Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0062160 | sp|Q8L3W1|VRN1_ARATH | 48.363 | 397 | 145 | 9 | 3 | 398 | 2 | 339 | 1.73e-115 | 344 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0062160 | A0A072VFE7 | 95.642 | 436 | 16 | 2 | 1 | 436 | 1 | 433 | 0.0 | 837 |
Gene ID | Type | Classification |
---|---|---|
Msa0062160 | TF | B3 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002060 | Msa0062160 | -0.802080 | 6.647123e-49 | -8.615850e-47 |
Msa0002690 | Msa0062160 | -0.802534 | 5.361442e-49 | -8.615850e-47 |
Msa0004180 | Msa0062160 | -0.830786 | 2.413640e-55 | -8.615850e-47 |
Msa0017980 | Msa0062160 | -0.841112 | 5.789181e-58 | -8.615850e-47 |
Msa0018010 | Msa0062160 | -0.802467 | 5.533567e-49 | -8.615850e-47 |
Msa0018610 | Msa0062160 | -0.807644 | 4.571143e-50 | -8.615850e-47 |
Msa0024070 | Msa0062160 | -0.811662 | 6.258315e-51 | -8.615850e-47 |
Msa0024320 | Msa0062160 | -0.802410 | 5.685773e-49 | -8.615850e-47 |
Msa0025340 | Msa0062160 | -0.813783 | 2.149619e-51 | -8.615850e-47 |
Msa0027120 | Msa0062160 | -0.819518 | 1.113586e-52 | -8.615850e-47 |
Msa0028410 | Msa0062160 | -0.814161 | 1.773931e-51 | -8.615850e-47 |
Msa0030710 | Msa0062160 | -0.803927 | 2.760058e-49 | -8.615850e-47 |
Msa0032350 | Msa0062160 | -0.836594 | 8.538386e-57 | -8.615850e-47 |
Msa0034320 | Msa0062160 | -0.808406 | 3.145566e-50 | -8.615850e-47 |
Msa0037300 | Msa0062160 | -0.818923 | 1.520976e-52 | -8.615850e-47 |
Msa0042210 | Msa0062160 | -0.834645 | 2.659495e-56 | -8.615850e-47 |
Msa0044700 | Msa0062160 | -0.803069 | 4.156790e-49 | -8.615850e-47 |
Msa0046090 | Msa0062160 | -0.821036 | 4.997065e-53 | -8.615850e-47 |
Msa0046800 | Msa0062160 | -0.815525 | 8.841398e-52 | -8.615850e-47 |
Msa0058970 | Msa0062160 | -0.824742 | 6.843261e-54 | -8.615850e-47 |
Msa0062160 | Msa0067820 | -0.822877 | 1.872021e-53 | -8.615850e-47 |
Msa0062160 | Msa0075080 | -0.835848 | 1.321704e-56 | -8.615850e-47 |
Msa0062160 | Msa0076550 | -0.822029 | 2.947835e-53 | -8.615850e-47 |
Msa0062160 | Msa0076590 | -0.824398 | 8.249546e-54 | -8.615850e-47 |
Msa0062160 | Msa0077910 | -0.837956 | 3.827706e-57 | -8.615850e-47 |
Msa0062160 | Msa0077990 | -0.805119 | 1.556936e-49 | -8.615850e-47 |
Msa0062160 | Msa0078170 | -0.819060 | 1.416040e-52 | -8.615850e-47 |
Msa0062160 | Msa0079530 | -0.814949 | 1.187034e-51 | -8.615850e-47 |
Msa0062160 | Msa0080100 | -0.839872 | 1.221585e-57 | -8.615850e-47 |
Msa0062160 | Msa0081300 | -0.837792 | 4.217080e-57 | -8.615850e-47 |
Msa0062160 | Msa0097490 | -0.807475 | 4.965067e-50 | -8.615850e-47 |
Msa0062160 | Msa0097730 | -0.828526 | 8.559889e-55 | -8.615850e-47 |
Msa0062160 | Msa0102290 | -0.815659 | 8.253247e-52 | -8.615850e-47 |
Msa0062160 | Msa0116780 | -0.801823 | 7.506369e-49 | -8.615850e-47 |
Msa0062160 | Msa0117650 | 0.803502 | 3.380520e-49 | -8.615850e-47 |
Msa0062160 | Msa0119860 | -0.802779 | 4.771040e-49 | -8.615850e-47 |
Msa0062160 | Msa0122930 | -0.820226 | 7.672084e-53 | -8.615850e-47 |
Msa0062160 | Msa0124070 | -0.822213 | 2.672205e-53 | -8.615850e-47 |
Msa0062160 | Msa0125800 | -0.831578 | 1.541987e-55 | -8.615850e-47 |
Msa0062160 | Msa0127110 | -0.806270 | 8.924232e-50 | -8.615850e-47 |
Msa0062160 | Msa0127740 | 0.806444 | 8.201353e-50 | -8.615850e-47 |
Msa0062160 | Msa0131230 | -0.803478 | 3.419875e-49 | -8.615850e-47 |
Msa0062160 | Msa0132920 | -0.804790 | 1.823655e-49 | -8.615850e-47 |
Msa0062160 | Msa0145590 | -0.806204 | 9.216779e-50 | -8.615850e-47 |
Msa0062160 | Msa0147070 | -0.844082 | 9.424219e-59 | -8.615850e-47 |
Msa0062160 | Msa0151790 | -0.801209 | 1.003243e-48 | -8.615850e-47 |
Msa0062160 | Msa0155550 | -0.835864 | 1.309207e-56 | -8.615850e-47 |
Msa0062160 | Msa0156260 | -0.820706 | 5.951714e-53 | -8.615850e-47 |
Msa0062160 | Msa0160080 | -0.821559 | 3.786167e-53 | -8.615850e-47 |
Msa0062160 | Msa0160240 | 0.800487 | 1.408517e-48 | -8.615850e-47 |
Msa0062160 | Msa0160470 | -0.813224 | 2.852470e-51 | -8.615850e-47 |
Msa0062160 | Msa0162170 | -0.832992 | 6.886361e-56 | -8.615850e-47 |
Msa0062160 | Msa0164530 | -0.821195 | 4.594079e-53 | -8.615850e-47 |
Msa0062160 | Msa0167570 | -0.806440 | 8.218643e-50 | -8.615850e-47 |
Msa0062160 | Msa0168470 | -0.817097 | 3.935492e-52 | -8.615850e-47 |
Msa0062160 | Msa0170440 | -0.836895 | 7.155101e-57 | -8.615850e-47 |
Msa0062160 | Msa0170550 | -0.830192 | 3.372785e-55 | -8.615850e-47 |
Msa0062160 | Msa0170730 | -0.814036 | 1.890058e-51 | -8.615850e-47 |
Msa0062160 | Msa0172660 | -0.848104 | 7.579961e-60 | -8.615850e-47 |
Msa0062160 | Msa0173610 | -0.808688 | 2.738210e-50 | -8.615850e-47 |
Msa0062160 | Msa0178020 | -0.809018 | 2.328473e-50 | -8.615850e-47 |
Msa0062160 | Msa0182610 | -0.814539 | 1.463616e-51 | -8.615850e-47 |
Msa0062160 | Msa0182940 | -0.840429 | 8.740750e-58 | -8.615850e-47 |
Msa0062160 | Msa0183770 | 0.810065 | 1.387408e-50 | -8.615850e-47 |
Msa0062160 | Msa0185540 | -0.836414 | 9.489151e-57 | -8.615850e-47 |
Msa0062160 | Msa0186750 | -0.825802 | 3.842719e-54 | -8.615850e-47 |
Msa0062160 | Msa0188670 | -0.810574 | 1.077324e-50 | -8.615850e-47 |
Msa0062160 | Msa0191180 | -0.808544 | 2.940299e-50 | -8.615850e-47 |
Msa0062160 | Msa0191620 | 0.839773 | 1.296448e-57 | -8.615850e-47 |
Msa0062160 | Msa0202630 | -0.803241 | 3.829992e-49 | -8.615850e-47 |
Msa0062160 | Msa0224180 | -0.823730 | 1.183175e-53 | -8.615850e-47 |
Msa0062160 | Msa0231180 | -0.805401 | 1.358733e-49 | -8.615850e-47 |
Msa0062160 | Msa0234930 | -0.846560 | 2.011234e-59 | -8.615850e-47 |
Msa0062160 | Msa0243160 | -0.802026 | 6.819747e-49 | -8.615850e-47 |
Msa0062160 | Msa0245690 | -0.825329 | 4.974810e-54 | -8.615850e-47 |
Msa0062160 | Msa0256770 | -0.801376 | 9.268966e-49 | -8.615850e-47 |
Msa0062160 | Msa0260930 | -0.819839 | 9.408467e-53 | -8.615850e-47 |
Msa0062160 | Msa0261020 | -0.802093 | 6.606738e-49 | -8.615850e-47 |
Msa0062160 | Msa0269610 | -0.803012 | 4.270480e-49 | -8.615850e-47 |
Msa0062160 | Msa0273270 | -0.844950 | 5.504468e-59 | -8.615850e-47 |
Msa0062160 | Msa0274690 | -0.823229 | 1.549694e-53 | -8.615850e-47 |
Msa0062160 | Msa0280120 | -0.811288 | 7.546000e-51 | -8.615850e-47 |
Msa0062160 | Msa0284260 | -0.800564 | 1.358368e-48 | -8.615850e-47 |
Msa0062160 | Msa0284980 | -0.826177 | 3.129584e-54 | -8.615850e-47 |
Msa0062160 | Msa0285510 | -0.819532 | 1.105511e-52 | -8.615850e-47 |
Msa0062160 | Msa0294170 | -0.811712 | 6.102384e-51 | -8.615850e-47 |
Msa0062160 | Msa0296490 | -0.824030 | 1.006553e-53 | -8.615850e-47 |
Msa0062160 | Msa0307750 | -0.804454 | 2.143436e-49 | -8.615850e-47 |
Msa0062160 | Msa0307820 | -0.807841 | 4.150794e-50 | -8.615850e-47 |
Msa0062160 | Msa0312300 | 0.802042 | 6.767138e-49 | -8.615850e-47 |
Msa0062160 | Msa0317820 | -0.811842 | 5.718311e-51 | -8.615850e-47 |
Msa0062160 | Msa0322480 | -0.831830 | 1.336395e-55 | -8.615850e-47 |
Msa0062160 | Msa0335860 | -0.807078 | 6.026116e-50 | -8.615850e-47 |
Msa0062160 | Msa0336550 | -0.803803 | 2.928077e-49 | -8.615850e-47 |
Msa0062160 | Msa0353890 | -0.819415 | 1.175329e-52 | -8.615850e-47 |
Msa0062160 | Msa0355590 | -0.805173 | 1.516853e-49 | -8.615850e-47 |
Msa0062160 | Msa0367600 | -0.818433 | 1.965352e-52 | -8.615850e-47 |
Msa0062160 | Msa0368190 | -0.814258 | 1.687998e-51 | -8.615850e-47 |
Msa0062160 | Msa0369430 | -0.812592 | 3.924206e-51 | -8.615850e-47 |
Msa0062160 | Msa0370180 | -0.809279 | 2.046833e-50 | -8.615850e-47 |
Msa0062160 | Msa0371050 | -0.818296 | 2.111226e-52 | -8.615850e-47 |
Msa0062160 | Msa0375100 | -0.803052 | 4.189323e-49 | -8.615850e-47 |
Msa0062160 | Msa0376760 | -0.804326 | 2.279683e-49 | -8.615850e-47 |
Msa0062160 | Msa0377990 | -0.801848 | 7.420438e-49 | -8.615850e-47 |
Msa0062160 | Msa0379090 | -0.817363 | 3.428329e-52 | -8.615850e-47 |
Msa0062160 | Msa0380470 | -0.820435 | 6.868345e-53 | -8.615850e-47 |
Msa0062160 | Msa0382050 | -0.816652 | 4.952021e-52 | -8.615850e-47 |
Msa0062160 | Msa0384570 | -0.813092 | 3.049581e-51 | -8.615850e-47 |
Msa0062160 | Msa0386310 | -0.810765 | 9.797364e-51 | -8.615850e-47 |
Msa0062160 | Msa0390760 | -0.823531 | 1.317125e-53 | -8.615850e-47 |
Msa0062160 | Msa0400890 | -0.823587 | 1.278564e-53 | -8.615850e-47 |
Msa0062160 | Msa0415060 | -0.809178 | 2.150943e-50 | -8.615850e-47 |
Msa0062160 | Msa0416430 | -0.800076 | 1.707373e-48 | -8.615850e-47 |
Msa0062160 | Msa0416530 | -0.801735 | 7.824255e-49 | -8.615850e-47 |
Msa0062160 | Msa0417000 | -0.807231 | 5.591193e-50 | -8.615850e-47 |
Msa0062160 | Msa0420280 | -0.811242 | 7.719947e-51 | -8.615850e-47 |
Msa0062160 | Msa0426860 | -0.805342 | 1.398357e-49 | -8.615850e-47 |
Msa0062160 | Msa0429990 | -0.808060 | 3.728785e-50 | -8.615850e-47 |
Msa0062160 | Msa0431550 | -0.832844 | 7.497731e-56 | -8.615850e-47 |
Msa0062160 | Msa0436660 | -0.809278 | 2.047834e-50 | -8.615850e-47 |
Msa0062160 | Msa0439090 | -0.802371 | 5.789897e-49 | -8.615850e-47 |
Msa0062160 | Msa0439130 | -0.810003 | 1.430851e-50 | -8.615850e-47 |
Msa0062160 | Msa0439940 | -0.821126 | 4.764126e-53 | -8.615850e-47 |
Msa0062160 | Msa0444340 | -0.804207 | 2.412736e-49 | -8.615850e-47 |
Msa0062160 | Msa0446110 | -0.812407 | 4.305899e-51 | -8.615850e-47 |
Msa0062160 | Msa0449030 | -0.805417 | 1.348716e-49 | -8.615850e-47 |
Msa0062160 | Msa0461150 | -0.811832 | 5.747266e-51 | -8.615850e-47 |
Msa0062160 | Msa0464730 | -0.819857 | 9.319441e-53 | -8.615850e-47 |
Msa0062160 | Msa0470330 | -0.820104 | 8.180219e-53 | -8.615850e-47 |
Msa0062160 | Msa0471700 | -0.800622 | 1.322019e-48 | -8.615850e-47 |
Msa0062160 | Msa0474220 | -0.800015 | 1.757407e-48 | -8.615850e-47 |
Msa0062160 | Msa0474630 | -0.825089 | 5.668230e-54 | -8.615850e-47 |
Msa0062160 | Msa0474640 | -0.804656 | 1.945214e-49 | -8.615850e-47 |
Msa0062160 | Msa0475080 | -0.815196 | 1.046245e-51 | -8.615850e-47 |
Msa0062160 | Msa0476140 | -0.833812 | 4.301198e-56 | -8.615850e-47 |
Msa0062160 | Msa0476560 | -0.822689 | 2.071388e-53 | -8.615850e-47 |
Msa0062160 | Msa0482020 | -0.834504 | 2.885250e-56 | -8.615850e-47 |
Msa0062160 | Msa0483410 | -0.802074 | 6.667013e-49 | -8.615850e-47 |
Msa0062160 | Msa0485260 | -0.804801 | 1.814839e-49 | -8.615850e-47 |
Msa0062160 | Msa0492330 | -0.807758 | 4.323150e-50 | -8.615850e-47 |
Msa0062160 | Msa0500580 | -0.818045 | 2.405822e-52 | -8.615850e-47 |
Msa0062160 | Msa0506700 | -0.814304 | 1.649019e-51 | -8.615850e-47 |
Msa0062160 | Msa0508030 | -0.802758 | 4.818451e-49 | -8.615850e-47 |
Msa0062160 | Msa0508620 | -0.804891 | 1.737369e-49 | -8.615850e-47 |
Msa0062160 | Msa0508660 | -0.806167 | 9.381448e-50 | -8.615850e-47 |
Msa0062160 | Msa0514630 | -0.828773 | 7.461084e-55 | -8.615850e-47 |
Msa0062160 | Msa0519090 | -0.808278 | 3.350442e-50 | -8.615850e-47 |
Msa0062160 | Msa0519100 | -0.821131 | 4.753373e-53 | -8.615850e-47 |
Msa0062160 | Msa0521840 | -0.811802 | 5.835003e-51 | -8.615850e-47 |
Msa0062160 | Msa0522510 | -0.801164 | 1.024293e-48 | -8.615850e-47 |
Msa0062160 | Msa0527420 | -0.811638 | 6.333755e-51 | -8.615850e-47 |
Msa0062160 | Msa0544780 | -0.805432 | 1.338709e-49 | -8.615850e-47 |
Msa0062160 | Msa0549700 | -0.800088 | 1.698316e-48 | -8.615850e-47 |
Msa0062160 | Msa0550280 | -0.803228 | 3.853882e-49 | -8.615850e-47 |
Msa0062160 | Msa0552670 | -0.806343 | 8.615011e-50 | -8.615850e-47 |
Msa0062160 | Msa0552920 | -0.801166 | 1.023740e-48 | -8.615850e-47 |
Msa0062160 | Msa0555210 | -0.802303 | 5.981960e-49 | -8.615850e-47 |
Msa0062160 | Msa0558220 | -0.813315 | 2.724500e-51 | -8.615850e-47 |
Msa0062160 | Msa0562040 | -0.848589 | 5.566851e-60 | -8.615850e-47 |
Msa0062160 | Msa0565930 | -0.826647 | 2.419337e-54 | -8.615850e-47 |
Msa0062160 | Msa0574450 | -0.802537 | 5.353108e-49 | -8.615850e-47 |
Msa0062160 | Msa0581190 | -0.810369 | 1.193102e-50 | -8.615850e-47 |
Msa0062160 | Msa0581490 | -0.838358 | 3.016467e-57 | -8.615850e-47 |
Msa0062160 | Msa0583810 | -0.804323 | 2.282468e-49 | -8.615850e-47 |
Msa0062160 | Msa0606140 | -0.823883 | 1.089766e-53 | -8.615850e-47 |
Msa0062160 | Msa0608720 | -0.819323 | 1.233505e-52 | -8.615850e-47 |
Msa0062160 | Msa0616570 | -0.820837 | 5.552842e-53 | -8.615850e-47 |
Msa0062160 | Msa0617010 | -0.803160 | 3.980187e-49 | -8.615850e-47 |
Msa0062160 | Msa0619450 | -0.801797 | 7.600814e-49 | -8.615850e-47 |
Msa0062160 | Msa0619530 | -0.804248 | 2.366694e-49 | -8.615850e-47 |
Msa0062160 | Msa0619960 | -0.828775 | 7.453122e-55 | -8.615850e-47 |
Msa0062160 | Msa0620050 | -0.836235 | 1.053979e-56 | -8.615850e-47 |
Msa0062160 | Msa0622800 | -0.803559 | 3.290278e-49 | -8.615850e-47 |
Msa0062160 | Msa0623350 | -0.816578 | 5.145573e-52 | -8.615850e-47 |
Msa0062160 | Msa0624260 | -0.856245 | 3.664579e-62 | -8.615850e-47 |
Msa0062160 | Msa0624360 | -0.853590 | 2.160656e-61 | -8.615850e-47 |
Msa0062160 | Msa0646710 | -0.812603 | 3.900875e-51 | -8.615850e-47 |
Msa0062160 | Msa0648810 | -0.803642 | 3.162680e-49 | -8.615850e-47 |
Msa0062160 | Msa0649140 | -0.822762 | 1.991338e-53 | -8.615850e-47 |
Msa0062160 | Msa0655980 | -0.822963 | 1.787995e-53 | -8.615850e-47 |
Msa0062160 | Msa0659580 | -0.801256 | 9.808719e-49 | -8.615850e-47 |
Msa0062160 | Msa0660160 | -0.807516 | 4.866556e-50 | -8.615850e-47 |
Msa0062160 | Msa0679270 | -0.819741 | 9.902274e-53 | -8.615850e-47 |
Msa0062160 | Msa0681100 | -0.808995 | 2.355073e-50 | -8.615850e-47 |
Msa0062160 | Msa0685520 | -0.803843 | 2.872237e-49 | -8.615850e-47 |
Msa0062160 | Msa0695930 | -0.812388 | 4.348553e-51 | -8.615850e-47 |
Msa0062160 | Msa0699200 | -0.848983 | 4.328868e-60 | -8.615850e-47 |
Msa0062160 | Msa0699900 | -0.818124 | 2.308315e-52 | -8.615850e-47 |
Msa0062160 | Msa0708360 | -0.805367 | 1.381214e-49 | -8.615850e-47 |
Msa0062160 | Msa0711860 | -0.827603 | 1.428121e-54 | -8.615850e-47 |
Msa0062160 | Msa0719330 | -0.812314 | 4.512099e-51 | -8.615850e-47 |
Msa0062160 | Msa0724120 | -0.819376 | 1.199625e-52 | -8.615850e-47 |
Msa0062160 | Msa0745010 | -0.817229 | 3.675029e-52 | -8.615850e-47 |
Msa0062160 | Msa0748470 | -0.826429 | 2.726454e-54 | -8.615850e-47 |
Msa0062160 | Msa0748890 | -0.803062 | 4.169273e-49 | -8.615850e-47 |
Msa0062160 | Msa0753590 | -0.810658 | 1.033020e-50 | -8.615850e-47 |
Msa0062160 | Msa0762900 | -0.801540 | 8.581597e-49 | -8.615850e-47 |
Msa0062160 | Msa0766910 | -0.808950 | 2.406840e-50 | -8.615850e-47 |
Msa0062160 | Msa0799150 | -0.829860 | 4.064782e-55 | -8.615850e-47 |
Msa0062160 | Msa0807840 | -0.827355 | 1.637809e-54 | -8.615850e-47 |
Msa0062160 | Msa0822680 | -0.812995 | 3.202550e-51 | -8.615850e-47 |
Msa0062160 | Msa0825960 | -0.825303 | 5.045917e-54 | -8.615850e-47 |
Msa0062160 | Msa0831710 | -0.806357 | 8.554746e-50 | -8.615850e-47 |
Msa0062160 | Msa0868500 | -0.826748 | 2.288276e-54 | -8.615850e-47 |
Msa0062160 | Msa0868510 | -0.817937 | 2.545146e-52 | -8.615850e-47 |
Msa0062160 | Msa0868520 | -0.817055 | 4.021043e-52 | -8.615850e-47 |
Msa0062160 | Msa0869090 | -0.826933 | 2.066703e-54 | -8.615850e-47 |
Msa0062160 | Msa0880200 | -0.826455 | 2.687173e-54 | -8.615850e-47 |
Msa0062160 | Msa0907520 | -0.815884 | 7.354878e-52 | -8.615850e-47 |
Msa0062160 | Msa0930150 | -0.813087 | 3.057287e-51 | -8.615850e-47 |
Msa0062160 | Msa0932040 | -0.816404 | 5.629091e-52 | -8.615850e-47 |
Msa0062160 | Msa0933320 | -0.806890 | 6.603000e-50 | -8.615850e-47 |
Msa0062160 | Msa0940400 | -0.815204 | 1.042282e-51 | -8.615850e-47 |
Msa0062160 | Msa0941410 | -0.814219 | 1.722441e-51 | -8.615850e-47 |
Msa0062160 | Msa0941420 | -0.816940 | 4.266595e-52 | -8.615850e-47 |
Msa0062160 | Msa0945560 | -0.846152 | 2.598358e-59 | -8.615850e-47 |
Msa0062160 | Msa0959970 | -0.826185 | 3.116212e-54 | -8.615850e-47 |
Msa0062160 | Msa0970120 | -0.811500 | 6.787638e-51 | -8.615850e-47 |
Msa0062160 | Msa0970160 | -0.826227 | 3.044967e-54 | -8.615850e-47 |
Msa0062160 | Msa0971100 | -0.801593 | 8.369949e-49 | -8.615850e-47 |
Msa0062160 | Msa0973010 | -0.805442 | 1.332555e-49 | -8.615850e-47 |
Msa0062160 | Msa0978540 | -0.827801 | 1.280157e-54 | -8.615850e-47 |
Msa0062160 | Msa0978550 | -0.814689 | 1.355966e-51 | -8.615850e-47 |
Msa0062160 | Msa0978560 | -0.815153 | 1.069488e-51 | -8.615850e-47 |
Msa0062160 | Msa0985570 | -0.814941 | 1.192183e-51 | -8.615850e-47 |
Msa0062160 | Msa1002980 | -0.808612 | 2.843670e-50 | -8.615850e-47 |
Msa0062160 | Msa1007980 | -0.816361 | 5.753515e-52 | -8.615850e-47 |
Msa0062160 | Msa1013510 | -0.827009 | 1.982484e-54 | -8.615850e-47 |
Msa0062160 | Msa1013560 | -0.848709 | 5.156293e-60 | -8.615850e-47 |
Msa0062160 | Msa1031190 | -0.810996 | 8.731044e-51 | -8.615850e-47 |
Msa0062160 | Msa1036370 | -0.818035 | 2.418318e-52 | -8.615850e-47 |
Msa0062160 | Msa1044050 | -0.802071 | 6.675756e-49 | -8.615850e-47 |
Msa0062160 | Msa1047390 | -0.802166 | 6.382070e-49 | -8.615850e-47 |
Msa0062160 | Msa1052600 | -0.808503 | 2.999758e-50 | -8.615850e-47 |
Msa0062160 | Msa1057320 | -0.806751 | 7.063524e-50 | -8.615850e-47 |
Msa0062160 | Msa1068110 | -0.818446 | 1.951502e-52 | -8.615850e-47 |
Msa0062160 | Msa1070370 | -0.809945 | 1.471937e-50 | -8.615850e-47 |
Msa0062160 | Msa1070710 | -0.811287 | 7.551557e-51 | -8.615850e-47 |
Msa0062160 | Msa1072430 | -0.800365 | 1.491583e-48 | -8.615850e-47 |
Msa0062160 | Msa1073140 | -0.825772 | 3.906885e-54 | -8.615850e-47 |
Msa0062160 | Msa1078630 | -0.813813 | 2.116399e-51 | -8.615850e-47 |
Msa0062160 | Msa1078800 | -0.809510 | 1.825868e-50 | -8.615850e-47 |
Msa0062160 | Msa1079630 | -0.801668 | 8.076511e-49 | -8.615850e-47 |
Msa0062160 | Msa1088690 | -0.800412 | 1.459164e-48 | -8.615850e-47 |
Msa0062160 | Msa1095880 | -0.811864 | 5.657146e-51 | -8.615850e-47 |
Msa0062160 | Msa1102410 | -0.802013 | 6.862266e-49 | -8.615850e-47 |
Msa0062160 | Msa1119420 | -0.802565 | 5.281894e-49 | -8.615850e-47 |
Msa0062160 | Msa1123260 | -0.804240 | 2.375230e-49 | -8.615850e-47 |
Msa0062160 | Msa1126910 | -0.802305 | 5.974477e-49 | -8.615850e-47 |
Msa0062160 | Msa1126980 | -0.810022 | 1.416925e-50 | -8.615850e-47 |
Msa0062160 | Msa1131300 | -0.848654 | 5.341936e-60 | -8.615850e-47 |
Msa0062160 | Msa1134800 | -0.802512 | 5.415965e-49 | -8.615850e-47 |
Msa0062160 | Msa1134840 | -0.812814 | 3.508625e-51 | -8.615850e-47 |
Msa0062160 | Msa1137240 | -0.820950 | 5.230341e-53 | -8.615850e-47 |
Msa0062160 | Msa1158180 | -0.807977 | 3.883288e-50 | -8.615850e-47 |
Msa0062160 | Msa1158540 | -0.800680 | 1.286221e-48 | -8.615850e-47 |
Msa0062160 | Msa1161550 | -0.816554 | 5.209480e-52 | -8.615850e-47 |
Msa0062160 | Msa1163130 | -0.803546 | 3.310623e-49 | -8.615850e-47 |
Msa0062160 | Msa1166020 | -0.812015 | 5.244243e-51 | -8.615850e-47 |
Msa0062160 | Msa1177300 | -0.805034 | 1.622322e-49 | -8.615850e-47 |
Msa0062160 | Msa1190300 | -0.857829 | 1.250324e-62 | -8.615850e-47 |
Msa0062160 | Msa1190320 | -0.822476 | 2.321700e-53 | -8.615850e-47 |
Msa0062160 | Msa1190670 | -0.829539 | 4.863712e-55 | -8.615850e-47 |
Msa0062160 | Msa1197210 | -0.804918 | 1.715379e-49 | -8.615850e-47 |
Msa0062160 | Msa1197740 | -0.822818 | 1.932256e-53 | -8.615850e-47 |
Msa0062160 | Msa1199210 | -0.814986 | 1.164939e-51 | -8.615850e-47 |
Msa0062160 | Msa1203320 | -0.800637 | 1.312832e-48 | -8.615850e-47 |
Msa0062160 | Msa1208630 | -0.804298 | 2.309929e-49 | -8.615850e-47 |
Msa0062160 | Msa1209390 | -0.833286 | 5.819376e-56 | -8.615850e-47 |
Msa0062160 | Msa1209650 | -0.820279 | 7.458672e-53 | -8.615850e-47 |
Msa0062160 | Msa1211930 | -0.830582 | 2.708463e-55 | -8.615850e-47 |
Msa0062160 | Msa1221580 | -0.824311 | 8.647126e-54 | -8.615850e-47 |
Msa0062160 | Msa1222020 | -0.827463 | 1.542811e-54 | -8.615850e-47 |
Msa0062160 | Msa1222900 | -0.802606 | 5.179342e-49 | -8.615850e-47 |
Msa0062160 | Msa1223520 | -0.835337 | 1.779208e-56 | -8.615850e-47 |
Msa0062160 | Msa1236090 | -0.837809 | 4.175499e-57 | -8.615850e-47 |
Msa0062160 | Msa1239190 | 0.815155 | 1.068799e-51 | -8.615850e-47 |
Msa0062160 | Msa1244940 | -0.841982 | 3.415370e-58 | -8.615850e-47 |
Msa0062160 | Msa1251440 | -0.822146 | 2.769185e-53 | -8.615850e-47 |
Msa0062160 | Msa1257860 | -0.812828 | 3.482838e-51 | -8.615850e-47 |
Msa0062160 | Msa1258940 | -0.812394 | 4.334802e-51 | -8.615850e-47 |
Msa0062160 | Msa1263600 | -0.837641 | 4.611127e-57 | -8.615850e-47 |
Msa0062160 | Msa1263970 | -0.809352 | 1.973888e-50 | -8.615850e-47 |
Msa0062160 | Msa1264670 | -0.842829 | 2.036501e-58 | -8.615850e-47 |
Msa0062160 | Msa1266750 | -0.805745 | 1.150917e-49 | -8.615850e-47 |
Msa0062160 | Msa1267560 | -0.815783 | 7.745439e-52 | -8.615850e-47 |
Msa0062160 | Msa1269730 | -0.819997 | 8.655580e-53 | -8.615850e-47 |
Msa0062160 | Msa1270860 | -0.812881 | 3.390714e-51 | -8.615850e-47 |
Msa0062160 | Msa1278120 | -0.824205 | 9.156581e-54 | -8.615850e-47 |
Msa0062160 | Msa1286470 | -0.800040 | 1.736812e-48 | -8.615850e-47 |
Msa0062160 | Msa1292700 | -0.801598 | 8.347147e-49 | -8.615850e-47 |
Msa0062160 | Msa1297490 | -0.822517 | 2.270362e-53 | -8.615850e-47 |
Msa0062160 | Msa1297550 | -0.835327 | 1.789665e-56 | -8.615850e-47 |
Msa0062160 | Msa1298740 | -0.806773 | 6.989469e-50 | -8.615850e-47 |
Msa0062160 | Msa1303690 | -0.812120 | 4.974987e-51 | -8.615850e-47 |
Msa0062160 | Msa1305650 | -0.805132 | 1.547333e-49 | -8.615850e-47 |
Msa0062160 | Msa1317090 | -0.813517 | 2.458917e-51 | -8.615850e-47 |
Msa0062160 | Msa1325260 | -0.851583 | 8.074799e-61 | -8.615850e-47 |
Msa0062160 | Msa1330080 | -0.823139 | 1.626295e-53 | -8.615850e-47 |
Msa0062160 | Msa1331530 | -0.806433 | 8.246617e-50 | -8.615850e-47 |
Msa0062160 | Msa1334690 | -0.831090 | 2.032229e-55 | -8.615850e-47 |
Msa0062160 | Msa1335210 | -0.820452 | 6.808296e-53 | -8.615850e-47 |
Msa0062160 | Msa1337950 | -0.855626 | 5.560886e-62 | -8.615850e-47 |
Msa0062160 | Msa1356500 | -0.825258 | 5.169640e-54 | -8.615850e-47 |
Msa0062160 | Msa1363170 | -0.814984 | 1.166285e-51 | -8.615850e-47 |
Msa0062160 | Msa1369390 | -0.821951 | 3.072416e-53 | -8.615850e-47 |
Msa0062160 | Msa1373340 | -0.811942 | 5.439812e-51 | -8.615850e-47 |
Msa0062160 | Msa1374610 | -0.805490 | 1.302088e-49 | -8.615850e-47 |
Msa0062160 | Msa1375120 | -0.834888 | 2.309306e-56 | -8.615850e-47 |
Msa0062160 | Msa1375570 | -0.811609 | 6.426280e-51 | -8.615850e-47 |
Msa0062160 | Msa1375650 | -0.808359 | 3.220378e-50 | -8.615850e-47 |
Msa0062160 | Msa1376510 | -0.825724 | 4.009803e-54 | -8.615850e-47 |
Msa0062160 | Msa1376590 | -0.847746 | 9.517823e-60 | -8.615850e-47 |
Msa0062160 | Msa1386820 | -0.842096 | 3.186334e-58 | -8.615850e-47 |
Msa0062160 | Msa1390330 | -0.827493 | 1.517266e-54 | -8.615850e-47 |
Msa0062160 | Msa1396310 | -0.815826 | 7.577008e-52 | -8.615850e-47 |
Msa0062160 | Msa1405040 | -0.845121 | 4.946794e-59 | -8.615850e-47 |
Msa0062160 | Msa1411390 | -0.807408 | 5.129190e-50 | -8.615850e-47 |
Msa0062160 | Msa1412750 | -0.839269 | 1.752574e-57 | -8.615850e-47 |
Msa0062160 | Msa1416460 | -0.805934 | 1.050251e-49 | -8.615850e-47 |
Msa0062160 | Msa1418210 | -0.802351 | 5.846717e-49 | -8.615850e-47 |
Msa0062160 | Msa1419930 | -0.817475 | 3.235721e-52 | -8.615850e-47 |
Msa0062160 | Msa1427020 | -0.817721 | 2.846797e-52 | -8.615850e-47 |
Msa0062160 | Msa1428990 | -0.801676 | 8.047536e-49 | -8.615850e-47 |
Msa0062160 | Msa1437320 | -0.801020 | 1.096578e-48 | -8.615850e-47 |
Msa0062160 | Msa1439000 | -0.823038 | 1.717393e-53 | -8.615850e-47 |
Msa0062160 | Msa1439880 | -0.812834 | 3.473164e-51 | -8.615850e-47 |
Msa0062160 | Msa1444070 | -0.807404 | 5.139536e-50 | -8.615850e-47 |
Msa0062160 | Msa1444750 | -0.820464 | 6.764272e-53 | -8.615850e-47 |
Msa0062160 | Msa1448410 | -0.802784 | 4.759627e-49 | -8.615850e-47 |
Msa0062160 | Msa1449320 | -0.808243 | 3.408859e-50 | -8.615850e-47 |
Msa0062160 | Msa1449680 | -0.810963 | 8.874805e-51 | -8.615850e-47 |
Msa0062160 | Msa1453130 | -0.814191 | 1.746755e-51 | -8.615850e-47 |
Msa0062160 | Msa1455000 | -0.819033 | 1.436430e-52 | -8.615850e-47 |
Msa0062160 | Msa1455560 | -0.802470 | 5.525687e-49 | -8.615850e-47 |
Msa0062160 | Msa1460340 | -0.821683 | 3.544504e-53 | -8.615850e-47 |
Msa0062160 | Msa1462700 | -0.828942 | 6.791328e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0062160 | MtrunA17_Chr1g0162441 | 95.642 | 436 | 16 | 2 | 1 | 436 | 1 | 433 | 0.0 | 837 |
Msa0062160 | MtrunA17_Chr4g0033961 | 60.364 | 439 | 158 | 8 | 3 | 436 | 2 | 429 | 0.0 | 520 |
Msa0062160 | MtrunA17_Chr1g0162411 | 49.645 | 423 | 121 | 14 | 1 | 363 | 1 | 391 | 3.63e-108 | 327 |
Msa0062160 | MtrunA17_Chr1g0162421 | 89.655 | 58 | 6 | 0 | 21 | 78 | 7 | 64 | 2.15e-31 | 114 |
Msa0062160 | MtrunA17_Chr1g0162431 | 83.333 | 54 | 9 | 0 | 348 | 401 | 5 | 58 | 2.90e-25 | 98.2 |
Msa0062160 | MtrunA17_Chr5g0429931 | 50.000 | 84 | 42 | 0 | 22 | 105 | 10 | 93 | 5.51e-24 | 100 |
Msa0062160 | MtrunA17_Chr5g0429931 | 30.387 | 181 | 93 | 6 | 221 | 395 | 89 | 242 | 1.74e-11 | 64.3 |
Msa0062160 | MtrunA17_Chr3g0077461 | 44.444 | 99 | 55 | 0 | 7 | 105 | 237 | 335 | 5.55e-24 | 103 |
Msa0062160 | MtrunA17_Chr3g0077461 | 44.681 | 94 | 51 | 1 | 22 | 115 | 22 | 114 | 1.19e-19 | 90.9 |
Msa0062160 | MtrunA17_Chr4g0009491 | 45.455 | 99 | 54 | 0 | 7 | 105 | 225 | 323 | 5.62e-24 | 103 |
Msa0062160 | MtrunA17_Chr4g0009491 | 41.176 | 85 | 50 | 0 | 21 | 105 | 11 | 95 | 2.90e-17 | 83.6 |
Msa0062160 | MtrunA17_Chr3g0077411 | 44.037 | 109 | 60 | 1 | 7 | 115 | 25 | 132 | 7.32e-24 | 103 |
Msa0062160 | MtrunA17_Chr3g0077411 | 46.000 | 100 | 53 | 1 | 7 | 105 | 262 | 361 | 9.33e-24 | 103 |
Msa0062160 | MtrunA17_Chr3g0077451 | 48.235 | 85 | 44 | 0 | 21 | 105 | 10 | 94 | 1.28e-23 | 99.0 |
Msa0062160 | MtrunA17_Chr7g0233571 | 42.857 | 105 | 60 | 0 | 3 | 107 | 6 | 110 | 2.26e-22 | 95.1 |
Msa0062160 | MtrunA17_Chr3g0103151 | 36.170 | 141 | 80 | 2 | 7 | 147 | 12 | 142 | 2.51e-22 | 93.2 |
Msa0062160 | MtrunA17_Chr3g0077381 | 44.444 | 99 | 55 | 0 | 7 | 105 | 247 | 345 | 3.49e-22 | 98.6 |
Msa0062160 | MtrunA17_Chr3g0077381 | 44.706 | 85 | 47 | 0 | 21 | 105 | 34 | 118 | 7.37e-20 | 91.7 |
Msa0062160 | MtrunA17_Chr7g0233561 | 44.444 | 99 | 55 | 0 | 7 | 105 | 18 | 116 | 7.54e-22 | 95.9 |
Msa0062160 | MtrunA17_Chr3g0103181 | 42.424 | 99 | 55 | 1 | 7 | 105 | 12 | 108 | 2.22e-21 | 93.6 |
Msa0062160 | MtrunA17_Chr3g0077361 | 38.793 | 116 | 65 | 2 | 7 | 116 | 40 | 155 | 3.50e-21 | 95.9 |
Msa0062160 | MtrunA17_Chr3g0077361 | 43.662 | 71 | 40 | 0 | 7 | 77 | 289 | 359 | 1.16e-15 | 79.0 |
Msa0062160 | MtrunA17_Chr3g0077361 | 34.848 | 132 | 72 | 5 | 268 | 395 | 380 | 501 | 1.62e-12 | 69.3 |
Msa0062160 | MtrunA17_Chr3g0103191 | 40.741 | 108 | 60 | 2 | 1 | 108 | 8 | 111 | 7.37e-21 | 91.7 |
Msa0062160 | MtrunA17_Chr5g0419201 | 39.604 | 101 | 61 | 0 | 7 | 107 | 16 | 116 | 1.60e-20 | 89.0 |
Msa0062160 | MtrunA17_Chr3g0131891 | 41.414 | 99 | 58 | 0 | 7 | 105 | 19 | 117 | 4.46e-20 | 90.9 |
Msa0062160 | MtrunA17_Chr3g0131891 | 27.751 | 209 | 121 | 7 | 209 | 395 | 103 | 303 | 1.91e-14 | 74.3 |
Msa0062160 | MtrunA17_Chr7g0233541 | 44.578 | 83 | 46 | 0 | 23 | 105 | 2 | 84 | 1.35e-19 | 89.0 |
Msa0062160 | MtrunA17_Chr8g0390841 | 41.000 | 100 | 59 | 0 | 7 | 106 | 39 | 138 | 2.39e-19 | 90.5 |
Msa0062160 | MtrunA17_Chr8g0390841 | 28.750 | 160 | 100 | 5 | 243 | 401 | 191 | 337 | 2.43e-14 | 75.1 |
Msa0062160 | MtrunA17_Chr1g0163071 | 36.585 | 123 | 65 | 2 | 23 | 142 | 2 | 114 | 8.83e-19 | 86.7 |
Msa0062160 | MtrunA17_Chr1g0163071 | 34.513 | 113 | 66 | 2 | 287 | 399 | 187 | 291 | 1.37e-13 | 71.2 |
Msa0062160 | MtrunA17_Chr7g0233531 | 41.837 | 98 | 54 | 1 | 23 | 120 | 2 | 96 | 1.89e-18 | 85.1 |
Msa0062160 | MtrunA17_Chr1g0154041 | 23.750 | 400 | 242 | 12 | 4 | 399 | 13 | 353 | 2.23e-18 | 87.8 |
Msa0062160 | MtrunA17_Chr7g0233521 | 42.169 | 83 | 48 | 0 | 23 | 105 | 2 | 84 | 8.96e-18 | 83.2 |
Msa0062160 | MtrunA17_Chr3g0103171 | 38.710 | 93 | 57 | 0 | 22 | 114 | 5 | 97 | 1.13e-17 | 82.8 |
Msa0062160 | MtrunA17_Chr1g0154111 | 23.810 | 378 | 224 | 11 | 19 | 391 | 38 | 356 | 2.44e-15 | 78.2 |
Msa0062160 | MtrunA17_Chr1g0208771 | 36.364 | 121 | 62 | 3 | 22 | 142 | 12 | 117 | 2.00e-14 | 75.1 |
Msa0062160 | MtrunA17_Chr1g0208771 | 34.091 | 132 | 74 | 5 | 274 | 403 | 178 | 298 | 4.21e-14 | 73.9 |
Msa0062160 | MtrunA17_Chr1g0163191 | 34.234 | 111 | 66 | 3 | 5 | 115 | 7 | 110 | 9.79e-13 | 65.9 |
Msa0062160 | MtrunA17_Chr1g0154161 | 44.304 | 79 | 44 | 0 | 19 | 97 | 42 | 120 | 1.76e-12 | 68.2 |
Msa0062160 | MtrunA17_Chr3g0077421 | 36.232 | 138 | 70 | 6 | 267 | 396 | 70 | 197 | 3.15e-12 | 65.5 |
Msa0062160 | MtrunA17_Chr3g0077421 | 41.667 | 72 | 41 | 1 | 51 | 122 | 1 | 71 | 8.24e-11 | 61.2 |
Msa0062160 | MtrunA17_Chr3g0077441 | 36.232 | 138 | 70 | 6 | 267 | 396 | 70 | 197 | 3.15e-12 | 65.5 |
Msa0062160 | MtrunA17_Chr3g0077441 | 41.667 | 72 | 41 | 1 | 51 | 122 | 1 | 71 | 8.24e-11 | 61.2 |
Msa0062160 | MtrunA17_Chr1g0154101 | 37.931 | 87 | 53 | 1 | 11 | 97 | 187 | 272 | 9.91e-12 | 67.0 |
Msa0062160 | MtrunA17_Chr1g0154101 | 41.772 | 79 | 46 | 0 | 19 | 97 | 37 | 115 | 4.68e-11 | 65.1 |
Msa0062160 | MtrunA17_Chr1g0154211 | 41.772 | 79 | 46 | 0 | 19 | 97 | 34 | 112 | 1.43e-11 | 65.9 |
Msa0062160 | MtrunA17_Chr1g0154131 | 39.560 | 91 | 54 | 1 | 7 | 97 | 26 | 115 | 1.69e-11 | 65.9 |
Msa0062160 | MtrunA17_Chr1g0154131 | 40.506 | 79 | 47 | 0 | 19 | 97 | 194 | 272 | 3.17e-11 | 65.1 |
Msa0062160 | MtrunA17_Chr1g0154171 | 41.772 | 79 | 46 | 0 | 19 | 97 | 34 | 112 | 3.97e-11 | 64.3 |
Msa0062160 | MtrunA17_Chr1g0163181 | 33.663 | 101 | 61 | 2 | 5 | 105 | 7 | 101 | 4.09e-11 | 64.7 |
Msa0062160 | MtrunA17_Chr6g0467351 | 32.727 | 110 | 71 | 2 | 7 | 115 | 15 | 122 | 5.25e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0062160 | AT3G18990.1 | 48.363 | 397 | 145 | 9 | 3 | 398 | 2 | 339 | 1.76e-116 | 344 |
Msa0062160 | AT3G18990.2 | 48.111 | 397 | 146 | 9 | 3 | 398 | 2 | 339 | 2.84e-115 | 342 |
Msa0062160 | AT1G49480.3 | 63.804 | 163 | 54 | 4 | 237 | 398 | 66 | 224 | 5.71e-64 | 206 |
Msa0062160 | AT1G49480.1 | 63.804 | 163 | 54 | 4 | 237 | 398 | 66 | 224 | 5.71e-64 | 206 |
Msa0062160 | AT1G49480.2 | 63.804 | 163 | 54 | 4 | 237 | 398 | 66 | 224 | 5.71e-64 | 206 |
Msa0062160 | AT4G01580.1 | 42.718 | 103 | 59 | 0 | 3 | 105 | 26 | 128 | 4.73e-24 | 99.4 |
Msa0062160 | AT3G18960.2 | 40.777 | 103 | 61 | 0 | 3 | 105 | 26 | 128 | 8.44e-23 | 95.9 |
Msa0062160 | AT3G18960.1 | 40.777 | 103 | 61 | 0 | 3 | 105 | 26 | 128 | 9.17e-23 | 96.3 |
Msa0062160 | AT1G49475.1 | 35.849 | 106 | 64 | 2 | 3 | 105 | 27 | 131 | 6.73e-17 | 79.0 |
Msa0062160 | AT3G18960.3 | 41.667 | 84 | 49 | 0 | 22 | 105 | 8 | 91 | 1.27e-16 | 77.8 |
Find 106 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTACATTAGAGAACAATTT+AGG | 0.133108 | 1_2:+21329702 | Msa0062160:CDS |
AAGAATTTGAACGGTGTTTC+AGG | 0.187714 | 1_2:+21329585 | Msa0062160:CDS |
AAAAGGTTGACAACCGAATT+TGG | 0.209979 | 1_2:+21328415 | Msa0062160:CDS |
TCATTGCAGAATTTGTTTAA+TGG | 0.251640 | 1_2:+21328762 | Msa0062160:CDS |
CTAAACTCAACCACGTTAAC+TGG | 0.274983 | 1_2:+21328790 | Msa0062160:CDS |
CATTGCAGAATTTGTTTAAT+GGG | 0.276665 | 1_2:+21328763 | Msa0062160:CDS |
TTATTAACCCCTTCCTCATT+AGG | 0.282526 | 1_2:-21328930 | None:intergenic |
TATCGACTCCTTTGAATTCC+TGG | 0.294296 | 1_2:+21328644 | Msa0062160:CDS |
TATTTCCTAAGAAAATTATC+TGG | 0.317191 | 1_2:-21328324 | None:intergenic |
AGACTCATGAACTTAAAATT+AGG | 0.331687 | 1_2:+21326300 | Msa0062160:five_prime_UTR |
TTACATTAGAGAACAATTTA+GGG | 0.336001 | 1_2:+21329703 | Msa0062160:CDS |
AGAGATTCAAAGCATAATCT+TGG | 0.363466 | 1_2:-21326487 | None:intergenic |
CAAAGCAGGAAGGCAAATAC+TGG | 0.378699 | 1_2:-21329557 | None:intergenic |
ATCCTTGGCTTAACTTTGCT+CGG | 0.390374 | 1_2:-21329671 | None:intergenic |
CGTGTAAAAGAGGACGAGTC+AGG | 0.395227 | 1_2:+21329792 | Msa0062160:CDS |
TTACCAATTGTCTAGTTTGA+AGG | 0.397207 | 1_2:-21326569 | None:intergenic |
ATCCCTTCAAACTAGACAAT+TGG | 0.398966 | 1_2:+21326566 | Msa0062160:CDS |
TTGCTCGGCCTCCTTTATAT+AGG | 0.399413 | 1_2:-21329656 | None:intergenic |
CTGGCGTCTAGGATTGAAAA+AGG | 0.407049 | 1_2:+21328398 | Msa0062160:CDS |
TTACTCAGATCTAAATTGTT+GGG | 0.408825 | 1_2:-21326429 | None:intergenic |
TTTCTAGTATTCACTTATGA+AGG | 0.411457 | 1_2:+21328492 | Msa0062160:CDS |
ATTCAGTCAACCAGAGATAT+AGG | 0.424869 | 1_2:+21328849 | Msa0062160:CDS |
ATTACTCAGATCTAAATTGT+TGG | 0.426490 | 1_2:-21326430 | None:intergenic |
AGCCATCGACAAACCAAATT+CGG | 0.433503 | 1_2:-21328428 | None:intergenic |
CTGTTCCTGATGGCACTGTC+TGG | 0.439890 | 1_2:+21328379 | Msa0062160:CDS |
CTTGCAATGCACCAGGAGTA+AGG | 0.441488 | 1_2:-21328683 | None:intergenic |
GAATTTGGTTTGTCGATGGC+TGG | 0.442071 | 1_2:+21328430 | Msa0062160:CDS |
TATATCTCTGGTTGACTGAA+TGG | 0.443124 | 1_2:-21328847 | None:intergenic |
TTAAACAAATTCTGCAATGA+TGG | 0.444180 | 1_2:-21328759 | None:intergenic |
CTGAATAGGGTTTGAGGAGA+AGG | 0.449747 | 1_2:+21326396 | Msa0062160:five_prime_UTR |
TTTGTTCAACGTTACTCCAT+TGG | 0.453832 | 1_2:+21328459 | Msa0062160:CDS |
CAACGTTACTCCATTGGCAT+TGG | 0.459331 | 1_2:+21328465 | Msa0062160:CDS |
ATGTAAATTCATACCATCCT+TGG | 0.460863 | 1_2:-21329686 | None:intergenic |
GATGGCACTGTCTGGCGTCT+AGG | 0.462195 | 1_2:+21328387 | Msa0062160:CDS |
TGTCTAGTTTGAAGGGATGA+AGG | 0.472503 | 1_2:-21326561 | None:intergenic |
CCTTTATATAGGCAGCGAAC+AGG | 0.472865 | 1_2:-21329645 | None:intergenic |
ATTAAGCTTCAGATCTCTGA+TGG | 0.476714 | 1_2:+21329612 | Msa0062160:CDS |
TACTTTGTTTCGTGTAAAAG+AGG | 0.477036 | 1_2:+21329782 | Msa0062160:CDS |
AACCAGAGAGGTAGTGCTGC+AGG | 0.477376 | 1_2:+21329758 | Msa0062160:CDS |
CACGTTAACTGGGGAGATAT+CGG | 0.483067 | 1_2:+21328801 | Msa0062160:CDS |
GCACCAGGAGTAAGGTTTGA+AGG | 0.495370 | 1_2:-21328675 | None:intergenic |
GGGTTGCAATAGTCGAAAGC+TGG | 0.499258 | 1_2:-21328353 | None:intergenic |
CCCTTCAGTACGGCTTCTCA+TGG | 0.501141 | 1_2:-21328577 | None:intergenic |
TAACAGCAGAAGAAAGAGAA+AGG | 0.504497 | 1_2:+21329357 | Msa0062160:CDS |
GAACTGAACACCTATATCTC+TGG | 0.504709 | 1_2:-21328859 | None:intergenic |
AACCTGCAGCACTACCTCTC+TGG | 0.506330 | 1_2:-21329760 | None:intergenic |
ACTCTACAGAATGGATTGGT+TGG | 0.509007 | 1_2:-21329407 | None:intergenic |
TAAACTCAACCACGTTAACT+GGG | 0.517161 | 1_2:+21328791 | Msa0062160:CDS |
TACCAATTGTCTAGTTTGAA+GGG | 0.519590 | 1_2:-21326568 | None:intergenic |
CCTGTTCGCTGCCTATATAA+AGG | 0.526982 | 1_2:+21329645 | Msa0062160:CDS |
TCACCTTCAAACCTTACTCC+TGG | 0.530653 | 1_2:+21328672 | Msa0062160:CDS |
CATAGCAAGGCCCTTCAGTA+CGG | 0.538460 | 1_2:-21328587 | None:intergenic |
AGACGCCAGACAGTGCCATC+AGG | 0.540335 | 1_2:-21328384 | None:intergenic |
AACAGCAGAAGAAAGAGAAA+GGG | 0.540440 | 1_2:+21329358 | Msa0062160:CDS |
GTCTAGTTTGAAGGGATGAA+GGG | 0.543517 | 1_2:-21326560 | None:intergenic |
GGTTTGAAGGTGATGAATCC+AGG | 0.544026 | 1_2:-21328662 | None:intergenic |
GGATGATAATTTGCATAGCA+AGG | 0.545527 | 1_2:-21328600 | None:intergenic |
AGAATGAGCTTGTGAAAAGA+AGG | 0.547922 | 1_2:-21326537 | None:intergenic |
ATTGCAGAATTTGTTTAATG+GGG | 0.548631 | 1_2:+21328764 | Msa0062160:CDS |
TCCTGGTGCATTGCAAGACA+AGG | 0.548892 | 1_2:+21328689 | Msa0062160:CDS |
ACCTTGTCTTGCAATGCACC+AGG | 0.549286 | 1_2:-21328690 | None:intergenic |
ATTCAAAGCATAATCTTGGA+AGG | 0.549766 | 1_2:-21326483 | None:intergenic |
TTGTGTAACTGTAGGTGCAC+TGG | 0.551946 | 1_2:+21329259 | Msa0062160:intron |
TGATTGAAAGTTGAAAACTT+TGG | 0.552047 | 1_2:-21326457 | None:intergenic |
GCCATGAGAAGCCGTACTGA+AGG | 0.554864 | 1_2:+21328576 | Msa0062160:CDS |
CTGACACGGTGCTGCAAGTG+AGG | 0.554904 | 1_2:-21329873 | None:intergenic |
TTGCGCTATCCTAATGAGGA+AGG | 0.562431 | 1_2:+21328921 | Msa0062160:CDS |
CTGATTTGGTTGAGCTGACA+CGG | 0.566401 | 1_2:-21329887 | None:intergenic |
TTAGAGAACAATTTAGGGGA+AGG | 0.568521 | 1_2:+21329708 | Msa0062160:CDS |
GGCCGAGCAAAGTTAAGCCA+AGG | 0.570951 | 1_2:+21329669 | Msa0062160:CDS |
AACCGAATTTGGTTTGTCGA+TGG | 0.576855 | 1_2:+21328426 | Msa0062160:CDS |
TGCAGAATTTGTTTAATGGG+GGG | 0.577486 | 1_2:+21328766 | Msa0062160:CDS |
TTGCAGAATTTGTTTAATGG+GGG | 0.578544 | 1_2:+21328765 | Msa0062160:CDS |
TGCGCTATCCTAATGAGGAA+GGG | 0.580496 | 1_2:+21328922 | Msa0062160:CDS |
GAAATTGCGCTATCCTAATG+AGG | 0.581484 | 1_2:+21328917 | Msa0062160:CDS |
TTTGCAGAAAAGAATTTGAA+CGG | 0.582980 | 1_2:+21329576 | Msa0062160:CDS |
GGTTGCAATAGTCGAAAGCT+GGG | 0.584695 | 1_2:-21328352 | None:intergenic |
TGATGAATCCAGGAATTCAA+AGG | 0.585718 | 1_2:-21328652 | None:intergenic |
GCGCTATCCTAATGAGGAAG+GGG | 0.586754 | 1_2:+21328923 | Msa0062160:CDS |
GACAACTCTACAGAATGGAT+TGG | 0.593488 | 1_2:-21329411 | None:intergenic |
TTTGGCTTGGCTGTGAAGAA+GGG | 0.594915 | 1_2:-21329824 | None:intergenic |
CGATATCTCCCCAGTTAACG+TGG | 0.595115 | 1_2:-21328800 | None:intergenic |
TAGAAAGTATCCAATGCCAA+TGG | 0.595339 | 1_2:-21328475 | None:intergenic |
CACTGCTGAAAATGATGAGG+AGG | 0.595680 | 1_2:+21329286 | Msa0062160:CDS |
CGCAGGACAACTCTACAGAA+TGG | 0.599765 | 1_2:-21329416 | None:intergenic |
GCAACCCTCACTGTTCCTGA+TGG | 0.602871 | 1_2:+21328369 | Msa0062160:CDS |
TTAAGCTTCAGATCTCTGAT+GGG | 0.604595 | 1_2:+21329613 | Msa0062160:CDS |
AGAAAACTTCAAGAAAGAAG+CGG | 0.610439 | 1_2:+21328964 | Msa0062160:CDS |
GCGCAATTTCAATCCTTCAG+TGG | 0.610517 | 1_2:-21328904 | None:intergenic |
GATGGAGTATGATTCTTCGC+TGG | 0.611475 | 1_2:-21328741 | None:intergenic |
CCATGAGAAGCCGTACTGAA+GGG | 0.612450 | 1_2:+21328577 | Msa0062160:CDS |
AGATCTCTGATGGGAGACAG+TGG | 0.629937 | 1_2:+21329622 | Msa0062160:CDS |
TACATTAGAGAACAATTTAG+GGG | 0.630150 | 1_2:+21329704 | Msa0062160:CDS |
GTGTAAAAGAGGACGAGTCA+GGG | 0.630504 | 1_2:+21329793 | Msa0062160:CDS |
GAGCAAAGTTAAGCCAAGGA+TGG | 0.643193 | 1_2:+21329673 | Msa0062160:CDS |
AAGTTCATGAGTCTATCACT+CGG | 0.644235 | 1_2:-21326291 | None:intergenic |
TGACACGGTGCTGCAAGTGA+GGG | 0.655075 | 1_2:-21329872 | None:intergenic |
GTTCGCTGCCTATATAAAGG+AGG | 0.657822 | 1_2:+21329648 | Msa0062160:CDS |
AGTGCCATCAGGAACAGTGA+GGG | 0.674235 | 1_2:-21328373 | None:intergenic |
TGAGCTGCTTAGAACCAGAG+AGG | 0.682743 | 1_2:+21329746 | Msa0062160:CDS |
AGCCACTGCTGAAAATGATG+AGG | 0.685162 | 1_2:+21329283 | Msa0062160:CDS |
CAGTGCCATCAGGAACAGTG+AGG | 0.694859 | 1_2:-21328374 | None:intergenic |
TTGTGAAAAGAAGGACGAGG+AGG | 0.697547 | 1_2:-21326528 | None:intergenic |
AGCTTGTGAAAAGAAGGACG+AGG | 0.710821 | 1_2:-21326531 | None:intergenic |
AAACTCAACCACGTTAACTG+GGG | 0.714026 | 1_2:+21328792 | Msa0062160:CDS |
GTTAACTGGGGAGATATCGG+TGG | 0.726802 | 1_2:+21328804 | Msa0062160:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTATTATTATTAAATAAAT+TGG | - | chr1_2:21328055-21328074 | None:intergenic | 0.0% |
!!! | TTTTTTGTTTGTTTAATTTA+AGG | + | chr1_2:21326346-21326365 | Msa0062160:five_prime_UTR | 10.0% |
!!! | TCATTGATTTTTTTTTGAAT+TGG | + | chr1_2:21326610-21326629 | Msa0062160:intron | 15.0% |
!!! | CATTGATTTTTTTTTGAATT+GGG | + | chr1_2:21326611-21326630 | Msa0062160:intron | 15.0% |
!! | ATCCAAACTTTATAAAAAAA+GGG | - | chr1_2:21326757-21326776 | None:intergenic | 15.0% |
!! | AATCCAAACTTTATAAAAAA+AGG | - | chr1_2:21326758-21326777 | None:intergenic | 15.0% |
!!! | TATAAAGTTTGGATTTTTTT+AGG | + | chr1_2:21326763-21326782 | Msa0062160:intron | 15.0% |
!!! | CACATATATTAATGATTTTA+AGG | - | chr1_2:21327114-21327133 | None:intergenic | 15.0% |
!! | CTTAAAATCATTAATATATG+TGG | + | chr1_2:21327112-21327131 | Msa0062160:intron | 15.0% |
!!! | TCTTTTGATCTTTTTAATTT+TGG | + | chr1_2:21327673-21327692 | Msa0062160:intron | 15.0% |
!!! | CTTTTTAATTTTGGTAAAAA+AGG | + | chr1_2:21327682-21327701 | Msa0062160:intron | 15.0% |
!!! | TATGAATTTAAGTTTACATA+AGG | + | chr1_2:21328119-21328138 | Msa0062160:intron | 15.0% |
!!! | ATAATTTTCTTAGGAAATAT+GGG | + | chr1_2:21328328-21328347 | Msa0062160:CDS | 15.0% |
!! | TTATGATTGTTGTAAGAAAA+GGG | + | chr1_2:21326670-21326689 | Msa0062160:intron | 20.0% |
!! | TCCAAACTTTATAAAAAAAG+GGG | - | chr1_2:21326756-21326775 | None:intergenic | 20.0% |
!! | TTTAATTGAGACTATCATAT+TGG | + | chr1_2:21327268-21327287 | Msa0062160:intron | 20.0% |
!!! | AAGCATAAAAGTATTTTTGT+TGG | - | chr1_2:21328100-21328119 | None:intergenic | 20.0% |
!! | TTATGAGCATTACTAATATT+TGG | + | chr1_2:21328269-21328288 | Msa0062160:intron | 20.0% |
!! | TATTTCCTAAGAAAATTATC+TGG | - | chr1_2:21328327-21328346 | None:intergenic | 20.0% |
!!! | GATAATTTTCTTAGGAAATA+TGG | + | chr1_2:21328327-21328346 | Msa0062160:CDS | 20.0% |
!!! | TAATTTTCTTAGGAAATATG+GGG | + | chr1_2:21328329-21328348 | Msa0062160:CDS | 20.0% |
!!! | AATTTAATTTGTGTAACTGT+AGG | + | chr1_2:21329251-21329270 | Msa0062160:intron | 20.0% |
!! | TTTATATAGAGGATGTATAA+TGG | + | chr1_2:21329448-21329467 | Msa0062160:intron | 20.0% |
!! | TTTACATTAGAGAACAATTT+AGG | + | chr1_2:21329702-21329721 | Msa0062160:CDS | 20.0% |
!! | TTACATTAGAGAACAATTTA+GGG | + | chr1_2:21329703-21329722 | Msa0062160:CDS | 20.0% |
! | AGACTCATGAACTTAAAATT+AGG | + | chr1_2:21326300-21326319 | Msa0062160:five_prime_UTR | 25.0% |
! | TTTGACTAAAAAGCTGAATA+GGG | + | chr1_2:21326383-21326402 | Msa0062160:five_prime_UTR | 25.0% |
! | TTACTCAGATCTAAATTGTT+GGG | - | chr1_2:21326432-21326451 | None:intergenic | 25.0% |
! | ATTACTCAGATCTAAATTGT+TGG | - | chr1_2:21326433-21326452 | None:intergenic | 25.0% |
! | TGATTGAAAGTTGAAAACTT+TGG | - | chr1_2:21326460-21326479 | None:intergenic | 25.0% |
!!! | TTGTGTTTCATGTTTTTGAT+TGG | + | chr1_2:21326635-21326654 | Msa0062160:intron | 25.0% |
! | GTTATGATTGTTGTAAGAAA+AGG | + | chr1_2:21326669-21326688 | Msa0062160:intron | 25.0% |
!! | TTGTAAGAAAAGGGTTTTTA+GGG | + | chr1_2:21326679-21326698 | Msa0062160:intron | 25.0% |
!!! | TTATAAAAAAAGGGGTATCA+GGG | - | chr1_2:21326748-21326767 | None:intergenic | 25.0% |
!!! | TTTATAAAAAAAGGGGTATC+AGG | - | chr1_2:21326749-21326768 | None:intergenic | 25.0% |
!!! | ACCCCTTTTTTTATAAAGTT+TGG | + | chr1_2:21326752-21326771 | Msa0062160:intron | 25.0% |
!!! | TTTAGGTTTTGTGATTTTTC+TGG | + | chr1_2:21326911-21326930 | Msa0062160:intron | 25.0% |
!!! | TGTTGAAATTTTGATAAACC+TGG | + | chr1_2:21326938-21326957 | Msa0062160:intron | 25.0% |
!! | TTTTAGCCCTAAAATTGAAT+TGG | + | chr1_2:21326973-21326992 | Msa0062160:intron | 25.0% |
!! | AACCAACCAATTCAATTTTA+GGG | - | chr1_2:21326982-21327001 | None:intergenic | 25.0% |
!! | TAACCAACCAATTCAATTTT+AGG | - | chr1_2:21326983-21327002 | None:intergenic | 25.0% |
! | AGTCTCAATTAAAACACATT+TGG | - | chr1_2:21327261-21327280 | None:intergenic | 25.0% |
! | AAAAGATCAAAAGAAGTTCA+AGG | - | chr1_2:21327667-21327686 | None:intergenic | 25.0% |
! | AAAACCTCTTCTATTAAGTA+TGG | + | chr1_2:21327742-21327761 | Msa0062160:intron | 25.0% |
! | TTCTATTAAGTATGGAAAGT+TGG | + | chr1_2:21327750-21327769 | Msa0062160:intron | 25.0% |
! | AAAAACTACTCATTTCCAAA+TGG | - | chr1_2:21327793-21327812 | None:intergenic | 25.0% |
! | ATTAACTACCATGCTAAAAA+CGG | - | chr1_2:21327830-21327849 | None:intergenic | 25.0% |
! | ATAAACATGGAATCATAACA+CGG | - | chr1_2:21328190-21328209 | None:intergenic | 25.0% |
! | AGACAATGAAATCATAAACA+TGG | - | chr1_2:21328203-21328222 | None:intergenic | 25.0% |
!!! | AATGTTATTTTCAATTGCAG+AGG | + | chr1_2:21328298-21328317 | Msa0062160:intron | 25.0% |
!! | TTTCTAGTATTCACTTATGA+AGG | + | chr1_2:21328492-21328511 | Msa0062160:CDS | 25.0% |
! | TCTTCAATGTCTTCAAAAAT+AGG | - | chr1_2:21328624-21328643 | None:intergenic | 25.0% |
! | TTAAACAAATTCTGCAATGA+TGG | - | chr1_2:21328762-21328781 | None:intergenic | 25.0% |
!! | TCATTGCAGAATTTGTTTAA+TGG | + | chr1_2:21328762-21328781 | Msa0062160:CDS | 25.0% |
!! | CATTGCAGAATTTGTTTAAT+GGG | + | chr1_2:21328763-21328782 | Msa0062160:CDS | 25.0% |
!! | ATTGCAGAATTTGTTTAATG+GGG | + | chr1_2:21328764-21328783 | Msa0062160:CDS | 25.0% |
! | CATCCTCTATATAAATAAGA+GGG | - | chr1_2:21329443-21329462 | None:intergenic | 25.0% |
! | ACATCCTCTATATAAATAAG+AGG | - | chr1_2:21329444-21329463 | None:intergenic | 25.0% |
! | TTTGCAGAAAAGAATTTGAA+CGG | + | chr1_2:21329576-21329595 | Msa0062160:CDS | 25.0% |
! | TACATTAGAGAACAATTTAG+GGG | + | chr1_2:21329704-21329723 | Msa0062160:CDS | 25.0% |
GTTTGACTAAAAAGCTGAAT+AGG | + | chr1_2:21326382-21326401 | Msa0062160:five_prime_UTR | 30.0% | |
ATTCAAAGCATAATCTTGGA+AGG | - | chr1_2:21326486-21326505 | None:intergenic | 30.0% | |
AGAGATTCAAAGCATAATCT+TGG | - | chr1_2:21326490-21326509 | None:intergenic | 30.0% | |
! | TACCAATTGTCTAGTTTGAA+GGG | - | chr1_2:21326571-21326590 | None:intergenic | 30.0% |
! | TTACCAATTGTCTAGTTTGA+AGG | - | chr1_2:21326572-21326591 | None:intergenic | 30.0% |
! | GTTGTAAGAAAAGGGTTTTT+AGG | + | chr1_2:21326678-21326697 | Msa0062160:intron | 30.0% |
!!! | AGGGTTTTGGTTGATTTTTT+AGG | + | chr1_2:21326698-21326717 | Msa0062160:intron | 30.0% |
!!! | GGGTTTTGGTTGATTTTTTA+GGG | + | chr1_2:21326699-21326718 | Msa0062160:intron | 30.0% |
AACTCAGTGATCAAAATCAT+GGG | - | chr1_2:21326801-21326820 | None:intergenic | 30.0% | |
AAACTCAGTGATCAAAATCA+TGG | - | chr1_2:21326802-21326821 | None:intergenic | 30.0% | |
!! | ATGATTTTGATCACTGAGTT+TGG | + | chr1_2:21326801-21326820 | Msa0062160:intron | 30.0% |
TCTGTTATGATTCTTGATGA+AGG | + | chr1_2:21326828-21326847 | Msa0062160:intron | 30.0% | |
CTGTTATGATTCTTGATGAA+GGG | + | chr1_2:21326829-21326848 | Msa0062160:intron | 30.0% | |
!! | TGTTTGATTCAGTGTTGTTT+AGG | + | chr1_2:21326894-21326913 | Msa0062160:intron | 30.0% |
!! | TGATTTTAAGGAAAACATCG+AGG | - | chr1_2:21327102-21327121 | None:intergenic | 30.0% |
TCTTCTCTTTCACTTAAAAC+AGG | - | chr1_2:21327197-21327216 | None:intergenic | 30.0% | |
TTTAACTACCATGCTGAAAA+TGG | - | chr1_2:21327414-21327433 | None:intergenic | 30.0% | |
! | ATTTTCAGTCACTCATTCAA+AGG | - | chr1_2:21327565-21327584 | None:intergenic | 30.0% |
AAAAGAAGTTCAAGGATTTG+GGG | - | chr1_2:21327659-21327678 | None:intergenic | 30.0% | |
CAAAAGAAGTTCAAGGATTT+GGG | - | chr1_2:21327660-21327679 | None:intergenic | 30.0% | |
TCAAAAGAAGTTCAAGGATT+TGG | - | chr1_2:21327661-21327680 | None:intergenic | 30.0% | |
! | GGTTTTTCATTTGCATATCT+AGG | - | chr1_2:21327728-21327747 | None:intergenic | 30.0% |
CTTTCCATACTTAATAGAAG+AGG | - | chr1_2:21327749-21327768 | None:intergenic | 30.0% | |
! | TTTTTAACAGGTCATGTACT+CGG | - | chr1_2:21327940-21327959 | None:intergenic | 30.0% |
!!! | AAAGGTGCGTTTTTTTTAAC+AGG | - | chr1_2:21327952-21327971 | None:intergenic | 30.0% |
TTTAAACTCGAGATTTGACT+CGG | - | chr1_2:21328234-21328253 | None:intergenic | 30.0% | |
! | GGATTCCAGATAATTTTCTT+AGG | + | chr1_2:21328319-21328338 | Msa0062160:CDS | 30.0% |
! | TTGCAGAATTTGTTTAATGG+GGG | + | chr1_2:21328765-21328784 | Msa0062160:CDS | 30.0% |
AGAAAACTTCAAGAAAGAAG+CGG | + | chr1_2:21328964-21328983 | Msa0062160:CDS | 30.0% | |
CTTATCTAAAAGAGCTTACT+TGG | - | chr1_2:21328999-21329018 | None:intergenic | 30.0% | |
ATGTAAATTCATACCATCCT+TGG | - | chr1_2:21329689-21329708 | None:intergenic | 30.0% | |
! | TACTTTGTTTCGTGTAAAAG+AGG | + | chr1_2:21329782-21329801 | Msa0062160:CDS | 30.0% |
AAGTTCATGAGTCTATCACT+CGG | - | chr1_2:21326294-21326313 | None:intergenic | 35.0% | |
AAAAAGCTGAATAGGGTTTG+AGG | + | chr1_2:21326390-21326409 | Msa0062160:five_prime_UTR | 35.0% | |
AGAATGAGCTTGTGAAAAGA+AGG | - | chr1_2:21326540-21326559 | None:intergenic | 35.0% | |
ATCCCTTCAAACTAGACAAT+TGG | + | chr1_2:21326566-21326585 | Msa0062160:CDS | 35.0% | |
!!! | GAAAAGGGTTTTTAGGGTTT+TGG | + | chr1_2:21326685-21326704 | Msa0062160:intron | 35.0% |
!!! | GGTTGATTTTTTAGGGTATG+TGG | + | chr1_2:21326706-21326725 | Msa0062160:intron | 35.0% |
AGCCCTAAAATTGAATTGGT+TGG | + | chr1_2:21326977-21326996 | Msa0062160:intron | 35.0% | |
!! | GTTAGTTTGTTTGTGTCTTG+TGG | + | chr1_2:21326999-21327018 | Msa0062160:intron | 35.0% |
CACTTAGTAAGTATGACCTT+TGG | + | chr1_2:21327338-21327357 | Msa0062160:intron | 35.0% | |
TACTGGCAATAACAATCCAA+AGG | - | chr1_2:21327357-21327376 | None:intergenic | 35.0% | |
TGTTATTGCCAGTAGCAATT+TGG | + | chr1_2:21327363-21327382 | Msa0062160:intron | 35.0% | |
ACACATTTCCAAATTGCTAC+TGG | - | chr1_2:21327374-21327393 | None:intergenic | 35.0% | |
! | ATGAATCTCCATTTTCAGCA+TGG | + | chr1_2:21327403-21327422 | Msa0062160:intron | 35.0% |
! | GGTTTTACATTTGCAGATCT+AGG | - | chr1_2:21327598-21327617 | None:intergenic | 35.0% |
! | AAACCTTTTCTCACCAGAAA+AGG | + | chr1_2:21327631-21327650 | Msa0062160:intron | 35.0% |
TTGCATATCTAGGAAGTTTG+AGG | - | chr1_2:21327718-21327737 | None:intergenic | 35.0% | |
!!! | ATGAATCTCCGTTTTTAGCA+TGG | + | chr1_2:21327819-21327838 | Msa0062160:intron | 35.0% |
!! | AATTGGTTCGACCTAAGTAT+GGG | - | chr1_2:21328038-21328057 | None:intergenic | 35.0% |
!! | AAATTGGTTCGACCTAAGTA+TGG | - | chr1_2:21328039-21328058 | None:intergenic | 35.0% |
AAAAGGTTGACAACCGAATT+TGG | + | chr1_2:21328415-21328434 | Msa0062160:CDS | 35.0% | |
TTTGTTCAACGTTACTCCAT+TGG | + | chr1_2:21328459-21328478 | Msa0062160:CDS | 35.0% | |
!! | TAGAAAGTATCCAATGCCAA+TGG | - | chr1_2:21328478-21328497 | None:intergenic | 35.0% |
! | GGATGATAATTTGCATAGCA+AGG | - | chr1_2:21328603-21328622 | None:intergenic | 35.0% |
TGATGAATCCAGGAATTCAA+AGG | - | chr1_2:21328655-21328674 | None:intergenic | 35.0% | |
!! | TTGCAAGACAAGGTTTTTAG+TGG | + | chr1_2:21328699-21328718 | Msa0062160:CDS | 35.0% |
!!! | CAAGGTTTTTAGTGGATCTT+TGG | + | chr1_2:21328707-21328726 | Msa0062160:CDS | 35.0% |
! | TGCAGAATTTGTTTAATGGG+GGG | + | chr1_2:21328766-21328785 | Msa0062160:CDS | 35.0% |
TAAACTCAACCACGTTAACT+GGG | + | chr1_2:21328791-21328810 | Msa0062160:CDS | 35.0% | |
TATATCTCTGGTTGACTGAA+TGG | - | chr1_2:21328850-21328869 | None:intergenic | 35.0% | |
ATTCAGTCAACCAGAGATAT+AGG | + | chr1_2:21328849-21328868 | Msa0062160:CDS | 35.0% | |
GAGTTTAAAAAGTCCACTGA+AGG | + | chr1_2:21328891-21328910 | Msa0062160:CDS | 35.0% | |
TTATTAACCCCTTCCTCATT+AGG | - | chr1_2:21328933-21328952 | None:intergenic | 35.0% | |
!! | GCACTGACATTTTAGATCAA+AGG | + | chr1_2:21329048-21329067 | Msa0062160:intron | 35.0% |
!!! | TCACCTTTTGAAATGATGAC+CGG | + | chr1_2:21329146-21329165 | Msa0062160:intron | 35.0% |
TAACAGCAGAAGAAAGAGAA+AGG | + | chr1_2:21329357-21329376 | Msa0062160:CDS | 35.0% | |
AACAGCAGAAGAAAGAGAAA+GGG | + | chr1_2:21329358-21329377 | Msa0062160:CDS | 35.0% | |
GAAATGTCGAAGAAGACTAA+AGG | - | chr1_2:21329506-21329525 | None:intergenic | 35.0% | |
! | CAAATTCTTTTCTGCAAAGC+AGG | - | chr1_2:21329574-21329593 | None:intergenic | 35.0% |
AAGAATTTGAACGGTGTTTC+AGG | + | chr1_2:21329585-21329604 | Msa0062160:CDS | 35.0% | |
ATTAAGCTTCAGATCTCTGA+TGG | + | chr1_2:21329612-21329631 | Msa0062160:CDS | 35.0% | |
TTAAGCTTCAGATCTCTGAT+GGG | + | chr1_2:21329613-21329632 | Msa0062160:CDS | 35.0% | |
TTAGAGAACAATTTAGGGGA+AGG | + | chr1_2:21329708-21329727 | Msa0062160:CDS | 35.0% | |
! | TTTTTGCATGGCTCACATTT+TGG | - | chr1_2:21329845-21329864 | None:intergenic | 35.0% |
! | GTCTAGTTTGAAGGGATGAA+GGG | - | chr1_2:21326563-21326582 | None:intergenic | 40.0% |
! | TGTCTAGTTTGAAGGGATGA+AGG | - | chr1_2:21326564-21326583 | None:intergenic | 40.0% |
CTAAAATCAACTCAGCAACC+AGG | - | chr1_2:21326959-21326978 | None:intergenic | 40.0% | |
ATCTCAAACCTAATCGCAGA+TGG | + | chr1_2:21327497-21327516 | Msa0062160:intron | 40.0% | |
AAATTAACACACACGACCAC+AGG | - | chr1_2:21327529-21327548 | None:intergenic | 40.0% | |
TGGTCGTGTGTGTTAATTTC+AGG | + | chr1_2:21327530-21327549 | Msa0062160:intron | 40.0% | |
!! | AAAGGTTTTCTGGTGAGAAG+AGG | - | chr1_2:21327619-21327638 | None:intergenic | 40.0% |
! | TCTGGTGAGAAAAGGTTTTC+TGG | - | chr1_2:21327629-21327648 | None:intergenic | 40.0% |
CTAGGAAGTTTGAGGATTTG+CGG | - | chr1_2:21327710-21327729 | None:intergenic | 40.0% | |
! | GAAAGTTGGATTGCTATTGC+TGG | + | chr1_2:21327764-21327783 | Msa0062160:intron | 40.0% |
ATATCGCACCTAATCACTGA+TGG | + | chr1_2:21327908-21327927 | Msa0062160:intron | 40.0% | |
GGCAAAAACCATCAGTGATT+AGG | - | chr1_2:21327919-21327938 | None:intergenic | 40.0% | |
CAAGGAAGTTTGAGGATTCT+CGG | - | chr1_2:21327985-21328004 | None:intergenic | 40.0% | |
!! | AACCGAATTTGGTTTGTCGA+TGG | + | chr1_2:21328426-21328445 | Msa0062160:CDS | 40.0% |
AGCCATCGACAAACCAAATT+CGG | - | chr1_2:21328431-21328450 | None:intergenic | 40.0% | |
!! | TATCGACTCCTTTGAATTCC+TGG | + | chr1_2:21328644-21328663 | Msa0062160:CDS | 40.0% |
CTAAACTCAACCACGTTAAC+TGG | + | chr1_2:21328790-21328809 | Msa0062160:CDS | 40.0% | |
AAACTCAACCACGTTAACTG+GGG | + | chr1_2:21328792-21328811 | Msa0062160:CDS | 40.0% | |
GAACTGAACACCTATATCTC+TGG | - | chr1_2:21328862-21328881 | None:intergenic | 40.0% | |
GAAATTGCGCTATCCTAATG+AGG | + | chr1_2:21328917-21328936 | Msa0062160:CDS | 40.0% | |
AATGATGTGTGTCAGACACT+CGG | - | chr1_2:21329079-21329098 | None:intergenic | 40.0% | |
ACACCGGTCATCATTTCAAA+AGG | - | chr1_2:21329152-21329171 | None:intergenic | 40.0% | |
!! | ACTCTACAGAATGGATTGGT+TGG | - | chr1_2:21329410-21329429 | None:intergenic | 40.0% |
GACAACTCTACAGAATGGAT+TGG | - | chr1_2:21329414-21329433 | None:intergenic | 40.0% | |
TATATAAATAAGAGGGCCGC+AGG | - | chr1_2:21329436-21329455 | None:intergenic | 40.0% | |
! | CGGCCCTCTTATTTATATAG+AGG | + | chr1_2:21329437-21329456 | Msa0062160:intron | 40.0% |
! | TTCTTTTCTGCAAAGCAGGA+AGG | - | chr1_2:21329570-21329589 | None:intergenic | 40.0% |
ATCCTTGGCTTAACTTTGCT+CGG | - | chr1_2:21329674-21329693 | None:intergenic | 40.0% | |
! | GAGGGTTCAACATTTTTGCA+TGG | - | chr1_2:21329857-21329876 | None:intergenic | 40.0% |
CTGAATAGGGTTTGAGGAGA+AGG | + | chr1_2:21326396-21326415 | Msa0062160:five_prime_UTR | 45.0% | |
TTGTGAAAAGAAGGACGAGG+AGG | - | chr1_2:21326531-21326550 | None:intergenic | 45.0% | |
AGCTTGTGAAAAGAAGGACG+AGG | - | chr1_2:21326534-21326553 | None:intergenic | 45.0% | |
CTTTGAACGAGAAGTTCTCG+TGG | + | chr1_2:21327026-21327045 | Msa0062160:intron | 45.0% | |
GGCAAAAACCATCTGCGATT+AGG | - | chr1_2:21327508-21327527 | None:intergenic | 45.0% | |
! | CACTCATTCAAAGGTGCGTT+CGG | - | chr1_2:21327556-21327575 | None:intergenic | 45.0% |
TTGCAGATCTAGGAAGTTCG+AGG | - | chr1_2:21327588-21327607 | None:intergenic | 45.0% | |
!! | GCTCCTTTTCTGGTGAGAAA+AGG | - | chr1_2:21327637-21327656 | None:intergenic | 45.0% |
TGCTATTGCTGGTAGCCATT+TGG | + | chr1_2:21327775-21327794 | Msa0062160:intron | 45.0% | |
ATTCTCGGTCACACGTTCAA+AGG | - | chr1_2:21327970-21327989 | None:intergenic | 45.0% | |
CGAGAATCCTCAAACTTCCT+TGG | + | chr1_2:21327983-21328002 | Msa0062160:intron | 45.0% | |
GCAAAGACCAAGGAAGTTTG+AGG | - | chr1_2:21327993-21328012 | None:intergenic | 45.0% | |
GGTTGCAATAGTCGAAAGCT+GGG | - | chr1_2:21328355-21328374 | None:intergenic | 45.0% | |
! | CTGGCGTCTAGGATTGAAAA+AGG | + | chr1_2:21328398-21328417 | Msa0062160:CDS | 45.0% |
!! | GAATTTGGTTTGTCGATGGC+TGG | + | chr1_2:21328430-21328449 | Msa0062160:CDS | 45.0% |
CAACGTTACTCCATTGGCAT+TGG | + | chr1_2:21328465-21328484 | Msa0062160:CDS | 45.0% | |
GGTTTGAAGGTGATGAATCC+AGG | - | chr1_2:21328665-21328684 | None:intergenic | 45.0% | |
TCACCTTCAAACCTTACTCC+TGG | + | chr1_2:21328672-21328691 | Msa0062160:CDS | 45.0% | |
GATGGAGTATGATTCTTCGC+TGG | - | chr1_2:21328744-21328763 | None:intergenic | 45.0% | |
CACGTTAACTGGGGAGATAT+CGG | + | chr1_2:21328801-21328820 | Msa0062160:CDS | 45.0% | |
GCGCAATTTCAATCCTTCAG+TGG | - | chr1_2:21328907-21328926 | None:intergenic | 45.0% | |
TTGCGCTATCCTAATGAGGA+AGG | + | chr1_2:21328921-21328940 | Msa0062160:CDS | 45.0% | |
TGCGCTATCCTAATGAGGAA+GGG | + | chr1_2:21328922-21328941 | Msa0062160:CDS | 45.0% | |
ATGATGTGTGTCAGACACTC+GGG | - | chr1_2:21329078-21329097 | None:intergenic | 45.0% | |
TTGTGTAACTGTAGGTGCAC+TGG | + | chr1_2:21329259-21329278 | Msa0062160:intron | 45.0% | |
AGCCACTGCTGAAAATGATG+AGG | + | chr1_2:21329283-21329302 | Msa0062160:CDS | 45.0% | |
! | CTCCTCATCATTTTCAGCAG+TGG | - | chr1_2:21329288-21329307 | None:intergenic | 45.0% |
CACTGCTGAAAATGATGAGG+AGG | + | chr1_2:21329286-21329305 | Msa0062160:CDS | 45.0% | |
CATTCTGTAGAGTTGTCCTG+CGG | + | chr1_2:21329417-21329436 | Msa0062160:intron | 45.0% | |
CAAAGCAGGAAGGCAAATAC+TGG | - | chr1_2:21329560-21329579 | None:intergenic | 45.0% | |
CCTTTATATAGGCAGCGAAC+AGG | - | chr1_2:21329648-21329667 | None:intergenic | 45.0% | |
CCTGTTCGCTGCCTATATAA+AGG | + | chr1_2:21329645-21329664 | Msa0062160:CDS | 45.0% | |
GTTCGCTGCCTATATAAAGG+AGG | + | chr1_2:21329648-21329667 | Msa0062160:CDS | 45.0% | |
TTGCTCGGCCTCCTTTATAT+AGG | - | chr1_2:21329659-21329678 | None:intergenic | 45.0% | |
GAGCAAAGTTAAGCCAAGGA+TGG | + | chr1_2:21329673-21329692 | Msa0062160:CDS | 45.0% | |
GTGTAAAAGAGGACGAGTCA+GGG | + | chr1_2:21329793-21329812 | Msa0062160:CDS | 45.0% | |
!! | TTTGGCTTGGCTGTGAAGAA+GGG | - | chr1_2:21329827-21329846 | None:intergenic | 45.0% |
!!! | TTTTGGCTTGGCTGTGAAGA+AGG | - | chr1_2:21329828-21329847 | None:intergenic | 45.0% |
!! | CTGATTTGGTTGAGCTGACA+CGG | - | chr1_2:21329890-21329909 | None:intergenic | 45.0% |
! | TCGCAGATGGTTTTTGCCTG+TGG | + | chr1_2:21327510-21327529 | Msa0062160:intron | 50.0% |
!! | AGGATTTGGGGCTCCTTTTC+TGG | - | chr1_2:21327647-21327666 | None:intergenic | 50.0% |
! | CTTCCTTGGTCTTTGCTCGT+TGG | + | chr1_2:21327997-21328016 | Msa0062160:intron | 50.0% |
CTACCAACGAGCAAAGACCA+AGG | - | chr1_2:21328003-21328022 | None:intergenic | 50.0% | |
!! | CTCGTTGGTAGTGCACCATT+GGG | + | chr1_2:21328012-21328031 | Msa0062160:intron | 50.0% |
GGGTTGCAATAGTCGAAAGC+TGG | - | chr1_2:21328356-21328375 | None:intergenic | 50.0% | |
AGTGCCATCAGGAACAGTGA+GGG | - | chr1_2:21328376-21328395 | None:intergenic | 50.0% | |
CCATGAGAAGCCGTACTGAA+GGG | + | chr1_2:21328577-21328596 | Msa0062160:CDS | 50.0% | |
CATAGCAAGGCCCTTCAGTA+CGG | - | chr1_2:21328590-21328609 | None:intergenic | 50.0% | |
GCACCAGGAGTAAGGTTTGA+AGG | - | chr1_2:21328678-21328697 | None:intergenic | 50.0% | |
CTTGCAATGCACCAGGAGTA+AGG | - | chr1_2:21328686-21328705 | None:intergenic | 50.0% | |
TCCTGGTGCATTGCAAGACA+AGG | + | chr1_2:21328689-21328708 | Msa0062160:CDS | 50.0% | |
ACCTTGTCTTGCAATGCACC+AGG | - | chr1_2:21328693-21328712 | None:intergenic | 50.0% | |
CGATATCTCCCCAGTTAACG+TGG | - | chr1_2:21328803-21328822 | None:intergenic | 50.0% | |
GTTAACTGGGGAGATATCGG+TGG | + | chr1_2:21328804-21328823 | Msa0062160:CDS | 50.0% | |
GCGCTATCCTAATGAGGAAG+GGG | + | chr1_2:21328923-21328942 | Msa0062160:CDS | 50.0% | |
AACCACACGTGTCAGTGTAG+CGG | - | chr1_2:21329113-21329132 | None:intergenic | 50.0% | |
CGACACTGAGATGACAACAC+CGG | - | chr1_2:21329168-21329187 | None:intergenic | 50.0% | |
AGTGTCGTGTCTTCCTGTGT+CGG | + | chr1_2:21329181-21329200 | Msa0062160:intron | 50.0% | |
! | CTTCCTGTGTCGGTGTTTCA+TGG | + | chr1_2:21329191-21329210 | Msa0062160:intron | 50.0% |
TAGCCATGAAACACCGACAC+AGG | - | chr1_2:21329197-21329216 | None:intergenic | 50.0% | |
CGCAGGACAACTCTACAGAA+TGG | - | chr1_2:21329419-21329438 | None:intergenic | 50.0% | |
AGATCTCTGATGGGAGACAG+TGG | + | chr1_2:21329622-21329641 | Msa0062160:CDS | 50.0% | |
TGAGCTGCTTAGAACCAGAG+AGG | + | chr1_2:21329746-21329765 | Msa0062160:CDS | 50.0% | |
CGTGTAAAAGAGGACGAGTC+AGG | + | chr1_2:21329792-21329811 | Msa0062160:CDS | 50.0% | |
!!! | GCATGGCTCACATTTTGGCT+TGG | - | chr1_2:21329840-21329859 | None:intergenic | 50.0% |
!! | GCTCGTTGGTAGTGCACCAT+TGG | + | chr1_2:21328011-21328030 | Msa0062160:intron | 55.0% |
GCACCATTGGGCCCATACTT+AGG | + | chr1_2:21328024-21328043 | Msa0062160:intron | 55.0% | |
CGACCTAAGTATGGGCCCAA+TGG | - | chr1_2:21328030-21328049 | None:intergenic | 55.0% | |
GCAACCCTCACTGTTCCTGA+TGG | + | chr1_2:21328369-21328388 | Msa0062160:CDS | 55.0% | |
CAGTGCCATCAGGAACAGTG+AGG | - | chr1_2:21328377-21328396 | None:intergenic | 55.0% | |
CTGTTCCTGATGGCACTGTC+TGG | + | chr1_2:21328379-21328398 | Msa0062160:CDS | 55.0% | |
GCCATGAGAAGCCGTACTGA+AGG | + | chr1_2:21328576-21328595 | Msa0062160:CDS | 55.0% | |
CCCTTCAGTACGGCTTCTCA+TGG | - | chr1_2:21328580-21328599 | None:intergenic | 55.0% | |
TGTCAGTGTAGCGGCAGAGT+AGG | - | chr1_2:21329104-21329123 | None:intergenic | 55.0% | |
GGCCGAGCAAAGTTAAGCCA+AGG | + | chr1_2:21329669-21329688 | Msa0062160:CDS | 55.0% | |
AACCAGAGAGGTAGTGCTGC+AGG | + | chr1_2:21329758-21329777 | Msa0062160:CDS | 55.0% | |
AACCTGCAGCACTACCTCTC+TGG | - | chr1_2:21329763-21329782 | None:intergenic | 55.0% | |
!! | TGACACGGTGCTGCAAGTGA+GGG | - | chr1_2:21329875-21329894 | None:intergenic | 55.0% |
AGACGCCAGACAGTGCCATC+AGG | - | chr1_2:21328387-21328406 | None:intergenic | 60.0% | |
GATGGCACTGTCTGGCGTCT+AGG | + | chr1_2:21328387-21328406 | Msa0062160:CDS | 60.0% | |
TGCCGCTACACTGACACGTG+TGG | + | chr1_2:21329108-21329127 | Msa0062160:intron | 60.0% | |
!! | CTGACACGGTGCTGCAAGTG+AGG | - | chr1_2:21329876-21329895 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 21326289 | 21329920 | 21326289 | ID=Msa0062160;Name=Msa0062160 |
chr1_2 | mRNA | 21326289 | 21329920 | 21326289 | ID=Msa0062160-mRNA-1;Parent=Msa0062160;Name=Msa0062160-mRNA-1;_AED=0.37;_eAED=0.37;_QI=236|0.66|0.5|1|1|1|4|0|436 |
chr1_2 | exon | 21326289 | 21326587 | 21326289 | ID=Msa0062160-mRNA-1:exon:7936;Parent=Msa0062160-mRNA-1 |
chr1_2 | exon | 21328318 | 21328999 | 21328318 | ID=Msa0062160-mRNA-1:exon:7937;Parent=Msa0062160-mRNA-1 |
chr1_2 | exon | 21329273 | 21329427 | 21329273 | ID=Msa0062160-mRNA-1:exon:7938;Parent=Msa0062160-mRNA-1 |
chr1_2 | exon | 21329510 | 21329920 | 21329510 | ID=Msa0062160-mRNA-1:exon:7939;Parent=Msa0062160-mRNA-1 |
chr1_2 | five_prime_UTR | 21326289 | 21326524 | 21326289 | ID=Msa0062160-mRNA-1:five_prime_utr;Parent=Msa0062160-mRNA-1 |
chr1_2 | CDS | 21326525 | 21326587 | 21326525 | ID=Msa0062160-mRNA-1:cds;Parent=Msa0062160-mRNA-1 |
chr1_2 | CDS | 21328318 | 21328999 | 21328318 | ID=Msa0062160-mRNA-1:cds;Parent=Msa0062160-mRNA-1 |
chr1_2 | CDS | 21329273 | 21329427 | 21329273 | ID=Msa0062160-mRNA-1:cds;Parent=Msa0062160-mRNA-1 |
chr1_2 | CDS | 21329510 | 21329920 | 21329510 | ID=Msa0062160-mRNA-1:cds;Parent=Msa0062160-mRNA-1 |
Gene Sequence |
Protein sequence |