AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0573140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0573140 MtrunA17_Chr8g0389051 99.797 984 2 0 1 984 1 984 0.0 2040
Msa0573140 MtrunA17_Chr7g0249761 49.587 968 448 10 45 984 28 983 0.0 947
Msa0573140 MtrunA17_Chr5g0429251 73.939 495 109 3 1 494 1 476 0.0 755
Msa0573140 MtrunA17_Chr5g0429261 75.960 495 116 2 492 984 1 494 0.0 727
Msa0573140 MtrunA17_Chr3g0103751 32.905 1012 555 25 76 984 341 1331 3.46e-156 496
Msa0573140 MtrunA17_Chr5g0415021 33.272 541 304 12 76 566 138 671 1.58e-72 261
Msa0573140 MtrunA17_Chr3g0086711 26.241 423 231 11 98 487 453 827 1.27e-24 111
Msa0573140 MtrunA17_Chr3g0086711 30.688 189 104 6 336 513 1515 1687 8.16e-15 79.7
Msa0573140 MtrunA17_Chr1g0147341 24.265 544 306 21 76 575 473 954 2.57e-24 110
Msa0573140 MtrunA17_Chr1g0146611 33.333 144 85 6 336 475 58 194 1.94e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0573140 AT2G06990.1 79.859 993 186 3 6 984 3 995 0.0 1641
Msa0573140 AT1G59760.1 48.866 970 447 14 45 984 38 988 0.0 917
Msa0573140 AT3G46960.3 35.213 1011 534 22 76 984 225 1216 0.0 578
Msa0573140 AT3G46960.2 35.312 1011 533 23 76 984 216 1207 0.0 578
Msa0573140 AT3G46960.1 35.213 1011 534 22 76 984 353 1344 0.0 577
Msa0573140 AT1G70070.1 35.611 483 261 11 80 524 151 621 2.17e-75 270
Msa0573140 AT4G32700.2 26.829 451 247 14 76 487 512 918 8.43e-27 119
Msa0573140 AT5G61140.2 25.761 427 228 15 98 487 523 897 2.17e-21 101
Msa0573140 AT5G61140.2 30.978 184 110 6 336 513 1585 1757 9.41e-15 80.1
Msa0573140 AT5G61140.1 25.761 427 228 15 98 487 523 897 2.22e-21 101
Msa0573140 AT5G61140.1 30.978 184 110 6 336 513 1574 1746 8.56e-15 80.1

Find 259 sgRNAs with CRISPR-Local

Find 605 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTACCTGATGTGGGAAAA+AGG 0.216911 4_1:+76210970 Msa0573140:CDS
GTCACCGAATTAATGTTTAA+TGG 0.222685 4_1:+76213112 Msa0573140:CDS
GGAAAAGGTGGTTCTGCTTC+TGG 0.233820 4_1:+76208271 Msa0573140:CDS
TGGTGGGAGTGGATTGTATT+TGG 0.234213 4_1:+76208138 Msa0573140:CDS
CAGAACCCTTTGTCTGCATT+GGG 0.241586 4_1:+76215850 Msa0573140:three_prime_UTR
ATGAAAATTTGAGCGGAAAA+TGG 0.263088 4_1:-76207304 None:intergenic
CAGACTATTCGGAATATTCT+TGG 0.264291 4_1:+76215486 Msa0573140:three_prime_UTR
GTTGATTCCTGCTCCATTGC+TGG 0.266574 4_1:-76207350 None:intergenic
AGCAATGAAATTACTGTAAA+AGG 0.266678 4_1:+76215889 Msa0573140:three_prime_UTR
GGAATATCATAAGCTGAAAT+TGG 0.270577 4_1:+76211160 Msa0573140:CDS
CTCCTTTAGTTAGTACATTC+AGG 0.276561 4_1:+76210759 Msa0573140:CDS
GGGCGGGGTGGGCATGGTTT+TGG 0.279061 4_1:-76211711 None:intergenic
GGAATTGCTGTTCATCATTC+TGG 0.280658 4_1:+76209708 Msa0573140:CDS
AGAAAATAAAGAATCATTTC+AGG 0.301615 4_1:-76211227 None:intergenic
TGCTCAGATGATTTCTCTAT+TGG 0.304109 4_1:-76213291 None:intergenic
CACCTGTCTGAATTAATTAA+TGG 0.306693 4_1:-76215801 None:intergenic
TTAGTTATCATTTGAATGAT+TGG 0.307208 4_1:+76215986 Msa0573140:three_prime_UTR
TAACCTCAAAGACATGGTTT+TGG 0.327231 4_1:+76210727 Msa0573140:CDS
TTACTAAGGGCAGAGATTAA+TGG 0.328246 4_1:-76211886 None:intergenic
CAATTTATATGCTCGCAGTA+TGG 0.334359 4_1:+76215723 Msa0573140:three_prime_UTR
TTGTTCTTCTGCAGACTATT+CGG 0.337440 4_1:+76215475 Msa0573140:three_prime_UTR
CTTTCTCTCCAGGGCGGGGT+GGG 0.340851 4_1:-76211722 None:intergenic
AAGCATACTCCTTGCTGTTC+AGG 0.343693 4_1:+76211957 Msa0573140:CDS
GGTGGGACAGATTGGGGCTG+GGG 0.343868 4_1:+76211594 Msa0573140:CDS
CAGCAGAACAAAATTTGCTT+TGG 0.344204 4_1:-76215954 None:intergenic
TTCGTTGAGGTGTAATTGAT+TGG 0.352188 4_1:-76207491 None:intergenic
GAGATTAATGGTAATTGAAC+AGG 0.353778 4_1:-76211874 None:intergenic
TCTTCCTGTCATCAAAGAAT+TGG 0.354834 4_1:+76209734 Msa0573140:CDS
GGTGATAGTCACCGTTATAT+TGG 0.358611 4_1:+76209962 Msa0573140:CDS
TCTTCGAGGGGAGTATCATT+AGG 0.360737 4_1:+76214576 Msa0573140:CDS
GGTAAATCGAATGGAAGATT+TGG 0.365565 4_1:+76208250 Msa0573140:CDS
GCTTCCAAGGGCCGGAGATC+AGG 0.372035 4_1:-76211928 None:intergenic
GATAGAGCACGAATGCAAAT+TGG 0.376072 4_1:+76213459 Msa0573140:intron
TCGGCGGTGGACACCGGTTC+CGG 0.376643 4_1:-76207395 None:intergenic
TCTCCAGGGCGGGGTGGGCA+TGG 0.379010 4_1:-76211717 None:intergenic
ATCGTGAAAGGGGTGTTGTA+TGG 0.379808 4_1:+76207945 Msa0573140:CDS
CATATATCCTTAGTTTACTA+AGG 0.380472 4_1:-76211900 None:intergenic
TTCACCATTAAACATTAATT+CGG 0.382558 4_1:-76213116 None:intergenic
TGCATTTCACCTTTCTCTCC+AGG 0.383547 4_1:-76211732 None:intergenic
TACTCTCTGTTTATCTCTAA+AGG 0.385174 4_1:-76207702 None:intergenic
GCAATTGATACTTGTTGAAA+TGG 0.388936 4_1:-76207593 None:intergenic
ACTCCTTGCTGTTCAGGAGC+TGG 0.390356 4_1:+76211963 Msa0573140:CDS
TCAGAACCCTTTGTCTGCAT+TGG 0.391837 4_1:+76215849 Msa0573140:three_prime_UTR
AACAGTAAGGCCATTCTTGA+TGG 0.396227 4_1:+76213510 Msa0573140:CDS
TTCACCTTTCTCTCCAGGGC+GGG 0.396948 4_1:-76211727 None:intergenic
ACCTTCACAGGGTTAAGCTT+TGG 0.397852 4_1:-76212009 None:intergenic
TAAGAGAAGGTGGGACAGAT+TGG 0.401630 4_1:+76211586 Msa0573140:CDS
TGCATTGGGGATTGAGGAGT+GGG 0.403783 4_1:+76215864 Msa0573140:three_prime_UTR
CTTCAATTCCCAAGAGGAAA+AGG 0.412893 4_1:+76209587 Msa0573140:CDS
CCTAGTGTGGTATAATCATT+AGG 0.413009 4_1:+76215777 Msa0573140:three_prime_UTR
CGGAATATTCTTGGTTACTC+TGG 0.413283 4_1:+76215495 Msa0573140:three_prime_UTR
AAGAGAAGGTGGGACAGATT+GGG 0.417328 4_1:+76211587 Msa0573140:CDS
GTCGAATGCCACAGAGTTTG+CGG 0.419327 4_1:+76208027 Msa0573140:CDS
TCACGTGTTCCGCAGTGAAC+TGG 0.420579 4_1:-76210826 None:intergenic
GTTTGATCATCCTATGCATA+AGG 0.424049 4_1:+76212438 Msa0573140:CDS
TGATTACTCAAAGCTTTCAA+TGG 0.430787 4_1:-76207737 None:intergenic
TATGCTTTGCCGAGCTTCCA+AGG 0.432464 4_1:-76211941 None:intergenic
TGCAATGGGTTTAAATATGC+CGG 0.437253 4_1:+76209901 Msa0573140:CDS
CCGCCGTCGGCGGTGGACAC+CGG 0.439717 4_1:-76207401 None:intergenic
AACCACAGAGAAACGAAGTT+AGG 0.441438 4_1:+76207253 Msa0573140:five_prime_UTR
AGTCAGGAATTTACAGATGT+AGG 0.442488 4_1:+76207776 Msa0573140:CDS
TCACCTTTCTCTCCAGGGCG+GGG 0.444665 4_1:-76211726 None:intergenic
TGCAGTTGGAGAAGCTGACT+TGG 0.449759 4_1:+76215380 Msa0573140:CDS
TCATCAATTTCAATATGAAA+AGG 0.453667 4_1:+76210862 Msa0573140:CDS
ATCAGTGTAAACTACGTGAC+AGG 0.455162 4_1:-76208077 None:intergenic
ACCTCCTGATCTCCGGCCCT+TGG 0.455173 4_1:+76211924 Msa0573140:CDS
AGTGTCGCCGCCGTCGGCGG+TGG 0.455307 4_1:-76207408 None:intergenic
TGATGGATGTAATATACTCT+TGG 0.455877 4_1:+76213527 Msa0573140:CDS
CCTTTCTCTCCAGGGCGGGG+TGG 0.456496 4_1:-76211723 None:intergenic
CTTCGAGGGGAGTATCATTA+GGG 0.456913 4_1:+76214577 Msa0573140:CDS
TGATGAAATTCATTATATGA+AGG 0.458021 4_1:+76207922 Msa0573140:CDS
GTCAGGAATTTACAGATGTA+GGG 0.458805 4_1:+76207777 Msa0573140:CDS
TACCCAAAACCATGTCTTTG+AGG 0.459038 4_1:-76210730 None:intergenic
ATATTCTTGGTTACTCTGGC+TGG 0.460434 4_1:+76215499 Msa0573140:three_prime_UTR
TTTACCACCTGCTATTAAGA+TGG 0.462609 4_1:+76207985 Msa0573140:CDS
ATCTCCGGCCCTTGGAAGCT+CGG 0.463489 4_1:+76211932 Msa0573140:CDS
CTTGGTTACTCTGGCTGGTG+GGG 0.465973 4_1:+76215504 Msa0573140:three_prime_UTR
ATTTGCTTTGGAAATGTTCA+AGG 0.466484 4_1:-76215942 None:intergenic
AAAACGAAGTGAACCGGAAC+CGG 0.467109 4_1:+76207382 Msa0573140:CDS
GTAGCCTTGCTTGATGCTGC+AGG 0.467215 4_1:+76211014 Msa0573140:CDS
TCTTGGTTACTCTGGCTGGT+GGG 0.468577 4_1:+76215503 Msa0573140:three_prime_UTR
AGGTGGGACAGATTGGGGCT+GGG 0.468655 4_1:+76211593 Msa0573140:CDS
GTCCATTAATTAATTCAGAC+AGG 0.469436 4_1:+76215799 Msa0573140:three_prime_UTR
TCAACCAATTCTTTGATGAC+AGG 0.470906 4_1:-76209738 None:intergenic
TTCTTGGTTACTCTGGCTGG+TGG 0.471335 4_1:+76215502 Msa0573140:three_prime_UTR
AAGGTGGGACAGATTGGGGC+TGG 0.472672 4_1:+76211592 Msa0573140:CDS
TACAATCCACTCCCACCAAT+AGG 0.473323 4_1:-76208133 None:intergenic
CTGCATTGGGGATTGAGGAG+TGG 0.474439 4_1:+76215863 Msa0573140:three_prime_UTR
CGTGCTGCTGCTGATGCAGT+TGG 0.474550 4_1:+76215366 Msa0573140:CDS
AAACCATGCCCACCCCGCCC+TGG 0.477422 4_1:+76211714 Msa0573140:CDS
CTCCTTGCTGTTCAGGAGCT+GGG 0.479025 4_1:+76211964 Msa0573140:CDS
CCATGGTACCGTTGTGGAGA+GGG 0.479305 4_1:-76207544 None:intergenic
AGTCACCGTTATATTGGATC+TGG 0.479637 4_1:+76209968 Msa0573140:CDS
GGTTCTGAAGGTAGACGAAC+AGG 0.481813 4_1:-76215834 None:intergenic
CCACCCCGCCCTGGAGAGAA+AGG 0.486232 4_1:+76211723 Msa0573140:CDS
GTATCATTAGGGCAGCTAGA+AGG 0.486870 4_1:+76214588 Msa0573140:CDS
CTTTAGATGAGTGGAAGGGC+TGG 0.488920 4_1:+76210098 Msa0573140:intron
AGCGAGTGAAAGCCTTCGAC+GGG 0.494908 4_1:+76215419 Msa0573140:CDS
TTTGCCGAGCTTCCAAGGGC+CGG 0.495193 4_1:-76211936 None:intergenic
TGAAGAAGTGTCGCCGCCGT+CGG 0.496324 4_1:-76207414 None:intergenic
GTCTCTGCTCACACCTCCGC+CGG 0.496523 4_1:+76207644 Msa0573140:CDS
GGCAACATCAACTCGATAGC+AGG 0.497538 4_1:-76209672 None:intergenic
ACCACAGAGAAACGAAGTTA+GGG 0.497652 4_1:+76207254 Msa0573140:five_prime_UTR
ACCATGCCTCTGATTCCCAT+TGG 0.499022 4_1:-76216034 None:intergenic
TCGTGAAAGGGGTGTTGTAT+GGG 0.500015 4_1:+76207946 Msa0573140:CDS
AATTTATATGCTCGCAGTAT+GGG 0.501060 4_1:+76215724 Msa0573140:three_prime_UTR
TGGATCTGGTGAATATATAC+AGG 0.502543 4_1:+76209982 Msa0573140:CDS
ACTCGATAGCAGGTAAGCTT+CGG 0.502820 4_1:-76209662 None:intergenic
TATCATAATGATTGATGAGC+AGG 0.503248 4_1:+76210151 Msa0573140:CDS
ATAACAAGACATGTCGCATT+CGG 0.504190 4_1:-76207827 None:intergenic
ACTTTACTTCATTGTTCACC+TGG 0.504730 4_1:+76211666 Msa0573140:CDS
TCTCTGCCCTTAGTAAACTA+AGG 0.506371 4_1:+76211893 Msa0573140:CDS
ACTCGGAAAACGAAGTGAAC+CGG 0.508430 4_1:+76207376 Msa0573140:CDS
TTTGTCTGCATTGGGGATTG+AGG 0.509134 4_1:+76215858 Msa0573140:three_prime_UTR
AAAGGTGGTTCTGCTTCTGG+TGG 0.510116 4_1:+76208274 Msa0573140:CDS
TGATATATACAAGATTGTTA+AGG 0.511551 4_1:+76208300 Msa0573140:CDS
TGAACTTGTCAATCAAATAG+AGG 0.511641 4_1:+76212399 Msa0573140:CDS
GGTTACTCTGGCTGGTGGGG+CGG 0.515553 4_1:+76215507 Msa0573140:three_prime_UTR
CTATCACTTACCAGTCGACC+AGG 0.516457 4_1:-76211254 None:intergenic
GCAAGAGCCAGCAATGGAGC+AGG 0.518743 4_1:+76207343 Msa0573140:CDS
GAAATATAGAGAATTGAGTC+AGG 0.519365 4_1:+76207760 Msa0573140:CDS
TTATATGAAGGATCGTGAAA+GGG 0.519649 4_1:+76207934 Msa0573140:CDS
TATATTACATCCATCAAGAA+TGG 0.520179 4_1:-76213520 None:intergenic
TTGGTATAAAACAACTTGCA+AGG 0.521291 4_1:-76213272 None:intergenic
TATATGTACCTCCTGATCTC+CGG 0.521941 4_1:+76211917 Msa0573140:CDS
TTTCACGGTGAAAACTGCAT+TGG 0.522105 4_1:+76215645 Msa0573140:three_prime_UTR
AATTCAGACCTTACCTGATG+TGG 0.522375 4_1:+76210962 Msa0573140:intron
GTGTAGTTCAATTGAAAGGA+AGG 0.523333 4_1:+76213053 Msa0573140:CDS
ACGAAAGACGAATCACTTCA+CGG 0.527695 4_1:+76207509 Msa0573140:CDS
TCGAATGGAAGATTTGGAAA+AGG 0.528518 4_1:+76208256 Msa0573140:CDS
CCGGTGTCCACCGCCGACGG+CGG 0.528646 4_1:+76207401 Msa0573140:CDS
CATTACAAGAGAACCCGAAA+AGG 0.528954 4_1:-76215565 None:intergenic
TCAACTATATAACCGCCAAC+AGG 0.529420 4_1:-76211642 None:intergenic
AGCCTGAATGTACTAACTAA+AGG 0.529528 4_1:-76210761 None:intergenic
ATTCTTTGATGACAGGAAGA+AGG 0.530033 4_1:-76209731 None:intergenic
AAGGGTGTCTATGCTGGAGC+AGG 0.530066 4_1:+76210989 Msa0573140:CDS
CTCTGTGGCATTCGACATAG+TGG 0.530069 4_1:-76208020 None:intergenic
ATTATATGAAGGATCGTGAA+AGG 0.530275 4_1:+76207933 Msa0573140:CDS
CAGTGAACTGGCCTTCTGCT+CGG 0.530427 4_1:-76210814 None:intergenic
AAGGAATTGAGCGCATCGGA+TGG 0.530889 4_1:-76215546 None:intergenic
CAAATGACTGACATCTTCGA+GGG 0.531212 4_1:+76214563 Msa0573140:CDS
CAGATTAAAGTAAGAGAAGG+TGG 0.532868 4_1:+76211576 Msa0573140:intron
CTTGCTTGATGCTGCAGGGG+AGG 0.536139 4_1:+76211019 Msa0573140:CDS
TACTGTCTCAGTAGCAAAGA+GGG 0.536146 4_1:-76209790 None:intergenic
CTTAGAATAGTGATGCCAAT+GGG 0.536565 4_1:+76216019 Msa0573140:three_prime_UTR
GCATTTCACCTTTCTCTCCA+GGG 0.541047 4_1:-76211731 None:intergenic
GCAATTCCTCGCTGAAGAAG+TGG 0.544503 4_1:-76209693 None:intergenic
TTAGAGGTGGTTTGGATCAG+CGG 0.545206 4_1:-76215689 None:intergenic
TCATGAAATTCAACAACTGA+AGG 0.546269 4_1:+76212607 Msa0573140:CDS
CCTAATGATTATACCACACT+AGG 0.546411 4_1:-76215777 None:intergenic
TTTAGATGAGTGGAAGGGCT+GGG 0.547075 4_1:+76210099 Msa0573140:intron
GGGAAGGGTGGTAAATCGAA+TGG 0.547674 4_1:+76208241 Msa0573140:CDS
AGAACCCTTTGTCTGCATTG+GGG 0.548794 4_1:+76215851 Msa0573140:three_prime_UTR
GATAGTGTAGTTCAATTGAA+AGG 0.549226 4_1:+76213049 Msa0573140:CDS
TCGCGAGTCTTAAAGAAGCT+TGG 0.549421 4_1:+76213013 Msa0573140:CDS
ATCGCCTGTGTCAATCAAGC+AGG 0.550338 4_1:-76213080 None:intergenic
CAAGGGCAGCAACTTGATGA+TGG 0.552445 4_1:-76213254 None:intergenic
GCCATGGTACCGTTGTGGAG+AGG 0.553017 4_1:-76207545 None:intergenic
TCAAATGACTGACATCTTCG+AGG 0.556182 4_1:+76214562 Msa0573140:CDS
TCAATCCCCAATGCAGACAA+AGG 0.557365 4_1:-76215856 None:intergenic
CAATCCCCAATGCAGACAAA+GGG 0.557415 4_1:-76215855 None:intergenic
AATGTACTAACTAAAGGAGC+AGG 0.560102 4_1:-76210755 None:intergenic
AAGGTGGTTCTGCTTCTGGT+GGG 0.560327 4_1:+76208275 Msa0573140:CDS
TGGATCAAGTGTGAAAGGAT+AGG 0.560748 4_1:-76207573 None:intergenic
GTTAAGCAGAAACTTGGTGA+AGG 0.561016 4_1:+76208220 Msa0573140:CDS
AGTATGTCGAATCAACAGTA+AGG 0.561577 4_1:+76213497 Msa0573140:CDS
GAACCGGTGTCCACCGCCGA+CGG 0.562070 4_1:+76207398 Msa0573140:CDS
CAGCGAGTGAAAGCCTTCGA+CGG 0.562359 4_1:+76215418 Msa0573140:CDS
TAGCCTTGCTTGATGCTGCA+GGG 0.564277 4_1:+76211015 Msa0573140:CDS
ATGACTACGGAGATTCTTCG+TGG 0.566120 4_1:+76207848 Msa0573140:CDS
AGAGAAGGTGGGACAGATTG+GGG 0.569047 4_1:+76211588 Msa0573140:CDS
AATGGAAGATTTGGAAAAGG+TGG 0.569254 4_1:+76208259 Msa0573140:CDS
GCAGAAACTTGGTGAAGGGA+AGG 0.571285 4_1:+76208225 Msa0573140:CDS
TTAAGCAGAAACTTGGTGAA+GGG 0.571445 4_1:+76208221 Msa0573140:CDS
TGTACCTTTAGATGAGTGGA+AGG 0.572811 4_1:+76210093 Msa0573140:intron
CTTCGTGGAATGTTGTATCG+TGG 0.573133 4_1:+76207863 Msa0573140:CDS
AATGTTGTTAAGAAACCTGT+TGG 0.574141 4_1:+76211627 Msa0573140:CDS
CAGAAACTTGGTGAAGGGAA+GGG 0.574536 4_1:+76208226 Msa0573140:CDS
GTTGTTAAGAAACCTGTTGG+CGG 0.575282 4_1:+76211630 Msa0573140:CDS
AAGTGATTCGTCTTTCGTTG+AGG 0.576556 4_1:-76207504 None:intergenic
AGAAGTGTCGCCGCCGTCGG+CGG 0.577944 4_1:-76207411 None:intergenic
ACATAATGCTGCAACGGTGT+CGG 0.578972 4_1:-76208106 None:intergenic
TATTGTGTAGGCTGAAGTAT+CGG 0.579161 4_1:+76211139 Msa0573140:intron
TTAAGCTTTGGAAGACCTTG+AGG 0.579381 4_1:-76211997 None:intergenic
AGGAATTGAGCGCATCGGAT+GGG 0.579687 4_1:-76215545 None:intergenic
ATGCAGACAAAGGGTTCTGA+AGG 0.581371 4_1:-76215846 None:intergenic
CTCCCCTGCAGCATCAAGCA+AGG 0.582351 4_1:-76211018 None:intergenic
TCTTGTAATGGTATGTGCAA+TGG 0.584445 4_1:+76215578 Msa0573140:three_prime_UTR
TATTCACTGCTGTTAAGAAG+TGG 0.585998 4_1:+76209936 Msa0573140:CDS
ATATATCCTTAGTTTACTAA+GGG 0.587989 4_1:-76211899 None:intergenic
CCCTCTCCACAACGGTACCA+TGG 0.588675 4_1:+76207544 Msa0573140:CDS
CTGTCTTGAAGCTGTTGTAG+AGG 0.589916 4_1:-76213342 None:intergenic
AGTGGAAGGGCTGGGCGTCG+TGG 0.590542 4_1:+76210107 Msa0573140:CDS
TGTAATATACTCTTGGTCAA+AGG 0.591936 4_1:+76213534 Msa0573140:CDS
AATTTGATGAGCCGAGCAGA+AGG 0.592081 4_1:+76210803 Msa0573140:CDS
ATTCACCAGATCCAATATAA+CGG 0.593476 4_1:-76209973 None:intergenic
GCAGCCTGCTTGATTGACAC+AGG 0.593822 4_1:+76213076 Msa0573140:CDS
TTGCAGATTAAAGTAAGAGA+AGG 0.593993 4_1:+76211573 Msa0573140:intron
ATTCAGACCTTACCTGATGT+GGG 0.593998 4_1:+76210963 Msa0573140:intron
TGGTATAAAACAACTTGCAA+GGG 0.594056 4_1:-76213271 None:intergenic
GGTACCGTTGTGGAGAGGGT+TGG 0.594794 4_1:-76207540 None:intergenic
GCCTGAGATGAAAATTTGAG+CGG 0.596416 4_1:-76207311 None:intergenic
AGAGCACGAATGCAAATTGG+AGG 0.596817 4_1:+76213462 Msa0573140:CDS
ATGCTTTGCCGAGCTTCCAA+GGG 0.600340 4_1:-76211940 None:intergenic
ATTCACTGCTGTTAAGAAGT+GGG 0.601230 4_1:+76209937 Msa0573140:CDS
CGAAAAGGAATTGAGCGCAT+CGG 0.603703 4_1:-76215550 None:intergenic
TCCAAAGCTTAACCCTGTGA+AGG 0.603957 4_1:+76212008 Msa0573140:CDS
AGCCTTGCTTGATGCTGCAG+GGG 0.606074 4_1:+76211016 Msa0573140:CDS
GACATGTCTTGTTATGACTA+CGG 0.606987 4_1:+76207835 Msa0573140:CDS
TGTAAGTTAGATTCAAGATG+TGG 0.608430 4_1:+76212547 Msa0573140:intron
AGCTTCAAGACAGTGCAAGA+AGG 0.609159 4_1:+76213352 Msa0573140:CDS
GATATGTACCTTTAGATGAG+TGG 0.609300 4_1:+76210089 Msa0573140:intron
AATGGAGCAAGAGCCAGCAA+TGG 0.609412 4_1:+76207337 Msa0573140:exon
TGAAATGGATCAAGTGTGAA+AGG 0.609448 4_1:-76207578 None:intergenic
TCCAAGGGCCGGAGATCAGG+AGG 0.609949 4_1:-76211925 None:intergenic
GTCGTGGCAAAGATGAGCGT+GGG 0.610558 4_1:+76210123 Msa0573140:CDS
CGCAGGTGCGTTCTGAACTG+CGG 0.612007 4_1:-76207451 None:intergenic
CGTCGTGGCAAAGATGAGCG+TGG 0.615347 4_1:+76210122 Msa0573140:CDS
AACTGCTACTTCGTGAACGC+AGG 0.617384 4_1:-76207468 None:intergenic
ACTTAGAATAGTGATGCCAA+TGG 0.617909 4_1:+76216018 Msa0573140:three_prime_UTR
ACCCTAACTTCGTTTCTCTG+TGG 0.620405 4_1:-76207255 None:intergenic
GAGCAGGAATCAACAACACT+CGG 0.620756 4_1:+76207359 Msa0573140:CDS
ATCAAATTAAGTGCTTTGAG+AGG 0.623177 4_1:+76212570 Msa0573140:CDS
ACAGATGTAGGGTTGATGAC+TGG 0.623281 4_1:+76207788 Msa0573140:CDS
TGTAGTTCAATTGAAAGGAA+GGG 0.623395 4_1:+76213054 Msa0573140:CDS
CCAAGAGGAAAAGGATACAG+TGG 0.624075 4_1:+76209596 Msa0573140:CDS
GCCAATGGGAATCAGAGGCA+TGG 0.624087 4_1:+76216033 Msa0573140:three_prime_UTR
TAAACATTAATTCGGTGACA+AGG 0.624665 4_1:-76213108 None:intergenic
ACTTGACTTCAATTCCCAAG+AGG 0.624800 4_1:+76209581 Msa0573140:CDS
AGATTAAAGTAAGAGAAGGT+GGG 0.625932 4_1:+76211577 Msa0573140:intron
GTGATGCCAATGGGAATCAG+AGG 0.627632 4_1:+76216028 Msa0573140:three_prime_UTR
TATATGAAGGATCGTGAAAG+GGG 0.635140 4_1:+76207935 Msa0573140:CDS
AATTGCGTATTCTGCAATTG+CGG 0.635689 4_1:-76207672 None:intergenic
CATTAATTAATTCAGACAGG+TGG 0.635886 4_1:+76215802 Msa0573140:three_prime_UTR
AAAACCATCTTAATAGCAGG+TGG 0.640804 4_1:-76207989 None:intergenic
CAGTGCAAGAAGGATAGCAG+AGG 0.642671 4_1:+76213362 Msa0573140:CDS
GCGCATCGGATGGGATGTGA+AGG 0.653260 4_1:-76215536 None:intergenic
TTTCACCTTTCTCTCCAGGG+CGG 0.655858 4_1:-76211728 None:intergenic
GAGGTGGTTTGGATCAGCGG+CGG 0.661329 4_1:-76215686 None:intergenic
TTACTGTCTCAGTAGCAAAG+AGG 0.661591 4_1:-76209791 None:intergenic
TCAGTGTAAACTACGTGACA+GGG 0.662220 4_1:-76208076 None:intergenic
CTCTCCAACCCTCTCCACAA+CGG 0.662230 4_1:+76207536 Msa0573140:CDS
GCATTGGGGATTGAGGAGTG+GGG 0.666702 4_1:+76215865 Msa0573140:three_prime_UTR
TGCCCAGCTCCTGAACAGCA+AGG 0.669683 4_1:-76211966 None:intergenic
AAACTTGGTGAAGGGAAGGG+TGG 0.671860 4_1:+76208229 Msa0573140:CDS
ATGCCACAGAGTTTGCGGAG+TGG 0.675154 4_1:+76208032 Msa0573140:CDS
AATCCACTCCGCAAACTCTG+TGG 0.678770 4_1:-76208035 None:intergenic
AATGAATAACCTCAAAGACA+TGG 0.682984 4_1:+76210721 Msa0573140:CDS
GTACCTTTAGATGAGTGGAA+GGG 0.683809 4_1:+76210094 Msa0573140:intron
TGCAATGGACAAAATTGTCG+TGG 0.684946 4_1:+76215593 Msa0573140:three_prime_UTR
ATGTTGCCACTTCTTCAGCG+AGG 0.692681 4_1:+76209687 Msa0573140:CDS
TATCACTTACCAGTCGACCA+GGG 0.697939 4_1:-76211253 None:intergenic
ACTGCTGTTAAGAAGTGGGA+TGG 0.700131 4_1:+76209941 Msa0573140:CDS
AAATGACTGACATCTTCGAG+GGG 0.700286 4_1:+76214564 Msa0573140:CDS
AGATTAATGGTAATTGAACA+GGG 0.701469 4_1:-76211873 None:intergenic
GAATGATAGATGACCTAGTG+TGG 0.723788 4_1:+76215764 Msa0573140:three_prime_UTR
AGCAGAAGGCCAGTTCACTG+CGG 0.731901 4_1:+76210817 Msa0573140:CDS
GCGAGTGAAAGCCTTCGACG+GGG 0.744115 4_1:+76215420 Msa0573140:CDS
AGAGAAAGGTGAAATGCATG+TGG 0.767410 4_1:+76211737 Msa0573140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTTCTTATTTATATT+TGG + chr4_1:76209306-76209325 Msa0573140:intron 10.0%
!! ATTATATAAAGTATAAACAA+CGG - chr4_1:76210469-76210488 None:intergenic 10.0%
!! TAAGATAATGATATCATAAA+TGG + chr4_1:76208516-76208535 Msa0573140:intron 15.0%
!! ATATATGCATATGATATTAA+CGG - chr4_1:76208676-76208695 None:intergenic 15.0%
!!! CTTGATAATATATTTTTGAA+AGG + chr4_1:76209852-76209871 Msa0573140:intron 15.0%
!!! TTTGTTAATTATATTTTCTG+TGG + chr4_1:76211072-76211091 Msa0573140:intron 15.0%
!! ACATTTATATATAGAGAATA+TGG - chr4_1:76212484-76212503 None:intergenic 15.0%
!! ATATATAAATGTGATGTTAT+TGG + chr4_1:76212492-76212511 Msa0573140:intron 15.0%
!! CAGTTTAGAAAAATAAATTA+AGG - chr4_1:76212895-76212914 None:intergenic 15.0%
!! TCTAATTTATATTCATAGAA+GGG - chr4_1:76214703-76214722 None:intergenic 15.0%
!! TTCTAATTTATATTCATAGA+AGG - chr4_1:76214704-76214723 None:intergenic 15.0%
!!! TTATCTCTATATGATATTTT+AGG + chr4_1:76215244-76215263 Msa0573140:intron 15.0%
!! AATTGTACAAAAATATTTAG+AGG - chr4_1:76215708-76215727 None:intergenic 15.0%
!!! ACACATTTTTTTTTTTTTGA+GGG - chr4_1:76216149-76216168 None:intergenic 15.0%
!! TGATGAAATTCATTATATGA+AGG + chr4_1:76207922-76207941 Msa0573140:CDS 20.0%
!!! TATTAAGATGGTTTTTCTTT+CGG + chr4_1:76207997-76208016 Msa0573140:CDS 20.0%
!!! TAGAGAAGATAATTTTCTTA+AGG + chr4_1:76208183-76208202 Msa0573140:CDS 20.0%
!! TGATATATACAAGATTGTTA+AGG + chr4_1:76208300-76208319 Msa0573140:CDS 20.0%
!!! ATTTTTTTTTTTTGTGGAAC+TGG + chr4_1:76208375-76208394 Msa0573140:intron 20.0%
!! CAATTTAATATTCAATAAGC+TGG - chr4_1:76208474-76208493 None:intergenic 20.0%
!! TATATGCATATGATATTAAC+GGG - chr4_1:76208675-76208694 None:intergenic 20.0%
!! ATATGCATATATTGAATGTA+AGG + chr4_1:76208684-76208703 Msa0573140:intron 20.0%
!!! TATAATATTAGTTTAGTACG+TGG + chr4_1:76208857-76208876 Msa0573140:intron 20.0%
!! GTTCTTGATTCATTTATATT+TGG + chr4_1:76208902-76208921 Msa0573140:intron 20.0%
!! GATTCATTTATATTTGGTAA+AGG + chr4_1:76208908-76208927 Msa0573140:intron 20.0%
!! AAGGACTAAATATTATTGTA+AGG + chr4_1:76208927-76208946 Msa0573140:intron 20.0%
!! AGGACTAAATATTATTGTAA+GGG + chr4_1:76208928-76208947 Msa0573140:intron 20.0%
!! AAAAAGCAAATTGTAAAACA+GGG - chr4_1:76209354-76209373 None:intergenic 20.0%
!! AAAAAAGCAAATTGTAAAAC+AGG - chr4_1:76209355-76209374 None:intergenic 20.0%
!!! TTATTGCTCTTTATTTTAGT+TGG + chr4_1:76209453-76209472 Msa0573140:intron 20.0%
!! ACAAAACTAACTATTATCAT+GGG - chr4_1:76210243-76210262 None:intergenic 20.0%
!!! ATAATAGTTAGTTTTGTGTA+AGG + chr4_1:76210246-76210265 Msa0573140:intron 20.0%
!! CTTTATATAATAACTCTTGT+TGG + chr4_1:76210478-76210497 Msa0573140:intron 20.0%
!! CATTCTATTCTTAGTTATAT+TGG + chr4_1:76210566-76210585 Msa0573140:intron 20.0%
!! TCATCAATTTCAATATGAAA+AGG + chr4_1:76210862-76210881 Msa0573140:CDS 20.0%
!!! AAATACAAATCAGGTTTTAA+AGG - chr4_1:76210905-76210924 None:intergenic 20.0%
!! AATTAACAAAACAAAACAGA+TGG - chr4_1:76211062-76211081 None:intergenic 20.0%
!! AGAAAATAAAGAATCATTTC+AGG - chr4_1:76211230-76211249 None:intergenic 20.0%
!! ATATATCCTTAGTTTACTAA+GGG - chr4_1:76211902-76211921 None:intergenic 20.0%
!! TACTTATGCTATCAAAATTA+AGG + chr4_1:76212075-76212094 Msa0573140:intron 20.0%
!! ACTTATGCTATCAAAATTAA+GGG + chr4_1:76212076-76212095 Msa0573140:intron 20.0%
!! AAAAGTTGTAGCAAATTTAT+TGG + chr4_1:76212168-76212187 Msa0573140:intron 20.0%
!! ATGGAATAATACATAAGTAA+TGG - chr4_1:76212336-76212355 None:intergenic 20.0%
!! GTAAAATGTAGTAAATAATG+AGG - chr4_1:76212671-76212690 None:intergenic 20.0%
!!! ATTTTACTATTAAGCTAACT+AGG + chr4_1:76212684-76212703 Msa0573140:intron 20.0%
!! AGTTGTTAATTATTCACATT+TGG - chr4_1:76212781-76212800 None:intergenic 20.0%
!! ATTAACAACTTAACATTTGA+TGG + chr4_1:76212791-76212810 Msa0573140:intron 20.0%
!! TTAACAACTTAACATTTGAT+GGG + chr4_1:76212792-76212811 Msa0573140:intron 20.0%
!! TTGATGAACTTAATAGTTAT+TGG + chr4_1:76212936-76212955 Msa0573140:intron 20.0%
!! TGATGAACTTAATAGTTATT+GGG + chr4_1:76212937-76212956 Msa0573140:intron 20.0%
!! TTCACCATTAAACATTAATT+CGG - chr4_1:76213119-76213138 None:intergenic 20.0%
!! AAAGCAAAATAAAGAATACA+AGG + chr4_1:76213854-76213873 Msa0573140:intron 20.0%
!! AAGCAAAATAAAGAATACAA+GGG + chr4_1:76213855-76213874 Msa0573140:intron 20.0%
!! ATTATCAAGGGATAATAATT+TGG - chr4_1:76214800-76214819 None:intergenic 20.0%
!!! AGAAATCATATCATAGTTTT+GGG + chr4_1:76215003-76215022 Msa0573140:intron 20.0%
!!! TATAGAGATAACTTTTAACA+AGG - chr4_1:76215235-76215254 None:intergenic 20.0%
!! TTAGTTATCATTTGAATGAT+TGG + chr4_1:76215986-76216005 Msa0573140:three_prime_UTR 20.0%
!!! CACATTTTTTTTTTTTTGAG+GGG - chr4_1:76216148-76216167 None:intergenic 20.0%
!!! CACACATTTTTTTTTTTTTG+AGG - chr4_1:76216150-76216169 None:intergenic 20.0%
!! ATTATGTTTTTCCTATTGGT+GGG + chr4_1:76208122-76208141 Msa0573140:CDS 25.0%
!! AGAAGATAATTTTCTTAAGG+TGG + chr4_1:76208186-76208205 Msa0573140:CDS 25.0%
! ATCAAAATAAACAAGATCCT+TGG - chr4_1:76208445-76208464 None:intergenic 25.0%
!!! AAGGATCTTGTTTATTTTGA+TGG + chr4_1:76208444-76208463 Msa0573140:intron 25.0%
! ATTAAATTGTTGCGACATAT+TGG + chr4_1:76208485-76208504 Msa0573140:intron 25.0%
!! TGAAAATAGAAGATTTTCCT+TGG + chr4_1:76208818-76208837 Msa0573140:intron 25.0%
! ATTCTAAATGTGGTATTTGA+GGG - chr4_1:76209212-76209231 None:intergenic 25.0%
!!! AAATTCGTAATGAGTTTTGT+GGG - chr4_1:76209265-76209284 None:intergenic 25.0%
!! TAAATTCGTAATGAGTTTTG+TGG - chr4_1:76209266-76209285 None:intergenic 25.0%
! TAAAGAGCAATAAAATAGTG+TGG - chr4_1:76209446-76209465 None:intergenic 25.0%
!! TCTTAATTTTCAGATGATCA+TGG + chr4_1:76209482-76209501 Msa0573140:intron 25.0%
!!! TTATCATTTTTAGCTTCAGT+AGG + chr4_1:76209523-76209542 Msa0573140:CDS 25.0%
!!! ATGCTTTATTTTTTTGGTGT+TGG + chr4_1:76210011-76210030 Msa0573140:intron 25.0%
! ACATATCATTAATTGTGAGT+GGG - chr4_1:76210076-76210095 None:intergenic 25.0%
! TACATATCATTAATTGTGAG+TGG - chr4_1:76210077-76210096 None:intergenic 25.0%
! TATATTTCATTATGCTGCAT+CGG - chr4_1:76210213-76210232 None:intergenic 25.0%
! CACAAAACTAACTATTATCA+TGG - chr4_1:76210244-76210263 None:intergenic 25.0%
! TAATTACATGCTATTGCTAA+CGG - chr4_1:76210327-76210346 None:intergenic 25.0%
! ATGAACAGAATCTGTAAATT+AGG + chr4_1:76210384-76210403 Msa0573140:intron 25.0%
!!! ATCTGATTATTTTGTACAGA+TGG + chr4_1:76210697-76210716 Msa0573140:intron 25.0%
!!! AAATCAGGTTTTAAAGGAAA+TGG - chr4_1:76210899-76210918 None:intergenic 25.0%
! GCTATTATTCATTATTGTGT+AGG + chr4_1:76211127-76211146 Msa0573140:intron 25.0%
! TGATAGTTATCGTTTATCAT+TGG + chr4_1:76211271-76211290 Msa0573140:intron 25.0%
!!! AAGAGAATGAAACAGTTTTT+TGG - chr4_1:76211830-76211849 None:intergenic 25.0%
! AGATTAATGGTAATTGAACA+GGG - chr4_1:76211876-76211895 None:intergenic 25.0%
! CATATATCCTTAGTTTACTA+AGG - chr4_1:76211903-76211922 None:intergenic 25.0%
! CTTATGCTATCAAAATTAAG+GGG + chr4_1:76212077-76212096 Msa0573140:intron 25.0%
!! CGATTTTTATGTAAACTGTA+TGG + chr4_1:76212144-76212163 Msa0573140:intron 25.0%
! ATTGTATCTTCCCAATATTT+GGG + chr4_1:76212199-76212218 Msa0573140:intron 25.0%
! TTAAAACATGCCCAAATATT+GGG - chr4_1:76212212-76212231 None:intergenic 25.0%
!! TTTAAAACATGCCCAAATAT+TGG - chr4_1:76212213-76212232 None:intergenic 25.0%
! TGCTAAAAATATGATGCATA+AGG - chr4_1:76212267-76212286 None:intergenic 25.0%
! TATTCCATAACTAAATTTCC+AGG + chr4_1:76212348-76212367 Msa0573140:intron 25.0%
! TTATTCACATTTGGTCATAT+AGG - chr4_1:76212772-76212791 None:intergenic 25.0%
! TAAGTTCATCAAAACAATCA+TGG - chr4_1:76212928-76212947 None:intergenic 25.0%
! GATGAACTTAATAGTTATTG+GGG + chr4_1:76212938-76212957 Msa0573140:intron 25.0%
!!! TGTTTGTTGTTTTTTCTGTA+TGG + chr4_1:76213151-76213170 Msa0573140:intron 25.0%
! TTATAAATGGGATTACTCTA+TGG + chr4_1:76213431-76213450 Msa0573140:intron 25.0%
! TATATTACATCCATCAAGAA+TGG - chr4_1:76213523-76213542 None:intergenic 25.0%
! TTTGAATTATGAGAAACATC+TGG + chr4_1:76213747-76213766 Msa0573140:intron 25.0%
! TGGAATAATTTAGTAGTACA+TGG + chr4_1:76213767-76213786 Msa0573140:intron 25.0%
! AGCAAAATAAAGAATACAAG+GGG + chr4_1:76213856-76213875 Msa0573140:intron 25.0%
! AAACTTGTGTTCAAACTTAA+AGG - chr4_1:76213894-76213913 None:intergenic 25.0%
!!! TTATTTTGCTTCGTAATGTA+CGG + chr4_1:76214175-76214194 Msa0573140:intron 25.0%
!!! TTGTTTCTTATTTTTCTCCT+AGG + chr4_1:76214517-76214536 Msa0573140:intron 25.0%
!!! TGTTTCTTATTTTTCTCCTA+GGG + chr4_1:76214518-76214537 Msa0573140:intron 25.0%
!!! TTGATTTGTACTAGTGTTTA+GGG + chr4_1:76214742-76214761 Msa0573140:intron 25.0%
!! GAGAAATCATATCATAGTTT+TGG + chr4_1:76215002-76215021 Msa0573140:intron 25.0%
! TATCAAACATTACATACGTA+AGG - chr4_1:76215098-76215117 None:intergenic 25.0%
!! TTGCTAAATTAGAAAGTGTA+TGG + chr4_1:76215143-76215162 Msa0573140:intron 25.0%
! AATTACTGAAACACAAACAA+CGG - chr4_1:76215179-76215198 None:intergenic 25.0%
! TCAGTAATTATGTTTACCAT+TGG + chr4_1:76215190-76215209 Msa0573140:intron 25.0%
!! AAAAACGAAGAATTTTCCAA+TGG - chr4_1:76215209-76215228 None:intergenic 25.0%
! TTTAGGTCTAATTGATTGTT+TGG + chr4_1:76215261-76215280 Msa0573140:intron 25.0%
! AAAAATATTTAGAGGTGGTT+TGG - chr4_1:76215700-76215719 None:intergenic 25.0%
! TGTACAAAAATATTTAGAGG+TGG - chr4_1:76215705-76215724 None:intergenic 25.0%
! AGCAATGAAATTACTGTAAA+AGG + chr4_1:76215889-76215908 Msa0573140:three_prime_UTR 25.0%
ATGAAAATTTGAGCGGAAAA+TGG - chr4_1:76207307-76207326 None:intergenic 30.0%
! GCAATTGATACTTGTTGAAA+TGG - chr4_1:76207596-76207615 None:intergenic 30.0%
TACTCTCTGTTTATCTCTAA+AGG - chr4_1:76207705-76207724 None:intergenic 30.0%
TGATTACTCAAAGCTTTCAA+TGG - chr4_1:76207740-76207759 None:intergenic 30.0%
GAAATATAGAGAATTGAGTC+AGG + chr4_1:76207760-76207779 Msa0573140:CDS 30.0%
ATTATATGAAGGATCGTGAA+AGG + chr4_1:76207933-76207952 Msa0573140:CDS 30.0%
TTATATGAAGGATCGTGAAA+GGG + chr4_1:76207934-76207953 Msa0573140:CDS 30.0%
AGAAAAACCATCTTAATAGC+AGG - chr4_1:76207995-76208014 None:intergenic 30.0%
! CAGCATTATGTTTTTCCTAT+TGG + chr4_1:76208118-76208137 Msa0573140:CDS 30.0%
! CATTATGTTTTTCCTATTGG+TGG + chr4_1:76208121-76208140 Msa0573140:CDS 30.0%
! AGATAATTTTCTTAAGGTGG+AGG + chr4_1:76208189-76208208 Msa0573140:CDS 30.0%
! ACTTTTGTTAAGCAGAAACT+TGG + chr4_1:76208214-76208233 Msa0573140:CDS 30.0%
ATGACTAACGACATATAGAA+GGG - chr4_1:76208339-76208358 None:intergenic 30.0%
!! TTTATTGGTTTACTTTGCCA+AGG + chr4_1:76208425-76208444 Msa0573140:intron 30.0%
AATATATCTTTCACATGCTC+TGG + chr4_1:76208590-76208609 Msa0573140:intron 30.0%
CGTGCATATGATATTAATGA+TGG - chr4_1:76208629-76208648 None:intergenic 30.0%
GTAAGGAATCAATTAGTGTT+AGG + chr4_1:76208701-76208720 Msa0573140:intron 30.0%
! AATTTTTCCACTTCTCTGTT+CGG + chr4_1:76208724-76208743 Msa0573140:intron 30.0%
!!! TTTTCAGGTTAAAGAATTGG+TGG - chr4_1:76208780-76208799 None:intergenic 30.0%
!!! GAGTTTTCAGGTTAAAGAAT+TGG - chr4_1:76208783-76208802 None:intergenic 30.0%
ACTCAACAATTAACCACATA+AGG - chr4_1:76208884-76208903 None:intergenic 30.0%
AATATTATTGTAAGGGAGAG+AGG + chr4_1:76208935-76208954 Msa0573140:intron 30.0%
!! ATTGTGTGATTCTGCTATTT+TGG + chr4_1:76209008-76209027 Msa0573140:intron 30.0%
!! ACCATTTTTACAACCTTACA+CGG - chr4_1:76209095-76209114 None:intergenic 30.0%
GTTGTAAAAATGGTACATGT+CGG + chr4_1:76209101-76209120 Msa0573140:intron 30.0%
CATTCTAAATGTGGTATTTG+AGG - chr4_1:76209213-76209232 None:intergenic 30.0%
CTCAAATACCACATTTAGAA+TGG + chr4_1:76209211-76209230 Msa0573140:intron 30.0%
! ATTTTCAGATGATCATGGAA+AGG + chr4_1:76209487-76209506 Msa0573140:intron 30.0%
AGCTAAAAATGATAACAGGT+TGG - chr4_1:76209518-76209537 None:intergenic 30.0%
CTGAAGCTAAAAATGATAAC+AGG - chr4_1:76209522-76209541 None:intergenic 30.0%
ATTCACCAGATCCAATATAA+CGG - chr4_1:76209976-76209995 None:intergenic 30.0%
!!! TGAGCGATGCTTTATTTTTT+TGG + chr4_1:76210005-76210024 Msa0573140:intron 30.0%
TATCATAATGATTGATGAGC+AGG + chr4_1:76210151-76210170 Msa0573140:CDS 30.0%
!!! ATAACTCTTGTTGGTTTTCT+TGG + chr4_1:76210487-76210506 Msa0573140:intron 30.0%
! AAAAGTCTCTTGTTTGACTT+TGG + chr4_1:76210624-76210643 Msa0573140:intron 30.0%
AATGAATAACCTCAAAGACA+TGG + chr4_1:76210721-76210740 Msa0573140:CDS 30.0%
GGAATATCATAAGCTGAAAT+TGG + chr4_1:76211160-76211179 Msa0573140:CDS 30.0%
!!! ATTCTTTATTTTCTTGTCCC+TGG + chr4_1:76211236-76211255 Msa0573140:CDS 30.0%
ATCAATATGTATGTGTGTGT+AGG + chr4_1:76211388-76211407 Msa0573140:intron 30.0%
TTGCAGATTAAAGTAAGAGA+AGG + chr4_1:76211573-76211592 Msa0573140:intron 30.0%
AGATTAAAGTAAGAGAAGGT+GGG + chr4_1:76211577-76211596 Msa0573140:intron 30.0%
AATGTTGTTAAGAAACCTGT+TGG + chr4_1:76211627-76211646 Msa0573140:CDS 30.0%
GAGATTAATGGTAATTGAAC+AGG - chr4_1:76211877-76211896 None:intergenic 30.0%
! TGGAAAATTTTACCTTCACA+GGG - chr4_1:76212023-76212042 None:intergenic 30.0%
! ATGGAAAATTTTACCTTCAC+AGG - chr4_1:76212024-76212043 None:intergenic 30.0%
ATATTGGGAAGATACAATGT+TGG - chr4_1:76212197-76212216 None:intergenic 30.0%
CATTGTATCTTCCCAATATT+TGG + chr4_1:76212198-76212217 Msa0573140:intron 30.0%
!!! GCATGTTTTAAAGTTTGCAT+TGG + chr4_1:76212221-76212240 Msa0573140:intron 30.0%
ATGTCCTGGAAATTTAGTTA+TGG - chr4_1:76212355-76212374 None:intergenic 30.0%
ATAACTAAATTTCCAGGACA+TGG + chr4_1:76212354-76212373 Msa0573140:intron 30.0%
TGAACTTGTCAATCAAATAG+AGG + chr4_1:76212399-76212418 Msa0573140:CDS 30.0%
! TTTTAGCAAACCTTATGCAT+AGG - chr4_1:76212451-76212470 None:intergenic 30.0%
!! AAGGTTTGCTAAAATGAATC+TGG + chr4_1:76212457-76212476 Msa0573140:intron 30.0%
!! AATGTGATGTTATTGGTCTT+TGG + chr4_1:76212499-76212518 Msa0573140:intron 30.0%
TGTAAGTTAGATTCAAGATG+TGG + chr4_1:76212547-76212566 Msa0573140:intron 30.0%
! ATCAAATTAAGTGCTTTGAG+AGG + chr4_1:76212570-76212589 Msa0573140:CDS 30.0%
TCATGAAATTCAACAACTGA+AGG + chr4_1:76212607-76212626 Msa0573140:CDS 30.0%
TGTTTCAGCTGCAAAAATTT+CGG + chr4_1:76212972-76212991 Msa0573140:intron 30.0%
GATAGTGTAGTTCAATTGAA+AGG + chr4_1:76213049-76213068 Msa0573140:CDS 30.0%
TGTAGTTCAATTGAAAGGAA+GGG + chr4_1:76213054-76213073 Msa0573140:CDS 30.0%
! TAAACATTAATTCGGTGACA+AGG - chr4_1:76213111-76213130 None:intergenic 30.0%
GTCACCGAATTAATGTTTAA+TGG + chr4_1:76213112-76213131 Msa0573140:CDS 30.0%
!! ATCATTAAAAGTGCCTAATG+GGG - chr4_1:76213229-76213248 None:intergenic 30.0%
!! GATCATTAAAAGTGCCTAAT+GGG - chr4_1:76213230-76213249 None:intergenic 30.0%
!! AGATCATTAAAAGTGCCTAA+TGG - chr4_1:76213231-76213250 None:intergenic 30.0%
TGGTATAAAACAACTTGCAA+GGG - chr4_1:76213274-76213293 None:intergenic 30.0%
TTGGTATAAAACAACTTGCA+AGG - chr4_1:76213275-76213294 None:intergenic 30.0%
! TGATGGATGTAATATACTCT+TGG + chr4_1:76213527-76213546 Msa0573140:CDS 30.0%
TGTAATATACTCTTGGTCAA+AGG + chr4_1:76213534-76213553 Msa0573140:CDS 30.0%
AAACAACTTAAAAGTGGACA+AGG - chr4_1:76213589-76213608 None:intergenic 30.0%
TCAAGCAAACAACTTAAAAG+TGG - chr4_1:76213595-76213614 None:intergenic 30.0%
AAGTTGTTTGCTTGATTTCT+TGG + chr4_1:76213600-76213619 Msa0573140:intron 30.0%
AGTTGTTTGCTTGATTTCTT+GGG + chr4_1:76213601-76213620 Msa0573140:intron 30.0%
ATATGAATAACAACTCATCC+AGG - chr4_1:76213640-76213659 None:intergenic 30.0%
TTCTTCTATACCACTTGTTT+GGG + chr4_1:76213686-76213705 Msa0573140:intron 30.0%
AGAAGAAGATAAAAGGATTG+AGG + chr4_1:76213958-76213977 Msa0573140:intron 30.0%
GAAGAAGATAAAAGGATTGA+GGG + chr4_1:76213959-76213978 Msa0573140:intron 30.0%
TGAAATGTAGTCATTTGTGT+TGG + chr4_1:76214084-76214103 Msa0573140:intron 30.0%
AGCAAAATAATCTCCGTAAT+TGG - chr4_1:76214165-76214184 None:intergenic 30.0%
TTATATGATATTTCAGCGAC+AGG - chr4_1:76214261-76214280 None:intergenic 30.0%
! TTAGGAGCATAAAGAGTATA+TGG - chr4_1:76214284-76214303 None:intergenic 30.0%
!! AGTCTATTTTGAAGACTACT+TGG - chr4_1:76214342-76214361 None:intergenic 30.0%
AATAAGAAACAAGAGACAAG+AGG - chr4_1:76214509-76214528 None:intergenic 30.0%
! TTTTGCAACGTGAAATTACA+AGG - chr4_1:76214670-76214689 None:intergenic 30.0%
!! GTTGATTTGTACTAGTGTTT+AGG + chr4_1:76214741-76214760 Msa0573140:intron 30.0%
!!! GTGATCATTTTTTAGCATTG+CGG + chr4_1:76214845-76214864 Msa0573140:intron 30.0%
! ATATGTCCTTTAGCTTACTT+AGG - chr4_1:76214943-76214962 None:intergenic 30.0%
!!! AATCATATCATAGTTTTGGG+TGG + chr4_1:76215006-76215025 Msa0573140:intron 30.0%
TGATATAAGCTTGAAGTTTG+AGG + chr4_1:76215113-76215132 Msa0573140:intron 30.0%
! AGAGATAACTTTTAACAAGG+AGG - chr4_1:76215232-76215251 None:intergenic 30.0%
!!! TTTGAAGCTTCTAGTTTTCA+CGG + chr4_1:76215630-76215649 Msa0573140:three_prime_UTR 30.0%
AATTTATATGCTCGCAGTAT+GGG + chr4_1:76215724-76215743 Msa0573140:three_prime_UTR 30.0%
GTCCATTAATTAATTCAGAC+AGG + chr4_1:76215799-76215818 Msa0573140:three_prime_UTR 30.0%
CACCTGTCTGAATTAATTAA+TGG - chr4_1:76215804-76215823 None:intergenic 30.0%
CATTAATTAATTCAGACAGG+TGG + chr4_1:76215802-76215821 Msa0573140:three_prime_UTR 30.0%
!! ATTTGCTTTGGAAATGTTCA+AGG - chr4_1:76215945-76215964 None:intergenic 30.0%
! ATTTTCATCTCAGGCGAAAA+TGG + chr4_1:76207319-76207338 Msa0573140:exon 35.0%
TTCGTTGAGGTGTAATTGAT+TGG - chr4_1:76207494-76207513 None:intergenic 35.0%
TGAAATGGATCAAGTGTGAA+AGG - chr4_1:76207581-76207600 None:intergenic 35.0%
AATTGCGTATTCTGCAATTG+CGG - chr4_1:76207675-76207694 None:intergenic 35.0%
AGTCAGGAATTTACAGATGT+AGG + chr4_1:76207776-76207795 Msa0573140:CDS 35.0%
GTCAGGAATTTACAGATGTA+GGG + chr4_1:76207777-76207796 Msa0573140:CDS 35.0%
ATAACAAGACATGTCGCATT+CGG - chr4_1:76207830-76207849 None:intergenic 35.0%
! GACATGTCTTGTTATGACTA+CGG + chr4_1:76207835-76207854 Msa0573140:CDS 35.0%
!!! AAGTTTTGAAGGAAGTTGCT+TGG + chr4_1:76207891-76207910 Msa0573140:CDS 35.0%
!!! AGTTTTGAAGGAAGTTGCTT+GGG + chr4_1:76207892-76207911 Msa0573140:CDS 35.0%
TATATGAAGGATCGTGAAAG+GGG + chr4_1:76207935-76207954 Msa0573140:CDS 35.0%
TTTACCACCTGCTATTAAGA+TGG + chr4_1:76207985-76208004 Msa0573140:CDS 35.0%
AAAACCATCTTAATAGCAGG+TGG - chr4_1:76207992-76208011 None:intergenic 35.0%
GGAAAAACATAATGCTGCAA+CGG - chr4_1:76208115-76208134 None:intergenic 35.0%
! TTAAGCAGAAACTTGGTGAA+GGG + chr4_1:76208221-76208240 Msa0573140:CDS 35.0%
GGTAAATCGAATGGAAGATT+TGG + chr4_1:76208250-76208269 Msa0573140:CDS 35.0%
TCGAATGGAAGATTTGGAAA+AGG + chr4_1:76208256-76208275 Msa0573140:CDS 35.0%
AATGGAAGATTTGGAAAAGG+TGG + chr4_1:76208259-76208278 Msa0573140:CDS 35.0%
GATGACTAACGACATATAGA+AGG - chr4_1:76208340-76208359 None:intergenic 35.0%
!! CTTGTTGTTGAATGTTGCTT+GGG + chr4_1:76208557-76208576 Msa0573140:intron 35.0%
! TGAATGTTGCTTGGGTATTT+CGG + chr4_1:76208565-76208584 Msa0573140:intron 35.0%
! ATCTTGAATGCAGAGTTTTC+AGG - chr4_1:76208795-76208814 None:intergenic 35.0%
! TTTTCCTTGGACGAGTTAAT+TGG + chr4_1:76208831-76208850 Msa0573140:intron 35.0%
!!! TGTGATTCTGCTATTTTGGT+AGG + chr4_1:76209012-76209031 Msa0573140:intron 35.0%
GGGTAGAATCACAAATTGTT+CGG + chr4_1:76209054-76209073 Msa0573140:intron 35.0%
TCTGCACAACATCAAAAGAA+TGG - chr4_1:76209128-76209147 None:intergenic 35.0%
!!! GTTTTTAAGTAACCGGATCA+TGG - chr4_1:76209172-76209191 None:intergenic 35.0%
AGAGCAATAAAATAGTGTGG+AGG - chr4_1:76209443-76209462 None:intergenic 35.0%
! ATTCTTTGATGACAGGAAGA+AGG - chr4_1:76209734-76209753 None:intergenic 35.0%
TCTTCCTGTCATCAAAGAAT+TGG + chr4_1:76209734-76209753 Msa0573140:CDS 35.0%
! TCAACCAATTCTTTGATGAC+AGG - chr4_1:76209741-76209760 None:intergenic 35.0%
! ATTGGTTGAGCTTCTTTTTC+AGG + chr4_1:76209752-76209771 Msa0573140:CDS 35.0%
!! TTTTCAGGAAGGTCTTGTAA+AGG + chr4_1:76209767-76209786 Msa0573140:CDS 35.0%
! GCTTTTCTACAGTTTGCAAT+GGG + chr4_1:76209887-76209906 Msa0573140:intron 35.0%
! TGCAATGGGTTTAAATATGC+CGG + chr4_1:76209901-76209920 Msa0573140:CDS 35.0%
TATTCACTGCTGTTAAGAAG+TGG + chr4_1:76209936-76209955 Msa0573140:CDS 35.0%
ATTCACTGCTGTTAAGAAGT+GGG + chr4_1:76209937-76209956 Msa0573140:CDS 35.0%
TGGATCTGGTGAATATATAC+AGG + chr4_1:76209982-76210001 Msa0573140:CDS 35.0%
GATATGTACCTTTAGATGAG+TGG + chr4_1:76210089-76210108 Msa0573140:intron 35.0%
TCTGTTCATACGCATATGAA+GGG - chr4_1:76210373-76210392 None:intergenic 35.0%
TTCTGTTCATACGCATATGA+AGG - chr4_1:76210374-76210393 None:intergenic 35.0%
!!! TGGTAATTCCTTTTTTCACG+CGG + chr4_1:76210507-76210526 Msa0573140:intron 35.0%
! TCTCTTGTTTGACTTTGGAT+GGG + chr4_1:76210629-76210648 Msa0573140:intron 35.0%
! TAACCTCAAAGACATGGTTT+TGG + chr4_1:76210727-76210746 Msa0573140:CDS 35.0%
! AACCTCAAAGACATGGTTTT+GGG + chr4_1:76210728-76210747 Msa0573140:CDS 35.0%
AATGTACTAACTAAAGGAGC+AGG - chr4_1:76210758-76210777 None:intergenic 35.0%
CTCCTTTAGTTAGTACATTC+AGG + chr4_1:76210759-76210778 Msa0573140:CDS 35.0%
AGCCTGAATGTACTAACTAA+AGG - chr4_1:76210764-76210783 None:intergenic 35.0%
CAGTGCACAAAATACAAATC+AGG - chr4_1:76210914-76210933 None:intergenic 35.0%
TATTGTGTAGGCTGAAGTAT+CGG + chr4_1:76211139-76211158 Msa0573140:intron 35.0%
GTTATCGTTTATCATTGGTG+TGG + chr4_1:76211276-76211295 Msa0573140:intron 35.0%
CATTGGTGTGGAATTAAGTT+TGG + chr4_1:76211288-76211307 Msa0573140:intron 35.0%
CAGATTAAAGTAAGAGAAGG+TGG + chr4_1:76211576-76211595 Msa0573140:intron 35.0%
ACTTTACTTCATTGTTCACC+TGG + chr4_1:76211666-76211685 Msa0573140:CDS 35.0%
! ATACTGTTTTCGTTTGAACC+AGG - chr4_1:76211687-76211706 None:intergenic 35.0%
TTACTAAGGGCAGAGATTAA+TGG - chr4_1:76211889-76211908 None:intergenic 35.0%
CAATTTATGACAGCTGAGTA+TGG - chr4_1:76212043-76212062 None:intergenic 35.0%
TACTCAGCTGTCATAAATTG+TGG + chr4_1:76212043-76212062 Msa0573140:intron 35.0%
ATGCTATCAAAATTAAGGGG+TGG + chr4_1:76212080-76212099 Msa0573140:intron 35.0%
GTTTGATCATCCTATGCATA+AGG + chr4_1:76212438-76212457 Msa0573140:CDS 35.0%
!! TAACTTACAGCAAAGTGTTG+TGG - chr4_1:76212536-76212555 None:intergenic 35.0%
AACAACTGAAGGCAAAAATG+CGG + chr4_1:76212618-76212637 Msa0573140:CDS 35.0%
TGTAGTAAATAATGAGGCCT+AGG - chr4_1:76212665-76212684 None:intergenic 35.0%
AGTTGAAGTATGGAACTGAA+TGG + chr4_1:76212707-76212726 Msa0573140:intron 35.0%
GTTGAAGTATGGAACTGAAT+GGG + chr4_1:76212708-76212727 Msa0573140:intron 35.0%
ACAACTTAACATTTGATGGG+AGG + chr4_1:76212795-76212814 Msa0573140:intron 35.0%
GTTTCAGCTGCAAAAATTTC+GGG + chr4_1:76212973-76212992 Msa0573140:intron 35.0%
GTGTAGTTCAATTGAAAGGA+AGG + chr4_1:76213053-76213072 Msa0573140:CDS 35.0%
TGCTCAGATGATTTCTCTAT+TGG - chr4_1:76213294-76213313 None:intergenic 35.0%
AGTATGTCGAATCAACAGTA+AGG + chr4_1:76213497-76213516 Msa0573140:CDS 35.0%
CTTCTTCTATACCACTTGTT+TGG + chr4_1:76213685-76213704 Msa0573140:intron 35.0%
TGGTTTGATTGTTAGCTGTT+TGG + chr4_1:76213787-76213806 Msa0573140:intron 35.0%
TGATTGTTAGCTGTTTGGAT+TGG + chr4_1:76213792-76213811 Msa0573140:intron 35.0%
AATATAGCCTTTGACATTCC+AGG + chr4_1:76213934-76213953 Msa0573140:intron 35.0%
TCCAGGTAGAAGAAGATAAA+AGG + chr4_1:76213951-76213970 Msa0573140:intron 35.0%
! TCCTTTTATCTTCTTCTACC+TGG - chr4_1:76213955-76213974 None:intergenic 35.0%
! ATATATAAGGGCATGCTCAA+GGG - chr4_1:76214031-76214050 None:intergenic 35.0%
! TATATATAAGGGCATGCTCA+AGG - chr4_1:76214032-76214051 None:intergenic 35.0%
TAATCTCCGTAATTGGTTAG+AGG - chr4_1:76214158-76214177 None:intergenic 35.0%
TAGTATCACAATCAACACAG+AGG - chr4_1:76214365-76214384 None:intergenic 35.0%
AAATGAGCGGTTATTTGTAC+TGG + chr4_1:76214465-76214484 Msa0573140:intron 35.0%
! TTTTGAATCAGGTAACCACA+TGG + chr4_1:76214621-76214640 Msa0573140:intron 35.0%
TGTAGAGCTCAGATTATCAA+GGG - chr4_1:76214812-76214831 None:intergenic 35.0%
TTGTAGAGCTCAGATTATCA+AGG - chr4_1:76214813-76214832 None:intergenic 35.0%
GTTTGACCTAAGTAAGCTAA+AGG + chr4_1:76214934-76214953 Msa0573140:intron 35.0%
!!! TATCATAGTTTTGGGTGGTT+TGG + chr4_1:76215011-76215030 Msa0573140:intron 35.0%
TTGTTCTTCTGCAGACTATT+CGG + chr4_1:76215475-76215494 Msa0573140:three_prime_UTR 35.0%
CAGACTATTCGGAATATTCT+TGG + chr4_1:76215486-76215505 Msa0573140:three_prime_UTR 35.0%
TCTTGTAATGGTATGTGCAA+TGG + chr4_1:76215578-76215597 Msa0573140:three_prime_UTR 35.0%
ATTGGAACGTGAAAAAAGGT+TGG + chr4_1:76215663-76215682 Msa0573140:three_prime_UTR 35.0%
CAATTTATATGCTCGCAGTA+TGG + chr4_1:76215723-76215742 Msa0573140:three_prime_UTR 35.0%
CCTAATGATTATACCACACT+AGG - chr4_1:76215780-76215799 None:intergenic 35.0%
CCTAGTGTGGTATAATCATT+AGG + chr4_1:76215777-76215796 Msa0573140:three_prime_UTR 35.0%
! CAGCAGAACAAAATTTGCTT+TGG - chr4_1:76215957-76215976 None:intergenic 35.0%
ACTTAGAATAGTGATGCCAA+TGG + chr4_1:76216018-76216037 Msa0573140:three_prime_UTR 35.0%
CTTAGAATAGTGATGCCAAT+GGG + chr4_1:76216019-76216038 Msa0573140:three_prime_UTR 35.0%
AACCACAGAGAAACGAAGTT+AGG + chr4_1:76207253-76207272 Msa0573140:five_prime_UTR 40.0%
ACCACAGAGAAACGAAGTTA+GGG + chr4_1:76207254-76207273 Msa0573140:five_prime_UTR 40.0%
! TCCGCTCAAATTTTCATCTC+AGG + chr4_1:76207310-76207329 Msa0573140:five_prime_UTR 40.0%
GCCTGAGATGAAAATTTGAG+CGG - chr4_1:76207314-76207333 None:intergenic 40.0%
!!! TCTGAACTGCGGCATTTTTT+TGG - chr4_1:76207443-76207462 None:intergenic 40.0%
AAGTGATTCGTCTTTCGTTG+AGG - chr4_1:76207507-76207526 None:intergenic 40.0%
ACGAAAGACGAATCACTTCA+CGG + chr4_1:76207509-76207528 Msa0573140:CDS 40.0%
!! GAAAGGATAGGTTTTAGCCA+TGG - chr4_1:76207564-76207583 None:intergenic 40.0%
TGGATCAAGTGTGAAAGGAT+AGG - chr4_1:76207576-76207595 None:intergenic 40.0%
! TTCTGCAATTGCGGTTTTTC+CGG - chr4_1:76207666-76207685 None:intergenic 40.0%
!!! TCGTGGTTCTGAAGTTTTGA+AGG + chr4_1:76207880-76207899 Msa0573140:CDS 40.0%
TCAGTGTAAACTACGTGACA+GGG - chr4_1:76208079-76208098 None:intergenic 40.0%
ATCAGTGTAAACTACGTGAC+AGG - chr4_1:76208080-76208099 None:intergenic 40.0%
! GTTAAGCAGAAACTTGGTGA+AGG + chr4_1:76208220-76208239 Msa0573140:CDS 40.0%
ATTCAACAACAAGCTCTACG+AGG - chr4_1:76208550-76208569 None:intergenic 40.0%
!! GCTTGTTGTTGAATGTTGCT+TGG + chr4_1:76208556-76208575 Msa0573140:intron 40.0%
TATCATATGCACGTATGCTC+TGG + chr4_1:76208636-76208655 Msa0573140:intron 40.0%
TTTAGTACGTGGACCTTATG+TGG + chr4_1:76208868-76208887 Msa0573140:intron 40.0%
TATTGTAAGGGAGAGAGGAA+TGG + chr4_1:76208940-76208959 Msa0573140:intron 40.0%
ATTGTAAGGGAGAGAGGAAT+GGG + chr4_1:76208941-76208960 Msa0573140:intron 40.0%
ATTTGTGATTCTACCCATGC+TGG - chr4_1:76209050-76209069 None:intergenic 40.0%
GAATCACAAATTGTTCGGAG+CGG + chr4_1:76209059-76209078 Msa0573140:intron 40.0%
GCCGTGTAAGGTTGTAAAAA+TGG + chr4_1:76209091-76209110 Msa0573140:intron 40.0%
TTTGATGTTGTGCAGAGTTG+TGG + chr4_1:76209132-76209151 Msa0573140:intron 40.0%
!!! CAGCGTCGTTTTTAAGTAAC+CGG - chr4_1:76209179-76209198 None:intergenic 40.0%
! CCACATTTAGAATGGCTGAA+CGG + chr4_1:76209219-76209238 Msa0573140:intron 40.0%
!! GTGGGTTAGAAACTGACAAT+CGG - chr4_1:76209247-76209266 None:intergenic 40.0%
AAACAGGGTAGAGAGCAAAA+CGG - chr4_1:76209339-76209358 None:intergenic 40.0%
ACTTGACTTCAATTCCCAAG+AGG + chr4_1:76209581-76209600 Msa0573140:CDS 40.0%
CTTCAATTCCCAAGAGGAAA+AGG + chr4_1:76209587-76209606 Msa0573140:CDS 40.0%
! CACTGTATCCTTTTCCTCTT+GGG - chr4_1:76209598-76209617 None:intergenic 40.0%
! GGAATTGCTGTTCATCATTC+TGG + chr4_1:76209708-76209727 Msa0573140:CDS 40.0%
!!! GTTGAGCTTCTTTTTCAGGA+AGG + chr4_1:76209756-76209775 Msa0573140:CDS 40.0%
TACTGTCTCAGTAGCAAAGA+GGG - chr4_1:76209793-76209812 None:intergenic 40.0%
TTACTGTCTCAGTAGCAAAG+AGG - chr4_1:76209794-76209813 None:intergenic 40.0%
! CGCTTTTCTACAGTTTGCAA+TGG + chr4_1:76209886-76209905 Msa0573140:intron 40.0%
! GTGAATACGACAGTTTTTGC+CGG - chr4_1:76209923-76209942 None:intergenic 40.0%
GGTGATAGTCACCGTTATAT+TGG + chr4_1:76209962-76209981 Msa0573140:CDS 40.0%
AGTCACCGTTATATTGGATC+TGG + chr4_1:76209968-76209987 Msa0573140:CDS 40.0%
TGTACCTTTAGATGAGTGGA+AGG + chr4_1:76210093-76210112 Msa0573140:intron 40.0%
GTACCTTTAGATGAGTGGAA+GGG + chr4_1:76210094-76210113 Msa0573140:intron 40.0%
ATTTCATTATGCTGCATCGG+AGG - chr4_1:76210210-76210229 None:intergenic 40.0%
TATGATAGACCCGAAGAACA+AGG + chr4_1:76210289-76210308 Msa0573140:intron 40.0%
AGGAAATCTCCTTGTTCTTC+GGG - chr4_1:76210301-76210320 None:intergenic 40.0%
CAGGAAATCTCCTTGTTCTT+CGG - chr4_1:76210302-76210321 None:intergenic 40.0%
!!! AATTCCTTTTTTCACGCGGT+AGG + chr4_1:76210511-76210530 Msa0573140:intron 40.0%
! GTCTCTTGTTTGACTTTGGA+TGG + chr4_1:76210628-76210647 Msa0573140:intron 40.0%
TACCCAAAACCATGTCTTTG+AGG - chr4_1:76210733-76210752 None:intergenic 40.0%
AATTCAGACCTTACCTGATG+TGG + chr4_1:76210962-76210981 Msa0573140:intron 40.0%
ATTCAGACCTTACCTGATGT+GGG + chr4_1:76210963-76210982 Msa0573140:intron 40.0%
CTTACCTGATGTGGGAAAAA+GGG + chr4_1:76210971-76210990 Msa0573140:CDS 40.0%
GTTGTTAAGAAACCTGTTGG+CGG + chr4_1:76211630-76211649 Msa0573140:CDS 40.0%
TCAACTATATAACCGCCAAC+AGG - chr4_1:76211645-76211664 None:intergenic 40.0%
AGAGAAAGGTGAAATGCATG+TGG + chr4_1:76211737-76211756 Msa0573140:CDS 40.0%
AAGTAGCATGACGGTCAAAA+TGG - chr4_1:76211770-76211789 None:intergenic 40.0%
AAATCCCTGAAGTAGCATGA+CGG - chr4_1:76211779-76211798 None:intergenic 40.0%
! TGACTGCTTCCTTTTGCATT+AGG + chr4_1:76211849-76211868 Msa0573140:intron 40.0%
TCTCTGCCCTTAGTAAACTA+AGG + chr4_1:76211893-76211912 Msa0573140:CDS 40.0%
TATATGTACCTCCTGATCTC+CGG + chr4_1:76211917-76211936 Msa0573140:CDS 40.0%
!! TTAAGCTTTGGAAGACCTTG+AGG - chr4_1:76212000-76212019 None:intergenic 40.0%
ACAACTGAAGGCAAAAATGC+GGG + chr4_1:76212619-76212638 Msa0573140:CDS 40.0%
GCTAACTAGGAGTTGAAGTA+TGG + chr4_1:76212697-76212716 Msa0573140:intron 40.0%
ATGCACTCGAACATTTGTCA+TGG - chr4_1:76212839-76212858 None:intergenic 40.0%
! TTCATTTTCCCTTCCCCATT+AGG + chr4_1:76213213-76213232 Msa0573140:intron 40.0%
!! TAAAAGTGCCTAATGGGGAA+GGG - chr4_1:76213224-76213243 None:intergenic 40.0%
!! TTAAAAGTGCCTAATGGGGA+AGG - chr4_1:76213225-76213244 None:intergenic 40.0%
GATAGAGCACGAATGCAAAT+TGG + chr4_1:76213459-76213478 Msa0573140:intron 40.0%
AACAGTAAGGCCATTCTTGA+TGG + chr4_1:76213510-76213529 Msa0573140:CDS 40.0%
TTGGGTGAAGTTTCTATTCC+TGG + chr4_1:76213619-76213638 Msa0573140:intron 40.0%
AACTAGACAACCCAAACAAG+TGG - chr4_1:76213699-76213718 None:intergenic 40.0%
! TAGCTGTTTGGATTGGAAGT+TGG + chr4_1:76213799-76213818 Msa0573140:intron 40.0%
! AGCTGTTTGGATTGGAAGTT+GGG + chr4_1:76213800-76213819 Msa0573140:intron 40.0%
TCTTCTACCTGGAATGTCAA+AGG - chr4_1:76213944-76213963 None:intergenic 40.0%
TCTACCACATGTAACAACCA+TGG - chr4_1:76214113-76214132 None:intergenic 40.0%
AAGTATGCATGCATACACAC+TGG + chr4_1:76214235-76214254 Msa0573140:intron 40.0%
TTTGCATAAATCCTGCGTCT+AGG - chr4_1:76214424-76214443 None:intergenic 40.0%
TTTCATCCACTCATGAACCA+AGG - chr4_1:76214447-76214466 None:intergenic 40.0%
CATGAGTGGATGAAAATGAG+CGG + chr4_1:76214452-76214471 Msa0573140:intron 40.0%
ATCAGCAAAACTTGATCCCT+AGG - chr4_1:76214537-76214556 None:intergenic 40.0%
TCAAATGACTGACATCTTCG+AGG + chr4_1:76214562-76214581 Msa0573140:CDS 40.0%
CAAATGACTGACATCTTCGA+GGG + chr4_1:76214563-76214582 Msa0573140:CDS 40.0%
AAATGACTGACATCTTCGAG+GGG + chr4_1:76214564-76214583 Msa0573140:CDS 40.0%
! GCTTGACGAGTTTTTGAATC+AGG + chr4_1:76214610-76214629 Msa0573140:CDS 40.0%
!!! CCACATGGTTTTATCTTCGA+CGG + chr4_1:76214636-76214655 Msa0573140:intron 40.0%
CAAAAATAATACCCCGTCGA+AGG - chr4_1:76215434-76215453 None:intergenic 40.0%
CGGAATATTCTTGGTTACTC+TGG + chr4_1:76215495-76215514 Msa0573140:three_prime_UTR 40.0%
ATATTCTTGGTTACTCTGGC+TGG + chr4_1:76215499-76215518 Msa0573140:three_prime_UTR 40.0%
CATTACAAGAGAACCCGAAA+AGG - chr4_1:76215568-76215587 None:intergenic 40.0%
!!! CTTTTCGGGTTCTCTTGTAA+TGG + chr4_1:76215566-76215585 Msa0573140:three_prime_UTR 40.0%
TGCAATGGACAAAATTGTCG+TGG + chr4_1:76215593-76215612 Msa0573140:three_prime_UTR 40.0%
TTTCACGGTGAAAACTGCAT+TGG + chr4_1:76215645-76215664 Msa0573140:three_prime_UTR 40.0%
CTGCATTGGAACGTGAAAAA+AGG + chr4_1:76215659-76215678 Msa0573140:three_prime_UTR 40.0%
GAATGATAGATGACCTAGTG+TGG + chr4_1:76215764-76215783 Msa0573140:three_prime_UTR 40.0%
ACCCTAACTTCGTTTCTCTG+TGG - chr4_1:76207258-76207277 None:intergenic 45.0%
GAGCAGGAATCAACAACACT+CGG + chr4_1:76207359-76207378 Msa0573140:CDS 45.0%
ACTCGGAAAACGAAGTGAAC+CGG + chr4_1:76207376-76207395 Msa0573140:CDS 45.0%
AAAACGAAGTGAACCGGAAC+CGG + chr4_1:76207382-76207401 Msa0573140:CDS 45.0%
! TTTTAGCCATGGTACCGTTG+TGG - chr4_1:76207553-76207572 None:intergenic 45.0%
!! ACAGATGTAGGGTTGATGAC+TGG + chr4_1:76207788-76207807 Msa0573140:CDS 45.0%
ATGACTACGGAGATTCTTCG+TGG + chr4_1:76207848-76207867 Msa0573140:CDS 45.0%
CTTCGTGGAATGTTGTATCG+TGG + chr4_1:76207863-76207882 Msa0573140:CDS 45.0%
!! ATCGTGAAAGGGGTGTTGTA+TGG + chr4_1:76207945-76207964 Msa0573140:CDS 45.0%
!! TCGTGAAAGGGGTGTTGTAT+GGG + chr4_1:76207946-76207965 Msa0573140:CDS 45.0%
ACATAATGCTGCAACGGTGT+CGG - chr4_1:76208109-76208128 None:intergenic 45.0%
! GTTTTTCCTATTGGTGGGAG+TGG + chr4_1:76208127-76208146 Msa0573140:CDS 45.0%
TACAATCCACTCCCACCAAT+AGG - chr4_1:76208136-76208155 None:intergenic 45.0%
!! TGGTGGGAGTGGATTGTATT+TGG + chr4_1:76208138-76208157 Msa0573140:CDS 45.0%
! CAGAAACTTGGTGAAGGGAA+GGG + chr4_1:76208226-76208245 Msa0573140:CDS 45.0%
CGGAGAAGACAAACTTGTGT+TGG + chr4_1:76208744-76208763 Msa0573140:intron 45.0%
ACTGCCAATTAACTCGTCCA+AGG - chr4_1:76208838-76208857 None:intergenic 45.0%
ATTCTACCCATGCTGGAACT+CGG - chr4_1:76209043-76209062 None:intergenic 45.0%
CCGTTCAGCCATTCTAAATG+TGG - chr4_1:76209222-76209241 None:intergenic 45.0%
! CCACTGTATCCTTTTCCTCT+TGG - chr4_1:76209599-76209618 None:intergenic 45.0%
CCAAGAGGAAAAGGATACAG+TGG + chr4_1:76209596-76209615 Msa0573140:CDS 45.0%
ACTCGATAGCAGGTAAGCTT+CGG - chr4_1:76209665-76209684 None:intergenic 45.0%
ACTGCTGTTAAGAAGTGGGA+TGG + chr4_1:76209941-76209960 Msa0573140:CDS 45.0%
TTTAGATGAGTGGAAGGGCT+GGG + chr4_1:76210099-76210118 Msa0573140:intron 45.0%
AATTTGATGAGCCGAGCAGA+AGG + chr4_1:76210803-76210822 Msa0573140:CDS 45.0%
! CCTTTTTCCCACATCAGGTA+AGG - chr4_1:76210973-76210992 None:intergenic 45.0%
CCTTACCTGATGTGGGAAAA+AGG + chr4_1:76210970-76210989 Msa0573140:CDS 45.0%
GGGAGGTAGTCTTTATTCCT+GGG + chr4_1:76211036-76211055 Msa0573140:intron 45.0%
CAAAACAAAACAGATGGCCC+AGG - chr4_1:76211056-76211075 None:intergenic 45.0%
TATCACTTACCAGTCGACCA+GGG - chr4_1:76211256-76211275 None:intergenic 45.0%
TAAGAGAAGGTGGGACAGAT+TGG + chr4_1:76211586-76211605 Msa0573140:CDS 45.0%
AAGAGAAGGTGGGACAGATT+GGG + chr4_1:76211587-76211606 Msa0573140:CDS 45.0%
GCATTTCACCTTTCTCTCCA+GGG - chr4_1:76211734-76211753 None:intergenic 45.0%
TGCATTTCACCTTTCTCTCC+AGG - chr4_1:76211735-76211754 None:intergenic 45.0%
! TTTGACCGTCATGCTACTTC+AGG + chr4_1:76211771-76211790 Msa0573140:intron 45.0%
! TTGACCGTCATGCTACTTCA+GGG + chr4_1:76211772-76211791 Msa0573140:intron 45.0%
GAACAGGGACCTAATGCAAA+AGG - chr4_1:76211861-76211880 None:intergenic 45.0%
!! AAGCATACTCCTTGCTGTTC+AGG + chr4_1:76211957-76211976 Msa0573140:CDS 45.0%
TCCAAAGCTTAACCCTGTGA+AGG + chr4_1:76212008-76212027 Msa0573140:CDS 45.0%
ACCTTCACAGGGTTAAGCTT+TGG - chr4_1:76212012-76212031 None:intergenic 45.0%
AATTAAGGGGTGGCTGTTCT+AGG + chr4_1:76212090-76212109 Msa0573140:intron 45.0%
ATGATGCATAAGGCAGCTCA+AGG - chr4_1:76212257-76212276 None:intergenic 45.0%
AATCTCGAACATCCATGTCC+TGG - chr4_1:76212369-76212388 None:intergenic 45.0%
CCTAGGCAAAGTCAATACCT+GGG - chr4_1:76212648-76212667 None:intergenic 45.0%
TCGCGAGTCTTAAAGAAGCT+TGG + chr4_1:76213013-76213032 Msa0573140:CDS 45.0%
CTGTCTTGAAGCTGTTGTAG+AGG - chr4_1:76213345-76213364 None:intergenic 45.0%
AGCTTCAAGACAGTGCAAGA+AGG + chr4_1:76213352-76213371 Msa0573140:CDS 45.0%
AGAGCACGAATGCAAATTGG+AGG + chr4_1:76213462-76213481 Msa0573140:CDS 45.0%
! GCTGTTTGGATTGGAAGTTG+GGG + chr4_1:76213801-76213820 Msa0573140:intron 45.0%
TGGAAGTTGGGGATTGTAGT+TGG + chr4_1:76213812-76213831 Msa0573140:intron 45.0%
!! GTCATTTGTGTTGGTTGCCA+TGG + chr4_1:76214093-76214112 Msa0573140:intron 45.0%
GTTGCCATGGTTGTTACATG+TGG + chr4_1:76214106-76214125 Msa0573140:intron 45.0%
CCAGAGCCTCTAACCAATTA+CGG + chr4_1:76214149-76214168 Msa0573140:intron 45.0%
TGCTCCTAAACACACACACA+CGG + chr4_1:76214295-76214314 Msa0573140:intron 45.0%
CGCAGGATTTATGCAAACCT+TGG + chr4_1:76214427-76214446 Msa0573140:intron 45.0%
TGCAAACCTTGGTTCATGAG+TGG + chr4_1:76214438-76214457 Msa0573140:intron 45.0%
!! TCTTCGAGGGGAGTATCATT+AGG + chr4_1:76214576-76214595 Msa0573140:CDS 45.0%
!! CTTCGAGGGGAGTATCATTA+GGG + chr4_1:76214577-76214596 Msa0573140:CDS 45.0%
GTATCATTAGGGCAGCTAGA+AGG + chr4_1:76214588-76214607 Msa0573140:CDS 45.0%
CCGTCGAAGATAAAACCATG+TGG - chr4_1:76214639-76214658 None:intergenic 45.0%
CGAAAAGGAATTGAGCGCAT+CGG - chr4_1:76215553-76215572 None:intergenic 45.0%
! CGATGCGCTCAATTCCTTTT+CGG + chr4_1:76215551-76215570 Msa0573140:three_prime_UTR 45.0%
! GATGCGCTCAATTCCTTTTC+GGG + chr4_1:76215552-76215571 Msa0573140:three_prime_UTR 45.0%
! TTAGAGGTGGTTTGGATCAG+CGG - chr4_1:76215692-76215711 None:intergenic 45.0%
! ATGCAGACAAAGGGTTCTGA+AGG - chr4_1:76215849-76215868 None:intergenic 45.0%
TCAGAACCCTTTGTCTGCAT+TGG + chr4_1:76215849-76215868 Msa0573140:three_prime_UTR 45.0%
CAGAACCCTTTGTCTGCATT+GGG + chr4_1:76215850-76215869 Msa0573140:three_prime_UTR 45.0%
AGAACCCTTTGTCTGCATTG+GGG + chr4_1:76215851-76215870 Msa0573140:three_prime_UTR 45.0%
CAATCCCCAATGCAGACAAA+GGG - chr4_1:76215858-76215877 None:intergenic 45.0%
TCAATCCCCAATGCAGACAA+AGG - chr4_1:76215859-76215878 None:intergenic 45.0%
TTTGTCTGCATTGGGGATTG+AGG + chr4_1:76215858-76215877 Msa0573140:three_prime_UTR 45.0%
!!! ATATTAATTTTTTTTTTTTG+TGG + chr4_1:76208369-76208388 Msa0573140:intron 5.0%
!! TAAATAATAAACAAAATTAA+CGG - chr4_1:76208409-76208428 None:intergenic 5.0%
!!! TAATTTTGTTTATTATTTAT+TGG + chr4_1:76208410-76208429 Msa0573140:intron 5.0%
!!! AATTTTATATATCTATTTTT+AGG + chr4_1:76211476-76211495 Msa0573140:intron 5.0%
!!! TTTTTGAATTAAATTATAAA+TGG + chr4_1:76213418-76213437 Msa0573140:intron 5.0%
!!! TTTTGAATTAAATTATAAAT+GGG + chr4_1:76213419-76213438 Msa0573140:intron 5.0%
!! TTTCTATTTATTATATATAA+GGG - chr4_1:76214043-76214062 None:intergenic 5.0%
!!! TTTTCTATTTATTATATATA+AGG - chr4_1:76214044-76214063 None:intergenic 5.0%
AATGGAGCAAGAGCCAGCAA+TGG + chr4_1:76207337-76207356 Msa0573140:exon 50.0%
! GTTGATTCCTGCTCCATTGC+TGG - chr4_1:76207353-76207372 None:intergenic 50.0%
! AACTGCTACTTCGTGAACGC+AGG - chr4_1:76207471-76207490 None:intergenic 50.0%
! TGCAATTGCGGTTTTTCCGG+CGG - chr4_1:76207663-76207682 None:intergenic 50.0%
CTCTGTGGCATTCGACATAG+TGG - chr4_1:76208023-76208042 None:intergenic 50.0%
GTCGAATGCCACAGAGTTTG+CGG + chr4_1:76208027-76208046 Msa0573140:CDS 50.0%
AATCCACTCCGCAAACTCTG+TGG - chr4_1:76208038-76208057 None:intergenic 50.0%
! GCAGAAACTTGGTGAAGGGA+AGG + chr4_1:76208225-76208244 Msa0573140:CDS 50.0%
! AAACTTGGTGAAGGGAAGGG+TGG + chr4_1:76208229-76208248 Msa0573140:CDS 50.0%
GGGAAGGGTGGTAAATCGAA+TGG + chr4_1:76208241-76208260 Msa0573140:CDS 50.0%
! GGAAAAGGTGGTTCTGCTTC+TGG + chr4_1:76208271-76208290 Msa0573140:CDS 50.0%
! AAAGGTGGTTCTGCTTCTGG+TGG + chr4_1:76208274-76208293 Msa0573140:CDS 50.0%
! AAGGTGGTTCTGCTTCTGGT+GGG + chr4_1:76208275-76208294 Msa0573140:CDS 50.0%
GTCTTCTCCGAACAGAGAAG+TGG - chr4_1:76208734-76208753 None:intergenic 50.0%
TAAGGGAGAGAGGAATGGGT+GGG + chr4_1:76208945-76208964 Msa0573140:intron 50.0%
GAATGGGTGGGTATAGACGA+TGG + chr4_1:76208957-76208976 Msa0573140:intron 50.0%
ACAAATTGTTCGGAGCGGCT+GGG + chr4_1:76209064-76209083 Msa0573140:intron 50.0%
TGTGCAGAGTTGTGGTTGAC+AGG + chr4_1:76209140-76209159 Msa0573140:intron 50.0%
CAGAGTTGTGGTTGACAGGT+CGG + chr4_1:76209144-76209163 Msa0573140:intron 50.0%
AGAGTTGTGGTTGACAGGTC+GGG + chr4_1:76209145-76209164 Msa0573140:intron 50.0%
GGCAACATCAACTCGATAGC+AGG - chr4_1:76209675-76209694 None:intergenic 50.0%
! ATGTTGCCACTTCTTCAGCG+AGG + chr4_1:76209687-76209706 Msa0573140:CDS 50.0%
GCAATTCCTCGCTGAAGAAG+TGG - chr4_1:76209696-76209715 None:intergenic 50.0%
CAGCCCTTCCACTCATCTAA+AGG - chr4_1:76210100-76210119 None:intergenic 50.0%
CTTTAGATGAGTGGAAGGGC+TGG + chr4_1:76210098-76210117 Msa0573140:intron 50.0%
CATGCTATTGCTAACGGAGC+AGG - chr4_1:76210321-76210340 None:intergenic 50.0%
ACAGCCTACCGCGTGAAAAA+AGG - chr4_1:76210518-76210537 None:intergenic 50.0%
! GACACCCTTTTTCCCACATC+AGG - chr4_1:76210978-76210997 None:intergenic 50.0%
!! GGGAAAAAGGGTGTCTATGC+TGG + chr4_1:76210983-76211002 Msa0573140:CDS 50.0%
! TAGCCTTGCTTGATGCTGCA+GGG + chr4_1:76211015-76211034 Msa0573140:CDS 50.0%
GGGGAGGTAGTCTTTATTCC+TGG + chr4_1:76211035-76211054 Msa0573140:intron 50.0%
! TTTTCTTGTCCCTGGTCGAC+TGG + chr4_1:76211244-76211263 Msa0573140:CDS 50.0%
CTATCACTTACCAGTCGACC+AGG - chr4_1:76211257-76211276 None:intergenic 50.0%
AGAGAAGGTGGGACAGATTG+GGG + chr4_1:76211588-76211607 Msa0573140:CDS 50.0%
TTTCACCTTTCTCTCCAGGG+CGG - chr4_1:76211731-76211750 None:intergenic 50.0%
ATGCTTTGCCGAGCTTCCAA+GGG - chr4_1:76211943-76211962 None:intergenic 50.0%
TATGCTTTGCCGAGCTTCCA+AGG - chr4_1:76211944-76211963 None:intergenic 50.0%
! CTGGGCAATCGTTTTCCTCA+AGG + chr4_1:76211982-76212001 Msa0573140:CDS 50.0%
!! CCCAGGTATTGACTTTGCCT+AGG + chr4_1:76212645-76212664 Msa0573140:intron 50.0%
GCCTAGGCAAAGTCAATACC+TGG - chr4_1:76212649-76212668 None:intergenic 50.0%
ATCGCCTGTGTCAATCAAGC+AGG - chr4_1:76213083-76213102 None:intergenic 50.0%
CAAGGGCAGCAACTTGATGA+TGG - chr4_1:76213257-76213276 None:intergenic 50.0%
CAGTGCAAGAAGGATAGCAG+AGG + chr4_1:76213362-76213381 Msa0573140:CDS 50.0%
CCGTAATTGGTTAGAGGCTC+TGG - chr4_1:76214152-76214171 None:intergenic 50.0%
CAGACCGTGTGTGTGTGTTT+AGG - chr4_1:76214302-76214321 None:intergenic 50.0%
CATGTAGACATCCTAGACGC+AGG + chr4_1:76214410-76214429 Msa0573140:intron 50.0%
TGCAGTTGGAGAAGCTGACT+TGG + chr4_1:76215380-76215399 Msa0573140:CDS 50.0%
TTCTTGGTTACTCTGGCTGG+TGG + chr4_1:76215502-76215521 Msa0573140:three_prime_UTR 50.0%
TCTTGGTTACTCTGGCTGGT+GGG + chr4_1:76215503-76215522 Msa0573140:three_prime_UTR 50.0%
AGGAATTGAGCGCATCGGAT+GGG - chr4_1:76215548-76215567 None:intergenic 50.0%
AAGGAATTGAGCGCATCGGA+TGG - chr4_1:76215549-76215568 None:intergenic 50.0%
!! GGTTCTGAAGGTAGACGAAC+AGG - chr4_1:76215837-76215856 None:intergenic 50.0%
TGCATTGGGGATTGAGGAGT+GGG + chr4_1:76215864-76215883 Msa0573140:three_prime_UTR 50.0%
GTGATGCCAATGGGAATCAG+AGG + chr4_1:76216028-76216047 Msa0573140:three_prime_UTR 50.0%
ACCATGCCTCTGATTCCCAT+TGG - chr4_1:76216037-76216056 None:intergenic 50.0%
CTCTCCAACCCTCTCCACAA+CGG + chr4_1:76207536-76207555 Msa0573140:CDS 55.0%
CCATGGTACCGTTGTGGAGA+GGG - chr4_1:76207547-76207566 None:intergenic 55.0%
! AATTGCGGTTTTTCCGGCGG+AGG - chr4_1:76207660-76207679 None:intergenic 55.0%
ATGCCACAGAGTTTGCGGAG+TGG + chr4_1:76208032-76208051 Msa0573140:CDS 55.0%
GTAAGGGAGAGAGGAATGGG+TGG + chr4_1:76208944-76208963 Msa0573140:intron 55.0%
GTCTTGCCGAGTTCCAGCAT+GGG + chr4_1:76209034-76209053 Msa0573140:intron 55.0%
CACAAATTGTTCGGAGCGGC+TGG + chr4_1:76209063-76209082 Msa0573140:intron 55.0%
CAAATTGTTCGGAGCGGCTG+GGG + chr4_1:76209065-76209084 Msa0573140:intron 55.0%
GGGTAGAGAGCAAAACGGCA+TGG - chr4_1:76209334-76209353 None:intergenic 55.0%
GTCGTGGCAAAGATGAGCGT+GGG + chr4_1:76210123-76210142 Msa0573140:CDS 55.0%
!! CAGTGAACTGGCCTTCTGCT+CGG - chr4_1:76210817-76210836 None:intergenic 55.0%
AGCAGAAGGCCAGTTCACTG+CGG + chr4_1:76210817-76210836 Msa0573140:CDS 55.0%
TCACGTGTTCCGCAGTGAAC+TGG - chr4_1:76210829-76210848 None:intergenic 55.0%
!! AAGGGTGTCTATGCTGGAGC+AGG + chr4_1:76210989-76211008 Msa0573140:CDS 55.0%
! GTAGCCTTGCTTGATGCTGC+AGG + chr4_1:76211014-76211033 Msa0573140:CDS 55.0%
AGCCTTGCTTGATGCTGCAG+GGG + chr4_1:76211016-76211035 Msa0573140:CDS 55.0%
TTCACCTTTCTCTCCAGGGC+GGG - chr4_1:76211730-76211749 None:intergenic 55.0%
!! ACTCCTTGCTGTTCAGGAGC+TGG + chr4_1:76211963-76211982 Msa0573140:CDS 55.0%
!! CTCCTTGCTGTTCAGGAGCT+GGG + chr4_1:76211964-76211983 Msa0573140:CDS 55.0%
GCAGCCTGCTTGATTGACAC+AGG + chr4_1:76213076-76213095 Msa0573140:CDS 55.0%
AGCAGCACGCAACTGGAAAG+AGG - chr4_1:76215355-76215374 None:intergenic 55.0%
CAGCGAGTGAAAGCCTTCGA+CGG + chr4_1:76215418-76215437 Msa0573140:CDS 55.0%
AGCGAGTGAAAGCCTTCGAC+GGG + chr4_1:76215419-76215438 Msa0573140:CDS 55.0%
CTTGGTTACTCTGGCTGGTG+GGG + chr4_1:76215504-76215523 Msa0573140:three_prime_UTR 55.0%
CTGCATTGGGGATTGAGGAG+TGG + chr4_1:76215863-76215882 Msa0573140:three_prime_UTR 55.0%
GCATTGGGGATTGAGGAGTG+GGG + chr4_1:76215865-76215884 Msa0573140:three_prime_UTR 55.0%
GCCAATGGGAATCAGAGGCA+TGG + chr4_1:76216033-76216052 Msa0573140:three_prime_UTR 55.0%
GCAAGAGCCAGCAATGGAGC+AGG + chr4_1:76207343-76207362 Msa0573140:CDS 60.0%
!! TGAAGAAGTGTCGCCGCCGT+CGG - chr4_1:76207417-76207436 None:intergenic 60.0%
! CGCAGGTGCGTTCTGAACTG+CGG - chr4_1:76207454-76207473 None:intergenic 60.0%
GGTACCGTTGTGGAGAGGGT+TGG - chr4_1:76207543-76207562 None:intergenic 60.0%
CCCTCTCCACAACGGTACCA+TGG + chr4_1:76207544-76207563 Msa0573140:CDS 60.0%
GCCATGGTACCGTTGTGGAG+AGG - chr4_1:76207548-76207567 None:intergenic 60.0%
GGTCTTGCCGAGTTCCAGCA+TGG + chr4_1:76209033-76209052 Msa0573140:intron 60.0%
GACAGGTCGGGTCCATGATC+CGG + chr4_1:76209157-76209176 Msa0573140:intron 60.0%
CGTCGTGGCAAAGATGAGCG+TGG + chr4_1:76210122-76210141 Msa0573140:CDS 60.0%
CTCCCCTGCAGCATCAAGCA+AGG - chr4_1:76211021-76211040 None:intergenic 60.0%
CTTGCTTGATGCTGCAGGGG+AGG + chr4_1:76211019-76211038 Msa0573140:CDS 60.0%
AAGGTGGGACAGATTGGGGC+TGG + chr4_1:76211592-76211611 Msa0573140:CDS 60.0%
AGGTGGGACAGATTGGGGCT+GGG + chr4_1:76211593-76211612 Msa0573140:CDS 60.0%
TCACCTTTCTCTCCAGGGCG+GGG - chr4_1:76211729-76211748 None:intergenic 60.0%
ATCTCCGGCCCTTGGAAGCT+CGG + chr4_1:76211932-76211951 Msa0573140:CDS 60.0%
TTTGCCGAGCTTCCAAGGGC+CGG - chr4_1:76211939-76211958 None:intergenic 60.0%
TGCCCAGCTCCTGAACAGCA+AGG - chr4_1:76211969-76211988 None:intergenic 60.0%
GGCAAAAATGCGGGACTCCC+AGG + chr4_1:76212628-76212647 Msa0573140:CDS 60.0%
CATCAGCAGCAGCACGCAAC+TGG - chr4_1:76215362-76215381 None:intergenic 60.0%
! CGTGCTGCTGCTGATGCAGT+TGG + chr4_1:76215366-76215385 Msa0573140:CDS 60.0%
GCGAGTGAAAGCCTTCGACG+GGG + chr4_1:76215420-76215439 Msa0573140:CDS 60.0%
GCGCATCGGATGGGATGTGA+AGG - chr4_1:76215539-76215558 None:intergenic 60.0%
! GAGGTGGTTTGGATCAGCGG+CGG - chr4_1:76215689-76215708 None:intergenic 60.0%
GTCTCTGCTCACACCTCCGC+CGG + chr4_1:76207644-76207663 Msa0573140:CDS 65.0%
GGTGGGACAGATTGGGGCTG+GGG + chr4_1:76211594-76211613 Msa0573140:CDS 65.0%
CTTTCTCTCCAGGGCGGGGT+GGG - chr4_1:76211725-76211744 None:intergenic 65.0%
ACCTCCTGATCTCCGGCCCT+TGG + chr4_1:76211924-76211943 Msa0573140:CDS 65.0%
TCCAAGGGCCGGAGATCAGG+AGG - chr4_1:76211928-76211947 None:intergenic 65.0%
GCTTCCAAGGGCCGGAGATC+AGG - chr4_1:76211931-76211950 None:intergenic 65.0%
GGTTACTCTGGCTGGTGGGG+CGG + chr4_1:76215507-76215526 Msa0573140:three_prime_UTR 65.0%
!! TCGGCGGTGGACACCGGTTC+CGG - chr4_1:76207398-76207417 None:intergenic 70.0%
GAACCGGTGTCCACCGCCGA+CGG + chr4_1:76207398-76207417 Msa0573140:CDS 70.0%
!! AGAAGTGTCGCCGCCGTCGG+CGG - chr4_1:76207414-76207433 None:intergenic 70.0%
CGGCTGGGGTCTGCCGTGTA+AGG + chr4_1:76209079-76209098 Msa0573140:intron 70.0%
! AGTGGAAGGGCTGGGCGTCG+TGG + chr4_1:76210107-76210126 Msa0573140:CDS 70.0%
! GGGCGGGGTGGGCATGGTTT+TGG - chr4_1:76211714-76211733 None:intergenic 70.0%
AAACCATGCCCACCCCGCCC+TGG + chr4_1:76211714-76211733 Msa0573140:CDS 70.0%
CCTTTCTCTCCAGGGCGGGG+TGG - chr4_1:76211726-76211745 None:intergenic 70.0%
CCACCCCGCCCTGGAGAGAA+AGG + chr4_1:76211723-76211742 Msa0573140:CDS 70.0%
TCTCCAGGGCGGGGTGGGCA+TGG - chr4_1:76211720-76211739 None:intergenic 75.0%
! CCGCCGTCGGCGGTGGACAC+CGG - chr4_1:76207404-76207423 None:intergenic 80.0%
! CCGGTGTCCACCGCCGACGG+CGG + chr4_1:76207401-76207420 Msa0573140:CDS 80.0%
! AGTGTCGCCGCCGTCGGCGG+TGG - chr4_1:76207411-76207430 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 76207241 76216193 76207241 ID=Msa0573140;Name=Msa0573140
chr4_1 mRNA 76207241 76216193 76207241 ID=Msa0573140-mRNA-1;Parent=Msa0573140;Name=Msa0573140-mRNA-1;_AED=0.07;_eAED=0.07;_QI=97|1|1|1|1|1|16|720|984
chr4_1 exon 76207241 76208321 76207241 ID=Msa0573140-mRNA-1:exon:26542;Parent=Msa0573140-mRNA-1
chr4_1 exon 76209495 76209809 76209495 ID=Msa0573140-mRNA-1:exon:26543;Parent=Msa0573140-mRNA-1
chr4_1 exon 76209899 76210003 76209899 ID=Msa0573140-mRNA-1:exon:26544;Parent=Msa0573140-mRNA-1
chr4_1 exon 76210104 76210172 76210104 ID=Msa0573140-mRNA-1:exon:26545;Parent=Msa0573140-mRNA-1
chr4_1 exon 76210716 76210883 76210716 ID=Msa0573140-mRNA-1:exon:26546;Parent=Msa0573140-mRNA-1
chr4_1 exon 76210969 76211040 76210969 ID=Msa0573140-mRNA-1:exon:26547;Parent=Msa0573140-mRNA-1
chr4_1 exon 76211149 76211265 76211149 ID=Msa0573140-mRNA-1:exon:26548;Parent=Msa0573140-mRNA-1
chr4_1 exon 76211579 76211758 76211579 ID=Msa0573140-mRNA-1:exon:26549;Parent=Msa0573140-mRNA-1
chr4_1 exon 76211871 76212029 76211871 ID=Msa0573140-mRNA-1:exon:26550;Parent=Msa0573140-mRNA-1
chr4_1 exon 76212370 76212459 76212370 ID=Msa0573140-mRNA-1:exon:26551;Parent=Msa0573140-mRNA-1
chr4_1 exon 76212557 76212649 76212557 ID=Msa0573140-mRNA-1:exon:26552;Parent=Msa0573140-mRNA-1
chr4_1 exon 76212980 76213133 76212980 ID=Msa0573140-mRNA-1:exon:26553;Parent=Msa0573140-mRNA-1
chr4_1 exon 76213235 76213383 76213235 ID=Msa0573140-mRNA-1:exon:26554;Parent=Msa0573140-mRNA-1
chr4_1 exon 76213460 76213555 76213460 ID=Msa0573140-mRNA-1:exon:26555;Parent=Msa0573140-mRNA-1
chr4_1 exon 76214539 76214631 76214539 ID=Msa0573140-mRNA-1:exon:26556;Parent=Msa0573140-mRNA-1
chr4_1 exon 76215363 76216193 76215363 ID=Msa0573140-mRNA-1:exon:26557;Parent=Msa0573140-mRNA-1
chr4_1 five_prime_UTR 76207241 76207337 76207241 ID=Msa0573140-mRNA-1:five_prime_utr;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76207338 76208321 76207338 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76209495 76209809 76209495 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76209899 76210003 76209899 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76210104 76210172 76210104 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76210716 76210883 76210716 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76210969 76211040 76210969 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76211149 76211265 76211149 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76211579 76211758 76211579 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76211871 76212029 76211871 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76212370 76212459 76212370 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76212557 76212649 76212557 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76212980 76213133 76212980 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76213235 76213383 76213235 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76213460 76213555 76213460 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76214539 76214631 76214539 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 CDS 76215363 76215473 76215363 ID=Msa0573140-mRNA-1:cds;Parent=Msa0573140-mRNA-1
chr4_1 three_prime_UTR 76215474 76216193 76215474 ID=Msa0573140-mRNA-1:three_prime_utr;Parent=Msa0573140-mRNA-1
Gene Sequence

>Msa0573140

ATGGAGCAAGAGCCAGCAATGGAGCAGGAATCAACAACACTCGGAAAACGAAGTGAACCGGAACCGGTGTCCACCGCCGACGGCGGCGACACTTCTTCACAACCAAAAAAATGCCGCAGTTCAGAACGCACCTGCGTTCACGAAGTAGCAGTTCCAATCAATTACACCTCAACGAAAGACGAATCACTTCACGGAACACTCTCCAACCCTCTCCACAACGGTACCATGGCTAAAACCTATCCTTTCACACTTGATCCATTTCAACAAGTATCAATTGCATGTCTCGAACGAAACGAATCTGTTTTAGTCTCTGCTCACACCTCCGCCGGAAAAACCGCAATTGCAGAATACGCAATTGCAATGTCCTTTAGAGATAAACAGAGAGTAATTTATACTTCACCATTGAAAGCTTTGAGTAATCAGAAATATAGAGAATTGAGTCAGGAATTTACAGATGTAGGGTTGATGACTGGTGATGTTACTCTTTCTCCGAATGCGACATGTCTTGTTATGACTACGGAGATTCTTCGTGGAATGTTGTATCGTGGTTCTGAAGTTTTGAAGGAAGTTGCTTGGGTCATATTTGATGAAATTCATTATATGAAGGATCGTGAAAGGGGTGTTGTATGGGAAGAAAGCATTATATTTTTACCACCTGCTATTAAGATGGTTTTTCTTTCGGCCACTATGTCGAATGCCACAGAGTTTGCGGAGTGGATTTGTAATATACATAAACAACCCTGTCACGTAGTTTACACTGATTTTAGACCGACACCGTTGCAGCATTATGTTTTTCCTATTGGTGGGAGTGGATTGTATTTGGTTGTTGATGAGAATGAACAGTTTAGAGAAGATAATTTTCTTAAGGTGGAGGATACTTTTGTTAAGCAGAAACTTGGTGAAGGGAAGGGTGGTAAATCGAATGGAAGATTTGGAAAAGGTGGTTCTGCTTCTGGTGGGTCTGATATATACAAGATTGTTAAGATGATCATGGAAAGGAAATTCCAACCTGTTATCATTTTTAGCTTCAGTAGGAGAGAGTGTGAGCAGCATGCAATGTCTATGTCTAAACTTGACTTCAATTCCCAAGAGGAAAAGGATACAGTGGAACACGTTTTTCAGAATGCAATGCTCTGTTTGAATGAAGAAGACCGAAGCTTACCTGCTATCGAGTTGATGTTGCCACTTCTTCAGCGAGGAATTGCTGTTCATCATTCTGGCCTTCTTCCTGTCATCAAAGAATTGGTTGAGCTTCTTTTTCAGGAAGGTCTTGTAAAGGCCCTCTTTGCTACTGAGACATTTGCAATGGGTTTAAATATGCCGGCAAAAACTGTCGTATTCACTGCTGTTAAGAAGTGGGATGGTGATAGTCACCGTTATATTGGATCTGGTGAATATATACAGATGAGTGGAAGGGCTGGGCGTCGTGGCAAAGATGAGCGTGGGATCTGTATCATAATGATTGATGAGCAGATGGAAATGAATAACCTCAAAGACATGGTTTTGGGTAAACCTGCTCCTTTAGTTAGTACATTCAGGCTTAGCTACTACTCAATTTTAAATTTGATGAGCCGAGCAGAAGGCCAGTTCACTGCGGAACACGTGATAAGAAATTCATTTCATCAATTTCAATATGAAAAGACCTTACCTGATGTGGGAAAAAGGGTGTCTATGCTGGAGCAGGAAGTAGCCTTGCTTGATGCTGCAGGGGAGGCTGAAGTATCGGAATATCATAAGCTGAAATTGGACTTAGCTCAGCTTGAGAAGAAGATGATGTCACAAATAATTAGACCTGAAATGATTCTTTATTTTCTTGTCCCTGGTCGACTGATTAAAGTAAGAGAAGGTGGGACAGATTGGGGCTGGGGTGTTGTAGTCAATGTTGTTAAGAAACCTGTTGGCGGTTATATAGTTGACACTTTACTTCATTGTTCACCTGGTTCAAACGAAAACAGTATACGACCAAAACCATGCCCACCCCGCCCTGGAGAGAAAGGTGAAATGCATGTGGTCCCTGTTCAATTACCATTAATCTCTGCCCTTAGTAAACTAAGGATATATGTACCTCCTGATCTCCGGCCCTTGGAAGCTCGGCAAAGCATACTCCTTGCTGTTCAGGAGCTGGGCAATCGTTTTCCTCAAGGTCTTCCAAAGCTTAACCCTGTGAAGGACATGGATGTTCGAGATTCAGAGATAGTTGAACTTGTCAATCAAATAGAGGAACTTGAGAAAAAGTTGTTTGATCATCCTATGCATAAGATTCAAGATGTGGATCAAATTAAGTGCTTTGAGAGGAAAGCTGAAGTGAATCATGAAATTCAACAACTGAAGGCAAAAATGCGGGACTCCCAGCTGCAAAAATTTCGGGAAGAACTTAAAAATCGCTCGCGAGTCTTAAAGAAGCTTGGTCATATTGATTCTGATAGTGTAGTTCAATTGAAAGGAAGGGCAGCCTGCTTGATTGACACAGGCGATGAACTCCTTGTCACCGAATTAATGTTTAATGGCACTTTTAATGATCTTGACCATCATCAAGTTGCTGCCCTTGCAAGTTGTTTTATACCAATAGAGAAATCATCTGAGCAGATACAACTGAGATCAGAGCTTGCGAGACCTCTACAACAGCTTCAAGACAGTGCAAGAAGGATAGCAGAGATAGAGCACGAATGCAAATTGGAGGTAAATGTGAATGAGTATGTCGAATCAACAGTAAGGCCATTCTTGATGGATGTAATATACTCTTGGTCAAAGGGATCAAGTTTTGCTGATGTTACTCAAATGACTGACATCTTCGAGGGGAGTATCATTAGGGCAGCTAGAAGGCTTGACGAGTTTTTGAATCAGTTGCGTGCTGCTGCTGATGCAGTTGGAGAAGCTGACTTGGAGAAGAAATTTGCAGCAGCGAGTGAAAGCCTTCGACGGGGTATTATTTTTGCAAATTCTCTGTATCTGTGA
Protein sequence

>Msa0573140

MEQEPAMEQESTTLGKRSEPEPVSTADGGDTSSQPKKCRSSERTCVHEVAVPINYTSTKDESLHGTLSNPLHNGTMAKTYPFTLDPFQQVSIACLERNESVLVSAHTSAGKTAIAEYAIAMSFRDKQRVIYTSPLKALSNQKYRELSQEFTDVGLMTGDVTLSPNATCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNIHKQPCHVVYTDFRPTPLQHYVFPIGGSGLYLVVDENEQFREDNFLKVEDTFVKQKLGEGKGGKSNGRFGKGGSASGGSDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFNSQEEKDTVEHVFQNAMLCLNEEDRSLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMIDEQMEMNNLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRNSFHQFQYEKTLPDVGKRVSMLEQEVALLDAAGEAEVSEYHKLKLDLAQLEKKMMSQIIRPEMILYFLVPGRLIKVREGGTDWGWGVVVNVVKKPVGGYIVDTLLHCSPGSNENSIRPKPCPPRPGEKGEMHVVPVQLPLISALSKLRIYVPPDLRPLEARQSILLAVQELGNRFPQGLPKLNPVKDMDVRDSEIVELVNQIEELEKKLFDHPMHKIQDVDQIKCFERKAEVNHEIQQLKAKMRDSQLQKFREELKNRSRVLKKLGHIDSDSVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPIEKSSEQIQLRSELARPLQQLQDSARRIAEIEHECKLEVNVNEYVESTVRPFLMDVIYSWSKGSSFADVTQMTDIFEGSIIRAARRLDEFLNQLRAAADAVGEADLEKKFAAASESLRRGIIFANSLYL*