTCTAGTATTCACTTATGA+AGG + chr1_2:21328492-21328511 Msa0062160:CDS 25.0%
! TCTTCAATGTCTTCAAAAAT+AGG - chr1_2:21328624-21328643 None:intergenic 25.0%
! TTAAACAAATTCTGCAATGA+TGG - chr1_2:21328762-21328781 None:intergenic 25.0%
!! TCATTGCAGAATTTGTTTAA+TGG + chr1_2:21328762-21328781 Msa0062160:CDS 25.0%
!! CATTGCAGAATTTGTTTAAT+GGG + chr1_2:21328763-21328782 Msa0062160:CDS 25.0%
!! ATTGCAGAATTTGTTTAATG+GGG + chr1_2:21328764-21328783 Msa0062160:CDS 25.0%
! CATCCTCTATATAAATAAGA+GGG - chr1_2:21329443-21329462 None:intergenic 25.0%
! ACATCCTCTATATAAATAAG+AGG - chr1_2:21329444-21329463 None:intergenic 25.0%
! TTTGCAGAAAAGAATTTGAA+CGG + chr1_2:21329576-21329595 Msa0062160:CDS 25.0%
! TACATTAGAGAACAATTTAG+GGG + chr1_2:21329704-21329723 Msa0062160:CDS 25.0%
GTTTGACTAAAAAGCTGAAT+AGG + chr1_2:21326382-21326401 Msa0062160:five_prime_UTR 30.0%
ATTCAAAGCATAATCTTGGA+AGG - chr1_2:21326486-21326505 None:intergenic 30.0%
AGAGATTCAAAGCATAATCT+TGG - chr1_2:21326490-21326509 None:intergenic 30.0%
! TACCAATTGTCTAGTTTGAA+GGG - chr1_2:21326571-21326590 None:intergenic 30.0%
! TTACCAATTGTCTAGTTTGA+AGG - chr1_2:21326572-21326591 None:intergenic 30.0%
! GTTGTAAGAAAAGGGTTTTT+AGG + chr1_2:21326678-21326697 Msa0062160:intron 30.0%
!!! AGGGTTTTGGTTGATTTTTT+AGG + chr1_2:21326698-21326717 Msa0062160:intron 30.0%
!!! GGGTTTTGGTTGATTTTTTA+GGG + chr1_2:21326699-21326718 Msa0062160:intron 30.0%
AACTCAGTGATCAAAATCAT+GGG - chr1_2:21326801-21326820 None:intergenic 30.0%
AAACTCAGTGATCAAAATCA+TGG - chr1_2:21326802-21326821 None:intergenic 30.0%
!! ATGATTTTGATCACTGAGTT+TGG + chr1_2:21326801-21326820 Msa0062160:intron 30.0%
TCTGTTATGATTCTTGATGA+AGG + chr1_2:21326828-21326847 Msa0062160:intron 30.0%
CTGTTATGATTCTTGATGAA+GGG + chr1_2:21326829-21326848 Msa0062160:intron 30.0%
!! TGTTTGATTCAGTGTTGTTT+AGG + chr1_2:21326894-21326913 Msa0062160:intron 30.0%
!! TGATTTTAAGGAAAACATCG+AGG - chr1_2:21327102-21327121 None:intergenic 30.0%
TCTTCTCTTTCACTTAAAAC+AGG - chr1_2:21327197-21327216 None:intergenic 30.0%
TTTAACTACCATGCTGAAAA+TGG - chr1_2:21327414-21327433 None:intergenic 30.0%
! ATTTTCAGTCACTCATTCAA+AGG - chr1_2:21327565-21327584 None:intergenic 30.0%
AAAAGAAGTTCAAGGATTTG+GGG - chr1_2:21327659-21327678 None:intergenic 30.0%
CAAAAGAAGTTCAAGGATTT+GGG - chr1_2:21327660-21327679 None:intergenic 30.0%
TCAAAAGAAGTTCAAGGATT+TGG - chr1_2:21327661-21327680 None:intergenic 30.0%
! GGTTTTTCATTTGCATATCT+AGG - chr1_2:21327728-21327747 None:intergenic 30.0%
CTTTCCATACTTAATAGAAG+AGG - chr1_2:21327749-21327768 None:intergenic 30.0%
! TTTTTAACAGGTCATGTACT+CGG - chr1_2:21327940-21327959 None:intergenic 30.0%
!!! AAAGGTGCGTTTTTTTTAAC+AGG - chr1_2:21327952-21327971 None:intergenic 30.0%
TTTAAACTCGAGATTTGACT+CGG - chr1_2:21328234-21328253 None:intergenic 30.0%
! GGATTCCAGATAATTTTCTT+AGG + chr1_2:21328319-21328338 Msa0062160:CDS 30.0%
! TTGCAGAATTTGTTTAATGG+GGG + chr1_2:21328765-21328784 Msa0062160:CDS 30.0%
AGAAAACTTCAAGAAAGAAG+CGG + chr1_2:21328964-21328983 Msa0062160:CDS 30.0%
CTTATCTAAAAGAGCTTACT+TGG - chr1_2:21328999-21329018 None:intergenic 30.0%
ATGTAAATTCATACCATCCT+TGG - chr1_2:21329689-21329708 None:intergenic 30.0%
! TACTTTGTTTCGTGTAAAAG+AGG + chr1_2:21329782-21329801 Msa0062160:CDS 30.0%
AAGTTCATGAGTCTATCACT+CGG - chr1_2:21326294-21326313 None:intergenic 35.0%
AAAAAGCTGAATAGGGTTTG+AGG + chr1_2:21326390-21326409 Msa0062160:five_prime_UTR 35.0%
AGAATGAGCTTGTGAAAAGA+AGG - chr1_2:21326540-21326559 None:intergenic 35.0%
ATCCCTTCAAACTAGACAAT+TGG + chr1_2:21326566-21326585 Msa0062160:CDS 35.0%
!!! GAAAAGGGTTTTTAGGGTTT+TGG + chr1_2:21326685-21326704 Msa0062160:intron 35.0%
!!! GGTTGATTTTTTAGGGTATG+TGG + chr1_2:21326706-21326725 Msa0062160:intron 35.0%
AGCCCTAAAATTGAATTGGT+TGG + chr1_2:21326977-21326996 Msa0062160:intron 35.0%
!! GTTAGTTTGTTTGTGTCTTG+TGG + chr1_2:21326999-21327018 Msa0062160:intron 35.0%
CACTTAGTAAGTATGACCTT+TGG + chr1_2:21327338-21327357 Msa0062160:intron 35.0%
TACTGGCAATAACAATCCAA+AGG - chr1_2:21327357-21327376 None:intergenic 35.0%
TGTTATTGCCAGTAGCAATT+TGG + chr1_2:21327363-21327382 Msa0062160:intron 35.0%
ACACATTTCCAAATTGCTAC+TGG - chr1_2:21327374-21327393 None:intergenic 35.0%
! ATGAATCTCCATTTTCAGCA+TGG + chr1_2:21327403-21327422 Msa0062160:intron 35.0%
! GGTTTTACATTTGCAGATCT+AGG - chr1_2:21327598-21327617 None:intergenic 35.0%
! AAACCTTTTCTCACCAGAAA+AGG + chr1_2:21327631-21327650 Msa0062160:intron 35.0%
TTGCATATCTAGGAAGTTTG+AGG - chr1_2:21327718-21327737 None:intergenic 35.0%
!!! ATGAATCTCCGTTTTTAGCA+TGG + chr1_2:21327819-21327838 Msa0062160:intron 35.0%
!! AATTGGTTCGACCTAAGTAT+GGG - chr1_2:21328038-21328057 None:intergenic 35.0%
!! AAATTGGTTCGACCTAAGTA+TGG - chr1_2:21328039-21328058 None:intergenic 35.0%
AAAAGGTTGACAACCGAATT+TGG + chr1_2:21328415-21328434 Msa0062160:CDS 35.0%
TTTGTTCAACGTTACTCCAT+TGG + chr1_2:21328459-21328478 Msa0062160:CDS 35.0%
!! TAGAAAGTATCCAATGCCAA+TGG - chr1_2:21328478-21328497 None:intergenic 35.0%
! GGATGATAATTTGCATAGCA+AGG - chr1_2:21328603-21328622 None:intergenic 35.0%
TGATGAATCCAGGAATTCAA+AGG - chr1_2:21328655-21328674 None:intergenic 35.0%
!! TTGCAAGACAAGGTTTTTAG+TGG + chr1_2:21328699-21328718 Msa0062160:CDS 35.0%
!!! CAAGGTTTTTAGTGGATCTT+TGG + chr1_2:21328707-21328726 Msa0062160:CDS 35.0%
! TGCAGAATTTGTTTAATGGG+GGG + chr1_2:21328766-21328785 Msa0062160:CDS 35.0%
TAAACTCAACCACGTTAACT+GGG + chr1_2:21328791-21328810 Msa0062160:CDS 35.0%
TATATCTCTGGTTGACTGAA+TGG - chr1_2:21328850-21328869 None:intergenic 35.0%
ATTCAGTCAACCAGAGATAT+AGG + chr1_2:21328849-21328868 Msa0062160:CDS 35.0%
GAGTTTAAAAAGTCCACTGA+AGG + chr1_2:21328891-21328910 Msa0062160:CDS 35.0%
TTATTAACCCCTTCCTCATT+AGG - chr1_2:21328933-21328952 None:intergenic 35.0%
!! GCACTGACATTTTAGATCAA+AGG + chr1_2:21329048-21329067 Msa0062160:intron 35.0%
!!! TCACCTTTTGAAATGATGAC+CGG + chr1_2:21329146-21329165 Msa0062160:intron 35.0%
TAACAGCAGAAGAAAGAGAA+AGG + chr1_2:21329357-21329376 Msa0062160:CDS 35.0%
AACAGCAGAAGAAAGAGAAA+GGG + chr1_2:21329358-21329377 Msa0062160:CDS 35.0%
GAAATGTCGAAGAAGACTAA+AGG - chr1_2:21329506-21329525 None:intergenic 35.0%
! CAAATTCTTTTCTGCAAAGC+AGG - chr1_2:21329574-21329593 None:intergenic 35.0%
AAGAATTTGAACGGTGTTTC+AGG + chr1_2:21329585-21329604 Msa0062160:CDS 35.0%
ATTAAGCTTCAGATCTCTGA+TGG + chr1_2:21329612-21329631 Msa0062160:CDS 35.0%
TTAAGCTTCAGATCTCTGAT+GGG + chr1_2:21329613-21329632 Msa0062160:CDS 35.0%
TTAGAGAACAATTTAGGGGA+AGG + chr1_2:21329708-21329727 Msa0062160:CDS 35.0%
! TTTTTGCATGGCTCACATTT+TGG - chr1_2:21329845-21329864 None:intergenic 35.0%
! GTCTAGTTTGAAGGGATGAA+GGG - chr1_2:21326563-21326582 None:intergenic 40.0%
! TGTCTAGTTTGAAGGGATGA+AGG - chr1_2:21326564-21326583 None:intergenic 40.0%
CTAAAATCAACTCAGCAACC+AGG - chr1_2:21326959-21326978 None:intergenic 40.0%
ATCTCAAACCTAATCGCAGA+TGG + chr1_2:21327497-21327516 Msa0062160:intron 40.0%
AAATTAACACACACGACCAC+AGG - chr1_2:21327529-21327548 None:intergenic 40.0%
TGGTCGTGTGTGTTAATTTC+AGG + chr1_2:21327530-21327549 Msa0062160:intron 40.0%
!! AAAGGTTTTCTGGTGAGAAG+AGG - chr1_2:21327619-21327638 None:intergenic 40.0%
! TCTGGTGAGAAAAGGTTTTC+TGG - chr1_2:21327629-21327648 None:intergenic 40.0%
CTAGGAAGTTTGAGGATTTG+CGG - chr1_2:21327710-21327729 None:intergenic 40.0%
! GAAAGTTGGATTGCTATTGC+TGG + chr1_2:21327764-21327783 Msa0062160:intron 40.0%
ATATCGCACCTAATCACTGA+TGG + chr1_2:21327908-21327927 Msa0062160:intron 40.0%
GGCAAAAACCATCAGTGATT+AGG - chr1_2:21327919-21327938 None:intergenic 40.0%
CAAGGAAGTTTGAGGATTCT+CGG - chr1_2:21327985-21328004 None:intergenic 40.0%
!! AACCGAATTTGGTTTGTCGA+TGG + chr1_2:21328426-21328445 Msa0062160:CDS 40.0%
AGCCATCGACAAACCAAATT+CGG - chr1_2:21328431-21328450 None:intergenic 40.0%
!! TATCGACTCCTTTGAATTCC+TGG + chr1_2:21328644-21328663 Msa0062160:CDS 40.0%
CTAAACTCAACCACGTTAAC+TGG + chr1_2:21328790-21328809 Msa0062160:CDS 40.0%
AAACTCAACCACGTTAACTG+GGG + chr1_2:21328792-21328811 Msa0062160:CDS 40.0%
GAACTGAACACCTATATCTC+TGG - chr1_2:21328862-21328881 None:intergenic 40.0%
GAAATTGCGCTATCCTAATG+AGG + chr1_2:21328917-21328936 Msa0062160:CDS 40.0%
AATGATGTGTGTCAGACACT+CGG - chr1_2:21329079-21329098 None:intergenic 40.0%
ACACCGGTCATCATTTCAAA+AGG - chr1_2:21329152-21329171 None:intergenic 40.0%
!! ACTCTACAGAATGGATTGGT+TGG - chr1_2:21329410-21329429 None:intergenic 40.0%
GACAACTCTACAGAATGGAT+TGG - chr1_2:21329414-21329433 None:intergenic 40.0%
TATATAAATAAGAGGGCCGC+AGG - chr1_2:21329436-21329455 None:intergenic 40.0%
! CGGCCCTCTTATTTATATAG+AGG + chr1_2:21329437-21329456 Msa0062160:intron 40.0%
! TTCTTTTCTGCAAAGCAGGA+AGG - chr1_2:21329570-21329589 None:intergenic 40.0%
ATCCTTGGCTTAACTTTGCT+CGG - chr1_2:21329674-21329693 None:intergenic 40.0%
! GAGGGTTCAACATTTTTGCA+TGG - chr1_2:21329857-21329876 None:intergenic 40.0%
CTGAATAGGGTTTGAGGAGA+AGG + chr1_2:21326396-21326415 Msa0062160:five_prime_UTR 45.0%
TTGTGAAAAGAAGGACGAGG+AGG - chr1_2:21326531-21326550 None:intergenic 45.0%
AGCTTGTGAAAAGAAGGACG+AGG - chr1_2:21326534-21326553 None:intergenic 45.0%
CTTTGAACGAGAAGTTCTCG+TGG + chr1_2:21327026-21327045 Msa0062160:intron 45.0%
GGCAAAAACCATCTGCGATT+AGG - chr1_2:21327508-21327527 None:intergenic 45.0%
! CACTCATTCAAAGGTGCGTT+CGG - chr1_2:21327556-21327575 None:intergenic 45.0%
TTGCAGATCTAGGAAGTTCG+AGG - chr1_2:21327588-21327607 None:intergenic 45.0%
!! GCTCCTTTTCTGGTGAGAAA+AGG - chr1_2:21327637-21327656 None:intergenic 45.0%
TGCTATTGCTGGTAGCCATT+TGG + chr1_2:21327775-21327794 Msa0062160:intron 45.0%
ATTCTCGGTCACACGTTCAA+AGG - chr1_2:21327970-21327989 None:intergenic 45.0%
CGAGAATCCTCAAACTTCCT+TGG + chr1_2:21327983-21328002 Msa0062160:intron 45.0%
GCAAAGACCAAGGAAGTTTG+AGG - chr1_2:21327993-21328012 None:intergenic 45.0%
GGTTGCAATAGTCGAAAGCT+GGG - chr1_2:21328355-21328374 None:intergenic 45.0%
! CTGGCGTCTAGGATTGAAAA+AGG + chr1_2:21328398-21328417 Msa0062160:CDS 45.0%
!! GAATTTGGTTTGTCGATGGC+TGG + chr1_2:21328430-21328449 Msa0062160:CDS 45.0%
CAACGTTACTCCATTGGCAT+TGG + chr1_2:21328465-21328484 Msa0062160:CDS 45.0%
GGTTTGAAGGTGATGAATCC+AGG - chr1_2:21328665-21328684 None:intergenic 45.0%
TCACCTTCAAACCTTACTCC+TGG + chr1_2:21328672-21328691 Msa0062160:CDS 45.0%
GATGGAGTATGATTCTTCGC+TGG - chr1_2:21328744-21328763 None:intergenic 45.0%
CACGTTAACTGGGGAGATAT+CGG + chr1_2:21328801-21328820 Msa0062160:CDS 45.0%
GCGCAATTTCAATCCTTCAG+TGG - chr1_2:21328907-21328926 None:intergenic 45.0%
TTGCGCTATCCTAATGAGGA+AGG + chr1_2:21328921-21328940 Msa0062160:CDS 45.0%
TGCGCTATCCTAATGAGGAA+GGG + chr1_2:21328922-21328941 Msa0062160:CDS 45.0%
ATGATGTGTGTCAGACACTC+GGG - chr1_2:21329078-21329097 None:intergenic 45.0%
TTGTGTAACTGTAGGTGCAC+TGG + chr1_2:21329259-21329278 Msa0062160:intron 45.0%
AGCCACTGCTGAAAATGATG+AGG + chr1_2:21329283-21329302 Msa0062160:CDS 45.0%
! CTCCTCATCATTTTCAGCAG+TGG - chr1_2:21329288-21329307 None:intergenic 45.0%
CACTGCTGAAAATGATGAGG+AGG + chr1_2:21329286-21329305 Msa0062160:CDS 45.0%
CATTCTGTAGAGTTGTCCTG+CGG + chr1_2:21329417-21329436 Msa0062160:intron 45.0%
CAAAGCAGGAAGGCAAATAC+TGG - chr1_2:21329560-21329579 None:intergenic 45.0%
CCTTTATATAGGCAGCGAAC+AGG - chr1_2:21329648-21329667 None:intergenic 45.0%
CCTGTTCGCTGCCTATATAA+AGG + chr1_2:21329645-21329664 Msa0062160:CDS 45.0%
GTTCGCTGCCTATATAAAGG+AGG + chr1_2:21329648-21329667 Msa0062160:CDS 45.0%
TTGCTCGGCCTCCTTTATAT+AGG - chr1_2:21329659-21329678 None:intergenic 45.0%
GAGCAAAGTTAAGCCAAGGA+TGG + chr1_2:21329673-21329692 Msa0062160:CDS 45.0%
GTGTAAAAGAGGACGAGTCA+GGG + chr1_2:21329793-21329812 Msa0062160:CDS 45.0%
!! TTTGGCTTGGCTGTGAAGAA+GGG - chr1_2:21329827-21329846 None:intergenic 45.0%
!!! TTTTGGCTTGGCTGTGAAGA+AGG - chr1_2:21329828-21329847 None:intergenic 45.0%
!! CTGATTTGGTTGAGCTGACA+CGG - chr1_2:21329890-21329909 None:intergenic 45.0%
! TCGCAGATGGTTTTTGCCTG+TGG + chr1_2:21327510-21327529 Msa0062160:intron 50.0%
!! AGGATTTGGGGCTCCTTTTC+TGG - chr1_2:21327647-21327666 None:intergenic 50.0%
! CTTCCTTGGTCTTTGCTCGT+TGG + chr1_2:21327997-21328016 Msa0062160:intron 50.0%
CTACCAACGAGCAAAGACCA+AGG - chr1_2:21328003-21328022 None:intergenic 50.0%
!! CTCGTTGGTAGTGCACCATT+GGG + chr1_2:21328012-21328031 Msa0062160:intron 50.0%
GGGTTGCAATAGTCGAAAGC+TGG - chr1_2:21328356-21328375 None:intergenic 50.0%
AGTGCCATCAGGAACAGTGA+GGG - chr1_2:21328376-21328395 None:intergenic 50.0%
CCATGAGAAGCCGTACTGAA+GGG + chr1_2:21328577-21328596 Msa0062160:CDS 50.0%
CATAGCAAGGCCCTTCAGTA+CGG - chr1_2:21328590-21328609 None:intergenic 50.0%
GCACCAGGAGTAAGGTTTGA+AGG - chr1_2:21328678-21328697 None:intergenic 50.0%
CTTGCAATGCACCAGGAGTA+AGG - chr1_2:21328686-21328705 None:intergenic 50.0%
TCCTGGTGCATTGCAAGACA+AGG + chr1_2:21328689-21328708 Msa0062160:CDS 50.0%
ACCTTGTCTTGCAATGCACC+AGG - chr1_2:21328693-21328712 None:intergenic 50.0%
CGATATCTCCCCAGTTAACG+TGG - chr1_2:21328803-21328822 None:intergenic 50.0%
GTTAACTGGGGAGATATCGG+TGG + chr1_2:21328804-21328823 Msa0062160:CDS 50.0%
GCGCTATCCTAATGAGGAAG+GGG + chr1_2:21328923-21328942 Msa0062160:CDS 50.0%
AACCACACGTGTCAGTGTAG+CGG - chr1_2:21329113-21329132 None:intergenic 50.0%
CGACACTGAGATGACAACAC+CGG - chr1_2:21329168-21329187 None:intergenic 50.0%
AGTGTCGTGTCTTCCTGTGT+CGG + chr1_2:21329181-21329200 Msa0062160:intron 50.0%
! CTTCCTGTGTCGGTGTTTCA+TGG + chr1_2:21329191-21329210 Msa0062160:intron 50.0%
TAGCCATGAAACACCGACAC+AGG - chr1_2:21329197-21329216 None:intergenic 50.0%
CGCAGGACAACTCTACAGAA+TGG - chr1_2:21329419-21329438 None:intergenic 50.0%
AGATCTCTGATGGGAGACAG+TGG + chr1_2:21329622-21329641 Msa0062160:CDS 50.0%
TGAGCTGCTTAGAACCAGAG+AGG + chr1_2:21329746-21329765 Msa0062160:CDS 50.0%
CGTGTAAAAGAGGACGAGTC+AGG + chr1_2:21329792-21329811 Msa0062160:CDS 50.0%
!!! GCATGGCTCACATTTTGGCT+TGG - chr1_2:21329840-21329859 None:intergenic 50.0%
!! GCTCGTTGGTAGTGCACCAT+TGG + chr1_2:21328011-21328030 Msa0062160:intron 55.0%
GCACCATTGGGCCCATACTT+AGG + chr1_2:21328024-21328043 Msa0062160:intron 55.0%
CGACCTAAGTATGGGCCCAA+TGG - chr1_2:21328030-21328049 None:intergenic 55.0%
GCAACCCTCACTGTTCCTGA+TGG + chr1_2:21328369-21328388 Msa0062160:CDS 55.0%
CAGTGCCATCAGGAACAGTG+AGG - chr1_2:21328377-21328396 None:intergenic 55.0%
CTGTTCCTGATGGCACTGTC+TGG + chr1_2:21328379-21328398 Msa0062160:CDS 55.0%
GCCATGAGAAGCCGTACTGA+AGG + chr1_2:21328576-21328595 Msa0062160:CDS 55.0%
CCCTTCAGTACGGCTTCTCA+TGG - chr1_2:21328580-21328599 None:intergenic 55.0%
TGTCAGTGTAGCGGCAGAGT+AGG - chr1_2:21329104-21329123 None:intergenic 55.0%
GGCCGAGCAAAGTTAAGCCA+AGG + chr1_2:21329669-21329688 Msa0062160:CDS 55.0%
AACCAGAGAGGTAGTGCTGC+AGG + chr1_2:21329758-21329777 Msa0062160:CDS 55.0%
AACCTGCAGCACTACCTCTC+TGG - chr1_2:21329763-21329782 None:intergenic 55.0%
!! TGACACGGTGCTGCAAGTGA+GGG - chr1_2:21329875-21329894 None:intergenic 55.0%
AGACGCCAGACAGTGCCATC+AGG - chr1_2:21328387-21328406 None:intergenic 60.0%
GATGGCACTGTCTGGCGTCT+AGG + chr1_2:21328387-21328406 Msa0062160:CDS 60.0%
TGCCGCTACACTGACACGTG+TGG + chr1_2:21329108-21329127 Msa0062160:intron 60.0%
!! CTGACACGGTGCTGCAAGTG+AGG - chr1_2:21329876-21329895 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 21326289 21329920 21326289 ID=Msa0062160;Name=Msa0062160
chr1_2 mRNA 21326289 21329920 21326289 ID=Msa0062160-mRNA-1;Parent=Msa0062160;Name=Msa0062160-mRNA-1;_AED=0.37;_eAED=0.37;_QI=236|0.66|0.5|1|1|1|4|0|436
chr1_2 exon 21326289 21326587 21326289 ID=Msa0062160-mRNA-1:exon:7936;Parent=Msa0062160-mRNA-1
chr1_2 exon 21328318 21328999 21328318 ID=Msa0062160-mRNA-1:exon:7937;Parent=Msa0062160-mRNA-1
chr1_2 exon 21329273 21329427 21329273 ID=Msa0062160-mRNA-1:exon:7938;Parent=Msa0062160-mRNA-1
chr1_2 exon 21329510 21329920 21329510 ID=Msa0062160-mRNA-1:exon:7939;Parent=Msa0062160-mRNA-1
chr1_2 five_prime_UTR 21326289 21326524 21326289 ID=Msa0062160-mRNA-1:five_prime_utr;Parent=Msa0062160-mRNA-1
chr1_2 CDS 21326525 21326587 21326525 ID=Msa0062160-mRNA-1:cds;Parent=Msa0062160-mRNA-1
chr1_2 CDS 21328318 21328999 21328318 ID=Msa0062160-mRNA-1:cds;Parent=Msa0062160-mRNA-1
chr1_2 CDS 21329273 21329427 21329273 ID=Msa0062160-mRNA-1:cds;Parent=Msa0062160-mRNA-1
chr1_2 CDS 21329510 21329920 21329510 ID=Msa0062160-mRNA-1:cds;Parent=Msa0062160-mRNA-1
Gene Sequence

>Msa0062160

ATGCCTCCTCGTCCTTCTTTTCACAAGCTCATTCTCCCTTCATCCCTTCAAACTAGACAATTGAGGATTCCAGATAATTTTCTTAGGAAATATGGGGCCCAGCTTTCGACTATTGCAACCCTCACTGTTCCTGATGGCACTGTCTGGCGTCTAGGATTGAAAAAGGTTGACAACCGAATTTGGTTTGTCGATGGCTGGCAAGATTTTGTTCAACGTTACTCCATTGGCATTGGATACTTTCTAGTATTCACTTATGAAGGAAATTCAAATTTCATTGTTCATATCTTTAATATGAGTACTGCTGAGTTAAACTATCAATCAGCCATGAGAAGCCGTACTGAAGGGCCTTGCTATGCAAATTATCATCCTATTTTTGAAGACATTGAAGATATCGACTCCTTTGAATTCCTGGATTCATCACCTTCAAACCTTACTCCTGGTGCATTGCAAGACAAGGTTTTTAGTGGATCTTTGGATCAACTAACACCAGCGAAGAATCATACTCCATCATTGCAGAATTTGTTTAATGGGGGGTCTAAACTCAACCACGTTAACTGGGGAGATATCGGTGGTACTCTTTCTTCAAAGAGTGCCATTCAGTCAACCAGAGATATAGGTGTTCAGTTCAATGCTAATGAGTTTAAAAAGTCCACTGAAGGATTGAAATTGCGCTATCCTAATGAGGAAGGGGTTAATAATACTGATACGAAGAAAACTTCAAGAAAGAAGCGGAAATCAGATCCAAGTGCACTGGAAGCCACTGCTGAAAATGATGAGGAGGCAGAGCGCTATCGATTCTATGAAAGTGCGTCAGCAAGAAAAAGAACTGTAACAGCAGAAGAAAGAGAAAGGGCAATTAATGAGTCAAAGACTTTTGAACCAACCAATCCATTCTGTAGATCTTCTTCGACATTTCGTGTTGCGTACTCAGCTCGTGTTTCTGTTTTCCAGTATTTGCCTTCCTGCTTTGCAGAAAAGAATTTGAACGGTGTTTCAGGATTCATTAAGCTTCAGATCTCTGATGGGAGACAGTGGCCTGTTCGCTGCCTATATAAAGGAGGCCGAGCAAAGTTAAGCCAAGGATGGTATGAATTTACATTAGAGAACAATTTAGGGGAAGGCGATATCTGTGTTTTTGAGCTGCTTAGAACCAGAGAGGTAGTGCTGCAGGTTACTTTGTTTCGTGTAAAAGAGGACGAGTCAGGGTTATTCAACCCTTCTTCACAGCCAAGCCAAAATGTGAGCCATGCAAAAATGTTGAACCCTCACTTGCAGCACCGTGTCAGCTCAACCAAATCAGCTAAAAATTAG

Protein sequence

>Msa0062160

MPPRPSFHKLILPSSLQTRQLRIPDNFLRKYGAQLSTIATLTVPDGTVWRLGLKKVDNRIWFVDGWQDFVQRYSIGIGYFLVFTYEGNSNFIVHIFNMSTAELNYQSAMRSRTEGPCYANYHPIFEDIEDIDSFEFLDSSPSNLTPGALQDKVFSGSLDQLTPAKNHTPSLQNLFNGGSKLNHVNWGDIGGTLSSKSAIQSTRDIGVQFNANEFKKSTEGLKLRYPNEEGVNNTDTKKTSRKKRKSDPSALEATAENDEEAERYRFYESASARKRTVTAEERERAINESKTFEPTNPFCRSSSTFRVAYSARVSVFQYLPSCFAEKNLNGVSGFIKLQISDGRQWPVRCLYKGGRAKLSQGWYEFTLENNLGEGDICVFELLRTREVVLQVTLFRVKEDESGLFNPSSQPSQNVSHAKMLNPHLQHRVSSTKSAKN*