Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184200 | sp|Q9M0V4|YAO_ARATH | 54.455 | 505 | 197 | 8 | 10 | 503 | 22 | 504 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184200 | G7IJV2 | 98.214 | 504 | 8 | 1 | 1 | 503 | 1 | 504 | 0.0 | 1010 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0184200 | Msa0195340 | 0.994116 | 1.086661e-204 | -8.615850e-47 |
| Msa0184200 | Msa0278910 | 0.811137 | 8.136181e-51 | -8.615850e-47 |
| Msa0184200 | Msa0297630 | 0.802440 | 5.603549e-49 | -8.615850e-47 |
| Msa0184200 | Msa0485510 | 0.853740 | 1.957024e-61 | -8.615850e-47 |
| Msa0184200 | Msa0573140 | 0.806216 | 9.162133e-50 | -8.615850e-47 |
| Msa0184200 | Msa0648780 | 0.824422 | 8.141541e-54 | -8.615850e-47 |
| Msa0184200 | Msa1012740 | 0.800677 | 1.287977e-48 | -8.615850e-47 |
| Msa0184200 | Msa1066190 | 0.805778 | 1.132743e-49 | -8.615850e-47 |
| Msa0184200 | Msa1153060 | 0.814686 | 1.357872e-51 | -8.615850e-47 |
| Msa0184200 | Msa1209850 | 0.810445 | 1.148861e-50 | -8.615850e-47 |
| Msa0184200 | Msa1225720 | 0.825483 | 4.575087e-54 | -8.615850e-47 |
| Msa0184200 | Msa1258390 | 0.836015 | 1.198556e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184200 | MtrunA17_Chr2g0292301 | 98.214 | 504 | 8 | 1 | 1 | 503 | 1 | 504 | 0.0 | 1010 |
| Msa0184200 | MtrunA17_Chr8g0392701 | 26.697 | 221 | 138 | 4 | 144 | 359 | 59 | 260 | 3.89e-16 | 79.7 |
| Msa0184200 | MtrunA17_Chr1g0176241 | 33.607 | 122 | 80 | 1 | 199 | 319 | 360 | 481 | 1.62e-15 | 79.0 |
| Msa0184200 | MtrunA17_Chr4g0059031 | 33.514 | 185 | 94 | 7 | 151 | 325 | 63 | 228 | 7.35e-15 | 77.8 |
| Msa0184200 | MtrunA17_Chr3g0093681 | 29.545 | 176 | 101 | 5 | 147 | 319 | 397 | 552 | 3.25e-14 | 75.1 |
| Msa0184200 | MtrunA17_Chr1g0172501 | 29.545 | 176 | 101 | 5 | 147 | 319 | 397 | 552 | 9.76e-14 | 73.6 |
| Msa0184200 | MtrunA17_Chr2g0295791 | 25.114 | 219 | 143 | 3 | 143 | 359 | 207 | 406 | 7.07e-13 | 70.9 |
| Msa0184200 | MtrunA17_Chr5g0401671 | 26.724 | 232 | 161 | 6 | 144 | 371 | 243 | 469 | 8.87e-13 | 70.9 |
| Msa0184200 | MtrunA17_Chr7g0246741 | 29.375 | 160 | 94 | 3 | 141 | 299 | 404 | 545 | 1.81e-12 | 70.1 |
| Msa0184200 | MtrunA17_Chr4g0053651 | 21.914 | 324 | 209 | 7 | 147 | 442 | 229 | 536 | 2.59e-12 | 69.3 |
| Msa0184200 | MtrunA17_Chr4g0067151 | 22.845 | 232 | 151 | 6 | 147 | 370 | 77 | 288 | 6.46e-12 | 66.6 |
| Msa0184200 | MtrunA17_Chr4g0067151 | 24.891 | 229 | 144 | 7 | 142 | 359 | 21 | 232 | 3.53e-11 | 64.7 |
| Msa0184200 | MtrunA17_Chr1g0200901 | 30.588 | 170 | 113 | 4 | 206 | 371 | 77 | 245 | 7.23e-12 | 67.4 |
| Msa0184200 | MtrunA17_Chr4g0069701 | 26.404 | 178 | 117 | 4 | 196 | 359 | 516 | 693 | 8.37e-12 | 67.8 |
| Msa0184200 | MtrunA17_Chr4g0069701 | 27.848 | 158 | 94 | 4 | 169 | 325 | 85 | 223 | 1.98e-11 | 66.6 |
| Msa0184200 | MtrunA17_Chr1g0185501 | 21.795 | 234 | 157 | 5 | 144 | 370 | 65 | 279 | 9.42e-12 | 66.2 |
| Msa0184200 | MtrunA17_Chr4g0058091 | 22.944 | 231 | 163 | 5 | 224 | 441 | 245 | 473 | 2.65e-11 | 65.9 |
| Msa0184200 | MtrunA17_Chr3g0136971 | 35.000 | 120 | 59 | 2 | 165 | 284 | 520 | 620 | 3.01e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0184200 | AT4G05410.1 | 54.455 | 505 | 197 | 8 | 10 | 503 | 22 | 504 | 0.0 | 526 |
| Msa0184200 | AT4G21130.1 | 52.569 | 506 | 202 | 5 | 1 | 503 | 9 | 479 | 2.37e-174 | 499 |
| Msa0184200 | AT3G18130.1 | 24.671 | 304 | 184 | 9 | 144 | 441 | 59 | 323 | 2.04e-16 | 80.9 |
| Msa0184200 | AT1G48630.1 | 24.342 | 304 | 185 | 9 | 144 | 441 | 59 | 323 | 1.64e-15 | 78.2 |
| Msa0184200 | AT1G48630.1 | 26.778 | 239 | 147 | 8 | 143 | 370 | 10 | 231 | 1.99e-12 | 68.9 |
| Msa0184200 | AT5G52820.1 | 32.520 | 123 | 82 | 1 | 199 | 320 | 350 | 472 | 3.18e-15 | 78.6 |
| Msa0184200 | AT2G32700.6 | 24.286 | 210 | 116 | 4 | 207 | 373 | 506 | 715 | 6.98e-15 | 78.2 |
| Msa0184200 | AT2G32700.2 | 24.286 | 210 | 116 | 4 | 207 | 373 | 508 | 717 | 7.17e-15 | 78.2 |
| Msa0184200 | AT2G32700.5 | 24.286 | 210 | 116 | 4 | 207 | 373 | 508 | 717 | 7.17e-15 | 78.2 |
| Msa0184200 | AT2G32700.1 | 24.286 | 210 | 116 | 4 | 207 | 373 | 508 | 717 | 7.17e-15 | 78.2 |
| Msa0184200 | AT2G32700.4 | 24.286 | 210 | 116 | 4 | 207 | 373 | 508 | 717 | 7.17e-15 | 78.2 |
| Msa0184200 | AT2G32700.3 | 24.286 | 210 | 116 | 4 | 207 | 373 | 508 | 717 | 7.17e-15 | 78.2 |
| Msa0184200 | AT2G32700.7 | 24.286 | 210 | 116 | 4 | 207 | 373 | 527 | 736 | 7.73e-15 | 77.8 |
| Msa0184200 | AT5G16750.1 | 32.967 | 182 | 96 | 6 | 151 | 325 | 63 | 225 | 1.21e-14 | 77.4 |
| Msa0184200 | AT3G21540.1 | 32.911 | 158 | 86 | 4 | 169 | 325 | 85 | 223 | 5.32e-14 | 75.5 |
| Msa0184200 | AT1G18080.1 | 25.225 | 222 | 141 | 4 | 144 | 359 | 59 | 261 | 1.52e-13 | 72.0 |
| Msa0184200 | AT5G67320.1 | 26.201 | 229 | 160 | 5 | 147 | 371 | 264 | 487 | 3.77e-13 | 72.4 |
| Msa0184200 | AT2G05720.1 | 30.625 | 160 | 105 | 4 | 147 | 300 | 105 | 264 | 1.59e-12 | 68.6 |
| Msa0184200 | AT1G61210.3 | 28.713 | 202 | 121 | 5 | 141 | 319 | 51 | 252 | 3.23e-12 | 69.7 |
| Msa0184200 | AT1G61210.2 | 29.487 | 156 | 89 | 2 | 165 | 319 | 117 | 252 | 4.20e-12 | 69.3 |
| Msa0184200 | AT1G61210.1 | 29.487 | 156 | 89 | 2 | 165 | 319 | 117 | 252 | 4.21e-12 | 69.3 |
| Msa0184200 | AT4G15900.1 | 25.114 | 219 | 143 | 3 | 143 | 359 | 213 | 412 | 5.07e-12 | 68.6 |
| Msa0184200 | AT1G11160.3 | 26.238 | 202 | 126 | 4 | 141 | 319 | 9 | 210 | 9.34e-12 | 68.2 |
| Msa0184200 | AT1G24130.1 | 27.957 | 186 | 104 | 7 | 145 | 320 | 189 | 354 | 1.79e-11 | 66.6 |
| Msa0184200 | AT1G11160.4 | 26.500 | 200 | 124 | 4 | 143 | 319 | 53 | 252 | 1.92e-11 | 67.4 |
| Msa0184200 | AT1G11160.1 | 26.500 | 200 | 124 | 4 | 143 | 319 | 53 | 252 | 2.14e-11 | 67.0 |
| Msa0184200 | AT1G11160.2 | 26.500 | 200 | 124 | 4 | 143 | 319 | 53 | 252 | 2.20e-11 | 67.0 |
| Msa0184200 | AT5G50230.1 | 22.318 | 233 | 162 | 7 | 224 | 441 | 240 | 468 | 2.24e-11 | 66.6 |
| Msa0184200 | AT1G15440.2 | 28.125 | 160 | 96 | 3 | 141 | 299 | 384 | 525 | 2.61e-11 | 66.6 |
| Msa0184200 | AT1G15440.1 | 28.125 | 160 | 96 | 3 | 141 | 299 | 424 | 565 | 2.80e-11 | 66.6 |
| Msa0184200 | AT5G25150.1 | 32.500 | 120 | 62 | 2 | 165 | 284 | 519 | 619 | 6.95e-11 | 65.1 |
| Msa0184200 | AT5G25150.2 | 32.500 | 120 | 62 | 2 | 165 | 284 | 519 | 619 | 7.69e-11 | 65.1 |
| Msa0184200 | AT1G24530.1 | 25.703 | 249 | 126 | 10 | 145 | 366 | 192 | 408 | 9.41e-11 | 64.3 |
Find 142 sgRNAs with CRISPR-Local
Find 383 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTAGTATGCAGTTGTTTA+AGG | 0.158441 | 1_4:-73457350 | Msa0184200:intron |
| ATTTGGGAAATTTGAGATTT+TGG | 0.169592 | 1_4:+73459140 | None:intergenic |
| GGGTTAGGGTTTCAGAGATT+TGG | 0.240860 | 1_4:+73459123 | None:intergenic |
| TTGATCGTCATATTCATATA+TGG | 0.249177 | 1_4:-73458072 | Msa0184200:CDS |
| TTTATCTGAGGATGATTCTA+AGG | 0.262062 | 1_4:-73458293 | Msa0184200:CDS |
| GGTTGGGTTTGTCAATTCTT+TGG | 0.267712 | 1_4:-73456348 | Msa0184200:CDS |
| ATGAAGCGGTTTAATGTCTT+TGG | 0.274416 | 1_4:+73456494 | None:intergenic |
| GGTTAGGGTTTCAGAGATTT+GGG | 0.286494 | 1_4:+73459124 | None:intergenic |
| GCGGGCATGATTGAATTGTT+AGG | 0.297387 | 1_4:+73459102 | None:intergenic |
| TTCTTGCGGTTGTTCTTTGC+GGG | 0.303078 | 1_4:+73459084 | None:intergenic |
| TGATGGTAGCATTGAGCTTT+GGG | 0.320486 | 1_4:-73457002 | Msa0184200:CDS |
| GATGGTCGCTATTTGGCAAC+TGG | 0.323491 | 1_4:-73458100 | Msa0184200:CDS |
| TGTGTTATTTAGGGTTAAAC+TGG | 0.332866 | 1_4:-73458374 | Msa0184200:intron |
| ATGATTGAATTGTTAGGGTT+AGG | 0.333769 | 1_4:+73459108 | None:intergenic |
| AAGTTCAGATGGTCGCTATT+TGG | 0.336260 | 1_4:-73458107 | Msa0184200:CDS |
| AACAAAACAACAGCATTCTA+AGG | 0.349174 | 1_4:+73457054 | None:intergenic |
| CTTCTTGCGGTTGTTCTTTG+CGG | 0.352672 | 1_4:+73459083 | None:intergenic |
| GCCGCATCTGGTGCGGGTAA+TGG | 0.356528 | 1_4:-73456549 | Msa0184200:CDS |
| TAGAGGTCCTGTTTCTTCTC+TGG | 0.361793 | 1_4:-73457539 | Msa0184200:CDS |
| TTCAAAATTCTCAAAACAAT+CGG | 0.367746 | 1_4:+73454515 | None:intergenic |
| TGATTGAATTGTTAGGGTTA+GGG | 0.371619 | 1_4:+73459109 | None:intergenic |
| TCAGCAAAATTCCTAGTTGC+TGG | 0.374225 | 1_4:-73456314 | Msa0184200:CDS |
| GCGCACTAGGGAGCATCTTC+AGG | 0.377779 | 1_4:-73458044 | Msa0184200:intron |
| TTGATCGAACGATTAAGATA+TGG | 0.379793 | 1_4:-73457477 | Msa0184200:CDS |
| ATGATGGTAGCATTGAGCTT+TGG | 0.379946 | 1_4:-73457003 | Msa0184200:CDS |
| AACAGTGACCTTGCCGCATC+TGG | 0.381669 | 1_4:-73456561 | Msa0184200:CDS |
| GGCGGCTACTCTGCGGCGTT+TGG | 0.384477 | 1_4:+73459026 | None:intergenic |
| GGCTACTCTGCGGCGTTTGG+TGG | 0.386767 | 1_4:+73459029 | None:intergenic |
| AATAATGAGGAATTCTTGTC+TGG | 0.393333 | 1_4:-73457031 | Msa0184200:CDS |
| GAGTAGCTGAGGAGTATTTG+AGG | 0.396735 | 1_4:-73458882 | Msa0184200:CDS |
| ATTGTTCGTCAGTACACTCT+TGG | 0.407718 | 1_4:-73456608 | Msa0184200:CDS |
| TCAGAAAAGCTATTGCTTCA+AGG | 0.412080 | 1_4:-73458714 | Msa0184200:intron |
| CGGGCATGATTGAATTGTTA+GGG | 0.419522 | 1_4:+73459103 | None:intergenic |
| AAATTCCTAGTTGCTGGAGT+TGG | 0.422760 | 1_4:-73456308 | Msa0184200:CDS |
| ATCGAAAGGTGAAGGGGAAC+AGG | 0.431103 | 1_4:-73458941 | Msa0184200:CDS |
| TCTATGAGTAAGCGAGGCTT+TGG | 0.436605 | 1_4:-73454383 | Msa0184200:three_prime_UTR |
| TGAGGAATTCTTGTCTGGTT+CGG | 0.438253 | 1_4:-73457026 | Msa0184200:CDS |
| TTGATTGTTTACGCAAAGAA+AGG | 0.438257 | 1_4:-73457393 | Msa0184200:CDS |
| TTCTTGTCTGGTTCGGATGA+TGG | 0.442227 | 1_4:-73457019 | Msa0184200:CDS |
| TACTTAATACTTCACTTTGG+TGG | 0.445587 | 1_4:+73457416 | None:intergenic |
| ACTTACATGAATACTCTGTT+TGG | 0.448065 | 1_4:-73457439 | Msa0184200:CDS |
| TCTGAAGTCCCATGGCTTGA+AGG | 0.451032 | 1_4:-73458182 | Msa0184200:CDS |
| AATTCCTAGTTGCTGGAGTT+GGG | 0.454442 | 1_4:-73456307 | Msa0184200:CDS |
| GGACTTCAGAACCGAATCAA+TGG | 0.457791 | 1_4:+73458195 | None:intergenic |
| GCTATCGACGAAGATGATAA+AGG | 0.458031 | 1_4:-73458761 | Msa0184200:CDS |
| TGATCGTCATATTCATATAT+GGG | 0.461527 | 1_4:-73458071 | Msa0184200:CDS |
| GTATAAGTGGCCCATTGATT+CGG | 0.462919 | 1_4:-73458206 | Msa0184200:CDS |
| ATGAAGATGAGGATGGGGCA+AGG | 0.478613 | 1_4:-73458789 | Msa0184200:CDS |
| GCATTCCTCAAAATATGAAT+AGG | 0.478685 | 1_4:+73456962 | None:intergenic |
| TCTCATGATGACAATTTAAG+TGG | 0.478829 | 1_4:+73454661 | None:intergenic |
| TGACGAACAATGGTGATTCT+CGG | 0.481332 | 1_4:+73456620 | None:intergenic |
| GACCTTGCCGCATCTGGTGC+GGG | 0.481462 | 1_4:-73456555 | Msa0184200:CDS |
| CCTAGTTGCTGGAGTTGGGC+AGG | 0.482464 | 1_4:-73456303 | Msa0184200:intron |
| GACGAACAATGGTGATTCTC+GGG | 0.482880 | 1_4:+73456621 | None:intergenic |
| GGAAGTTTAAAGATAGTGCT+AGG | 0.483861 | 1_4:-73458861 | Msa0184200:CDS |
| AAAGACAAAGGTTGCAGCTA+GGG | 0.486534 | 1_4:+73459185 | None:intergenic |
| TGTTCCCCTTCACCTTTCGA+TGG | 0.486752 | 1_4:+73458943 | None:intergenic |
| GCTACTCTGCGGCGTTTGGT+GGG | 0.489709 | 1_4:+73459030 | None:intergenic |
| TCAAAATTCTCAAAACAATC+GGG | 0.497032 | 1_4:+73454516 | None:intergenic |
| TGACCTTGCCGCATCTGGTG+CGG | 0.500692 | 1_4:-73456556 | Msa0184200:CDS |
| GACTTCAGAACCGAATCAAT+GGG | 0.500825 | 1_4:+73458196 | None:intergenic |
| CTAAAAGCCAGAGAAGAAAC+AGG | 0.502189 | 1_4:+73457532 | None:intergenic |
| AGATGGAAGCATTGTGCAAT+GGG | 0.503563 | 1_4:-73458254 | Msa0184200:CDS |
| CAAAGAGATGAAGATGATGA+TGG | 0.512344 | 1_4:-73458826 | Msa0184200:CDS |
| TTGTTCGTCAGTACACTCTT+GGG | 0.515002 | 1_4:-73456607 | Msa0184200:CDS |
| CTCAGCATCTTGATCTTCAT+CGG | 0.521698 | 1_4:+73459005 | None:intergenic |
| CAATACTTAATACTTCACTT+TGG | 0.525590 | 1_4:+73457413 | None:intergenic |
| TTATTTAGGGTTAAACTGGA+TGG | 0.527005 | 1_4:-73458370 | Msa0184200:intron |
| TGAAGATGAGGATGGGGCAA+GGG | 0.529509 | 1_4:-73458788 | Msa0184200:CDS |
| GCAATTAGTCAAAATTGAAG+AGG | 0.530500 | 1_4:+73454617 | None:intergenic |
| ATATATGGGATACGCGCACT+AGG | 0.531446 | 1_4:-73458057 | Msa0184200:CDS |
| ACTTTGGCTGCAAGTTCAGA+TGG | 0.532678 | 1_4:-73458118 | Msa0184200:CDS |
| ATGGTCGCTATTTGGCAACT+GGG | 0.534092 | 1_4:-73458099 | Msa0184200:CDS |
| TTTGTTCCATCGAAAGGTGA+AGG | 0.537167 | 1_4:-73458949 | Msa0184200:CDS |
| TTATCTGAGGATGATTCTAA+GGG | 0.538043 | 1_4:-73458292 | Msa0184200:CDS |
| CCTGCCCAACTCCAGCAACT+AGG | 0.543124 | 1_4:+73456303 | None:intergenic |
| AAAGAAAGGGTATTATCTGC+TGG | 0.543326 | 1_4:-73457379 | Msa0184200:CDS |
| GATTCGGTTCTGAAGTCCCA+TGG | 0.547975 | 1_4:-73458190 | Msa0184200:CDS |
| AGGTTTACCTAGGTTACCGT+TGG | 0.548172 | 1_4:+73456883 | None:intergenic |
| AGGAAACTACAGCTGAAGCT+AGG | 0.549075 | 1_4:-73458909 | Msa0184200:CDS |
| TGATTGTTTACGCAAAGAAA+GGG | 0.549662 | 1_4:-73457392 | Msa0184200:CDS |
| AGAATACGTGAAGCTCGTAA+TGG | 0.550611 | 1_4:-73454697 | Msa0184200:CDS |
| AGGAACCTCGTCTAGGAAGG+TGG | 0.554796 | 1_4:-73454723 | Msa0184200:CDS |
| CAAAGACAAAGGTTGCAGCT+AGG | 0.555995 | 1_4:+73459184 | None:intergenic |
| TACAGGAACCTCGTCTAGGA+AGG | 0.557034 | 1_4:-73454726 | Msa0184200:intron |
| TTGTTCCATCGAAAGGTGAA+GGG | 0.560861 | 1_4:-73458948 | Msa0184200:CDS |
| CAGCATTCTAAGGAAGATGC+AGG | 0.563049 | 1_4:+73457064 | None:intergenic |
| ATACTACCCAACGGTAACCT+AGG | 0.563236 | 1_4:-73456890 | Msa0184200:intron |
| CTTGAGGATCCTTCAAGCCA+TGG | 0.567504 | 1_4:+73458173 | None:intergenic |
| GGAACCTCGTCTAGGAAGGT+GGG | 0.567525 | 1_4:-73454722 | Msa0184200:CDS |
| ACCGCTTCATAATGTACCGT+TGG | 0.569065 | 1_4:-73456481 | Msa0184200:intron |
| GATGATGATGAAGATGAGGA+TGG | 0.575039 | 1_4:-73458796 | Msa0184200:CDS |
| ACCATTACCCGCACCAGATG+CGG | 0.576457 | 1_4:+73456548 | None:intergenic |
| AAGATGGAAGCATTGTGCAA+TGG | 0.576859 | 1_4:-73458255 | Msa0184200:CDS |
| CTTCCCCACCTTCCTAGACG+AGG | 0.577906 | 1_4:+73454718 | None:intergenic |
| TTGAGGATCCTTCAAGCCAT+GGG | 0.579870 | 1_4:+73458174 | None:intergenic |
| AGGGTTAAACTGGATGGTCA+TGG | 0.580849 | 1_4:-73458364 | Msa0184200:CDS |
| AACAATGGTGATTCTCGGGA+TGG | 0.581006 | 1_4:+73456625 | None:intergenic |
| AGCTAGGAAGAGAGTAGCTG+AGG | 0.585734 | 1_4:-73458893 | Msa0184200:CDS |
| TGATGATGAAGATGAGGATG+GGG | 0.586713 | 1_4:-73458794 | Msa0184200:CDS |
| GGTTTACCTAGGTTACCGTT+GGG | 0.589730 | 1_4:+73456884 | None:intergenic |
| AGATAGTGCTAGGAGAGAGA+AGG | 0.590376 | 1_4:-73458851 | Msa0184200:CDS |
| GGAAATGTGAGAGGTATAAG+TGG | 0.597715 | 1_4:-73458219 | Msa0184200:CDS |
| TACCCGCACCAGATGCGGCA+AGG | 0.597735 | 1_4:+73456553 | None:intergenic |
| ATGATGATGAAGATGAGGAT+GGG | 0.602093 | 1_4:-73458795 | Msa0184200:CDS |
| GATACATATAATTAAGATCA+CGG | 0.603779 | 1_4:+73454562 | None:intergenic |
| TACTGCGGTGGCTTTATCTG+AGG | 0.604178 | 1_4:-73458305 | Msa0184200:CDS |
| GAACCTCGTCTAGGAAGGTG+GGG | 0.608130 | 1_4:-73454721 | Msa0184200:CDS |
| TTGTAGACATTTGTTCACTT+AGG | 0.609294 | 1_4:-73454408 | Msa0184200:three_prime_UTR |
| TCCTACGTTGAAAAGACTTG+AGG | 0.609433 | 1_4:-73454478 | Msa0184200:three_prime_UTR |
| TCAGTGCAGTGACCGTCTGT+AGG | 0.612967 | 1_4:-73456584 | Msa0184200:CDS |
| TGCAATGGGATGTTGAGAGT+GGG | 0.616349 | 1_4:-73458240 | Msa0184200:CDS |
| ACAACTGCATACTACGATCA+CGG | 0.616853 | 1_4:+73457356 | None:intergenic |
| TTGAGAGTGGGAAATGTGAG+AGG | 0.619145 | 1_4:-73458228 | Msa0184200:CDS |
| ACCAACGGTACATTATGAAG+CGG | 0.619771 | 1_4:+73456480 | None:intergenic |
| TGTTCCATCGAAAGGTGAAG+GGG | 0.620286 | 1_4:-73458947 | Msa0184200:CDS |
| TGCTTTGTAGCAGAACCTTG+AGG | 0.621073 | 1_4:+73458157 | None:intergenic |
| TATATGGGATACGCGCACTA+GGG | 0.624499 | 1_4:-73458056 | Msa0184200:CDS |
| AATTGTCATCATGAGATCTG+AGG | 0.624527 | 1_4:-73454654 | Msa0184200:exon |
| GGTCGCGTGAATTCTTCTTG+CGG | 0.627721 | 1_4:+73459070 | None:intergenic |
| GATGATAAAGGAGCAGCAAG+AGG | 0.629548 | 1_4:-73458749 | Msa0184200:CDS |
| TGGTCGCTATTTGGCAACTG+GGG | 0.630469 | 1_4:-73458098 | Msa0184200:CDS |
| AAGGTCACTGTTCCTACAGA+CGG | 0.637361 | 1_4:+73456572 | None:intergenic |
| AAGAGTGTACTGACGAACAA+TGG | 0.638794 | 1_4:+73456610 | None:intergenic |
| AAACGATCCAGAAAATAGCT+CGG | 0.640991 | 1_4:+73457498 | None:intergenic |
| GGTCGCTATTTGGCAACTGG+GGG | 0.641423 | 1_4:-73458097 | Msa0184200:CDS |
| GAAACAGGACCTCTATGACC+AGG | 0.641871 | 1_4:+73457547 | None:intergenic |
| AAGGAGCAGCAAGAGGAGAG+TGG | 0.643486 | 1_4:-73458742 | Msa0184200:CDS |
| AGCATCTTGATCTTCATCGG+CGG | 0.643638 | 1_4:+73459008 | None:intergenic |
| GATTAAGATATGGAATGTTG+AGG | 0.643891 | 1_4:-73457467 | Msa0184200:CDS |
| TAAACAATGTGTTACTGCGG+TGG | 0.645198 | 1_4:-73458317 | Msa0184200:CDS |
| AGGGGAACAGGAGTCTGAAG+AGG | 0.648059 | 1_4:-73458929 | Msa0184200:CDS |
| AATGGTGATTCTCGGGATGG+TGG | 0.653592 | 1_4:+73456628 | None:intergenic |
| GTGCAATGGGATGTTGAGAG+TGG | 0.654323 | 1_4:-73458241 | Msa0184200:CDS |
| GTTAAACTGGATGGTCATGG+TGG | 0.654394 | 1_4:-73458361 | Msa0184200:CDS |
| TAGGCATCTATGAGTAAGCG+AGG | 0.656558 | 1_4:-73454389 | Msa0184200:three_prime_UTR |
| CATGGCTTGAAGGATCCTCA+AGG | 0.657629 | 1_4:-73458172 | Msa0184200:CDS |
| GATGGTAGCATTGAGCTTTG+GGG | 0.661259 | 1_4:-73457001 | Msa0184200:CDS |
| GATAGTGAAATACTACCCAA+CGG | 0.686398 | 1_4:-73456899 | Msa0184200:CDS |
| TATCTGAGGATGATTCTAAG+GGG | 0.700099 | 1_4:-73458291 | Msa0184200:CDS |
| CTTCATCGGCGGCTACTCTG+CGG | 0.710277 | 1_4:+73459019 | None:intergenic |
| GCATAAACAATGTGTTACTG+CGG | 0.761595 | 1_4:-73458320 | Msa0184200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAGTGATTAATTAAT+AGG | - | chr1_4:73456338-73456357 | Msa0184200:CDS | 10.0% |
| !!! | ATTAGTATATTGTTTTTTAA+TGG | - | chr1_4:73458661-73458680 | Msa0184200:intron | 10.0% |
| !!! | TTAGTATATTGTTTTTTAAT+GGG | - | chr1_4:73458662-73458681 | Msa0184200:intron | 10.0% |
| !! | ATTATTCAATTAAACCAAAA+GGG | + | chr1_4:73455003-73455022 | None:intergenic | 15.0% |
| !! | AATTATTCAATTAAACCAAA+AGG | + | chr1_4:73455004-73455023 | None:intergenic | 15.0% |
| !! | TTGAATAATTATTGAAACAA+TGG | - | chr1_4:73455014-73455033 | Msa0184200:intron | 15.0% |
| !! | ATTATTCATTTAAACCAAAA+GGG | + | chr1_4:73455061-73455080 | None:intergenic | 15.0% |
| !! | AATTATTCATTTAAACCAAA+AGG | + | chr1_4:73455062-73455081 | None:intergenic | 15.0% |
| !! | TAATTGAATAATTAAAGCAA+TGG | - | chr1_4:73455112-73455131 | Msa0184200:intron | 15.0% |
| !! | AATTGAATAATTAAAGCAAT+GGG | - | chr1_4:73455113-73455132 | Msa0184200:intron | 15.0% |
| !! | ATATTCAAAAATACAATTGT+TGG | - | chr1_4:73455602-73455621 | Msa0184200:intron | 15.0% |
| !! | GAATTACTAAATACAAATTA+AGG | + | chr1_4:73455880-73455899 | None:intergenic | 15.0% |
| !! | AATTTGTATTTAGTAATTCT+TGG | - | chr1_4:73455881-73455900 | Msa0184200:intron | 15.0% |
| !! | AAATGAAAATATAATCATTG+AGG | + | chr1_4:73456803-73456822 | None:intergenic | 15.0% |
| !! | AACTAAACTCATTTATTTAT+TGG | - | chr1_4:73457122-73457141 | Msa0184200:intron | 15.0% |
| !!! | ATTTTACTTAATTTTCTCTT+TGG | - | chr1_4:73457339-73457358 | Msa0184200:intron | 15.0% |
| !! | TAAAAAATTGTATTGTAGAA+GGG | + | chr1_4:73457715-73457734 | None:intergenic | 15.0% |
| !!! | ATCCAAAGTATAAATTTTTA+AGG | + | chr1_4:73457916-73457935 | None:intergenic | 15.0% |
| !! | TTAGTATAAGCATATTAATA+TGG | - | chr1_4:73457987-73458006 | Msa0184200:intron | 15.0% |
| !!! | ATTTGAGATTTTGGTTTTTA+GGG | + | chr1_4:73454418-73454437 | None:intergenic | 20.0% |
| !!! | AATTTGAGATTTTGGTTTTT+AGG | + | chr1_4:73454419-73454438 | None:intergenic | 20.0% |
| !! | AACAAGCAATTTAACAAAAA+GGG | + | chr1_4:73454951-73454970 | None:intergenic | 20.0% |
| !! | AAACAAGCAATTTAACAAAA+AGG | + | chr1_4:73454952-73454971 | None:intergenic | 20.0% |
| !! | TAAATGAATAATTGAAGCAA+TGG | - | chr1_4:73455069-73455088 | Msa0184200:intron | 20.0% |
| !! | AAATGAATAATTGAAGCAAT+GGG | - | chr1_4:73455070-73455089 | Msa0184200:intron | 20.0% |
| !!! | ACAATTGTTGGATATTTTTT+TGG | - | chr1_4:73455614-73455633 | Msa0184200:intron | 20.0% |
| !!! | CAATTGTTGGATATTTTTTT+GGG | - | chr1_4:73455615-73455634 | Msa0184200:intron | 20.0% |
| !!! | AATTGTTGGATATTTTTTTG+GGG | - | chr1_4:73455616-73455635 | Msa0184200:intron | 20.0% |
| !! | TTGTTTGTATTTACAGATTA+AGG | - | chr1_4:73455681-73455700 | Msa0184200:intron | 20.0% |
| !! | TGTTTGTATTTACAGATTAA+GGG | - | chr1_4:73455682-73455701 | Msa0184200:intron | 20.0% |
| !! | ATGTTATATGTTAACATAAG+CGG | - | chr1_4:73455846-73455865 | Msa0184200:intron | 20.0% |
| !! | ACTATCAATACAGTATTTAA+AGG | + | chr1_4:73456704-73456723 | None:intergenic | 20.0% |
| !! | ACAAATGACAGATATATTTA+CGG | + | chr1_4:73456829-73456848 | None:intergenic | 20.0% |
| !!! | TAATAAATCTTTTGTATCAC+AGG | - | chr1_4:73457195-73457214 | Msa0184200:intron | 20.0% |
| !! | AATCACTATTTCAAAAAAGA+TGG | + | chr1_4:73457443-73457462 | None:intergenic | 20.0% |
| !! | CTAAAAAATTGTATTGTAGA+AGG | + | chr1_4:73457716-73457735 | None:intergenic | 20.0% |
| !! | TGCCTTAAAAATTTATACTT+TGG | - | chr1_4:73457911-73457930 | Msa0184200:intron | 20.0% |
| !! | TAGAAGATAGTTAATTGTTA+TGG | - | chr1_4:73457962-73457981 | Msa0184200:intron | 20.0% |
| !! | AGAAGATAGTTAATTGTTAT+GGG | - | chr1_4:73457963-73457982 | Msa0184200:intron | 20.0% |
| !! | TGAAGGAATTAATAACATTA+AGG | - | chr1_4:73458186-73458205 | Msa0184200:CDS | 20.0% |
| !! | GAAGGAATTAATAACATTAA+GGG | - | chr1_4:73458187-73458206 | Msa0184200:CDS | 20.0% |
| !! | TTCTAAATGGAGTTTAATAA+AGG | + | chr1_4:73458309-73458328 | None:intergenic | 20.0% |
| !! | TTTATTAAACTCCATTTAGA+AGG | - | chr1_4:73458308-73458327 | Msa0184200:CDS | 20.0% |
| !!! | TACAATTTTTGTTTTGATTG+AGG | - | chr1_4:73458619-73458638 | Msa0184200:intron | 20.0% |
| !!! | TTAACAAAATGTCTTTTTAC+AGG | - | chr1_4:73458821-73458840 | Msa0184200:CDS | 20.0% |
| !! | GATACATATAATTAAGATCA+CGG | + | chr1_4:73459005-73459024 | None:intergenic | 20.0% |
| !! | TTCAAAATTCTCAAAACAAT+CGG | + | chr1_4:73459052-73459071 | None:intergenic | 20.0% |
| !!! | ATTTGGGAAATTTGAGATTT+TGG | + | chr1_4:73454427-73454446 | None:intergenic | 25.0% |
| ! | TTTGGCTAAATTGATTGATT+TGG | - | chr1_4:73455166-73455185 | Msa0184200:intron | 25.0% |
| !! | TTGGCTAAATTGATTGATTT+GGG | - | chr1_4:73455167-73455186 | Msa0184200:intron | 25.0% |
| ! | TTGATCGTCATATTCATATA+TGG | - | chr1_4:73455492-73455511 | Msa0184200:intron | 25.0% |
| ! | TGATCGTCATATTCATATAT+GGG | - | chr1_4:73455493-73455512 | Msa0184200:intron | 25.0% |
| ! | CAAAGTTTCAAAGAATGAAA+AGG | + | chr1_4:73455554-73455573 | None:intergenic | 25.0% |
| !!! | AAACTTTGAAATGAACAACA+AGG | - | chr1_4:73455566-73455585 | Msa0184200:intron | 25.0% |
| ! | AATGAACAACAAGGTTATAT+AGG | - | chr1_4:73455575-73455594 | Msa0184200:intron | 25.0% |
| ! | ATGAACAACAAGGTTATATA+GGG | - | chr1_4:73455576-73455595 | Msa0184200:intron | 25.0% |
| ! | CAATACTTAATACTTCACTT+TGG | + | chr1_4:73456154-73456173 | None:intergenic | 25.0% |
| ! | ATATACTTAAGACTTCATCT+TGG | + | chr1_4:73456248-73456267 | None:intergenic | 25.0% |
| ! | AAGATGAAGTCTTAAGTATA+TGG | - | chr1_4:73456247-73456266 | Msa0184200:intron | 25.0% |
| ! | CAAAACCATATTGTATATGT+CGG | - | chr1_4:73456273-73456292 | Msa0184200:intron | 25.0% |
| ! | AATTTCTTTCCTATCTTCAA+AGG | - | chr1_4:73456362-73456381 | Msa0184200:intron | 25.0% |
| ! | ATGTGTATTCTCTGTAATTT+AGG | - | chr1_4:73456445-73456464 | Msa0184200:intron | 25.0% |
| !!! | CTGTTGTTTTGTTAATAATG+AGG | - | chr1_4:73456520-73456539 | Msa0184200:CDS | 25.0% |
| !! | GTAGTATTTCACTATCTTTT+TGG | + | chr1_4:73456661-73456680 | None:intergenic | 25.0% |
| ! | CATAAGAAGTAAATTTCTGA+AGG | + | chr1_4:73456728-73456747 | None:intergenic | 25.0% |
| ! | ATATTGAGAAAAGTAAGCAA+AGG | + | chr1_4:73456769-73456788 | None:intergenic | 25.0% |
| ! | GTTATAGTTAGCATTATGTT+AGG | - | chr1_4:73456869-73456888 | Msa0184200:intron | 25.0% |
| !!! | GTAATGGTTTTGTTAGATTA+TGG | - | chr1_4:73457031-73457050 | Msa0184200:CDS | 25.0% |
| !!! | TTACTCTGTTTTTTCTTCTT+TGG | - | chr1_4:73457311-73457330 | Msa0184200:intron | 25.0% |
| !! | AATAGTGATTTTGTAGAGAA+TGG | - | chr1_4:73457453-73457472 | Msa0184200:CDS | 25.0% |
| !! | AAAGAAATAAAGAAGTGCAA+GGG | + | chr1_4:73457816-73457835 | None:intergenic | 25.0% |
| !! | AAAAGAAATAAAGAAGTGCA+AGG | + | chr1_4:73457817-73457836 | None:intergenic | 25.0% |
| !! | TTTTCTGTCAATAGAGTTTA+AGG | + | chr1_4:73457886-73457905 | None:intergenic | 25.0% |
| !!! | AACTATCTTCTAAAGTAGTT+CGG | + | chr1_4:73457954-73457973 | None:intergenic | 25.0% |
| !! | AACTAAATTTTCAGCGATTA+TGG | - | chr1_4:73458010-73458029 | Msa0184200:intron | 25.0% |
| !!! | TAAAGCAATAGAGTTTTTAG+GGG | + | chr1_4:73458076-73458095 | None:intergenic | 25.0% |
| !! | CTAAAGCAATAGAGTTTTTA+GGG | + | chr1_4:73458077-73458096 | None:intergenic | 25.0% |
| !!! | TCTAAAGCAATAGAGTTTTT+AGG | + | chr1_4:73458078-73458097 | None:intergenic | 25.0% |
| ! | ATGTTAAGTGATTAAAGTGA+AGG | - | chr1_4:73458169-73458188 | Msa0184200:CDS | 25.0% |
| !!! | AATGAAATTAGCCTTCTAAA+TGG | + | chr1_4:73458322-73458341 | None:intergenic | 25.0% |
| ! | TCAAAATTCTCAAAACAATC+GGG | + | chr1_4:73459051-73459070 | None:intergenic | 25.0% |
| ! | TTTTGATGAGACAAAGACAA+AGG | + | chr1_4:73454394-73454413 | None:intergenic | 30.0% |
| TGATTGAATTGTTAGGGTTA+GGG | + | chr1_4:73454458-73454477 | None:intergenic | 30.0% | |
| ATGATTGAATTGTTAGGGTT+AGG | + | chr1_4:73454459-73454478 | None:intergenic | 30.0% | |
| ! | TGATTTCAATGTAACCCTTT+TGG | - | chr1_4:73455044-73455063 | Msa0184200:intron | 30.0% |
| ! | TGATTTCAATGTGACTCTTT+TGG | - | chr1_4:73455148-73455167 | Msa0184200:intron | 30.0% |
| !! | TTGATTTGGGTGTGTTATTT+AGG | - | chr1_4:73455180-73455199 | Msa0184200:intron | 30.0% |
| !! | TGATTTGGGTGTGTTATTTA+GGG | - | chr1_4:73455181-73455200 | Msa0184200:intron | 30.0% |
| !! | TGTGTTATTTAGGGTTAAAC+TGG | - | chr1_4:73455190-73455209 | Msa0184200:intron | 30.0% |
| ! | TTATTTAGGGTTAAACTGGA+TGG | - | chr1_4:73455194-73455213 | Msa0184200:intron | 30.0% |
| TTTATCTGAGGATGATTCTA+AGG | - | chr1_4:73455271-73455290 | Msa0184200:intron | 30.0% | |
| TTATCTGAGGATGATTCTAA+GGG | - | chr1_4:73455272-73455291 | Msa0184200:intron | 30.0% | |
| !!! | AAGTAGACAGATTTTGACTT+TGG | - | chr1_4:73455430-73455449 | Msa0184200:intron | 30.0% |
| ! | CAAAAGTACAAGCCTATTTA+TGG | - | chr1_4:73455910-73455929 | Msa0184200:intron | 30.0% |
| TATTTATGGCCAAATCTGTA+GGG | - | chr1_4:73455924-73455943 | Msa0184200:intron | 30.0% | |
| ! | TTTTGTCCATTGTCTTTTAC+AGG | - | chr1_4:73455989-73456008 | Msa0184200:intron | 30.0% |
| TTGATCGAACGATTAAGATA+TGG | - | chr1_4:73456087-73456106 | Msa0184200:intron | 30.0% | |
| GATTAAGATATGGAATGTTG+AGG | - | chr1_4:73456097-73456116 | Msa0184200:intron | 30.0% | |
| ACTTACATGAATACTCTGTT+TGG | - | chr1_4:73456125-73456144 | Msa0184200:intron | 30.0% | |
| TACTTAATACTTCACTTTGG+TGG | + | chr1_4:73456151-73456170 | None:intergenic | 30.0% | |
| TTGATTGTTTACGCAAAGAA+AGG | - | chr1_4:73456171-73456190 | Msa0184200:intron | 30.0% | |
| TGATTGTTTACGCAAAGAAA+GGG | - | chr1_4:73456172-73456191 | Msa0184200:intron | 30.0% | |
| AACATCCGACATATACAATA+TGG | + | chr1_4:73456281-73456300 | None:intergenic | 30.0% | |
| ! | ATTTTCCAAAAACAGAGCAA+TGG | + | chr1_4:73456319-73456338 | None:intergenic | 30.0% |
| AACAAAACAACAGCATTCTA+AGG | + | chr1_4:73456513-73456532 | None:intergenic | 30.0% | |
| AATAATGAGGAATTCTTGTC+TGG | - | chr1_4:73456533-73456552 | Msa0184200:CDS | 30.0% | |
| ! | AGAAGCCTATTCATATTTTG+AGG | - | chr1_4:73456597-73456616 | Msa0184200:CDS | 30.0% |
| GCATTCCTCAAAATATGAAT+AGG | + | chr1_4:73456605-73456624 | None:intergenic | 30.0% | |
| CAGTATTTAAAGGTTTACCT+AGG | + | chr1_4:73456694-73456713 | None:intergenic | 30.0% | |
| TTTCTGCATAGTGAAGATAA+TGG | + | chr1_4:73456909-73456928 | None:intergenic | 30.0% | |
| TATCTTCACTATGCAGAAAA+TGG | - | chr1_4:73456910-73456929 | Msa0184200:CDS | 30.0% | |
| ATTGGATTCATATTCATGCT+TGG | - | chr1_4:73457140-73457159 | Msa0184200:intron | 30.0% | |
| ! | AAATCTTTTGTATCACAGGT+TGG | - | chr1_4:73457199-73457218 | Msa0184200:intron | 30.0% |
| ! | AATCTTTTGTATCACAGGTT+GGG | - | chr1_4:73457200-73457219 | Msa0184200:intron | 30.0% |
| !!! | CTTTTTCAAGGAGAATAAGT+GGG | - | chr1_4:73457544-73457563 | Msa0184200:CDS | 30.0% |
| !!! | TTTTTCAAGGAGAATAAGTG+GGG | - | chr1_4:73457545-73457564 | Msa0184200:CDS | 30.0% |
| ACATGCATTATTATATGCAG+GGG | + | chr1_4:73457592-73457611 | None:intergenic | 30.0% | |
| GACATGCATTATTATATGCA+GGG | + | chr1_4:73457593-73457612 | None:intergenic | 30.0% | |
| ! | GAGAGTATGATAACATAGAT+TGG | - | chr1_4:73457659-73457678 | Msa0184200:intron | 30.0% |
| ! | ATTGTATTGTAGAAGGGTTT+TGG | + | chr1_4:73457709-73457728 | None:intergenic | 30.0% |
| !!! | TTTTTAGTTTCCCCATTTTG+AGG | - | chr1_4:73457729-73457748 | Msa0184200:intron | 30.0% |
| !!! | TTTTAGTTTCCCCATTTTGA+GGG | - | chr1_4:73457730-73457749 | Msa0184200:intron | 30.0% |
| ATACAAAATCCCCTCAAAAT+GGG | + | chr1_4:73457743-73457762 | None:intergenic | 30.0% | |
| AATACAAAATCCCCTCAAAA+TGG | + | chr1_4:73457744-73457763 | None:intergenic | 30.0% | |
| ! | TTATGGAATTTTGTGTTCTC+TGG | - | chr1_4:73458027-73458046 | Msa0184200:intron | 30.0% |
| !! | AAAGCAATAGAGTTTTTAGG+GGG | + | chr1_4:73458075-73458094 | None:intergenic | 30.0% |
| TTAATAACATTAAGGGTCTC+AGG | - | chr1_4:73458194-73458213 | Msa0184200:CDS | 30.0% | |
| !!! | ATTTTGGGATTTAATTGTGG+TGG | + | chr1_4:73458261-73458280 | None:intergenic | 30.0% |
| ACCACAATTAAATCCCAAAA+TGG | - | chr1_4:73458260-73458279 | Msa0184200:CDS | 30.0% | |
| !!! | TCCATTTTGGGATTTAATTG+TGG | + | chr1_4:73458264-73458283 | None:intergenic | 30.0% |
| TCAAACAATTTGATCGTCAA+TGG | + | chr1_4:73458476-73458495 | None:intergenic | 30.0% | |
| AAGGTTAAAAGCAAGAGTTA+GGG | + | chr1_4:73458530-73458549 | None:intergenic | 30.0% | |
| TAAGGTTAAAAGCAAGAGTT+AGG | + | chr1_4:73458531-73458550 | None:intergenic | 30.0% | |
| GATTTACAGAAAGGATGTTT+AGG | - | chr1_4:73458579-73458598 | Msa0184200:intron | 30.0% | |
| TCTCATGATGACAATTTAAG+TGG | + | chr1_4:73458906-73458925 | None:intergenic | 30.0% | |
| GCAATTAGTCAAAATTGAAG+AGG | + | chr1_4:73458950-73458969 | None:intergenic | 30.0% | |
| ! | GAATTTTGAATCATGATACG+AGG | - | chr1_4:73459062-73459081 | Msa0184200:CDS | 30.0% |
| TTGTAGACATTTGTTCACTT+AGG | - | chr1_4:73459156-73459175 | Msa0184200:five_prime_UTR | 30.0% | |
| !! | GATAGTGATTTTGACGAAGA+TGG | - | chr1_4:73454591-73454610 | Msa0184200:three_prime_UTR | 35.0% |
| GGAAGTTTAAAGATAGTGCT+AGG | - | chr1_4:73454703-73454722 | Msa0184200:CDS | 35.0% | |
| CAAAGAGATGAAGATGATGA+TGG | - | chr1_4:73454738-73454757 | Msa0184200:intron | 35.0% | |
| ! | TGATGATGATGATGAAGATG+AGG | - | chr1_4:73454764-73454783 | Msa0184200:intron | 35.0% |
| ! | ATGATGATGAAGATGAGGAT+GGG | - | chr1_4:73454769-73454788 | Msa0184200:intron | 35.0% |
| TCAGAAAAGCTATTGCTTCA+AGG | - | chr1_4:73454850-73454869 | Msa0184200:intron | 35.0% | |
| ! | TGATTTCAATGTGACCCTTT+TGG | - | chr1_4:73454986-73455005 | Msa0184200:intron | 35.0% |
| !!! | AATGGGTTGTTTGACACTTT+TGG | - | chr1_4:73455087-73455106 | Msa0184200:intron | 35.0% |
| ! | GCATAAACAATGTGTTACTG+CGG | - | chr1_4:73455244-73455263 | Msa0184200:intron | 35.0% |
| TATCTGAGGATGATTCTAAG+GGG | - | chr1_4:73455273-73455292 | Msa0184200:intron | 35.0% | |
| !!! | TGTTGGATATTTTTTTGGGG+TGG | - | chr1_4:73455619-73455638 | Msa0184200:intron | 35.0% |
| GAATAGATTAGTACAGCTCT+AGG | - | chr1_4:73455641-73455660 | Msa0184200:intron | 35.0% | |
| TTATACTCCTTTCCCTTGTT+TGG | - | chr1_4:73455709-73455728 | Msa0184200:intron | 35.0% | |
| CTACAGATTTGGCCATAAAT+AGG | + | chr1_4:73455925-73455944 | None:intergenic | 35.0% | |
| CTATTTATGGCCAAATCTGT+AGG | - | chr1_4:73455923-73455942 | Msa0184200:intron | 35.0% | |
| !! | TAGTTGGGACTTGTTATTGT+TGG | - | chr1_4:73455959-73455978 | Msa0184200:intron | 35.0% |
| GAAAAGCCTGTAAAAGACAA+TGG | + | chr1_4:73455998-73456017 | None:intergenic | 35.0% | |
| !!! | TGTTTCTTCTCTGGCTTTTA+GGG | - | chr1_4:73456034-73456053 | Msa0184200:intron | 35.0% |
| AAACGATCCAGAAAATAGCT+CGG | + | chr1_4:73456069-73456088 | None:intergenic | 35.0% | |
| !! | AAAGAAAGGGTATTATCTGC+TGG | - | chr1_4:73456185-73456204 | Msa0184200:intron | 35.0% |
| TCGTAGTATGCAGTTGTTTA+AGG | - | chr1_4:73456214-73456233 | Msa0184200:intron | 35.0% | |
| ! | AAGAAACAGCCTTTGAAGAT+AGG | + | chr1_4:73456374-73456393 | None:intergenic | 35.0% |
| !! | TATCTTCAAAGGCTGTTTCT+TGG | - | chr1_4:73456373-73456392 | Msa0184200:intron | 35.0% |
| !! | ATCTTCAAAGGCTGTTTCTT+GGG | - | chr1_4:73456374-73456393 | Msa0184200:intron | 35.0% |
| GAAAAAGTCTCATGAGGAAA+TGG | + | chr1_4:73456412-73456431 | None:intergenic | 35.0% | |
| CATTCAGAAAAAGTCTCATG+AGG | + | chr1_4:73456418-73456437 | None:intergenic | 35.0% | |
| GATAGTGAAATACTACCCAA+CGG | - | chr1_4:73456665-73456684 | Msa0184200:intron | 35.0% | |
| ATGAAGCGGTTTAATGTCTT+TGG | + | chr1_4:73457073-73457092 | None:intergenic | 35.0% | |
| ATTGCAGTTGGAAATTTCAC+TGG | - | chr1_4:73457168-73457187 | Msa0184200:intron | 35.0% | |
| !! | GCTAGAATTCACCTTTTTCA+AGG | - | chr1_4:73457532-73457551 | Msa0184200:CDS | 35.0% |
| CCACTTATTCTCCTTGAAAA+AGG | + | chr1_4:73457546-73457565 | None:intergenic | 35.0% | |
| !!! | CCTTTTTCAAGGAGAATAAG+TGG | - | chr1_4:73457543-73457562 | Msa0184200:CDS | 35.0% |
| GGACATGCATTATTATATGC+AGG | + | chr1_4:73457594-73457613 | None:intergenic | 35.0% | |
| !!! | TATTGTAGAAGGGTTTTGGA+GGG | + | chr1_4:73457705-73457724 | None:intergenic | 35.0% |
| !! | TTTAGTTTCCCCATTTTGAG+GGG | - | chr1_4:73457731-73457750 | Msa0184200:intron | 35.0% |
| TACAAAATCCCCTCAAAATG+GGG | + | chr1_4:73457742-73457761 | None:intergenic | 35.0% | |
| !!! | TTTTAGGGGGTAAGAGTATT+AGG | + | chr1_4:73458062-73458081 | None:intergenic | 35.0% |
| TTAGAGTGCATTTGATAGAG+TGG | - | chr1_4:73458093-73458112 | Msa0184200:CDS | 35.0% | |
| ! | GCTGTAGCAATATCCATTTT+GGG | + | chr1_4:73458276-73458295 | None:intergenic | 35.0% |
| CAAAATGGATATTGCTACAG+CGG | - | chr1_4:73458275-73458294 | Msa0184200:CDS | 35.0% | |
| ACAAGTCTACTTCGTATAAC+TGG | + | chr1_4:73458365-73458384 | None:intergenic | 35.0% | |
| TGAATAATTGCAGCTGTTGT+TGG | - | chr1_4:73458439-73458458 | Msa0184200:intron | 35.0% | |
| ! | TTTGACTTCAGCTATGCTTA+AGG | + | chr1_4:73458549-73458568 | None:intergenic | 35.0% |
| CATAGCTGAAGTCAAATGTT+GGG | - | chr1_4:73458553-73458572 | Msa0184200:intron | 35.0% | |
| !! | ACGTTCATTAGTTTGTTGTC+TGG | - | chr1_4:73458689-73458708 | Msa0184200:intron | 35.0% |
| ! | TCAAGTGAGATGATTGATTC+AGG | + | chr1_4:73458722-73458741 | None:intergenic | 35.0% |
| AACTAACAGCTTTGCATAAG+TGG | - | chr1_4:73458761-73458780 | Msa0184200:CDS | 35.0% | |
| AATTGTCATCATGAGATCTG+AGG | - | chr1_4:73458910-73458929 | Msa0184200:CDS | 35.0% | |
| AAAGACAAAGGTTGCAGCTA+GGG | + | chr1_4:73454382-73454401 | None:intergenic | 40.0% | |
| GGTTAGGGTTTCAGAGATTT+GGG | + | chr1_4:73454443-73454462 | None:intergenic | 40.0% | |
| CGGGCATGATTGAATTGTTA+GGG | + | chr1_4:73454464-73454483 | None:intergenic | 40.0% | |
| CTCAGCATCTTGATCTTCAT+CGG | + | chr1_4:73454562-73454581 | None:intergenic | 40.0% | |
| !!! | GATGGTTTTGTTCCATCGAA+AGG | - | chr1_4:73454609-73454628 | Msa0184200:three_prime_UTR | 40.0% |
| TTTGTTCCATCGAAAGGTGA+AGG | - | chr1_4:73454615-73454634 | Msa0184200:three_prime_UTR | 40.0% | |
| TTGTTCCATCGAAAGGTGAA+GGG | - | chr1_4:73454616-73454635 | Msa0184200:three_prime_UTR | 40.0% | |
| ! | GATGATGATGAAGATGAGGA+TGG | - | chr1_4:73454768-73454787 | Msa0184200:intron | 40.0% |
| ! | TGATGATGAAGATGAGGATG+GGG | - | chr1_4:73454770-73454789 | Msa0184200:intron | 40.0% |
| GCTATCGACGAAGATGATAA+AGG | - | chr1_4:73454803-73454822 | Msa0184200:intron | 40.0% | |
| ! | TAAACAATGTGTTACTGCGG+TGG | - | chr1_4:73455247-73455266 | Msa0184200:intron | 40.0% |
| !! | AAGATGGAAGCATTGTGCAA+TGG | - | chr1_4:73455309-73455328 | Msa0184200:intron | 40.0% |
| !! | AGATGGAAGCATTGTGCAAT+GGG | - | chr1_4:73455310-73455329 | Msa0184200:intron | 40.0% |
| ! | GGAAATGTGAGAGGTATAAG+TGG | - | chr1_4:73455345-73455364 | Msa0184200:intron | 40.0% |
| ! | GTATAAGTGGCCCATTGATT+CGG | - | chr1_4:73455358-73455377 | Msa0184200:intron | 40.0% |
| GACTTCAGAACCGAATCAAT+GGG | + | chr1_4:73455371-73455390 | None:intergenic | 40.0% | |
| AAGTTCAGATGGTCGCTATT+TGG | - | chr1_4:73455457-73455476 | Msa0184200:intron | 40.0% | |
| AACGTTACCAAACAAGGGAA+AGG | + | chr1_4:73455719-73455738 | None:intergenic | 40.0% | |
| GAACGAACGTTACCAAACAA+GGG | + | chr1_4:73455724-73455743 | None:intergenic | 40.0% | |
| AGAACGAACGTTACCAAACA+AGG | + | chr1_4:73455725-73455744 | None:intergenic | 40.0% | |
| AGTCCAATACCCTACAGATT+TGG | + | chr1_4:73455936-73455955 | None:intergenic | 40.0% | |
| !! | AGGGTATTGGACTGTTTAGT+TGG | - | chr1_4:73455943-73455962 | Msa0184200:intron | 40.0% |
| !! | GGGTATTGGACTGTTTAGTT+GGG | - | chr1_4:73455944-73455963 | Msa0184200:intron | 40.0% |
| ! | TGTCTTTTACAGGCTTTTCC+TGG | - | chr1_4:73455999-73456018 | Msa0184200:intron | 40.0% |
| CTAAAAGCCAGAGAAGAAAC+AGG | + | chr1_4:73456035-73456054 | None:intergenic | 40.0% | |
| !!! | CTGTTTCTTCTCTGGCTTTT+AGG | - | chr1_4:73456033-73456052 | Msa0184200:intron | 40.0% |
| ACAACTGCATACTACGATCA+CGG | + | chr1_4:73456211-73456230 | None:intergenic | 40.0% | |
| TCCAAAAACAGAGCAATGGT+GGG | + | chr1_4:73456315-73456334 | None:intergenic | 40.0% | |
| TTCCAAAAACAGAGCAATGG+TGG | + | chr1_4:73456316-73456335 | None:intergenic | 40.0% | |
| TGAGGAATTCTTGTCTGGTT+CGG | - | chr1_4:73456538-73456557 | Msa0184200:CDS | 40.0% | |
| ! | ATGATGGTAGCATTGAGCTT+TGG | - | chr1_4:73456561-73456580 | Msa0184200:CDS | 40.0% |
| ! | TGATGGTAGCATTGAGCTTT+GGG | - | chr1_4:73456562-73456581 | Msa0184200:CDS | 40.0% |
| TGACGAACAATGGTGATTCT+CGG | + | chr1_4:73456947-73456966 | None:intergenic | 40.0% | |
| ! | AAGAGTGTACTGACGAACAA+TGG | + | chr1_4:73456957-73456976 | None:intergenic | 40.0% |
| ATTGTTCGTCAGTACACTCT+TGG | - | chr1_4:73456956-73456975 | Msa0184200:CDS | 40.0% | |
| TTGTTCGTCAGTACACTCTT+GGG | - | chr1_4:73456957-73456976 | Msa0184200:CDS | 40.0% | |
| ACCAACGGTACATTATGAAG+CGG | + | chr1_4:73457087-73457106 | None:intergenic | 40.0% | |
| ! | ATGTACCGTTGGTAAGTAGA+AGG | - | chr1_4:73457094-73457113 | Msa0184200:CDS | 40.0% |
| GCTATCCTTCTACTTACCAA+CGG | + | chr1_4:73457102-73457121 | None:intergenic | 40.0% | |
| GGTTGGGTTTGTCAATTCTT+TGG | - | chr1_4:73457216-73457235 | Msa0184200:intron | 40.0% | |
| TCAGCAAAATTCCTAGTTGC+TGG | - | chr1_4:73457250-73457269 | Msa0184200:intron | 40.0% | |
| AAATTCCTAGTTGCTGGAGT+TGG | - | chr1_4:73457256-73457275 | Msa0184200:intron | 40.0% | |
| AATTCCTAGTTGCTGGAGTT+GGG | - | chr1_4:73457257-73457276 | Msa0184200:intron | 40.0% | |
| !! | TTTCTCTTTGGCTCTGCTTA+CGG | - | chr1_4:73457351-73457370 | Msa0184200:CDS | 40.0% |
| !! | TTTTTGGTCAAGTAGCCTAG+TGG | - | chr1_4:73457510-73457529 | Msa0184200:CDS | 40.0% |
| AAAGGTGAATTCTAGCCACT+AGG | + | chr1_4:73457528-73457547 | None:intergenic | 40.0% | |
| !! | GTATTGTAGAAGGGTTTTGG+AGG | + | chr1_4:73457706-73457725 | None:intergenic | 40.0% |
| ! | AAAGAAGTGCAAGGGATGAA+GGG | + | chr1_4:73457808-73457827 | None:intergenic | 40.0% |
| ! | TAAAGAAGTGCAAGGGATGA+AGG | + | chr1_4:73457809-73457828 | None:intergenic | 40.0% |
| TTTGCAAGTTTAGAGGGGAA+GGG | + | chr1_4:73457858-73457877 | None:intergenic | 40.0% | |
| CTCTGTTTGCAAGTTTAGAG+GGG | + | chr1_4:73457863-73457882 | None:intergenic | 40.0% | |
| GCTCTGTTTGCAAGTTTAGA+GGG | + | chr1_4:73457864-73457883 | None:intergenic | 40.0% | |
| ! | CGCTGTAGCAATATCCATTT+TGG | + | chr1_4:73458277-73458296 | None:intergenic | 40.0% |
| AAAGCAAGAGTTAGGGTTGA+CGG | + | chr1_4:73458523-73458542 | None:intergenic | 40.0% | |
| GCATAGCTGAAGTCAAATGT+TGG | - | chr1_4:73458552-73458571 | Msa0184200:intron | 40.0% | |
| GTTGGGAGTGATTTACAGAA+AGG | - | chr1_4:73458570-73458589 | Msa0184200:intron | 40.0% | |
| ! | TTTTTACAGGAACCTCGTCT+AGG | - | chr1_4:73458834-73458853 | Msa0184200:CDS | 40.0% |
| AGAATACGTGAAGCTCGTAA+TGG | - | chr1_4:73458867-73458886 | Msa0184200:CDS | 40.0% | |
| TCCTACGTTGAAAAGACTTG+AGG | - | chr1_4:73459086-73459105 | Msa0184200:CDS | 40.0% | |
| ! | TCCTCAAGTCTTTTCAACGT+AGG | + | chr1_4:73459090-73459109 | None:intergenic | 40.0% |
| CAAAGACAAAGGTTGCAGCT+AGG | + | chr1_4:73454383-73454402 | None:intergenic | 45.0% | |
| GGGTTAGGGTTTCAGAGATT+TGG | + | chr1_4:73454444-73454463 | None:intergenic | 45.0% | |
| GCGGGCATGATTGAATTGTT+AGG | + | chr1_4:73454465-73454484 | None:intergenic | 45.0% | |
| TTCTTGCGGTTGTTCTTTGC+GGG | + | chr1_4:73454483-73454502 | None:intergenic | 45.0% | |
| CTTCTTGCGGTTGTTCTTTG+CGG | + | chr1_4:73454484-73454503 | None:intergenic | 45.0% | |
| AGCATCTTGATCTTCATCGG+CGG | + | chr1_4:73454559-73454578 | None:intergenic | 45.0% | |
| TGTTCCATCGAAAGGTGAAG+GGG | - | chr1_4:73454617-73454636 | Msa0184200:three_prime_UTR | 45.0% | |
| AGGAAACTACAGCTGAAGCT+AGG | - | chr1_4:73454655-73454674 | Msa0184200:exon | 45.0% | |
| !! | GAGTAGCTGAGGAGTATTTG+AGG | - | chr1_4:73454682-73454701 | Msa0184200:CDS | 45.0% |
| AGATAGTGCTAGGAGAGAGA+AGG | - | chr1_4:73454713-73454732 | Msa0184200:CDS | 45.0% | |
| GATGATAAAGGAGCAGCAAG+AGG | - | chr1_4:73454815-73454834 | Msa0184200:intron | 45.0% | |
| AGGGTTAAACTGGATGGTCA+TGG | - | chr1_4:73455200-73455219 | Msa0184200:intron | 45.0% | |
| GTTAAACTGGATGGTCATGG+TGG | - | chr1_4:73455203-73455222 | Msa0184200:intron | 45.0% | |
| ! | GGGTTTTCAGCTTCGAAAGA+TGG | - | chr1_4:73455293-73455312 | Msa0184200:intron | 45.0% |
| TGCAATGGGATGTTGAGAGT+GGG | - | chr1_4:73455324-73455343 | Msa0184200:intron | 45.0% | |
| TTGAGAGTGGGAAATGTGAG+AGG | - | chr1_4:73455336-73455355 | Msa0184200:intron | 45.0% | |
| GGACTTCAGAACCGAATCAA+TGG | + | chr1_4:73455372-73455391 | None:intergenic | 45.0% | |
| TTGAGGATCCTTCAAGCCAT+GGG | + | chr1_4:73455393-73455412 | None:intergenic | 45.0% | |
| TGCTTTGTAGCAGAACCTTG+AGG | + | chr1_4:73455410-73455429 | None:intergenic | 45.0% | |
| ACTTTGGCTGCAAGTTCAGA+TGG | - | chr1_4:73455446-73455465 | Msa0184200:intron | 45.0% | |
| ATGGTCGCTATTTGGCAACT+GGG | - | chr1_4:73455465-73455484 | Msa0184200:intron | 45.0% | |
| ATATATGGGATACGCGCACT+AGG | - | chr1_4:73455507-73455526 | Msa0184200:intron | 45.0% | |
| TATATGGGATACGCGCACTA+GGG | - | chr1_4:73455508-73455527 | Msa0184200:intron | 45.0% | |
| TGGCCAAATCTGTAGGGTAT+TGG | - | chr1_4:73455930-73455949 | Msa0184200:intron | 45.0% | |
| ! | TAGAGGTCCTGTTTCTTCTC+TGG | - | chr1_4:73456025-73456044 | Msa0184200:intron | 45.0% |
| !!! | TCTTCTCTGGCTTTTAGGGA+AGG | - | chr1_4:73456038-73456057 | Msa0184200:intron | 45.0% |
| !!! | GGAAGTACCGAGCTATTTTC+TGG | - | chr1_4:73456059-73456078 | Msa0184200:intron | 45.0% |
| ! | TCCCACCATTGCTCTGTTTT+TGG | - | chr1_4:73456311-73456330 | Msa0184200:CDS | 45.0% |
| ! | CAGCATTCTAAGGAAGATGC+AGG | + | chr1_4:73456503-73456522 | None:intergenic | 45.0% |
| !! | TTCTTGTCTGGTTCGGATGA+TGG | - | chr1_4:73456545-73456564 | Msa0184200:CDS | 45.0% |
| ! | GATGGTAGCATTGAGCTTTG+GGG | - | chr1_4:73456563-73456582 | Msa0184200:CDS | 45.0% |
| ATACTACCCAACGGTAACCT+AGG | - | chr1_4:73456674-73456693 | Msa0184200:intron | 45.0% | |
| GGTTTACCTAGGTTACCGTT+GGG | + | chr1_4:73456683-73456702 | None:intergenic | 45.0% | |
| AGGTTTACCTAGGTTACCGT+TGG | + | chr1_4:73456684-73456703 | None:intergenic | 45.0% | |
| AACAATGGTGATTCTCGGGA+TGG | + | chr1_4:73456942-73456961 | None:intergenic | 45.0% | |
| GACGAACAATGGTGATTCTC+GGG | + | chr1_4:73456946-73456965 | None:intergenic | 45.0% | |
| AAGGTCACTGTTCCTACAGA+CGG | + | chr1_4:73456995-73457014 | None:intergenic | 45.0% | |
| ACCGCTTCATAATGTACCGT+TGG | - | chr1_4:73457083-73457102 | Msa0184200:CDS | 45.0% | |
| TGCTTGGCTGTAATTGCAGT+TGG | - | chr1_4:73457156-73457175 | Msa0184200:intron | 45.0% | |
| !! | TTCTCTTTGGCTCTGCTTAC+GGG | - | chr1_4:73457352-73457371 | Msa0184200:CDS | 45.0% |
| ATTATTATATGCAGGGGCCG+GGG | + | chr1_4:73457586-73457605 | None:intergenic | 45.0% | |
| CATTATTATATGCAGGGGCC+GGG | + | chr1_4:73457587-73457606 | None:intergenic | 45.0% | |
| GCATTATTATATGCAGGGGC+CGG | + | chr1_4:73457588-73457607 | None:intergenic | 45.0% | |
| ! | TGCAAGGGATGAAGGGTTTT+GGG | + | chr1_4:73457801-73457820 | None:intergenic | 45.0% |
| AGTTTAGAGGGGAAGGGATA+GGG | + | chr1_4:73457852-73457871 | None:intergenic | 45.0% | |
| AAGTTTAGAGGGGAAGGGAT+AGG | + | chr1_4:73457853-73457872 | None:intergenic | 45.0% | |
| GTTTGCAAGTTTAGAGGGGA+AGG | + | chr1_4:73457859-73457878 | None:intergenic | 45.0% | |
| GGCTCTGTTTGCAAGTTTAG+AGG | + | chr1_4:73457865-73457884 | None:intergenic | 45.0% | |
| AAGGGTCTCAGGTCTAGATT+TGG | - | chr1_4:73458205-73458224 | Msa0184200:CDS | 45.0% | |
| CACTCACTCAGTTAGGTTTC+AGG | - | chr1_4:73458231-73458250 | Msa0184200:CDS | 45.0% | |
| TAGGCATCTATGAGTAAGCG+AGG | - | chr1_4:73459175-73459194 | Msa0184200:five_prime_UTR | 45.0% | |
| TCTATGAGTAAGCGAGGCTT+TGG | - | chr1_4:73459181-73459200 | Msa0184200:five_prime_UTR | 45.0% | |
| !!! | TCAATATATATTTTTTTTTT+TGG | - | chr1_4:73457494-73457513 | Msa0184200:CDS | 5.0% |
| GGTCGCGTGAATTCTTCTTG+CGG | + | chr1_4:73454497-73454516 | None:intergenic | 50.0% | |
| !! | GCGACCCATTTTTCGACGAT+GGG | - | chr1_4:73454511-73454530 | Msa0184200:three_prime_UTR | 50.0% |
| TGGGCCCATCGTCGAAAAAT+GGG | + | chr1_4:73454518-73454537 | None:intergenic | 50.0% | |
| TGTTCCCCTTCACCTTTCGA+TGG | + | chr1_4:73454624-73454643 | None:intergenic | 50.0% | |
| ATCGAAAGGTGAAGGGGAAC+AGG | - | chr1_4:73454623-73454642 | Msa0184200:three_prime_UTR | 50.0% | |
| AGCTAGGAAGAGAGTAGCTG+AGG | - | chr1_4:73454671-73454690 | Msa0184200:CDS | 50.0% | |
| ATGAAGATGAGGATGGGGCA+AGG | - | chr1_4:73454775-73454794 | Msa0184200:intron | 50.0% | |
| TGAAGATGAGGATGGGGCAA+GGG | - | chr1_4:73454776-73454795 | Msa0184200:intron | 50.0% | |
| !! | TACTGCGGTGGCTTTATCTG+AGG | - | chr1_4:73455259-73455278 | Msa0184200:intron | 50.0% |
| GTGCAATGGGATGTTGAGAG+TGG | - | chr1_4:73455323-73455342 | Msa0184200:intron | 50.0% | |
| !! | GATTCGGTTCTGAAGTCCCA+TGG | - | chr1_4:73455374-73455393 | Msa0184200:intron | 50.0% |
| ! | TCTGAAGTCCCATGGCTTGA+AGG | - | chr1_4:73455382-73455401 | Msa0184200:intron | 50.0% |
| CTTGAGGATCCTTCAAGCCA+TGG | + | chr1_4:73455394-73455413 | None:intergenic | 50.0% | |
| CATGGCTTGAAGGATCCTCA+AGG | - | chr1_4:73455392-73455411 | Msa0184200:intron | 50.0% | |
| GATGGTCGCTATTTGGCAAC+TGG | - | chr1_4:73455464-73455483 | Msa0184200:intron | 50.0% | |
| TGGTCGCTATTTGGCAACTG+GGG | - | chr1_4:73455466-73455485 | Msa0184200:intron | 50.0% | |
| ! | CAGGCTTTTCCTGGTCATAG+AGG | - | chr1_4:73456008-73456027 | Msa0184200:intron | 50.0% |
| GAAACAGGACCTCTATGACC+AGG | + | chr1_4:73456020-73456039 | None:intergenic | 50.0% | |
| AATGGTGATTCTCGGGATGG+TGG | + | chr1_4:73456939-73456958 | None:intergenic | 50.0% | |
| !! | TTTGGCTCTGCTTACGGGTT+CGG | - | chr1_4:73457357-73457376 | Msa0184200:CDS | 50.0% |
| ! | AGGAGAATAAGTGGGGTGTC+CGG | - | chr1_4:73457552-73457571 | Msa0184200:CDS | 50.0% |
| TGAGCATAGCTCAGTTGGGA+GGG | + | chr1_4:73457615-73457634 | None:intergenic | 50.0% | |
| TCCCAACTGAGCTATGCTCA+CGG | - | chr1_4:73457615-73457634 | Msa0184200:intron | 50.0% | |
| !!! | AGGGATGAAGGGTTTTGGGA+GGG | + | chr1_4:73457797-73457816 | None:intergenic | 50.0% |
| !!! | AAGGGATGAAGGGTTTTGGG+AGG | + | chr1_4:73457798-73457817 | None:intergenic | 50.0% |
| ! | GTGCAAGGGATGAAGGGTTT+TGG | + | chr1_4:73457802-73457821 | None:intergenic | 50.0% |
| GAAGGGATAGGGAGAGCTTT+GGG | + | chr1_4:73457841-73457860 | None:intergenic | 50.0% | |
| TTGGCTGCACTCACTCAGTT+AGG | - | chr1_4:73458224-73458243 | Msa0184200:CDS | 50.0% | |
| GATATTGCTACAGCGGCTGA+CGG | - | chr1_4:73458282-73458301 | Msa0184200:CDS | 50.0% | |
| TACAGGAACCTCGTCTAGGA+AGG | - | chr1_4:73458838-73458857 | Msa0184200:CDS | 50.0% | |
| !! | CGCGACCCATTTTTCGACGA+TGG | - | chr1_4:73454510-73454529 | Msa0184200:three_prime_UTR | 55.0% |
| GTGGGCCCATCGTCGAAAAA+TGG | + | chr1_4:73454519-73454538 | None:intergenic | 55.0% | |
| AGGGGAACAGGAGTCTGAAG+AGG | - | chr1_4:73454635-73454654 | Msa0184200:three_prime_UTR | 55.0% | |
| AAGGAGCAGCAAGAGGAGAG+TGG | - | chr1_4:73454822-73454841 | Msa0184200:intron | 55.0% | |
| GGTCGCTATTTGGCAACTGG+GGG | - | chr1_4:73455467-73455486 | Msa0184200:intron | 55.0% | |
| TCAGTGCAGTGACCGTCTGT+AGG | - | chr1_4:73456980-73456999 | Msa0184200:CDS | 55.0% | |
| AACAGTGACCTTGCCGCATC+TGG | - | chr1_4:73457003-73457022 | Msa0184200:CDS | 55.0% | |
| ACCATTACCCGCACCAGATG+CGG | + | chr1_4:73457019-73457038 | None:intergenic | 55.0% | |
| TGCTTACGGGTTCGGAGAGA+AGG | - | chr1_4:73457365-73457384 | Msa0184200:CDS | 55.0% | |
| GCTTACGGGTTCGGAGAGAA+GGG | - | chr1_4:73457366-73457385 | Msa0184200:CDS | 55.0% | |
| CTTACGGGTTCGGAGAGAAG+GGG | - | chr1_4:73457367-73457386 | Msa0184200:CDS | 55.0% | |
| TTTGGGGGGATGGGAGTAGA+GGG | - | chr1_4:73457400-73457419 | Msa0184200:CDS | 55.0% | |
| ! | GGAGAATAAGTGGGGTGTCC+GGG | - | chr1_4:73457553-73457572 | Msa0184200:CDS | 55.0% |
| ! | GAGAATAAGTGGGGTGTCCG+GGG | - | chr1_4:73457554-73457573 | Msa0184200:CDS | 55.0% |
| GTGAGCATAGCTCAGTTGGG+AGG | + | chr1_4:73457616-73457635 | None:intergenic | 55.0% | |
| CCCGTGAGCATAGCTCAGTT+GGG | + | chr1_4:73457619-73457638 | None:intergenic | 55.0% | |
| CCCAACTGAGCTATGCTCAC+GGG | - | chr1_4:73457616-73457635 | Msa0184200:intron | 55.0% | |
| CCAACTGAGCTATGCTCACG+GGG | - | chr1_4:73457617-73457636 | Msa0184200:intron | 55.0% | |
| !! | TTGGGAGGGGATGGCTTTGA+GGG | + | chr1_4:73457783-73457802 | None:intergenic | 55.0% |
| ! | TTTGGGAGGGGATGGCTTTG+AGG | + | chr1_4:73457784-73457803 | None:intergenic | 55.0% |
| !!! | TGAAGGGTTTTGGGAGGGGA+TGG | + | chr1_4:73457792-73457811 | None:intergenic | 55.0% |
| !!! | GGGATGAAGGGTTTTGGGAG+GGG | + | chr1_4:73457796-73457815 | None:intergenic | 55.0% |
| GGAAGGGATAGGGAGAGCTT+TGG | + | chr1_4:73457842-73457861 | None:intergenic | 55.0% | |
| AGGAACCTCGTCTAGGAAGG+TGG | - | chr1_4:73458841-73458860 | Msa0184200:CDS | 55.0% | |
| GGAACCTCGTCTAGGAAGGT+GGG | - | chr1_4:73458842-73458861 | Msa0184200:CDS | 55.0% | |
| GAACCTCGTCTAGGAAGGTG+GGG | - | chr1_4:73458843-73458862 | Msa0184200:CDS | 55.0% | |
| GCTACTCTGCGGCGTTTGGT+GGG | + | chr1_4:73454537-73454556 | None:intergenic | 60.0% | |
| CTTCATCGGCGGCTACTCTG+CGG | + | chr1_4:73454548-73454567 | None:intergenic | 60.0% | |
| !! | GCGCACTAGGGAGCATCTTC+AGG | - | chr1_4:73455520-73455539 | Msa0184200:intron | 60.0% |
| TGACCTTGCCGCATCTGGTG+CGG | - | chr1_4:73457008-73457027 | Msa0184200:CDS | 60.0% | |
| CCTGCCCAACTCCAGCAACT+AGG | + | chr1_4:73457264-73457283 | None:intergenic | 60.0% | |
| CCTAGTTGCTGGAGTTGGGC+AGG | - | chr1_4:73457261-73457280 | Msa0184200:intron | 60.0% | |
| AGAAGGGGAGGGGAAGGCTT+TGG | - | chr1_4:73457382-73457401 | Msa0184200:CDS | 60.0% | |
| GAAGGGGAGGGGAAGGCTTT+GGG | - | chr1_4:73457383-73457402 | Msa0184200:CDS | 60.0% | |
| AAGGGGAGGGGAAGGCTTTG+GGG | - | chr1_4:73457384-73457403 | Msa0184200:CDS | 60.0% | |
| ! | CTTTGGGGGGATGGGAGTAG+AGG | - | chr1_4:73457399-73457418 | Msa0184200:CDS | 60.0% |
| CCCCGTGAGCATAGCTCAGT+TGG | + | chr1_4:73457620-73457639 | None:intergenic | 60.0% | |
| !! | TGGGAGGGGATGGCTTTGAG+GGG | + | chr1_4:73457782-73457801 | None:intergenic | 60.0% |
| CTTCCCCACCTTCCTAGACG+AGG | + | chr1_4:73458849-73458868 | None:intergenic | 60.0% | |
| GGCTACTCTGCGGCGTTTGG+TGG | + | chr1_4:73454538-73454557 | None:intergenic | 65.0% | |
| GACCTTGCCGCATCTGGTGC+GGG | - | chr1_4:73457009-73457028 | Msa0184200:CDS | 65.0% | |
| TACCCGCACCAGATGCGGCA+AGG | + | chr1_4:73457014-73457033 | None:intergenic | 65.0% | |
| GCCGCATCTGGTGCGGGTAA+TGG | - | chr1_4:73457015-73457034 | Msa0184200:CDS | 65.0% | |
| ACGGGTTCGGAGAGAAGGGG+AGG | - | chr1_4:73457370-73457389 | Msa0184200:CDS | 65.0% | |
| CGGGTTCGGAGAGAAGGGGA+GGG | - | chr1_4:73457371-73457390 | Msa0184200:CDS | 65.0% | |
| GGGTTCGGAGAGAAGGGGAG+GGG | - | chr1_4:73457372-73457391 | Msa0184200:CDS | 65.0% | |
| TCGGAGAGAAGGGGAGGGGA+AGG | - | chr1_4:73457376-73457395 | Msa0184200:CDS | 65.0% | |
| ! | AGGGGAGGGGAAGGCTTTGG+GGG | - | chr1_4:73457385-73457404 | Msa0184200:CDS | 65.0% |
| !! | AGGGGAAGGCTTTGGGGGGA+TGG | - | chr1_4:73457390-73457409 | Msa0184200:CDS | 65.0% |
| !! | GGGGAAGGCTTTGGGGGGAT+GGG | - | chr1_4:73457391-73457410 | Msa0184200:CDS | 65.0% |
| GGCGGCTACTCTGCGGCGTT+TGG | + | chr1_4:73454541-73454560 | None:intergenic | 70.0% | |
| !! | GGGGAGGGGAAGGCTTTGGG+GGG | - | chr1_4:73457386-73457405 | Msa0184200:CDS | 70.0% |
| GGTGTCCGGGGTTCGAACCC+CGG | - | chr1_4:73457566-73457585 | Msa0184200:intron | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | + | chr1_4:73457574-73457593 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 73454373 | 73459213 | 73454373 | ID=Msa0184200;Name=Msa0184200 |
| chr1_4 | mRNA | 73454373 | 73459213 | 73454373 | ID=Msa0184200-mRNA-1;Parent=Msa0184200;Name=Msa0184200-mRNA-1;_AED=0.07;_eAED=0.07;_QI=104|1|1|1|1|1|7|290|504 |
| chr1_4 | exon | 73454373 | 73454743 | 73454373 | ID=Msa0184200-mRNA-1:exon:24978;Parent=Msa0184200-mRNA-1 |
| chr1_4 | exon | 73456304 | 73456369 | 73456304 | ID=Msa0184200-mRNA-1:exon:24977;Parent=Msa0184200-mRNA-1 |
| chr1_4 | exon | 73456482 | 73456660 | 73456482 | ID=Msa0184200-mRNA-1:exon:24976;Parent=Msa0184200-mRNA-1 |
| chr1_4 | exon | 73456891 | 73457119 | 73456891 | ID=Msa0184200-mRNA-1:exon:24975;Parent=Msa0184200-mRNA-1 |
| chr1_4 | exon | 73457351 | 73457575 | 73457351 | ID=Msa0184200-mRNA-1:exon:24974;Parent=Msa0184200-mRNA-1 |
| chr1_4 | exon | 73458045 | 73458384 | 73458045 | ID=Msa0184200-mRNA-1:exon:24973;Parent=Msa0184200-mRNA-1 |
| chr1_4 | exon | 73458715 | 73459213 | 73458715 | ID=Msa0184200-mRNA-1:exon:24972;Parent=Msa0184200-mRNA-1 |
| chr1_4 | five_prime_UTR | 73459110 | 73459213 | 73459110 | ID=Msa0184200-mRNA-1:five_prime_utr;Parent=Msa0184200-mRNA-1 |
| chr1_4 | CDS | 73458715 | 73459109 | 73458715 | ID=Msa0184200-mRNA-1:cds;Parent=Msa0184200-mRNA-1 |
| chr1_4 | CDS | 73458045 | 73458384 | 73458045 | ID=Msa0184200-mRNA-1:cds;Parent=Msa0184200-mRNA-1 |
| chr1_4 | CDS | 73457351 | 73457575 | 73457351 | ID=Msa0184200-mRNA-1:cds;Parent=Msa0184200-mRNA-1 |
| chr1_4 | CDS | 73456891 | 73457119 | 73456891 | ID=Msa0184200-mRNA-1:cds;Parent=Msa0184200-mRNA-1 |
| chr1_4 | CDS | 73456482 | 73456660 | 73456482 | ID=Msa0184200-mRNA-1:cds;Parent=Msa0184200-mRNA-1 |
| chr1_4 | CDS | 73456304 | 73456369 | 73456304 | ID=Msa0184200-mRNA-1:cds;Parent=Msa0184200-mRNA-1 |
| chr1_4 | CDS | 73454663 | 73454743 | 73454663 | ID=Msa0184200-mRNA-1:cds;Parent=Msa0184200-mRNA-1 |
| chr1_4 | three_prime_UTR | 73454373 | 73454662 | 73454373 | ID=Msa0184200-mRNA-1:three_prime_utr;Parent=Msa0184200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
