AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1129860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1129860 MtrunA17_Chr4g0020331 86.616 396 51 1 20 415 22 415 0.0 695
Msa1129860 MtrunA17_Chr3g0103741 85.783 415 53 3 4 415 12 423 0.0 687
Msa1129860 MtrunA17_Chr4g0063911 47.208 394 196 3 24 415 15 398 7.33e-115 341
Msa1129860 MtrunA17_Chr4g0022871 32.512 406 247 8 28 415 14 410 8.46e-58 194
Msa1129860 MtrunA17_Chr2g0280971 33.010 412 245 10 24 415 39 439 3.07e-57 194
Msa1129860 MtrunA17_Chr4g0022861 33.166 398 237 10 37 415 7 394 2.45e-55 187
Msa1129860 MtrunA17_Chr2g0280991 32.203 413 237 11 30 415 23 419 2.26e-52 181
Msa1129860 MtrunA17_Chr2g0323381 33.252 409 240 9 28 415 14 410 3.03e-51 177
Msa1129860 MtrunA17_Chr4g0022801 32.558 344 172 11 121 415 69 401 8.17e-37 138
Msa1129860 MtrunA17_Chr8g0335821 29.714 350 213 9 92 415 20 362 1.87e-29 117
Msa1129860 MtrunA17_Chr1g0184961 31.855 248 138 7 73 296 112 352 2.23e-26 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1129860 AT1G70330.1 65.865 416 139 2 2 415 36 450 0.0 537
Msa1129860 AT1G02630.1 47.704 392 189 5 24 415 14 389 7.74e-122 359
Msa1129860 AT1G02630.2 40.816 392 172 6 24 415 14 345 1.67e-91 280
Msa1129860 AT4G05120.1 32.203 413 238 11 28 415 17 412 1.21e-50 176
Msa1129860 AT4G05120.2 32.203 413 238 11 28 415 17 412 1.21e-50 176
Msa1129860 AT4G05110.3 31.068 412 240 12 30 415 19 412 2.78e-48 170
Msa1129860 AT4G05110.1 31.068 412 240 12 30 415 19 412 2.78e-48 170
Msa1129860 AT4G05110.2 31.068 412 240 12 30 415 19 412 8.27e-48 169
Msa1129860 AT4G05130.1 30.175 401 244 11 37 415 26 412 2.53e-47 167
Msa1129860 AT1G61630.1 29.684 411 253 9 28 415 15 412 5.52e-46 164
Msa1129860 AT4G05140.1 29.238 407 259 10 28 415 17 413 1.74e-43 157
Msa1129860 AT3G09990.1 29.383 405 244 9 37 415 25 413 3.41e-43 156

Find 114 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGGGGCTGTTGGGATTTC+AGG 0.094893 7_3:+81880778 Msa1129860:CDS
GCTCTATTATAGCTTGGTTT+TGG 0.174004 7_3:+81881838 Msa1129860:CDS
ACACTATTAACGTGTCTCTT+AGG 0.195857 7_3:+81881693 Msa1129860:CDS
TACACGCAGGCGGTCATTGC+TGG 0.225351 7_3:+81880862 Msa1129860:CDS
AGTGTGTTCTTCTTAGTTAT+TGG 0.230173 7_3:+81881804 Msa1129860:CDS
TTCATTATAGTACTTTATAA+TGG 0.242520 7_3:-81881292 None:intergenic
TTGGTGCAGGGATCTATTCT+TGG 0.258857 7_3:+81880814 Msa1129860:CDS
TGGCTCCGCTGGTGAGTTGC+CGG 0.294888 7_3:+81880834 Msa1129860:CDS
GCCACAATATATGCAGGTTT+TGG 0.298213 7_3:-81881898 None:intergenic
ACTCAACTAGAAGTCAAAAC+TGG 0.324989 7_3:+81881924 Msa1129860:three_prime_UTR
TTCTTCTACCTTCATGTTCA+AGG 0.339199 7_3:+81880407 Msa1129860:CDS
ACACATTAAAGCAAGTAATA+AGG 0.345288 7_3:-81881521 None:intergenic
ATCTCTGTCCGGAAGAATTT+CGG 0.346613 7_3:-81881663 None:intergenic
TTAGTTATTGGTCTGGCTGC+TGG 0.347855 7_3:+81881816 Msa1129860:CDS
AAGCAAGTAATAAGGAGAAT+TGG 0.349646 7_3:-81881513 None:intergenic
ACGTCACTGCTGGGGCTGTT+GGG 0.361788 7_3:+81880770 Msa1129860:CDS
TACGTCACTGCTGGGGCTGT+TGG 0.363518 7_3:+81880769 Msa1129860:CDS
CTTGATGTCGTGTATGTTAA+GGG 0.366056 7_3:+81880721 Msa1129860:CDS
TTTAATGTGTTTGACCTTGT+TGG 0.367568 7_3:+81881534 Msa1129860:CDS
CTCTGCATGCTGCAACTTCA+CGG 0.371199 7_3:-81881766 None:intergenic
CTATAATGAACTTAAGATTC+AGG 0.375812 7_3:+81881305 Msa1129860:CDS
TTCAGGTGTGGCTAATGCTT+TGG 0.388115 7_3:+81880795 Msa1129860:CDS
ATACGGTCAACGCTTGCATC+GGG 0.388734 7_3:-81880556 None:intergenic
TCATTATAGTACTTTATAAT+GGG 0.388994 7_3:-81881291 None:intergenic
ACTCTCAGCTTCTTAAAGAT+TGG 0.396591 7_3:+81881487 Msa1129860:CDS
ACACGCAGGCGGTCATTGCT+GGG 0.398252 7_3:+81880863 Msa1129860:CDS
TGCACGGTCCGAAATTCTTC+CGG 0.401715 7_3:+81881655 Msa1129860:CDS
CTGCTGGCTCTATTATAGCT+TGG 0.403267 7_3:+81881832 Msa1129860:CDS
GTCGAGTCGGGTTGTATAAC+GGG 0.404515 7_3:+81880743 Msa1129860:CDS
GTGACGCTTGCAATATTTCC+TGG 0.410311 7_3:+81881444 Msa1129860:CDS
ATAGATATATACAGATTTCC+TGG 0.410882 7_3:-81881870 None:intergenic
GGGTGCTTGTTTCTTTCCTA+AGG 0.415931 7_3:+81881142 Msa1129860:CDS
GGTTTCGTTAATTTGTTTCC+CGG 0.422959 7_3:+81881951 Msa1129860:three_prime_UTR
CACTATTAACGTGTCTCTTA+GGG 0.428475 7_3:+81881694 Msa1129860:CDS
GTTCTTCTTAGTTATTGGTC+TGG 0.429994 7_3:+81881809 Msa1129860:CDS
CTGTCTGGAGATCAACTGTA+TGG 0.434174 7_3:+81881367 Msa1129860:CDS
GGTCGAGTCGGGTTGTATAA+CGG 0.441509 7_3:+81880742 Msa1129860:CDS
CTAGAAGTCAAAACTGGGAT+TGG 0.447143 7_3:+81881930 Msa1129860:three_prime_UTR
GCTTGATGTCGTGTATGTTA+AGG 0.447841 7_3:+81880720 Msa1129860:CDS
TTACAAAGTTTACACGTGTC+CGG 0.450454 7_3:-81881970 None:intergenic
GTCCTTTGACAGTATCTGTC+TGG 0.460668 7_3:+81881352 Msa1129860:CDS
GCATCGGCTATTTGTTCCCA+TGG 0.462726 7_3:+81880491 Msa1129860:CDS
CAACGCTTGCATCGGGGTAA+AGG 0.467006 7_3:-81880549 None:intergenic
ATACCACTTGATTGTTCCTA+AGG 0.474334 7_3:-81881394 None:intergenic
GGATCTATTCTTGGCTCCGC+TGG 0.479504 7_3:+81880823 Msa1129860:CDS
TGTGGCTAATGCTTTGGTGC+AGG 0.485275 7_3:+81880801 Msa1129860:CDS
CACGCAGGCGGTCATTGCTG+GGG 0.489338 7_3:+81880864 Msa1129860:CDS
AGAAAGTAGCAGAAGACAAA+TGG 0.493821 7_3:+81880437 Msa1129860:CDS
TTAGGAACAATCAAGTGGTA+TGG 0.496112 7_3:+81881396 Msa1129860:CDS
TACAAAGTTTACACGTGTCC+GGG 0.498269 7_3:-81881969 None:intergenic
TACTGTTAAAATGTATAAGA+AGG 0.499126 7_3:+81881996 Msa1129860:three_prime_UTR
ACCATTGTCGTCTTCAACGG+CGG 0.502286 7_3:-81881331 None:intergenic
GTTTACACGCAAGATGCCTC+TGG 0.510856 7_3:+81881180 Msa1129860:CDS
TTGCAGCATGCAGAGACTGC+GGG 0.517119 7_3:+81881774 Msa1129860:CDS
TGTCTCTTAGGGCTTACAAA+TGG 0.520478 7_3:+81881705 Msa1129860:CDS
TGCAAGCATCCTAAGAAGAG+AGG 0.520652 7_3:-81881636 None:intergenic
AATGAGATTTGTGTCGGTTG+AGG 0.521136 7_3:-81880636 None:intergenic
CTCTTCTTAGGATGCTTGCA+CGG 0.521892 7_3:+81881639 Msa1129860:CDS
TGTATGTTAAGGGTCGAGTC+GGG 0.521957 7_3:+81880731 Msa1129860:CDS
ACAATCAAGTGGTATGGGCT+CGG 0.529311 7_3:+81881402 Msa1129860:CDS
AGTGAAGCCACAATATATGC+AGG 0.530023 7_3:-81881904 None:intergenic
ACCGCCTGCGTGTACCTCTC+CGG 0.532675 7_3:-81880853 None:intergenic
GGCTGTTGGGATTTCAGGTG+TGG 0.535654 7_3:+81880783 Msa1129860:CDS
AAATCATCAATACACTGGTA+AGG 0.536010 7_3:-81881731 None:intergenic
TCAACTGTATGGGATACCTT+AGG 0.538806 7_3:+81881378 Msa1129860:CDS
TGTGATTATGTTCATATGCA+TGG 0.539930 7_3:+81881242 Msa1129860:CDS
GATACGGTCAACGCTTGCAT+CGG 0.540085 7_3:-81880557 None:intergenic
GTGTATGTTAAGGGTCGAGT+CGG 0.540507 7_3:+81880730 Msa1129860:CDS
ATCTACTTCACACTTGGCAT+CGG 0.551559 7_3:+81880475 Msa1129860:CDS
TTTGTCGTCCTTGAACATGA+AGG 0.552481 7_3:-81880415 None:intergenic
TAGGAACAATCAAGTGGTAT+GGG 0.556979 7_3:+81881397 Msa1129860:CDS
CTCAACTAGAAGTCAAAACT+GGG 0.561058 7_3:+81881925 Msa1129860:three_prime_UTR
GTGGCTAATGCTTTGGTGCA+GGG 0.564289 7_3:+81880802 Msa1129860:CDS
AGACACGTTAATAGTGTCAC+AGG 0.565534 7_3:-81881687 None:intergenic
AGGACCATTGTCGTCTTCAA+CGG 0.572794 7_3:-81881334 None:intergenic
AACATACACGACATCAAGCA+AGG 0.573774 7_3:-81880716 None:intergenic
GTGTCACAGGAATCTCTGTC+CGG 0.575678 7_3:-81881674 None:intergenic
TCCAAAACCTGCATATATTG+TGG 0.590287 7_3:+81881897 Msa1129860:three_prime_UTR
AGCTAAAATCATCAATACAC+TGG 0.598738 7_3:-81881736 None:intergenic
TGCAAAGTAGAGCAAAGATA+CGG 0.603721 7_3:-81880573 None:intergenic
ACATCTTCTGTAATGTAACC+AGG 0.604109 7_3:-81881462 None:intergenic
ACGCAGGCGGTCATTGCTGG+GGG 0.609305 7_3:+81880865 Msa1129860:CDS
TATATAATCTACTTCACACT+TGG 0.609971 7_3:+81880469 Msa1129860:CDS
GTTGCAGCATGCAGAGACTG+CGG 0.611240 7_3:+81881773 Msa1129860:CDS
AGGTAGAAGAAGAACAATGG+TGG 0.611992 7_3:-81880395 None:intergenic
CTGTGATGAATGCGTTCCAT+GGG 0.612636 7_3:-81880507 None:intergenic
TGTCTGGAGATCAACTGTAT+GGG 0.613864 7_3:+81881368 Msa1129860:CDS
GCAAGCATCCTAAGAAGAGA+GGG 0.616215 7_3:-81881635 None:intergenic
GCTGTGATGAATGCGTTCCA+TGG 0.616389 7_3:-81880508 None:intergenic
CGTGGGAATGAGATTTGTGT+CGG 0.618153 7_3:-81880642 None:intergenic
CCGCTGGTGAGTTGCCGGAG+AGG 0.619123 7_3:+81880839 Msa1129860:CDS
AATCTTTAAGAAGCTGAGAG+TGG 0.626615 7_3:-81881485 None:intergenic
CTCCAGACAGATACTGTCAA+AGG 0.635770 7_3:-81881354 None:intergenic
AAGCAAGGGAACTATGAGGA+GGG 0.636359 7_3:-81880701 None:intergenic
ATCCAACGTTGATCCTCACG+TGG 0.642546 7_3:-81880660 None:intergenic
CCTCTCCGGCAACTCACCAG+CGG 0.643402 7_3:-81880839 None:intergenic
AAGGTAAGAGAAGTAATCAA+CGG 0.645014 7_3:-81880530 None:intergenic
CAAGCAAGGGAACTATGAGG+AGG 0.646036 7_3:-81880702 None:intergenic
CATCAAGCAAGGGAACTATG+AGG 0.650180 7_3:-81880705 None:intergenic
GCCGGAGAGGTACACGCAGG+CGG 0.656282 7_3:+81880852 Msa1129860:CDS
ACATACACGACATCAAGCAA+GGG 0.657824 7_3:-81880715 None:intergenic
TCCCACGTGAGGATCAACGT+TGG 0.661083 7_3:+81880658 Msa1129860:CDS
TGAAGGTAGAAGAAGAACAA+TGG 0.668431 7_3:-81880398 None:intergenic
ACAAATCTCATTCCCACGTG+AGG 0.669174 7_3:+81880647 Msa1129860:CDS
TGCAGCATGCAGAGACTGCG+GGG 0.670996 7_3:+81881775 Msa1129860:CDS
TACGGTCAACGCTTGCATCG+GGG 0.672941 7_3:-81880555 None:intergenic
CAATGATAAAGGGACCAACA+TGG 0.675323 7_3:-81882065 None:intergenic
ATACCTTAGGAACAATCAAG+TGG 0.685947 7_3:+81881391 Msa1129860:CDS
GGTTGAGGATGATGATGATG+AGG 0.690333 7_3:-81880621 None:intergenic
GCCGCCGTTGAAGACGACAA+TGG 0.692231 7_3:+81881330 Msa1129860:CDS
TAATGAACTTAAGATTCAGG+CGG 0.703355 7_3:+81881308 Msa1129860:CDS
TCCAACGTTGATCCTCACGT+GGG 0.722026 7_3:-81880659 None:intergenic
GTTGCCGGAGAGGTACACGC+AGG 0.746866 7_3:+81880849 Msa1129860:CDS
CTAGAAGGTATACTGCAGTG+AGG 0.762315 7_3:-81881563 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAAAAAAAAAGAAGA+AGG - chr7_3:81880913-81880932 None:intergenic 15.0%
!! TCATTATAGTACTTTATAAT+GGG - chr7_3:81881294-81881313 None:intergenic 15.0%
!! TTCATTATAGTACTTTATAA+TGG - chr7_3:81881295-81881314 None:intergenic 15.0%
!! AAAGAAAAAAAAAAAGAAGA+AGG - chr7_3:81880913-81880932 None:intergenic 15.0%
!! TCATTATAGTACTTTATAAT+GGG - chr7_3:81881294-81881313 None:intergenic 15.0%
!! TTCATTATAGTACTTTATAA+TGG - chr7_3:81881295-81881314 None:intergenic 15.0%
!! ATAAAACATGATATGAGAAT+GGG - chr7_3:81880980-81880999 None:intergenic 20.0%
!! AATAAAACATGATATGAGAA+TGG - chr7_3:81880981-81881000 None:intergenic 20.0%
!! TACTGTTAAAATGTATAAGA+AGG + chr7_3:81881996-81882015 Msa1129860:three_prime_UTR 20.0%
!! ATAAAACATGATATGAGAAT+GGG - chr7_3:81880980-81880999 None:intergenic 20.0%
!! AATAAAACATGATATGAGAA+TGG - chr7_3:81880981-81881000 None:intergenic 20.0%
!! TACTGTTAAAATGTATAAGA+AGG + chr7_3:81881996-81882015 Msa1129860:three_prime_UTR 20.0%
! TATATAATCTACTTCACACT+TGG + chr7_3:81880469-81880488 Msa1129860:CDS 25.0%
!!! TTTTTTTCTTTCCCTACTTT+TGG + chr7_3:81880922-81880941 Msa1129860:intron 25.0%
! TGAATGGAAAATAATGTGTA+AGG + chr7_3:81881052-81881071 Msa1129860:intron 25.0%
!! GTAAATGGTTTTTCATTTCA+GGG + chr7_3:81881121-81881140 Msa1129860:intron 25.0%
!! TAAATGGTTTTTCATTTCAG+GGG + chr7_3:81881122-81881141 Msa1129860:intron 25.0%
! CTATAATGAACTTAAGATTC+AGG + chr7_3:81881305-81881324 Msa1129860:CDS 25.0%
! ACACATTAAAGCAAGTAATA+AGG - chr7_3:81881524-81881543 None:intergenic 25.0%
! ATAGATATATACAGATTTCC+TGG - chr7_3:81881873-81881892 None:intergenic 25.0%
! TATATAATCTACTTCACACT+TGG + chr7_3:81880469-81880488 Msa1129860:CDS 25.0%
!!! TTTTTTTCTTTCCCTACTTT+TGG + chr7_3:81880922-81880941 Msa1129860:intron 25.0%
! TGAATGGAAAATAATGTGTA+AGG + chr7_3:81881052-81881071 Msa1129860:intron 25.0%
!! GTAAATGGTTTTTCATTTCA+GGG + chr7_3:81881121-81881140 Msa1129860:intron 25.0%
!! TAAATGGTTTTTCATTTCAG+GGG + chr7_3:81881122-81881141 Msa1129860:intron 25.0%
! CTATAATGAACTTAAGATTC+AGG + chr7_3:81881305-81881324 Msa1129860:CDS 25.0%
! ACACATTAAAGCAAGTAATA+AGG - chr7_3:81881524-81881543 None:intergenic 25.0%
! ATAGATATATACAGATTTCC+TGG - chr7_3:81881873-81881892 None:intergenic 25.0%
AAGGTAAGAGAAGTAATCAA+CGG - chr7_3:81880533-81880552 None:intergenic 30.0%
!!! GCAAATAGTTTTTTGTATGC+TGG + chr7_3:81881020-81881039 Msa1129860:intron 30.0%
!!! AGTTTTTTGTATGCTGGATT+TGG + chr7_3:81881026-81881045 Msa1129860:intron 30.0%
!!! GTTTTTTGTATGCTGGATTT+GGG + chr7_3:81881027-81881046 Msa1129860:intron 30.0%
! ATTGCTTGTTTCTTGAACTT+TGG + chr7_3:81881094-81881113 Msa1129860:intron 30.0%
! TTGTTTCTTGAACTTTGGAA+AGG + chr7_3:81881099-81881118 Msa1129860:intron 30.0%
! TTGAACTTTGGAAAGGTAAA+TGG + chr7_3:81881106-81881125 Msa1129860:intron 30.0%
! GGTAAATGGTTTTTCATTTC+AGG + chr7_3:81881120-81881139 Msa1129860:intron 30.0%
! CAGCTTTTGTAAATATCCTT+AGG - chr7_3:81881161-81881180 None:intergenic 30.0%
TGTGATTATGTTCATATGCA+TGG + chr7_3:81881242-81881261 Msa1129860:CDS 30.0%
TAATGAACTTAAGATTCAGG+CGG + chr7_3:81881308-81881327 Msa1129860:CDS 30.0%
AAGCAAGTAATAAGGAGAAT+TGG - chr7_3:81881516-81881535 None:intergenic 30.0%
TTTAATGTGTTTGACCTTGT+TGG + chr7_3:81881534-81881553 Msa1129860:CDS 30.0%
! CAATTTTTGCATTCTCTAGA+AGG - chr7_3:81881581-81881600 None:intergenic 30.0%
GAGAATGCAAAAATTGCAAT+CGG + chr7_3:81881585-81881604 Msa1129860:CDS 30.0%
AAATCATCAATACACTGGTA+AGG - chr7_3:81881734-81881753 None:intergenic 30.0%
AGCTAAAATCATCAATACAC+TGG - chr7_3:81881739-81881758 None:intergenic 30.0%
AGTGTGTTCTTCTTAGTTAT+TGG + chr7_3:81881804-81881823 Msa1129860:CDS 30.0%
!! CTCTATTATAGCTTGGTTTT+GGG + chr7_3:81881839-81881858 Msa1129860:CDS 30.0%
AAGGTAAGAGAAGTAATCAA+CGG - chr7_3:81880533-81880552 None:intergenic 30.0%
!!! GCAAATAGTTTTTTGTATGC+TGG + chr7_3:81881020-81881039 Msa1129860:intron 30.0%
!!! AGTTTTTTGTATGCTGGATT+TGG + chr7_3:81881026-81881045 Msa1129860:intron 30.0%
!!! GTTTTTTGTATGCTGGATTT+GGG + chr7_3:81881027-81881046 Msa1129860:intron 30.0%
! ATTGCTTGTTTCTTGAACTT+TGG + chr7_3:81881094-81881113 Msa1129860:intron 30.0%
! TTGTTTCTTGAACTTTGGAA+AGG + chr7_3:81881099-81881118 Msa1129860:intron 30.0%
! TTGAACTTTGGAAAGGTAAA+TGG + chr7_3:81881106-81881125 Msa1129860:intron 30.0%
! GGTAAATGGTTTTTCATTTC+AGG + chr7_3:81881120-81881139 Msa1129860:intron 30.0%
! CAGCTTTTGTAAATATCCTT+AGG - chr7_3:81881161-81881180 None:intergenic 30.0%
TGTGATTATGTTCATATGCA+TGG + chr7_3:81881242-81881261 Msa1129860:CDS 30.0%
TAATGAACTTAAGATTCAGG+CGG + chr7_3:81881308-81881327 Msa1129860:CDS 30.0%
AAGCAAGTAATAAGGAGAAT+TGG - chr7_3:81881516-81881535 None:intergenic 30.0%
TTTAATGTGTTTGACCTTGT+TGG + chr7_3:81881534-81881553 Msa1129860:CDS 30.0%
! CAATTTTTGCATTCTCTAGA+AGG - chr7_3:81881581-81881600 None:intergenic 30.0%
GAGAATGCAAAAATTGCAAT+CGG + chr7_3:81881585-81881604 Msa1129860:CDS 30.0%
AAATCATCAATACACTGGTA+AGG - chr7_3:81881734-81881753 None:intergenic 30.0%
AGCTAAAATCATCAATACAC+TGG - chr7_3:81881739-81881758 None:intergenic 30.0%
AGTGTGTTCTTCTTAGTTAT+TGG + chr7_3:81881804-81881823 Msa1129860:CDS 30.0%
!! CTCTATTATAGCTTGGTTTT+GGG + chr7_3:81881839-81881858 Msa1129860:CDS 30.0%
TGAAGGTAGAAGAAGAACAA+TGG - chr7_3:81880401-81880420 None:intergenic 35.0%
TTCTTCTACCTTCATGTTCA+AGG + chr7_3:81880407-81880426 Msa1129860:CDS 35.0%
AGAAAGTAGCAGAAGACAAA+TGG + chr7_3:81880437-81880456 Msa1129860:CDS 35.0%
TGCAAAGTAGAGCAAAGATA+CGG - chr7_3:81880576-81880595 None:intergenic 35.0%
CTTGATGTCGTGTATGTTAA+GGG + chr7_3:81880721-81880740 Msa1129860:CDS 35.0%
CACAACTTCAACCAAAAGTA+GGG - chr7_3:81880936-81880955 None:intergenic 35.0%
ACACAACTTCAACCAAAAGT+AGG - chr7_3:81880937-81880956 None:intergenic 35.0%
ATACCTTAGGAACAATCAAG+TGG + chr7_3:81881391-81881410 Msa1129860:CDS 35.0%
ATACCACTTGATTGTTCCTA+AGG - chr7_3:81881397-81881416 None:intergenic 35.0%
TTAGGAACAATCAAGTGGTA+TGG + chr7_3:81881396-81881415 Msa1129860:CDS 35.0%
TAGGAACAATCAAGTGGTAT+GGG + chr7_3:81881397-81881416 Msa1129860:CDS 35.0%
ACATCTTCTGTAATGTAACC+AGG - chr7_3:81881465-81881484 None:intergenic 35.0%
! AATCTTTAAGAAGCTGAGAG+TGG - chr7_3:81881488-81881507 None:intergenic 35.0%
ACTCTCAGCTTCTTAAAGAT+TGG + chr7_3:81881487-81881506 Msa1129860:CDS 35.0%
!! TTGTTTTTCCCTCTCTTCTT+AGG + chr7_3:81881627-81881646 Msa1129860:CDS 35.0%
ACACTATTAACGTGTCTCTT+AGG + chr7_3:81881693-81881712 Msa1129860:CDS 35.0%
CACTATTAACGTGTCTCTTA+GGG + chr7_3:81881694-81881713 Msa1129860:CDS 35.0%
GTTCTTCTTAGTTATTGGTC+TGG + chr7_3:81881809-81881828 Msa1129860:CDS 35.0%
! GCTCTATTATAGCTTGGTTT+TGG + chr7_3:81881838-81881857 Msa1129860:CDS 35.0%
TCCAAAACCTGCATATATTG+TGG + chr7_3:81881897-81881916 Msa1129860:three_prime_UTR 35.0%
ACTCAACTAGAAGTCAAAAC+TGG + chr7_3:81881924-81881943 Msa1129860:three_prime_UTR 35.0%
CTCAACTAGAAGTCAAAACT+GGG + chr7_3:81881925-81881944 Msa1129860:three_prime_UTR 35.0%
!! GGTTTCGTTAATTTGTTTCC+CGG + chr7_3:81881951-81881970 Msa1129860:three_prime_UTR 35.0%
TTACAAAGTTTACACGTGTC+CGG - chr7_3:81881973-81881992 None:intergenic 35.0%
TGAAGGTAGAAGAAGAACAA+TGG - chr7_3:81880401-81880420 None:intergenic 35.0%
TTCTTCTACCTTCATGTTCA+AGG + chr7_3:81880407-81880426 Msa1129860:CDS 35.0%
AGAAAGTAGCAGAAGACAAA+TGG + chr7_3:81880437-81880456 Msa1129860:CDS 35.0%
TGCAAAGTAGAGCAAAGATA+CGG - chr7_3:81880576-81880595 None:intergenic 35.0%
CTTGATGTCGTGTATGTTAA+GGG + chr7_3:81880721-81880740 Msa1129860:CDS 35.0%
CACAACTTCAACCAAAAGTA+GGG - chr7_3:81880936-81880955 None:intergenic 35.0%
ACACAACTTCAACCAAAAGT+AGG - chr7_3:81880937-81880956 None:intergenic 35.0%
ATACCTTAGGAACAATCAAG+TGG + chr7_3:81881391-81881410 Msa1129860:CDS 35.0%
ATACCACTTGATTGTTCCTA+AGG - chr7_3:81881397-81881416 None:intergenic 35.0%
TTAGGAACAATCAAGTGGTA+TGG + chr7_3:81881396-81881415 Msa1129860:CDS 35.0%
TAGGAACAATCAAGTGGTAT+GGG + chr7_3:81881397-81881416 Msa1129860:CDS 35.0%
ACATCTTCTGTAATGTAACC+AGG - chr7_3:81881465-81881484 None:intergenic 35.0%
! AATCTTTAAGAAGCTGAGAG+TGG - chr7_3:81881488-81881507 None:intergenic 35.0%
ACTCTCAGCTTCTTAAAGAT+TGG + chr7_3:81881487-81881506 Msa1129860:CDS 35.0%
!! TTGTTTTTCCCTCTCTTCTT+AGG + chr7_3:81881627-81881646 Msa1129860:CDS 35.0%
ACACTATTAACGTGTCTCTT+AGG + chr7_3:81881693-81881712 Msa1129860:CDS 35.0%
CACTATTAACGTGTCTCTTA+GGG + chr7_3:81881694-81881713 Msa1129860:CDS 35.0%
GTTCTTCTTAGTTATTGGTC+TGG + chr7_3:81881809-81881828 Msa1129860:CDS 35.0%
! GCTCTATTATAGCTTGGTTT+TGG + chr7_3:81881838-81881857 Msa1129860:CDS 35.0%
TCCAAAACCTGCATATATTG+TGG + chr7_3:81881897-81881916 Msa1129860:three_prime_UTR 35.0%
ACTCAACTAGAAGTCAAAAC+TGG + chr7_3:81881924-81881943 Msa1129860:three_prime_UTR 35.0%
CTCAACTAGAAGTCAAAACT+GGG + chr7_3:81881925-81881944 Msa1129860:three_prime_UTR 35.0%
!! GGTTTCGTTAATTTGTTTCC+CGG + chr7_3:81881951-81881970 Msa1129860:three_prime_UTR 35.0%
TTACAAAGTTTACACGTGTC+CGG - chr7_3:81881973-81881992 None:intergenic 35.0%
AGGTAGAAGAAGAACAATGG+TGG - chr7_3:81880398-81880417 None:intergenic 40.0%
TTTGTCGTCCTTGAACATGA+AGG - chr7_3:81880418-81880437 None:intergenic 40.0%
ATCTACTTCACACTTGGCAT+CGG + chr7_3:81880475-81880494 Msa1129860:CDS 40.0%
!! AATGAGATTTGTGTCGGTTG+AGG - chr7_3:81880639-81880658 None:intergenic 40.0%
ACATACACGACATCAAGCAA+GGG - chr7_3:81880718-81880737 None:intergenic 40.0%
AACATACACGACATCAAGCA+AGG - chr7_3:81880719-81880738 None:intergenic 40.0%
GCTTGATGTCGTGTATGTTA+AGG + chr7_3:81880720-81880739 Msa1129860:CDS 40.0%
! ATGCTGGATTTGGGTTTGAA+TGG + chr7_3:81881036-81881055 Msa1129860:intron 40.0%
! AGAGATTAGCACTCTTTTGC+AGG - chr7_3:81881206-81881225 None:intergenic 40.0%
TGTCTGGAGATCAACTGTAT+GGG + chr7_3:81881368-81881387 Msa1129860:CDS 40.0%
TCAACTGTATGGGATACCTT+AGG + chr7_3:81881378-81881397 Msa1129860:CDS 40.0%
ATCTCTGTCCGGAAGAATTT+CGG - chr7_3:81881666-81881685 None:intergenic 40.0%
AGACACGTTAATAGTGTCAC+AGG - chr7_3:81881690-81881709 None:intergenic 40.0%
TGTCTCTTAGGGCTTACAAA+TGG + chr7_3:81881705-81881724 Msa1129860:CDS 40.0%
! GCCACAATATATGCAGGTTT+TGG - chr7_3:81881901-81881920 None:intergenic 40.0%
AGTGAAGCCACAATATATGC+AGG - chr7_3:81881907-81881926 None:intergenic 40.0%
CTAGAAGTCAAAACTGGGAT+TGG + chr7_3:81881930-81881949 Msa1129860:three_prime_UTR 40.0%
TACAAAGTTTACACGTGTCC+GGG - chr7_3:81881972-81881991 None:intergenic 40.0%
! CACTTTTACAAGCACCATGT+TGG + chr7_3:81882051-81882070 Msa1129860:three_prime_UTR 40.0%
GTGGATTCTGTTTGTGACAT+GGG - chr7_3:81880379-81880398 None:intergenic 40.0%
AGGTAGAAGAAGAACAATGG+TGG - chr7_3:81880398-81880417 None:intergenic 40.0%
TTTGTCGTCCTTGAACATGA+AGG - chr7_3:81880418-81880437 None:intergenic 40.0%
ATCTACTTCACACTTGGCAT+CGG + chr7_3:81880475-81880494 Msa1129860:CDS 40.0%
!! AATGAGATTTGTGTCGGTTG+AGG - chr7_3:81880639-81880658 None:intergenic 40.0%
ACATACACGACATCAAGCAA+GGG - chr7_3:81880718-81880737 None:intergenic 40.0%
AACATACACGACATCAAGCA+AGG - chr7_3:81880719-81880738 None:intergenic 40.0%
GCTTGATGTCGTGTATGTTA+AGG + chr7_3:81880720-81880739 Msa1129860:CDS 40.0%
! ATGCTGGATTTGGGTTTGAA+TGG + chr7_3:81881036-81881055 Msa1129860:intron 40.0%
! AGAGATTAGCACTCTTTTGC+AGG - chr7_3:81881206-81881225 None:intergenic 40.0%
TGTCTGGAGATCAACTGTAT+GGG + chr7_3:81881368-81881387 Msa1129860:CDS 40.0%
TCAACTGTATGGGATACCTT+AGG + chr7_3:81881378-81881397 Msa1129860:CDS 40.0%
ATCTCTGTCCGGAAGAATTT+CGG - chr7_3:81881666-81881685 None:intergenic 40.0%
AGACACGTTAATAGTGTCAC+AGG - chr7_3:81881690-81881709 None:intergenic 40.0%
TGTCTCTTAGGGCTTACAAA+TGG + chr7_3:81881705-81881724 Msa1129860:CDS 40.0%
! GCCACAATATATGCAGGTTT+TGG - chr7_3:81881901-81881920 None:intergenic 40.0%
AGTGAAGCCACAATATATGC+AGG - chr7_3:81881907-81881926 None:intergenic 40.0%
CTAGAAGTCAAAACTGGGAT+TGG + chr7_3:81881930-81881949 Msa1129860:three_prime_UTR 40.0%
TACAAAGTTTACACGTGTCC+GGG - chr7_3:81881972-81881991 None:intergenic 40.0%
! CACTTTTACAAGCACCATGT+TGG + chr7_3:81882051-81882070 Msa1129860:three_prime_UTR 40.0%
CTGTGATGAATGCGTTCCAT+GGG - chr7_3:81880510-81880529 None:intergenic 45.0%
! GGTTGAGGATGATGATGATG+AGG - chr7_3:81880624-81880643 None:intergenic 45.0%
CGTGGGAATGAGATTTGTGT+CGG - chr7_3:81880645-81880664 None:intergenic 45.0%
ACAAATCTCATTCCCACGTG+AGG + chr7_3:81880647-81880666 Msa1129860:CDS 45.0%
AAGCAAGGGAACTATGAGGA+GGG - chr7_3:81880704-81880723 None:intergenic 45.0%
CATCAAGCAAGGGAACTATG+AGG - chr7_3:81880708-81880727 None:intergenic 45.0%
GTGTATGTTAAGGGTCGAGT+CGG + chr7_3:81880730-81880749 Msa1129860:CDS 45.0%
TGTATGTTAAGGGTCGAGTC+GGG + chr7_3:81880731-81880750 Msa1129860:CDS 45.0%
TTCAGGTGTGGCTAATGCTT+TGG + chr7_3:81880795-81880814 Msa1129860:CDS 45.0%
TTGGTGCAGGGATCTATTCT+TGG + chr7_3:81880814-81880833 Msa1129860:CDS 45.0%
! GGGTGCTTGTTTCTTTCCTA+AGG + chr7_3:81881142-81881161 Msa1129860:CDS 45.0%
AGGACCATTGTCGTCTTCAA+CGG - chr7_3:81881337-81881356 None:intergenic 45.0%
GTCCTTTGACAGTATCTGTC+TGG + chr7_3:81881352-81881371 Msa1129860:CDS 45.0%
CTCCAGACAGATACTGTCAA+AGG - chr7_3:81881357-81881376 None:intergenic 45.0%
CTGTCTGGAGATCAACTGTA+TGG + chr7_3:81881367-81881386 Msa1129860:CDS 45.0%
ACAATCAAGTGGTATGGGCT+CGG + chr7_3:81881402-81881421 Msa1129860:CDS 45.0%
GTGACGCTTGCAATATTTCC+TGG + chr7_3:81881444-81881463 Msa1129860:CDS 45.0%
! CTAGAAGGTATACTGCAGTG+AGG - chr7_3:81881566-81881585 None:intergenic 45.0%
GCAAGCATCCTAAGAAGAGA+GGG - chr7_3:81881638-81881657 None:intergenic 45.0%
TGCAAGCATCCTAAGAAGAG+AGG - chr7_3:81881639-81881658 None:intergenic 45.0%
CTCTTCTTAGGATGCTTGCA+CGG + chr7_3:81881639-81881658 Msa1129860:CDS 45.0%
! TGCTGCAACTTCACGGTTTT+AGG - chr7_3:81881762-81881781 None:intergenic 45.0%
! TTAGTTATTGGTCTGGCTGC+TGG + chr7_3:81881816-81881835 Msa1129860:CDS 45.0%
!! CTGCTGGCTCTATTATAGCT+TGG + chr7_3:81881832-81881851 Msa1129860:CDS 45.0%
! GGTGGATTCTGTTTGTGACA+TGG - chr7_3:81880380-81880399 None:intergenic 45.0%
CTGTGATGAATGCGTTCCAT+GGG - chr7_3:81880510-81880529 None:intergenic 45.0%
! GGTTGAGGATGATGATGATG+AGG - chr7_3:81880624-81880643 None:intergenic 45.0%
CGTGGGAATGAGATTTGTGT+CGG - chr7_3:81880645-81880664 None:intergenic 45.0%
ACAAATCTCATTCCCACGTG+AGG + chr7_3:81880647-81880666 Msa1129860:CDS 45.0%
AAGCAAGGGAACTATGAGGA+GGG - chr7_3:81880704-81880723 None:intergenic 45.0%
CATCAAGCAAGGGAACTATG+AGG - chr7_3:81880708-81880727 None:intergenic 45.0%
GTGTATGTTAAGGGTCGAGT+CGG + chr7_3:81880730-81880749 Msa1129860:CDS 45.0%
TGTATGTTAAGGGTCGAGTC+GGG + chr7_3:81880731-81880750 Msa1129860:CDS 45.0%
TTCAGGTGTGGCTAATGCTT+TGG + chr7_3:81880795-81880814 Msa1129860:CDS 45.0%
TTGGTGCAGGGATCTATTCT+TGG + chr7_3:81880814-81880833 Msa1129860:CDS 45.0%
! GGGTGCTTGTTTCTTTCCTA+AGG + chr7_3:81881142-81881161 Msa1129860:CDS 45.0%
AGGACCATTGTCGTCTTCAA+CGG - chr7_3:81881337-81881356 None:intergenic 45.0%
GTCCTTTGACAGTATCTGTC+TGG + chr7_3:81881352-81881371 Msa1129860:CDS 45.0%
CTCCAGACAGATACTGTCAA+AGG - chr7_3:81881357-81881376 None:intergenic 45.0%
CTGTCTGGAGATCAACTGTA+TGG + chr7_3:81881367-81881386 Msa1129860:CDS 45.0%
ACAATCAAGTGGTATGGGCT+CGG + chr7_3:81881402-81881421 Msa1129860:CDS 45.0%
GTGACGCTTGCAATATTTCC+TGG + chr7_3:81881444-81881463 Msa1129860:CDS 45.0%
! CTAGAAGGTATACTGCAGTG+AGG - chr7_3:81881566-81881585 None:intergenic 45.0%
GCAAGCATCCTAAGAAGAGA+GGG - chr7_3:81881638-81881657 None:intergenic 45.0%
TGCAAGCATCCTAAGAAGAG+AGG - chr7_3:81881639-81881658 None:intergenic 45.0%
CTCTTCTTAGGATGCTTGCA+CGG + chr7_3:81881639-81881658 Msa1129860:CDS 45.0%
! TGCTGCAACTTCACGGTTTT+AGG - chr7_3:81881762-81881781 None:intergenic 45.0%
! TTAGTTATTGGTCTGGCTGC+TGG + chr7_3:81881816-81881835 Msa1129860:CDS 45.0%
!! CTGCTGGCTCTATTATAGCT+TGG + chr7_3:81881832-81881851 Msa1129860:CDS 45.0%
!! GCATCGGCTATTTGTTCCCA+TGG + chr7_3:81880491-81880510 Msa1129860:CDS 50.0%
GCTGTGATGAATGCGTTCCA+TGG - chr7_3:81880511-81880530 None:intergenic 50.0%
ATACGGTCAACGCTTGCATC+GGG - chr7_3:81880559-81880578 None:intergenic 50.0%
GATACGGTCAACGCTTGCAT+CGG - chr7_3:81880560-81880579 None:intergenic 50.0%
TCCAACGTTGATCCTCACGT+GGG - chr7_3:81880662-81880681 None:intergenic 50.0%
ATCCAACGTTGATCCTCACG+TGG - chr7_3:81880663-81880682 None:intergenic 50.0%
CAAGCAAGGGAACTATGAGG+AGG - chr7_3:81880705-81880724 None:intergenic 50.0%
! GGTCGAGTCGGGTTGTATAA+CGG + chr7_3:81880742-81880761 Msa1129860:CDS 50.0%
! GTCGAGTCGGGTTGTATAAC+GGG + chr7_3:81880743-81880762 Msa1129860:CDS 50.0%
!! AACGGGTTTTACGTCACTGC+TGG + chr7_3:81880760-81880779 Msa1129860:CDS 50.0%
! ACGGGTTTTACGTCACTGCT+GGG + chr7_3:81880761-81880780 Msa1129860:CDS 50.0%
! TGTGGCTAATGCTTTGGTGC+AGG + chr7_3:81880801-81880820 Msa1129860:CDS 50.0%
! GTGGCTAATGCTTTGGTGCA+GGG + chr7_3:81880802-81880821 Msa1129860:CDS 50.0%
GTTTACACGCAAGATGCCTC+TGG + chr7_3:81881180-81881199 Msa1129860:CDS 50.0%
ACCATTGTCGTCTTCAACGG+CGG - chr7_3:81881334-81881353 None:intergenic 50.0%
! CAGTGAGGCTTTTGCCAACA+AGG - chr7_3:81881551-81881570 None:intergenic 50.0%
TGCACGGTCCGAAATTCTTC+CGG + chr7_3:81881655-81881674 Msa1129860:CDS 50.0%
GTGTCACAGGAATCTCTGTC+CGG - chr7_3:81881677-81881696 None:intergenic 50.0%
CTCTGCATGCTGCAACTTCA+CGG - chr7_3:81881769-81881788 None:intergenic 50.0%
!!! TGGTTTTGGGTCATCTGACC+AGG + chr7_3:81881852-81881871 Msa1129860:exon 50.0%
!! GCATCGGCTATTTGTTCCCA+TGG + chr7_3:81880491-81880510 Msa1129860:CDS 50.0%
GCTGTGATGAATGCGTTCCA+TGG - chr7_3:81880511-81880530 None:intergenic 50.0%
ATACGGTCAACGCTTGCATC+GGG - chr7_3:81880559-81880578 None:intergenic 50.0%
GATACGGTCAACGCTTGCAT+CGG - chr7_3:81880560-81880579 None:intergenic 50.0%
TCCAACGTTGATCCTCACGT+GGG - chr7_3:81880662-81880681 None:intergenic 50.0%
ATCCAACGTTGATCCTCACG+TGG - chr7_3:81880663-81880682 None:intergenic 50.0%
CAAGCAAGGGAACTATGAGG+AGG - chr7_3:81880705-81880724 None:intergenic 50.0%
! GGTCGAGTCGGGTTGTATAA+CGG + chr7_3:81880742-81880761 Msa1129860:CDS 50.0%
! GTCGAGTCGGGTTGTATAAC+GGG + chr7_3:81880743-81880762 Msa1129860:CDS 50.0%
!! AACGGGTTTTACGTCACTGC+TGG + chr7_3:81880760-81880779 Msa1129860:CDS 50.0%
! ACGGGTTTTACGTCACTGCT+GGG + chr7_3:81880761-81880780 Msa1129860:CDS 50.0%
! TGTGGCTAATGCTTTGGTGC+AGG + chr7_3:81880801-81880820 Msa1129860:CDS 50.0%
! GTGGCTAATGCTTTGGTGCA+GGG + chr7_3:81880802-81880821 Msa1129860:CDS 50.0%
GTTTACACGCAAGATGCCTC+TGG + chr7_3:81881180-81881199 Msa1129860:CDS 50.0%
ACCATTGTCGTCTTCAACGG+CGG - chr7_3:81881334-81881353 None:intergenic 50.0%
! CAGTGAGGCTTTTGCCAACA+AGG - chr7_3:81881551-81881570 None:intergenic 50.0%
TGCACGGTCCGAAATTCTTC+CGG + chr7_3:81881655-81881674 Msa1129860:CDS 50.0%
GTGTCACAGGAATCTCTGTC+CGG - chr7_3:81881677-81881696 None:intergenic 50.0%
CTCTGCATGCTGCAACTTCA+CGG - chr7_3:81881769-81881788 None:intergenic 50.0%
!!! TGGTTTTGGGTCATCTGACC+AGG + chr7_3:81881852-81881871 Msa1129860:exon 50.0%
CAACGCTTGCATCGGGGTAA+AGG - chr7_3:81880552-81880571 None:intergenic 55.0%
TACGGTCAACGCTTGCATCG+GGG - chr7_3:81880558-81880577 None:intergenic 55.0%
TCCCACGTGAGGATCAACGT+TGG + chr7_3:81880658-81880677 Msa1129860:CDS 55.0%
! CGGGTTTTACGTCACTGCTG+GGG + chr7_3:81880762-81880781 Msa1129860:CDS 55.0%
! GGCTGTTGGGATTTCAGGTG+TGG + chr7_3:81880783-81880802 Msa1129860:CDS 55.0%
GGATCTATTCTTGGCTCCGC+TGG + chr7_3:81880823-81880842 Msa1129860:CDS 55.0%
! AGCACTCTTTTGCAGGCCAG+AGG - chr7_3:81881199-81881218 None:intergenic 55.0%
GTTGCAGCATGCAGAGACTG+CGG + chr7_3:81881773-81881792 Msa1129860:CDS 55.0%
TTGCAGCATGCAGAGACTGC+GGG + chr7_3:81881774-81881793 Msa1129860:CDS 55.0%
CAACGCTTGCATCGGGGTAA+AGG - chr7_3:81880552-81880571 None:intergenic 55.0%
TACGGTCAACGCTTGCATCG+GGG - chr7_3:81880558-81880577 None:intergenic 55.0%
TCCCACGTGAGGATCAACGT+TGG + chr7_3:81880658-81880677 Msa1129860:CDS 55.0%
! CGGGTTTTACGTCACTGCTG+GGG + chr7_3:81880762-81880781 Msa1129860:CDS 55.0%
! GGCTGTTGGGATTTCAGGTG+TGG + chr7_3:81880783-81880802 Msa1129860:CDS 55.0%
GGATCTATTCTTGGCTCCGC+TGG + chr7_3:81880823-81880842 Msa1129860:CDS 55.0%
! AGCACTCTTTTGCAGGCCAG+AGG - chr7_3:81881199-81881218 None:intergenic 55.0%
GTTGCAGCATGCAGAGACTG+CGG + chr7_3:81881773-81881792 Msa1129860:CDS 55.0%
TTGCAGCATGCAGAGACTGC+GGG + chr7_3:81881774-81881793 Msa1129860:CDS 55.0%
TACGTCACTGCTGGGGCTGT+TGG + chr7_3:81880769-81880788 Msa1129860:CDS 60.0%
ACGTCACTGCTGGGGCTGTT+GGG + chr7_3:81880770-81880789 Msa1129860:CDS 60.0%
GCTGGGGCTGTTGGGATTTC+AGG + chr7_3:81880778-81880797 Msa1129860:CDS 60.0%
TACACGCAGGCGGTCATTGC+TGG + chr7_3:81880862-81880881 Msa1129860:CDS 60.0%
ACACGCAGGCGGTCATTGCT+GGG + chr7_3:81880863-81880882 Msa1129860:CDS 60.0%
!! ATTGCTGGGGGTGCTGCTTC+TGG + chr7_3:81880877-81880896 Msa1129860:CDS 60.0%
GCCGCCGTTGAAGACGACAA+TGG + chr7_3:81881330-81881349 Msa1129860:CDS 60.0%
TGCAGCATGCAGAGACTGCG+GGG + chr7_3:81881775-81881794 Msa1129860:CDS 60.0%
TACGTCACTGCTGGGGCTGT+TGG + chr7_3:81880769-81880788 Msa1129860:CDS 60.0%
ACGTCACTGCTGGGGCTGTT+GGG + chr7_3:81880770-81880789 Msa1129860:CDS 60.0%
GCTGGGGCTGTTGGGATTTC+AGG + chr7_3:81880778-81880797 Msa1129860:CDS 60.0%
TACACGCAGGCGGTCATTGC+TGG + chr7_3:81880862-81880881 Msa1129860:CDS 60.0%
ACACGCAGGCGGTCATTGCT+GGG + chr7_3:81880863-81880882 Msa1129860:CDS 60.0%
!! ATTGCTGGGGGTGCTGCTTC+TGG + chr7_3:81880877-81880896 Msa1129860:CDS 60.0%
GCCGCCGTTGAAGACGACAA+TGG + chr7_3:81881330-81881349 Msa1129860:CDS 60.0%
TGCAGCATGCAGAGACTGCG+GGG + chr7_3:81881775-81881794 Msa1129860:CDS 60.0%
TGGCTCCGCTGGTGAGTTGC+CGG + chr7_3:81880834-81880853 Msa1129860:CDS 65.0%
CCTCTCCGGCAACTCACCAG+CGG - chr7_3:81880842-81880861 None:intergenic 65.0%
! GTTGCCGGAGAGGTACACGC+AGG + chr7_3:81880849-81880868 Msa1129860:CDS 65.0%
ACCGCCTGCGTGTACCTCTC+CGG - chr7_3:81880856-81880875 None:intergenic 65.0%
CACGCAGGCGGTCATTGCTG+GGG + chr7_3:81880864-81880883 Msa1129860:CDS 65.0%
ACGCAGGCGGTCATTGCTGG+GGG + chr7_3:81880865-81880884 Msa1129860:CDS 65.0%
TGGCTCCGCTGGTGAGTTGC+CGG + chr7_3:81880834-81880853 Msa1129860:CDS 65.0%
CCTCTCCGGCAACTCACCAG+CGG - chr7_3:81880842-81880861 None:intergenic 65.0%
! GTTGCCGGAGAGGTACACGC+AGG + chr7_3:81880849-81880868 Msa1129860:CDS 65.0%
ACCGCCTGCGTGTACCTCTC+CGG - chr7_3:81880856-81880875 None:intergenic 65.0%
CACGCAGGCGGTCATTGCTG+GGG + chr7_3:81880864-81880883 Msa1129860:CDS 65.0%
ACGCAGGCGGTCATTGCTGG+GGG + chr7_3:81880865-81880884 Msa1129860:CDS 65.0%
CCGCTGGTGAGTTGCCGGAG+AGG + chr7_3:81880839-81880858 Msa1129860:CDS 70.0%
! GCCGGAGAGGTACACGCAGG+CGG + chr7_3:81880852-81880871 Msa1129860:CDS 70.0%
CCGCTGGTGAGTTGCCGGAG+AGG + chr7_3:81880839-81880858 Msa1129860:CDS 70.0%
! GCCGGAGAGGTACACGCAGG+CGG + chr7_3:81880852-81880871 Msa1129860:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 81880379 81882077 81880379 ID=Msa1129860;Name=Msa1129860
chr7_3 mRNA 81880379 81882077 81880379 ID=Msa1129860-mRNA-1;Parent=Msa1129860;Name=Msa1129860-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|1|1|2|208|415
chr7_3 exon 81880379 81880898 81880379 ID=Msa1129860-mRNA-1:exon:23917;Parent=Msa1129860-mRNA-1
chr7_3 exon 81881142 81882077 81881142 ID=Msa1129860-mRNA-1:exon:23918;Parent=Msa1129860-mRNA-1
chr7_3 CDS 81880379 81880898 81880379 ID=Msa1129860-mRNA-1:cds;Parent=Msa1129860-mRNA-1
chr7_3 CDS 81881142 81881869 81881142 ID=Msa1129860-mRNA-1:cds;Parent=Msa1129860-mRNA-1
chr7_3 three_prime_UTR 81881870 81882077 81881870 ID=Msa1129860-mRNA-1:three_prime_utr;Parent=Msa1129860-mRNA-1
Gene Sequence

>Msa1129860

ATGTCACAAACAGAATCCACCATTGTTCTTCTTCTACCTTCATGTTCAAGGACGACAAAGAAAGTAGCAGAAGACAAATGGCACTTAGCATATATAATCTACTTCACACTTGGCATCGGCTATTTGTTCCCATGGAACGCATTCATCACAGCCGTTGATTACTTCTCTTACCTTTACCCCGATGCAAGCGTTGACCGTATCTTTGCTCTACTTTGCACGCTTGTTAGTCTTGTTACTCTCTTCCTCATCATCATCATCCTCAACCGACACAAATCTCATTCCCACGTGAGGATCAACGTTGGATTAGCACTGTTTGTTGTTTCCCTCCTCATAGTTCCCTTGCTTGATGTCGTGTATGTTAAGGGTCGAGTCGGGTTGTATAACGGGTTTTACGTCACTGCTGGGGCTGTTGGGATTTCAGGTGTGGCTAATGCTTTGGTGCAGGGATCTATTCTTGGCTCCGCTGGTGAGTTGCCGGAGAGGTACACGCAGGCGGTCATTGCTGGGGGTGCTGCTTCTGGGGTGCTTGTTTCTTTCCTAAGGATATTTACAAAAGCTGTTTACACGCAAGATGCCTCTGGCCTGCAAAAGAGTGCTAATCTCTACTTTGCTGTATCAATTGTGATTATGTTCATATGCATGGTTTTATACAATCTAGCTCACAAACTTCCCATTATAAAGTACTATAATGAACTTAAGATTCAGGCGGCCGCCGTTGAAGACGACAATGGTCCTTTGACAGTATCTGTCTGGAGATCAACTGTATGGGATACCTTAGGAACAATCAAGTGGTATGGGCTCGGCATCATGCTCATTTATGTTGTGACGCTTGCAATATTTCCTGGTTACATTACAGAAGATGTCCACTCTCAGCTTCTTAAAGATTGGTATCCAATTCTCCTTATTACTTGCTTTAATGTGTTTGACCTTGTTGGCAAAAGCCTCACTGCAGTATACCTTCTAGAGAATGCAAAAATTGCAATCGGTTGTTGCATAGCAAGACTGTTGTTTTTCCCTCTCTTCTTAGGATGCTTGCACGGTCCGAAATTCTTCCGGACAGAGATTCCTGTGACACTATTAACGTGTCTCTTAGGGCTTACAAATGGATACCTTACCAGTGTATTGATGATTTTAGCTCCTAAAACCGTGAAGTTGCAGCATGCAGAGACTGCGGGGATTGTGAGTGTGTTCTTCTTAGTTATTGGTCTGGCTGCTGGCTCTATTATAGCTTGGTTTTGGGTCATCTGA
Protein sequence

>Msa1129860

MSQTESTIVLLLPSCSRTTKKVAEDKWHLAYIIYFTLGIGYLFPWNAFITAVDYFSYLYPDASVDRIFALLCTLVSLVTLFLIIIILNRHKSHSHVRINVGLALFVVSLLIVPLLDVVYVKGRVGLYNGFYVTAGAVGISGVANALVQGSILGSAGELPERYTQAVIAGGAASGVLVSFLRIFTKAVYTQDASGLQKSANLYFAVSIVIMFICMVLYNLAHKLPIIKYYNELKIQAAAVEDDNGPLTVSVWRSTVWDTLGTIKWYGLGIMLIYVVTLAIFPGYITEDVHSQLLKDWYPILLITCFNVFDLVGKSLTAVYLLENAKIAIGCCIARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKTVKLQHAETAGIVSVFFLVIGLAAGSIIAWFWVI*