Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278910 | XP_003594504.2 | 98.214 | 504 | 8 | 1 | 1 | 503 | 1 | 504 | 0.0 | 1013 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278910 | sp|Q9M0V4|YAO_ARATH | 54.743 | 506 | 194 | 9 | 10 | 503 | 22 | 504 | 0.0 | 528 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278910 | G7IJV2 | 98.214 | 504 | 8 | 1 | 1 | 503 | 1 | 504 | 0.0 | 1013 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030200 | Msa0278910 | 0.821366 | 4.195087e-53 | -8.615850e-47 |
| Msa0043660 | Msa0278910 | 0.824560 | 7.553568e-54 | -8.615850e-47 |
| Msa0054440 | Msa0278910 | 0.801042 | 1.085083e-48 | -8.615850e-47 |
| Msa0070700 | Msa0278910 | 0.827121 | 1.863433e-54 | -8.615850e-47 |
| Msa0115130 | Msa0278910 | 0.812995 | 3.202600e-51 | -8.615850e-47 |
| Msa0115400 | Msa0278910 | 0.807837 | 4.157805e-50 | -8.615850e-47 |
| Msa0118590 | Msa0278910 | 0.835819 | 1.343854e-56 | -8.615850e-47 |
| Msa0137550 | Msa0278910 | 0.836521 | 8.911943e-57 | -8.615850e-47 |
| Msa0139350 | Msa0278910 | 0.845987 | 2.882194e-59 | -8.615850e-47 |
| Msa0144370 | Msa0278910 | 0.829949 | 3.865772e-55 | -8.615850e-47 |
| Msa0170200 | Msa0278910 | 0.811441 | 6.991192e-51 | -8.615850e-47 |
| Msa0184200 | Msa0278910 | 0.811137 | 8.136181e-51 | -8.615850e-47 |
| Msa0195340 | Msa0278910 | 0.804695 | 1.909328e-49 | -8.615850e-47 |
| Msa0278910 | Msa0335730 | 0.804281 | 2.328827e-49 | -8.615850e-47 |
| Msa0278910 | Msa0449210 | 0.821878 | 3.194697e-53 | -8.615850e-47 |
| Msa0278910 | Msa0497490 | 0.806310 | 8.753289e-50 | -8.615850e-47 |
| Msa0278910 | Msa0542090 | 0.808841 | 2.539796e-50 | -8.615850e-47 |
| Msa0278910 | Msa0542130 | 0.804700 | 1.904303e-49 | -8.615850e-47 |
| Msa0278910 | Msa0648780 | 0.818994 | 1.465732e-52 | -8.615850e-47 |
| Msa0278910 | Msa0745740 | 0.800899 | 1.160715e-48 | -8.615850e-47 |
| Msa0278910 | Msa0945440 | 0.806252 | 9.004498e-50 | -8.615850e-47 |
| Msa0278910 | Msa1153060 | 0.830189 | 3.377581e-55 | -8.615850e-47 |
| Msa0278910 | Msa1174470 | 0.833480 | 5.205481e-56 | -8.615850e-47 |
| Msa0278910 | Msa1266990 | 0.833374 | 5.531575e-56 | -8.615850e-47 |
| Msa0278910 | Msa1356400 | 0.806743 | 7.090906e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278910 | MtrunA17_Chr2g0292301 | 98.214 | 504 | 8 | 1 | 1 | 503 | 1 | 504 | 0.0 | 1013 |
| Msa0278910 | MtrunA17_Chr8g0392701 | 26.697 | 221 | 138 | 4 | 144 | 359 | 59 | 260 | 3.78e-16 | 79.7 |
| Msa0278910 | MtrunA17_Chr1g0176241 | 33.607 | 122 | 80 | 1 | 199 | 319 | 360 | 481 | 1.74e-15 | 79.0 |
| Msa0278910 | MtrunA17_Chr4g0059031 | 33.514 | 185 | 94 | 7 | 151 | 325 | 63 | 228 | 6.92e-15 | 77.8 |
| Msa0278910 | MtrunA17_Chr3g0093681 | 29.545 | 176 | 101 | 5 | 147 | 319 | 397 | 552 | 3.25e-14 | 75.1 |
| Msa0278910 | MtrunA17_Chr1g0172501 | 29.545 | 176 | 101 | 5 | 147 | 319 | 397 | 552 | 8.86e-14 | 73.9 |
| Msa0278910 | MtrunA17_Chr2g0295791 | 25.114 | 219 | 143 | 3 | 143 | 359 | 207 | 406 | 7.72e-13 | 70.5 |
| Msa0278910 | MtrunA17_Chr5g0401671 | 26.724 | 232 | 161 | 6 | 144 | 371 | 243 | 469 | 9.51e-13 | 70.5 |
| Msa0278910 | MtrunA17_Chr7g0246741 | 29.375 | 160 | 94 | 3 | 141 | 299 | 404 | 545 | 1.66e-12 | 70.1 |
| Msa0278910 | MtrunA17_Chr4g0053651 | 21.914 | 324 | 209 | 7 | 147 | 442 | 229 | 536 | 2.93e-12 | 68.9 |
| Msa0278910 | MtrunA17_Chr4g0067151 | 22.845 | 232 | 151 | 6 | 147 | 370 | 77 | 288 | 6.70e-12 | 66.6 |
| Msa0278910 | MtrunA17_Chr4g0067151 | 24.891 | 229 | 144 | 7 | 142 | 359 | 21 | 232 | 3.76e-11 | 64.3 |
| Msa0278910 | MtrunA17_Chr1g0200901 | 30.588 | 170 | 113 | 4 | 206 | 371 | 77 | 245 | 8.27e-12 | 67.0 |
| Msa0278910 | MtrunA17_Chr4g0069701 | 26.404 | 178 | 117 | 4 | 196 | 359 | 516 | 693 | 9.21e-12 | 67.8 |
| Msa0278910 | MtrunA17_Chr4g0069701 | 27.848 | 158 | 94 | 4 | 169 | 325 | 85 | 223 | 2.05e-11 | 66.6 |
| Msa0278910 | MtrunA17_Chr1g0185501 | 21.519 | 237 | 160 | 5 | 141 | 370 | 62 | 279 | 9.95e-12 | 66.2 |
| Msa0278910 | MtrunA17_Chr4g0058091 | 22.944 | 231 | 163 | 5 | 224 | 441 | 245 | 473 | 2.89e-11 | 65.9 |
| Msa0278910 | MtrunA17_Chr3g0136971 | 35.000 | 120 | 59 | 2 | 165 | 284 | 520 | 620 | 3.34e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0278910 | AT4G05410.1 | 54.743 | 506 | 194 | 9 | 10 | 503 | 22 | 504 | 0.0 | 528 |
| Msa0278910 | AT4G21130.1 | 52.569 | 506 | 202 | 5 | 1 | 503 | 9 | 479 | 1.24e-174 | 500 |
| Msa0278910 | AT3G18130.1 | 24.671 | 304 | 184 | 9 | 144 | 441 | 59 | 323 | 2.11e-16 | 80.9 |
| Msa0278910 | AT1G48630.1 | 24.342 | 304 | 185 | 9 | 144 | 441 | 59 | 323 | 1.72e-15 | 78.2 |
| Msa0278910 | AT1G48630.1 | 26.778 | 239 | 147 | 8 | 143 | 370 | 10 | 231 | 1.99e-12 | 68.9 |
| Msa0278910 | AT5G52820.1 | 32.520 | 123 | 82 | 1 | 199 | 320 | 350 | 472 | 2.98e-15 | 78.6 |
| Msa0278910 | AT2G32700.2 | 24.286 | 210 | 116 | 4 | 207 | 373 | 508 | 717 | 6.75e-15 | 78.2 |
| Msa0278910 | AT2G32700.5 | 24.286 | 210 | 116 | 4 | 207 | 373 | 508 | 717 | 6.75e-15 | 78.2 |
| Msa0278910 | AT2G32700.1 | 24.286 | 210 | 116 | 4 | 207 | 373 | 508 | 717 | 6.75e-15 | 78.2 |
| Msa0278910 | AT2G32700.4 | 24.286 | 210 | 116 | 4 | 207 | 373 | 508 | 717 | 6.75e-15 | 78.2 |
| Msa0278910 | AT2G32700.3 | 24.286 | 210 | 116 | 4 | 207 | 373 | 508 | 717 | 6.75e-15 | 78.2 |
| Msa0278910 | AT2G32700.6 | 24.286 | 210 | 116 | 4 | 207 | 373 | 506 | 715 | 6.80e-15 | 78.2 |
| Msa0278910 | AT2G32700.7 | 24.286 | 210 | 116 | 4 | 207 | 373 | 527 | 736 | 8.08e-15 | 77.8 |
| Msa0278910 | AT5G16750.1 | 32.967 | 182 | 96 | 6 | 151 | 325 | 63 | 225 | 1.18e-14 | 77.4 |
| Msa0278910 | AT3G21540.1 | 32.911 | 158 | 86 | 4 | 169 | 325 | 85 | 223 | 5.46e-14 | 75.5 |
| Msa0278910 | AT1G18080.1 | 25.225 | 222 | 141 | 4 | 144 | 359 | 59 | 261 | 1.54e-13 | 72.0 |
| Msa0278910 | AT5G67320.1 | 26.201 | 229 | 160 | 5 | 147 | 371 | 264 | 487 | 4.05e-13 | 72.4 |
| Msa0278910 | AT2G05720.1 | 30.625 | 160 | 105 | 4 | 147 | 300 | 105 | 264 | 1.55e-12 | 68.6 |
| Msa0278910 | AT1G61210.3 | 27.723 | 202 | 123 | 4 | 141 | 319 | 51 | 252 | 3.23e-12 | 69.7 |
| Msa0278910 | AT1G61210.1 | 29.487 | 156 | 89 | 2 | 165 | 319 | 117 | 252 | 3.72e-12 | 69.7 |
| Msa0278910 | AT1G61210.2 | 29.487 | 156 | 89 | 2 | 165 | 319 | 117 | 252 | 4.17e-12 | 69.3 |
| Msa0278910 | AT4G15900.1 | 25.114 | 219 | 143 | 3 | 143 | 359 | 213 | 412 | 5.25e-12 | 68.6 |
| Msa0278910 | AT1G11160.3 | 26.238 | 202 | 126 | 4 | 141 | 319 | 9 | 210 | 1.06e-11 | 68.2 |
| Msa0278910 | AT1G24130.1 | 27.957 | 186 | 104 | 7 | 145 | 320 | 189 | 354 | 1.55e-11 | 66.6 |
| Msa0278910 | AT1G11160.2 | 26.500 | 200 | 124 | 4 | 143 | 319 | 53 | 252 | 2.10e-11 | 67.0 |
| Msa0278910 | AT1G11160.4 | 26.500 | 200 | 124 | 4 | 143 | 319 | 53 | 252 | 2.17e-11 | 67.0 |
| Msa0278910 | AT5G50230.1 | 22.318 | 233 | 162 | 7 | 224 | 441 | 240 | 468 | 2.25e-11 | 66.6 |
| Msa0278910 | AT1G11160.1 | 26.500 | 200 | 124 | 4 | 143 | 319 | 53 | 252 | 2.28e-11 | 67.0 |
| Msa0278910 | AT1G15440.2 | 28.125 | 160 | 96 | 3 | 141 | 299 | 384 | 525 | 2.63e-11 | 66.6 |
| Msa0278910 | AT1G15440.1 | 28.125 | 160 | 96 | 3 | 141 | 299 | 424 | 565 | 2.73e-11 | 66.6 |
| Msa0278910 | AT5G25150.1 | 32.500 | 120 | 62 | 2 | 165 | 284 | 519 | 619 | 7.32e-11 | 65.1 |
| Msa0278910 | AT5G25150.2 | 32.500 | 120 | 62 | 2 | 165 | 284 | 519 | 619 | 7.89e-11 | 65.1 |
| Msa0278910 | AT5G15550.1 | 27.222 | 180 | 107 | 5 | 143 | 318 | 267 | 426 | 9.27e-11 | 64.3 |
| Msa0278910 | AT5G15550.3 | 27.222 | 180 | 107 | 5 | 143 | 318 | 267 | 426 | 9.27e-11 | 64.3 |
Find 138 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTAGTATGCAGTTGTTTA+AGG | 0.158441 | 2_3:-12068377 | Msa0278910:intron |
| ATTTGGGAAATTTGAGATTT+TGG | 0.169592 | 2_3:+12070062 | None:intergenic |
| TGTTCTTTGCGGGCATGATT+AGG | 0.209961 | 2_3:+12070030 | None:intergenic |
| ATGAAGAGGTTTAATGTCTT+TGG | 0.241848 | 2_3:+12067524 | None:intergenic |
| TGATTAGGGTTTCAGAGATT+TGG | 0.248198 | 2_3:+12070045 | None:intergenic |
| TTGATCGTCATATTCATATA+TGG | 0.249177 | 2_3:-12069099 | Msa0278910:CDS |
| TTTATCTGAGGATGATTCTA+AGG | 0.262062 | 2_3:-12069320 | Msa0278910:CDS |
| GGTTGGGTTTGTGAATTCTT+TGG | 0.283873 | 2_3:-12067378 | Msa0278910:CDS |
| TTCTTGCGGTTGTTCTTTGC+GGG | 0.303078 | 2_3:+12070020 | None:intergenic |
| TTGCTGCTCCTTTATCATCT+TGG | 0.312953 | 2_3:+12069689 | None:intergenic |
| GATGGTCGCTATTTGGCAAC+TGG | 0.313080 | 2_3:-12069127 | Msa0278910:CDS |
| GTTCTTTGCGGGCATGATTA+GGG | 0.313676 | 2_3:+12070031 | None:intergenic |
| GATTAGGGTTTCAGAGATTT+GGG | 0.316025 | 2_3:+12070046 | None:intergenic |
| TGATGGTAGCATTGAGCTTT+GGG | 0.320486 | 2_3:-12068029 | Msa0278910:CDS |
| TGTGTTATTTAGGGTTAAAT+TGG | 0.338201 | 2_3:-12069401 | Msa0278910:intron |
| AAGTTCGGATGGTCGCTATT+TGG | 0.344368 | 2_3:-12069134 | Msa0278910:CDS |
| AACAAAACAACAGCATTCTA+AGG | 0.349174 | 2_3:+12068081 | None:intergenic |
| CTTCTTGCGGTTGTTCTTTG+CGG | 0.352672 | 2_3:+12070019 | None:intergenic |
| GCCGCATCTGGTGCGGGTAA+TGG | 0.356528 | 2_3:-12067579 | Msa0278910:CDS |
| TAGAGGTCCTGTTTCTTCTC+TGG | 0.361793 | 2_3:-12068566 | Msa0278910:CDS |
| TTTGACTTTGGCTGCAAGTT+CGG | 0.370464 | 2_3:-12069149 | Msa0278910:CDS |
| TCAGCAAAATTCCTAGTTGC+TGG | 0.374225 | 2_3:-12067344 | Msa0278910:CDS |
| GCGCACTAGGGAGCATCTTC+AGG | 0.377779 | 2_3:-12069071 | Msa0278910:intron |
| TTGATCGAACGATTAAGATA+TGG | 0.379793 | 2_3:-12068504 | Msa0278910:CDS |
| ATGATGGTAGCATTGAGCTT+TGG | 0.379946 | 2_3:-12068030 | Msa0278910:CDS |
| AACAGTGACCTTGCCGCATC+TGG | 0.381669 | 2_3:-12067591 | Msa0278910:CDS |
| GGCGGCTACTCTGCGGCGTT+TGG | 0.384477 | 2_3:+12069962 | None:intergenic |
| GGCTACTCTGCGGCGTTTGG+TGG | 0.386767 | 2_3:+12069965 | None:intergenic |
| AATAATGAGGAATTCTTGTC+TGG | 0.393333 | 2_3:-12068058 | Msa0278910:CDS |
| ATTCAAAATTCTCAAACAAT+CGG | 0.394098 | 2_3:+12065522 | None:intergenic |
| ATTGTTCGTCAGTACACTCT+TGG | 0.407718 | 2_3:-12067638 | Msa0278910:CDS |
| TCAGAAAAGCTATTGCTTCA+AGG | 0.412080 | 2_3:-12069650 | Msa0278910:intron |
| AAATTCCTAGTTGCTGGAGT+TGG | 0.422760 | 2_3:-12067338 | Msa0278910:CDS |
| ATCGAAAGGTGAAGGGGAAC+AGG | 0.431103 | 2_3:-12069877 | Msa0278910:CDS |
| TCTATGAGTAAGCGAGGCTT+TGG | 0.436605 | 2_3:-12065390 | Msa0278910:three_prime_UTR |
| TCTGAAGTCTCATGGCTTGA+AGG | 0.437606 | 2_3:-12069209 | Msa0278910:CDS |
| TGAGGAATTCTTGTCTGGTT+CGG | 0.438253 | 2_3:-12068053 | Msa0278910:CDS |
| TTGATTGTTTACGCAAAGAA+AGG | 0.438257 | 2_3:-12068420 | Msa0278910:CDS |
| TTCTTGTCTGGTTCGGATGA+TGG | 0.442227 | 2_3:-12068046 | Msa0278910:CDS |
| TACTTAATACTTCACTTTGG+TGG | 0.445587 | 2_3:+12068443 | None:intergenic |
| ACTTACATGAATACTCTGTT+TGG | 0.448065 | 2_3:-12068466 | Msa0278910:CDS |
| AGACTTCAGAACCGAATCAA+TGG | 0.449071 | 2_3:+12069222 | None:intergenic |
| AATTCCTAGTTGCTGGAGTT+GGG | 0.454442 | 2_3:-12067337 | Msa0278910:CDS |
| TGATCGTCATATTCATATAT+GGG | 0.461527 | 2_3:-12069098 | Msa0278910:CDS |
| GTATAAGTGGCCCATTGATT+CGG | 0.462919 | 2_3:-12069233 | Msa0278910:CDS |
| ATGAAGATGAGGATGGGGCG+AGG | 0.464919 | 2_3:-12069725 | Msa0278910:CDS |
| GTTAAATTGGATGGTGATGG+TGG | 0.474661 | 2_3:-12069388 | Msa0278910:CDS |
| TTCAAAATTCTCAAACAATC+GGG | 0.476345 | 2_3:+12065523 | None:intergenic |
| GATTCGGTTCTGAAGTCTCA+TGG | 0.477291 | 2_3:-12069217 | Msa0278910:CDS |
| GCATTCCTCAAAATATGAAT+AGG | 0.478685 | 2_3:+12067989 | None:intergenic |
| TCTCATGATGACAATTTAAG+TGG | 0.478829 | 2_3:+12065668 | None:intergenic |
| AGAAGTTTAAAGATAGTGCT+AGG | 0.480850 | 2_3:-12069797 | Msa0278910:CDS |
| TGACGAACAATGGTGATTCT+CGG | 0.481332 | 2_3:+12067650 | None:intergenic |
| GACCTTGCCGCATCTGGTGC+GGG | 0.481462 | 2_3:-12067585 | Msa0278910:CDS |
| CCTAGTTGCTGGAGTTGGGC+AGG | 0.482464 | 2_3:-12067333 | Msa0278910:intron |
| GACGAACAATGGTGATTCTC+GGG | 0.482880 | 2_3:+12067651 | None:intergenic |
| AGATACAAAGGTTGCAGCTA+GGG | 0.486534 | 2_3:+12070107 | None:intergenic |
| TGTTCCCCTTCACCTTTCGA+TGG | 0.486752 | 2_3:+12069879 | None:intergenic |
| GCTACTCTGCGGCGTTTGGT+GGG | 0.489709 | 2_3:+12069966 | None:intergenic |
| AGGGTTAAATTGGATGGTGA+TGG | 0.496606 | 2_3:-12069391 | Msa0278910:CDS |
| TGACCTTGCCGCATCTGGTG+CGG | 0.500692 | 2_3:-12067586 | Msa0278910:CDS |
| CTAAAAGCCAGAGAAGAAAC+AGG | 0.502189 | 2_3:+12068559 | None:intergenic |
| AGATGGAAGCATTGTGCAAT+GGG | 0.503563 | 2_3:-12069281 | Msa0278910:CDS |
| CAAAGAGATGAAGATGATGA+TGG | 0.512344 | 2_3:-12069762 | Msa0278910:CDS |
| TTGTTCGTCAGTACACTCTT+GGG | 0.515002 | 2_3:-12067637 | Msa0278910:CDS |
| ATGGTCGCTATTTGGCAACT+GGG | 0.518740 | 2_3:-12069126 | Msa0278910:CDS |
| CTCAGCATCTTGATCTTCAT+CGG | 0.521698 | 2_3:+12069941 | None:intergenic |
| CAATACTTAATACTTCACTT+TGG | 0.525590 | 2_3:+12068440 | None:intergenic |
| GACTTCAGAACCGAATCAAT+GGG | 0.526962 | 2_3:+12069223 | None:intergenic |
| GCAATTAGTCAAAATTGAAG+AGG | 0.530500 | 2_3:+12065624 | None:intergenic |
| ACTTTGGCTGCAAGTTCGGA+TGG | 0.530603 | 2_3:-12069145 | Msa0278910:CDS |
| ATATATGGGATACGCGCACT+AGG | 0.531446 | 2_3:-12069084 | Msa0278910:CDS |
| TTTGTTCCATCGAAAGGTGA+AGG | 0.537167 | 2_3:-12069885 | Msa0278910:CDS |
| TTATCTGAGGATGATTCTAA+GGG | 0.538043 | 2_3:-12069319 | Msa0278910:CDS |
| TGAAGATGAGGATGGGGCGA+GGG | 0.541288 | 2_3:-12069724 | Msa0278910:CDS |
| ACCTCTTCATAATGTACCGT+TGG | 0.541442 | 2_3:-12067511 | Msa0278910:intron |
| CCTGCCCAACTCCAGCAACT+AGG | 0.543124 | 2_3:+12067333 | None:intergenic |
| AAAGAAAGGGTATTATCTGC+TGG | 0.543326 | 2_3:-12068406 | Msa0278910:CDS |
| AGGTTTACCTAGGTTACCGT+TGG | 0.548172 | 2_3:+12067910 | None:intergenic |
| AGGAAACTACAGCTGAAGCT+AGG | 0.549075 | 2_3:-12069845 | Msa0278910:CDS |
| TGATTGTTTACGCAAAGAAA+GGG | 0.549662 | 2_3:-12068419 | Msa0278910:CDS |
| AGAATACGTGAAGCTCGTAA+TGG | 0.550611 | 2_3:-12065704 | Msa0278910:CDS |
| TTATTTAGGGTTAAATTGGA+TGG | 0.552595 | 2_3:-12069397 | Msa0278910:intron |
| AGGAACCTCGTCTAGGAAGG+TGG | 0.554796 | 2_3:-12065730 | Msa0278910:CDS |
| CAGATACAAAGGTTGCAGCT+AGG | 0.555995 | 2_3:+12070106 | None:intergenic |
| GCTGTCGACCAAGATGATAA+AGG | 0.556721 | 2_3:-12069697 | Msa0278910:CDS |
| TACAGGAACCTCGTCTAGGA+AGG | 0.557034 | 2_3:-12065733 | Msa0278910:intron |
| TTGTTCCATCGAAAGGTGAA+GGG | 0.560861 | 2_3:-12069884 | Msa0278910:CDS |
| CAGCATTCTAAGGAAGATGC+AGG | 0.563049 | 2_3:+12068091 | None:intergenic |
| ATACTACCCAACGGTAACCT+AGG | 0.563236 | 2_3:-12067917 | Msa0278910:intron |
| GGAACCTCGTCTAGGAAGGT+GGG | 0.567525 | 2_3:-12065729 | Msa0278910:CDS |
| TGGTCGCTATTTGGCAACTG+GGG | 0.572620 | 2_3:-12069125 | Msa0278910:CDS |
| GATGATGATGAAGATGAGGA+TGG | 0.575039 | 2_3:-12069732 | Msa0278910:CDS |
| TTGTAGACATTTGTTCACAT+AGG | 0.576368 | 2_3:-12065415 | Msa0278910:three_prime_UTR |
| ACCATTACCCGCACCAGATG+CGG | 0.576457 | 2_3:+12067578 | None:intergenic |
| AAGATGGAAGCATTGTGCAA+TGG | 0.576859 | 2_3:-12069282 | Msa0278910:CDS |
| CTTCCCCACCTTCCTAGACG+AGG | 0.577906 | 2_3:+12065725 | None:intergenic |
| AACAATGGTGATTCTCGGGA+TGG | 0.581006 | 2_3:+12067655 | None:intergenic |
| AGCTAGGAAGAGAGTAGCTG+AGG | 0.585734 | 2_3:-12069829 | Msa0278910:CDS |
| GGTTTACCTAGGTTACCGTT+GGG | 0.589730 | 2_3:+12067911 | None:intergenic |
| AGATAGTGCTAGGAGAGAGA+AGG | 0.590376 | 2_3:-12069787 | Msa0278910:CDS |
| GGTCGCTATTTGGCAACTGG+GGG | 0.593130 | 2_3:-12069124 | Msa0278910:CDS |
| GGAAATGTGAGAGGTATAAG+TGG | 0.597715 | 2_3:-12069246 | Msa0278910:CDS |
| TACCCGCACCAGATGCGGCA+AGG | 0.597735 | 2_3:+12067583 | None:intergenic |
| ACCAACGGTACATTATGAAG+AGG | 0.598217 | 2_3:+12067510 | None:intergenic |
| TGATGATGAAGATGAGGATG+GGG | 0.598492 | 2_3:-12069730 | Msa0278910:CDS |
| CACTGCGGTGGCTTTATCTG+AGG | 0.600696 | 2_3:-12069332 | Msa0278910:CDS |
| ATGATGATGAAGATGAGGAT+GGG | 0.602093 | 2_3:-12069731 | Msa0278910:CDS |
| GATACATATAATTAAGATCA+CGG | 0.603779 | 2_3:+12065569 | None:intergenic |
| GAACCTCGTCTAGGAAGGTG+GGG | 0.608130 | 2_3:-12065728 | Msa0278910:CDS |
| TCAGTGCAGTGACCGTCTGT+AGG | 0.612967 | 2_3:-12067614 | Msa0278910:CDS |
| TGCAATGGGATGTTGAGAGT+GGG | 0.616349 | 2_3:-12069267 | Msa0278910:CDS |
| ACAACTGCATACTACGATCA+CGG | 0.616853 | 2_3:+12068383 | None:intergenic |
| TTGAGAGTGGGAAATGTGAG+AGG | 0.619145 | 2_3:-12069255 | Msa0278910:CDS |
| TGTTCCATCGAAAGGTGAAG+GGG | 0.620286 | 2_3:-12069883 | Msa0278910:CDS |
| TGCTTTGTAGCAGAACCTTG+AGG | 0.621073 | 2_3:+12069184 | None:intergenic |
| TATATGGGATACGCGCACTA+GGG | 0.624499 | 2_3:-12069083 | Msa0278910:CDS |
| AATTGTCATCATGAGATCTG+AGG | 0.624527 | 2_3:-12065661 | Msa0278910:exon |
| GGTCGCGTGAATTCTTCTTG+CGG | 0.627721 | 2_3:+12070006 | None:intergenic |
| GATGATAAAGGAGCAGCAAG+AGG | 0.629548 | 2_3:-12069685 | Msa0278910:CDS |
| AAGGTCACTGTTCCTACAGA+CGG | 0.637361 | 2_3:+12067602 | None:intergenic |
| AAGAGTGTACTGACGAACAA+TGG | 0.638794 | 2_3:+12067640 | None:intergenic |
| AAACGATCCAGAAAATAGCT+CGG | 0.640991 | 2_3:+12068525 | None:intergenic |
| GAAACAGGACCTCTATGACC+AGG | 0.641871 | 2_3:+12068574 | None:intergenic |
| AAGGAGCAGCAAGAGGAGAG+TGG | 0.643486 | 2_3:-12069678 | Msa0278910:CDS |
| AGCATCTTGATCTTCATCGG+CGG | 0.643638 | 2_3:+12069944 | None:intergenic |
| CATGGCTTGAAGGATCCTCA+AGG | 0.643817 | 2_3:-12069199 | Msa0278910:CDS |
| GATTAAGATATGGAATGTTG+AGG | 0.643891 | 2_3:-12068494 | Msa0278910:CDS |
| TAAACAATGTGTCACTGCGG+TGG | 0.644642 | 2_3:-12069344 | Msa0278910:CDS |
| AGGGGAACAGGAGTCTGAAG+AGG | 0.648059 | 2_3:-12069865 | Msa0278910:CDS |
| AATGGTGATTCTCGGGATGG+TGG | 0.653592 | 2_3:+12067658 | None:intergenic |
| GTGCAATGGGATGTTGAGAG+TGG | 0.654323 | 2_3:-12069268 | Msa0278910:CDS |
| GATGGTAGCATTGAGCTTTG+GGG | 0.661259 | 2_3:-12068028 | Msa0278910:CDS |
| TAGGCATCTATGAGTAAGCG+AGG | 0.673238 | 2_3:-12065396 | Msa0278910:three_prime_UTR |
| GATAGTGAAATACTACCCAA+CGG | 0.686398 | 2_3:-12067926 | Msa0278910:CDS |
| TATCTGAGGATGATTCTAAG+GGG | 0.700099 | 2_3:-12069318 | Msa0278910:CDS |
| CTTCATCGGCGGCTACTCTG+CGG | 0.710277 | 2_3:+12069955 | None:intergenic |
| GCATAAACAATGTGTCACTG+CGG | 0.823678 | 2_3:-12069347 | Msa0278910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAGTGATTAATTAAT+AGG | - | chr2_3:12067240-12067259 | Msa0278910:intron | 10.0% |
| !!! | ATTAGTATATTGTTTTTTAA+TGG | - | chr2_3:12069583-12069602 | Msa0278910:intron | 10.0% |
| !!! | TTAGTATATTGTTTTTTAAT+GGG | - | chr2_3:12069584-12069603 | Msa0278910:intron | 10.0% |
| !! | ATATTCAAAAATACAATTGT+TGG | - | chr2_3:12066504-12066523 | Msa0278910:intron | 15.0% |
| !! | GAATTACTAAATACAAATTA+AGG | + | chr2_3:12066782-12066801 | None:intergenic | 15.0% |
| !! | AATTTGTATTTAGTAATTCT+TGG | - | chr2_3:12066783-12066802 | Msa0278910:intron | 15.0% |
| !! | ATATGAAAATATAATCATTG+AGG | + | chr2_3:12067702-12067721 | None:intergenic | 15.0% |
| !! | AACTAAACTCATTTATTTAT+TGG | - | chr2_3:12068021-12068040 | Msa0278910:CDS | 15.0% |
| !!! | ATTTTACTTAATTTTCTCTT+TGG | - | chr2_3:12068238-12068257 | Msa0278910:intron | 15.0% |
| !! | TAAAAAATTGTATTGTAGAA+GGG | + | chr2_3:12068638-12068657 | None:intergenic | 15.0% |
| !!! | ATCCAAAGTATAAATTTTTA+AGG | + | chr2_3:12068839-12068858 | None:intergenic | 15.0% |
| !! | TTAGTATAAGCATATTAATA+TGG | - | chr2_3:12068910-12068929 | Msa0278910:intron | 15.0% |
| !!! | ATTTGAGATTTTGGTTTTTA+GGG | + | chr2_3:12065425-12065444 | None:intergenic | 20.0% |
| !!! | AATTTGAGATTTTGGTTTTT+AGG | + | chr2_3:12065426-12065445 | None:intergenic | 20.0% |
| !! | TTGCTTCAATTAAACAAAAA+GGG | + | chr2_3:12066014-12066033 | None:intergenic | 20.0% |
| !! | ATTGCTTCAATTAAACAAAA+AGG | + | chr2_3:12066015-12066034 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTAATTGAAGCAA+TGG | - | chr2_3:12066014-12066033 | Msa0278910:intron | 20.0% |
| !!! | TTTTGTTTAATTGAAGCAAT+GGG | - | chr2_3:12066015-12066034 | Msa0278910:intron | 20.0% |
| !!! | ACAATTGTTGGATATTTTTT+TGG | - | chr2_3:12066516-12066535 | Msa0278910:intron | 20.0% |
| !!! | CAATTGTTGGATATTTTTTT+GGG | - | chr2_3:12066517-12066536 | Msa0278910:intron | 20.0% |
| !!! | AATTGTTGGATATTTTTTTG+GGG | - | chr2_3:12066518-12066537 | Msa0278910:intron | 20.0% |
| !! | TTGTTTGTATTTACAGATTA+AGG | - | chr2_3:12066583-12066602 | Msa0278910:intron | 20.0% |
| !! | TGTTTGTATTTACAGATTAA+GGG | - | chr2_3:12066584-12066603 | Msa0278910:intron | 20.0% |
| !! | ATGTTATATGTTAACATAAG+CGG | - | chr2_3:12066748-12066767 | Msa0278910:intron | 20.0% |
| !! | ACTATCAATACAGTATTTAA+AGG | + | chr2_3:12067606-12067625 | None:intergenic | 20.0% |
| !! | ACAAATGACAGATATATTTA+CGG | + | chr2_3:12067728-12067747 | None:intergenic | 20.0% |
| !!! | TAATAAATCTTTTGTATCAC+AGG | - | chr2_3:12068094-12068113 | Msa0278910:CDS | 20.0% |
| !! | AATCACTATTTCAAAAAAGA+TGG | + | chr2_3:12068342-12068361 | None:intergenic | 20.0% |
| !! | CTAAAAAATTGTATTGTAGA+AGG | + | chr2_3:12068639-12068658 | None:intergenic | 20.0% |
| !! | TGCCTTAAAAATTTATACTT+TGG | - | chr2_3:12068834-12068853 | Msa0278910:intron | 20.0% |
| !! | TAGAAGATAGTTAATTGTTA+TGG | - | chr2_3:12068885-12068904 | Msa0278910:intron | 20.0% |
| !! | AGAAGATAGTTAATTGTTAT+GGG | - | chr2_3:12068886-12068905 | Msa0278910:intron | 20.0% |
| !! | TGAAGGAATTAATAACATTA+AGG | - | chr2_3:12069109-12069128 | Msa0278910:CDS | 20.0% |
| !! | GAAGGAATTAATAACATTAA+GGG | - | chr2_3:12069110-12069129 | Msa0278910:CDS | 20.0% |
| !! | TTCTAAATGGAGTTTAATAA+AGG | + | chr2_3:12069232-12069251 | None:intergenic | 20.0% |
| !! | TTTATTAAACTCCATTTAGA+AGG | - | chr2_3:12069231-12069250 | Msa0278910:CDS | 20.0% |
| !!! | TTAACAAAATGTCTTTTTAC+AGG | - | chr2_3:12069743-12069762 | Msa0278910:CDS | 20.0% |
| !! | GATACATATAATTAAGATCA+CGG | + | chr2_3:12069927-12069946 | None:intergenic | 20.0% |
| !! | ATTCAAAATTCTCAAACAAT+CGG | + | chr2_3:12069974-12069993 | None:intergenic | 20.0% |
| !!! | ATTTGGGAAATTTGAGATTT+TGG | + | chr2_3:12065434-12065453 | None:intergenic | 25.0% |
| ! | AAACAAGCAATTAACCAAAA+GGG | + | chr2_3:12065963-12065982 | None:intergenic | 25.0% |
| ! | AAAACAAGCAATTAACCAAA+AGG | + | chr2_3:12065964-12065983 | None:intergenic | 25.0% |
| !!! | TGTGTTATTTAGGGTTAAAT+TGG | - | chr2_3:12066092-12066111 | Msa0278910:intron | 25.0% |
| !! | TTATTTAGGGTTAAATTGGA+TGG | - | chr2_3:12066096-12066115 | Msa0278910:intron | 25.0% |
| ! | TTGATCGTCATATTCATATA+TGG | - | chr2_3:12066394-12066413 | Msa0278910:intron | 25.0% |
| ! | TGATCGTCATATTCATATAT+GGG | - | chr2_3:12066395-12066414 | Msa0278910:intron | 25.0% |
| ! | CAAAGTTTCAAAGAATGAAA+AGG | + | chr2_3:12066456-12066475 | None:intergenic | 25.0% |
| !!! | AAACTTTGAAATGAACAACA+AGG | - | chr2_3:12066468-12066487 | Msa0278910:intron | 25.0% |
| ! | AATGAACAACAAGGTTATAT+AGG | - | chr2_3:12066477-12066496 | Msa0278910:intron | 25.0% |
| ! | ATGAACAACAAGGTTATATA+GGG | - | chr2_3:12066478-12066497 | Msa0278910:intron | 25.0% |
| ! | CAATACTTAATACTTCACTT+TGG | + | chr2_3:12067056-12067075 | None:intergenic | 25.0% |
| ! | ATATACTTAAGACTTCATCT+TGG | + | chr2_3:12067150-12067169 | None:intergenic | 25.0% |
| ! | AAGATGAAGTCTTAAGTATA+TGG | - | chr2_3:12067149-12067168 | Msa0278910:intron | 25.0% |
| ! | CAAAACCATATTGTATATGT+CGG | - | chr2_3:12067175-12067194 | Msa0278910:intron | 25.0% |
| ! | AATTTCTTTCCTATCTTCAA+AGG | - | chr2_3:12067264-12067283 | Msa0278910:intron | 25.0% |
| ! | ATGTGTATTCTCTGTAATTT+AGG | - | chr2_3:12067347-12067366 | Msa0278910:CDS | 25.0% |
| !!! | CTGTTGTTTTGTTAATAATG+AGG | - | chr2_3:12067422-12067441 | Msa0278910:intron | 25.0% |
| !! | GTAGTATTTCACTATCTTTT+TGG | + | chr2_3:12067563-12067582 | None:intergenic | 25.0% |
| ! | ACACATAAGTAAATTTCTGA+AGG | + | chr2_3:12067630-12067649 | None:intergenic | 25.0% |
| ! | ATATTGAGAAAAGTAAGCAA+AGG | + | chr2_3:12067668-12067687 | None:intergenic | 25.0% |
| ! | GTTATAGTTAGCATTATGTT+AGG | - | chr2_3:12067768-12067787 | Msa0278910:intron | 25.0% |
| !!! | GTAATGGTTTTGTTAGATTA+TGG | - | chr2_3:12067930-12067949 | Msa0278910:CDS | 25.0% |
| !!! | TTACTCTGTTTTTTCTTCTT+TGG | - | chr2_3:12068210-12068229 | Msa0278910:intron | 25.0% |
| !! | AATAGTGATTTTGTAGAGAA+TGG | - | chr2_3:12068352-12068371 | Msa0278910:intron | 25.0% |
| ! | TGAATTATTCTCCTTGAAAA+AGG | + | chr2_3:12068446-12068465 | None:intergenic | 25.0% |
| !!! | AGAATAATTCACCTTTTTCA+AGG | - | chr2_3:12068455-12068474 | Msa0278910:CDS | 25.0% |
| !! | AAAGAAATAAAGAAGTGCAA+GGG | + | chr2_3:12068739-12068758 | None:intergenic | 25.0% |
| !! | AAAAGAAATAAAGAAGTGCA+AGG | + | chr2_3:12068740-12068759 | None:intergenic | 25.0% |
| !! | TTTTCTGTCAATAGAGTTTA+AGG | + | chr2_3:12068809-12068828 | None:intergenic | 25.0% |
| !!! | AACTATCTTCTAAAGTAGTT+CGG | + | chr2_3:12068877-12068896 | None:intergenic | 25.0% |
| !! | AACTAAATTTTCAGCGATTA+TGG | - | chr2_3:12068933-12068952 | Msa0278910:intron | 25.0% |
| !!! | TAAAGCAATAGAGTTTTTAG+GGG | + | chr2_3:12068999-12069018 | None:intergenic | 25.0% |
| !! | CTAAAGCAATAGAGTTTTTA+GGG | + | chr2_3:12069000-12069019 | None:intergenic | 25.0% |
| !!! | TCTAAAGCAATAGAGTTTTT+AGG | + | chr2_3:12069001-12069020 | None:intergenic | 25.0% |
| ! | ATGTTAAGTGATTAAAGTGA+AGG | - | chr2_3:12069092-12069111 | Msa0278910:CDS | 25.0% |
| !!! | AATGAAATTAGCCTTCTAAA+TGG | + | chr2_3:12069245-12069264 | None:intergenic | 25.0% |
| ! | TACAATTTCTGTTTAGATTG+AGG | - | chr2_3:12069541-12069560 | Msa0278910:intron | 25.0% |
| ! | TTCAAAATTCTCAAACAATC+GGG | + | chr2_3:12069973-12069992 | None:intergenic | 25.0% |
| ! | TTTTGATGAGACAGATACAA+AGG | + | chr2_3:12065401-12065420 | None:intergenic | 30.0% |
| AGAAGTTTAAAGATAGTGCT+AGG | - | chr2_3:12065696-12065715 | Msa0278910:CDS | 30.0% | |
| !!! | GCTTGTGTTATTTTGTGTTT+TGG | - | chr2_3:12065903-12065922 | Msa0278910:intron | 30.0% |
| ATCAATCAATTTGGCCAAAA+GGG | + | chr2_3:12066067-12066086 | None:intergenic | 30.0% | |
| AATCAATCAATTTGGCCAAA+AGG | + | chr2_3:12066068-12066087 | None:intergenic | 30.0% | |
| TTTGGCCAAATTGATTGATT+TGG | - | chr2_3:12066068-12066087 | Msa0278910:intron | 30.0% | |
| ! | TTGGCCAAATTGATTGATTT+GGG | - | chr2_3:12066069-12066088 | Msa0278910:intron | 30.0% |
| !! | TTGATTTGGGTGTGTTATTT+AGG | - | chr2_3:12066082-12066101 | Msa0278910:intron | 30.0% |
| !! | TGATTTGGGTGTGTTATTTA+GGG | - | chr2_3:12066083-12066102 | Msa0278910:intron | 30.0% |
| TTTATCTGAGGATGATTCTA+AGG | - | chr2_3:12066173-12066192 | Msa0278910:intron | 30.0% | |
| TTATCTGAGGATGATTCTAA+GGG | - | chr2_3:12066174-12066193 | Msa0278910:intron | 30.0% | |
| !!! | AAGTAGACAGATTTTGACTT+TGG | - | chr2_3:12066332-12066351 | Msa0278910:intron | 30.0% |
| ! | CAAAAGTACAAGCCTATTTA+TGG | - | chr2_3:12066812-12066831 | Msa0278910:intron | 30.0% |
| TATTTATGGCCAAATCTGTA+GGG | - | chr2_3:12066826-12066845 | Msa0278910:intron | 30.0% | |
| TTGATCGAACGATTAAGATA+TGG | - | chr2_3:12066989-12067008 | Msa0278910:intron | 30.0% | |
| GATTAAGATATGGAATGTTG+AGG | - | chr2_3:12066999-12067018 | Msa0278910:intron | 30.0% | |
| ACTTACATGAATACTCTGTT+TGG | - | chr2_3:12067027-12067046 | Msa0278910:intron | 30.0% | |
| TACTTAATACTTCACTTTGG+TGG | + | chr2_3:12067053-12067072 | None:intergenic | 30.0% | |
| TTGATTGTTTACGCAAAGAA+AGG | - | chr2_3:12067073-12067092 | Msa0278910:intron | 30.0% | |
| TGATTGTTTACGCAAAGAAA+GGG | - | chr2_3:12067074-12067093 | Msa0278910:intron | 30.0% | |
| AACATCCGACATATACAATA+TGG | + | chr2_3:12067183-12067202 | None:intergenic | 30.0% | |
| ! | ATTTTCCAAAAACAGAGCAA+TGG | + | chr2_3:12067221-12067240 | None:intergenic | 30.0% |
| AACAAAACAACAGCATTCTA+AGG | + | chr2_3:12067415-12067434 | None:intergenic | 30.0% | |
| AATAATGAGGAATTCTTGTC+TGG | - | chr2_3:12067435-12067454 | Msa0278910:intron | 30.0% | |
| ! | AGAAGCCTATTCATATTTTG+AGG | - | chr2_3:12067499-12067518 | Msa0278910:intron | 30.0% |
| GCATTCCTCAAAATATGAAT+AGG | + | chr2_3:12067507-12067526 | None:intergenic | 30.0% | |
| CAGTATTTAAAGGTTTACCT+AGG | + | chr2_3:12067596-12067615 | None:intergenic | 30.0% | |
| TTTCTGCATAGTGAAGATAA+TGG | + | chr2_3:12067808-12067827 | None:intergenic | 30.0% | |
| TATCTTCACTATGCAGAAAA+TGG | - | chr2_3:12067809-12067828 | Msa0278910:intron | 30.0% | |
| ATGAAGAGGTTTAATGTCTT+TGG | + | chr2_3:12067972-12067991 | None:intergenic | 30.0% | |
| ATTGGATTCATATTCATGCT+TGG | - | chr2_3:12068039-12068058 | Msa0278910:CDS | 30.0% | |
| ! | AAATCTTTTGTATCACAGGT+TGG | - | chr2_3:12068098-12068117 | Msa0278910:CDS | 30.0% |
| ! | AATCTTTTGTATCACAGGTT+GGG | - | chr2_3:12068099-12068118 | Msa0278910:CDS | 30.0% |
| !!! | CTTTTTCAAGGAGAATAAGT+GGG | - | chr2_3:12068467-12068486 | Msa0278910:CDS | 30.0% |
| !!! | TTTTTCAAGGAGAATAAGTG+GGG | - | chr2_3:12068468-12068487 | Msa0278910:CDS | 30.0% |
| ACATGCATTATTATATGCAG+GGG | + | chr2_3:12068515-12068534 | None:intergenic | 30.0% | |
| GACATGCATTATTATATGCA+GGG | + | chr2_3:12068516-12068535 | None:intergenic | 30.0% | |
| ! | GAGAGTATGATAACATAGAT+TGG | - | chr2_3:12068582-12068601 | Msa0278910:CDS | 30.0% |
| ! | ATTGTATTGTAGAAGGGTTT+TGG | + | chr2_3:12068632-12068651 | None:intergenic | 30.0% |
| !!! | TTTTTAGTTTCCCCATTTTG+AGG | - | chr2_3:12068652-12068671 | Msa0278910:intron | 30.0% |
| !!! | TTTTAGTTTCCCCATTTTGA+GGG | - | chr2_3:12068653-12068672 | Msa0278910:intron | 30.0% |
| ATACAAAATCCCCTCAAAAT+GGG | + | chr2_3:12068666-12068685 | None:intergenic | 30.0% | |
| AATACAAAATCCCCTCAAAA+TGG | + | chr2_3:12068667-12068686 | None:intergenic | 30.0% | |
| !! | AAAGCAATAGAGTTTTTAGG+GGG | + | chr2_3:12068998-12069017 | None:intergenic | 30.0% |
| TTAATAACATTAAGGGTCTC+AGG | - | chr2_3:12069117-12069136 | Msa0278910:CDS | 30.0% | |
| ACAAGTCTACTTCGTATAAT+TGG | + | chr2_3:12069288-12069307 | None:intergenic | 30.0% | |
| TCAAACAATTTGATCGTCAA+TGG | + | chr2_3:12069399-12069418 | None:intergenic | 30.0% | |
| TAAGGTTAAAAGCAAGAGTT+AGG | + | chr2_3:12069453-12069472 | None:intergenic | 30.0% | |
| GATTTACAGAAAGGATGTTT+AGG | - | chr2_3:12069501-12069520 | Msa0278910:intron | 30.0% | |
| TCTCATGATGACAATTTAAG+TGG | + | chr2_3:12069828-12069847 | None:intergenic | 30.0% | |
| GCAATTAGTCAAAATTGAAG+AGG | + | chr2_3:12069872-12069891 | None:intergenic | 30.0% | |
| ! | GAATTTTGAATCATGATACG+AGG | - | chr2_3:12069983-12070002 | Msa0278910:CDS | 30.0% |
| TTGTAGACATTTGTTCACAT+AGG | - | chr2_3:12070078-12070097 | Msa0278910:five_prime_UTR | 30.0% | |
| GATTAGGGTTTCAGAGATTT+GGG | + | chr2_3:12065450-12065469 | None:intergenic | 35.0% | |
| TGATTAGGGTTTCAGAGATT+TGG | + | chr2_3:12065451-12065470 | None:intergenic | 35.0% | |
| !! | GATAGTGATTTTGACGAAGA+TGG | - | chr2_3:12065584-12065603 | Msa0278910:three_prime_UTR | 35.0% |
| CAAAGAGATGAAGATGATGA+TGG | - | chr2_3:12065731-12065750 | Msa0278910:CDS | 35.0% | |
| ! | TGATGATGATGATGAAGATG+AGG | - | chr2_3:12065757-12065776 | Msa0278910:intron | 35.0% |
| ! | ATGATGATGAAGATGAGGAT+GGG | - | chr2_3:12065762-12065781 | Msa0278910:intron | 35.0% |
| TCAGAAAAGCTATTGCTTCA+AGG | - | chr2_3:12065843-12065862 | Msa0278910:intron | 35.0% | |
| ! | TGATTTCAATGTGACCCTTT+TGG | - | chr2_3:12065997-12066016 | Msa0278910:intron | 35.0% |
| CACACCCAAATCAATCAATT+TGG | + | chr2_3:12066076-12066095 | None:intergenic | 35.0% | |
| TATCTGAGGATGATTCTAAG+GGG | - | chr2_3:12066175-12066194 | Msa0278910:intron | 35.0% | |
| !!! | TGTTGGATATTTTTTTGGGG+TGG | - | chr2_3:12066521-12066540 | Msa0278910:intron | 35.0% |
| GAATAGATTAGTACAGCTCT+AGG | - | chr2_3:12066543-12066562 | Msa0278910:intron | 35.0% | |
| TTATACTCCTTTCCCTTGTT+TGG | - | chr2_3:12066611-12066630 | Msa0278910:intron | 35.0% | |
| CTACAGATTTGGCCATAAAT+AGG | + | chr2_3:12066827-12066846 | None:intergenic | 35.0% | |
| CTATTTATGGCCAAATCTGT+AGG | - | chr2_3:12066825-12066844 | Msa0278910:intron | 35.0% | |
| !! | TAGTTGGGACTTGTTATTGT+TGG | - | chr2_3:12066861-12066880 | Msa0278910:intron | 35.0% |
| !!! | TGTTTCTTCTCTGGCTTTTA+GGG | - | chr2_3:12066936-12066955 | Msa0278910:intron | 35.0% |
| AAACGATCCAGAAAATAGCT+CGG | + | chr2_3:12066971-12066990 | None:intergenic | 35.0% | |
| !! | AAAGAAAGGGTATTATCTGC+TGG | - | chr2_3:12067087-12067106 | Msa0278910:intron | 35.0% |
| TCGTAGTATGCAGTTGTTTA+AGG | - | chr2_3:12067116-12067135 | Msa0278910:intron | 35.0% | |
| ! | AAGAAACAGCCTTTGAAGAT+AGG | + | chr2_3:12067276-12067295 | None:intergenic | 35.0% |
| !! | TATCTTCAAAGGCTGTTTCT+TGG | - | chr2_3:12067275-12067294 | Msa0278910:intron | 35.0% |
| !! | ATCTTCAAAGGCTGTTTCTT+GGG | - | chr2_3:12067276-12067295 | Msa0278910:intron | 35.0% |
| GAAAAAGTCTCATGAGGAAA+TGG | + | chr2_3:12067314-12067333 | None:intergenic | 35.0% | |
| CATTCAGAAAAAGTCTCATG+AGG | + | chr2_3:12067320-12067339 | None:intergenic | 35.0% | |
| GATAGTGAAATACTACCCAA+CGG | - | chr2_3:12067567-12067586 | Msa0278910:CDS | 35.0% | |
| ATTGCAGTTGGAAATTTCAC+TGG | - | chr2_3:12068067-12068086 | Msa0278910:CDS | 35.0% | |
| !! | GCTAGAATTCACCTTTTTCA+AGG | - | chr2_3:12068432-12068451 | Msa0278910:CDS | 35.0% |
| CCACTTATTCTCCTTGAAAA+AGG | + | chr2_3:12068469-12068488 | None:intergenic | 35.0% | |
| !!! | CCTTTTTCAAGGAGAATAAG+TGG | - | chr2_3:12068466-12068485 | Msa0278910:CDS | 35.0% |
| GGACATGCATTATTATATGC+AGG | + | chr2_3:12068517-12068536 | None:intergenic | 35.0% | |
| !!! | TATTGTAGAAGGGTTTTGGA+GGG | + | chr2_3:12068628-12068647 | None:intergenic | 35.0% |
| !! | TTTAGTTTCCCCATTTTGAG+GGG | - | chr2_3:12068654-12068673 | Msa0278910:intron | 35.0% |
| TACAAAATCCCCTCAAAATG+GGG | + | chr2_3:12068665-12068684 | None:intergenic | 35.0% | |
| !!! | TTTTAGGGGGTAAGAGTATT+AGG | + | chr2_3:12068985-12069004 | None:intergenic | 35.0% |
| TTAGAGTGCATTTGATAGAG+TGG | - | chr2_3:12069016-12069035 | Msa0278910:intron | 35.0% | |
| !!! | ATTTTGGGATGTAATTGTGG+TGG | + | chr2_3:12069184-12069203 | None:intergenic | 35.0% |
| ACCACAATTACATCCCAAAA+TGG | - | chr2_3:12069183-12069202 | Msa0278910:CDS | 35.0% | |
| !!! | TCCATTTTGGGATGTAATTG+TGG | + | chr2_3:12069187-12069206 | None:intergenic | 35.0% |
| ! | GCTGTAGCAATATCCATTTT+GGG | + | chr2_3:12069199-12069218 | None:intergenic | 35.0% |
| CAAAATGGATATTGCTACAG+CGG | - | chr2_3:12069198-12069217 | Msa0278910:CDS | 35.0% | |
| TGAATAATTGCAGCTGTTGT+TGG | - | chr2_3:12069362-12069381 | Msa0278910:CDS | 35.0% | |
| AAAGCAAGAGTTAGGTTTGA+CGG | + | chr2_3:12069445-12069464 | None:intergenic | 35.0% | |
| ! | TTTGACTTCAGCTATGCTTA+AGG | + | chr2_3:12069471-12069490 | None:intergenic | 35.0% |
| CATAGCTGAAGTCAAATGTT+GGG | - | chr2_3:12069475-12069494 | Msa0278910:intron | 35.0% | |
| !! | ACGTTCATTAGTTTGTTGTC+TGG | - | chr2_3:12069611-12069630 | Msa0278910:intron | 35.0% |
| ! | TCAAGTGAGATGATTGATTC+AGG | + | chr2_3:12069644-12069663 | None:intergenic | 35.0% |
| AACTAACAGCTTTGCATAAG+TGG | - | chr2_3:12069683-12069702 | Msa0278910:CDS | 35.0% | |
| AATTGTCATCATGAGATCTG+AGG | - | chr2_3:12069832-12069851 | Msa0278910:CDS | 35.0% | |
| AGATACAAAGGTTGCAGCTA+GGG | + | chr2_3:12065389-12065408 | None:intergenic | 40.0% | |
| CTCAGCATCTTGATCTTCAT+CGG | + | chr2_3:12065555-12065574 | None:intergenic | 40.0% | |
| !!! | GATGGTTTTGTTCCATCGAA+AGG | - | chr2_3:12065602-12065621 | Msa0278910:three_prime_UTR | 40.0% |
| TTTGTTCCATCGAAAGGTGA+AGG | - | chr2_3:12065608-12065627 | Msa0278910:three_prime_UTR | 40.0% | |
| TTGTTCCATCGAAAGGTGAA+GGG | - | chr2_3:12065609-12065628 | Msa0278910:three_prime_UTR | 40.0% | |
| ! | GATGATGATGAAGATGAGGA+TGG | - | chr2_3:12065761-12065780 | Msa0278910:intron | 40.0% |
| ! | TGATGATGAAGATGAGGATG+GGG | - | chr2_3:12065763-12065782 | Msa0278910:intron | 40.0% |
| TTGCTGCTCCTTTATCATCT+TGG | + | chr2_3:12065807-12065826 | None:intergenic | 40.0% | |
| ! | TGATTTCAATGCGACCCTTT+TGG | - | chr2_3:12065946-12065965 | Msa0278910:intron | 40.0% |
| AGGGTTAAATTGGATGGTGA+TGG | - | chr2_3:12066102-12066121 | Msa0278910:intron | 40.0% | |
| !! | GTTAAATTGGATGGTGATGG+TGG | - | chr2_3:12066105-12066124 | Msa0278910:intron | 40.0% |
| ! | GCATAAACAATGTGTCACTG+CGG | - | chr2_3:12066146-12066165 | Msa0278910:intron | 40.0% |
| !! | GGATGATTCTAAGGGGTTTT+CGG | - | chr2_3:12066182-12066201 | Msa0278910:intron | 40.0% |
| !! | AAGATGGAAGCATTGTGCAA+TGG | - | chr2_3:12066211-12066230 | Msa0278910:intron | 40.0% |
| !! | AGATGGAAGCATTGTGCAAT+GGG | - | chr2_3:12066212-12066231 | Msa0278910:intron | 40.0% |
| ! | GGAAATGTGAGAGGTATAAG+TGG | - | chr2_3:12066247-12066266 | Msa0278910:intron | 40.0% |
| ! | GTATAAGTGGCCCATTGATT+CGG | - | chr2_3:12066260-12066279 | Msa0278910:intron | 40.0% |
| GACTTCAGAACCGAATCAAT+GGG | + | chr2_3:12066273-12066292 | None:intergenic | 40.0% | |
| AGACTTCAGAACCGAATCAA+TGG | + | chr2_3:12066274-12066293 | None:intergenic | 40.0% | |
| ! | TTTGACTTTGGCTGCAAGTT+CGG | - | chr2_3:12066344-12066363 | Msa0278910:intron | 40.0% |
| AACGTTACCAAACAAGGGAA+AGG | + | chr2_3:12066621-12066640 | None:intergenic | 40.0% | |
| GAACGAACGTTACCAAACAA+GGG | + | chr2_3:12066626-12066645 | None:intergenic | 40.0% | |
| AGAACGAACGTTACCAAACA+AGG | + | chr2_3:12066627-12066646 | None:intergenic | 40.0% | |
| AGTCCAATACCCTACAGATT+TGG | + | chr2_3:12066838-12066857 | None:intergenic | 40.0% | |
| !! | AGGGTATTGGACTGTTTAGT+TGG | - | chr2_3:12066845-12066864 | Msa0278910:intron | 40.0% |
| !! | GGGTATTGGACTGTTTAGTT+GGG | - | chr2_3:12066846-12066865 | Msa0278910:intron | 40.0% |
| ! | TTTTGTCCATCGTCTTTTGC+AGG | - | chr2_3:12066891-12066910 | Msa0278910:intron | 40.0% |
| CTAAAAGCCAGAGAAGAAAC+AGG | + | chr2_3:12066937-12066956 | None:intergenic | 40.0% | |
| !!! | CTGTTTCTTCTCTGGCTTTT+AGG | - | chr2_3:12066935-12066954 | Msa0278910:intron | 40.0% |
| ACAACTGCATACTACGATCA+CGG | + | chr2_3:12067113-12067132 | None:intergenic | 40.0% | |
| TCCAAAAACAGAGCAATGGT+GGG | + | chr2_3:12067217-12067236 | None:intergenic | 40.0% | |
| TTCCAAAAACAGAGCAATGG+TGG | + | chr2_3:12067218-12067237 | None:intergenic | 40.0% | |
| TGAGGAATTCTTGTCTGGTT+CGG | - | chr2_3:12067440-12067459 | Msa0278910:intron | 40.0% | |
| ! | ATGATGGTAGCATTGAGCTT+TGG | - | chr2_3:12067463-12067482 | Msa0278910:intron | 40.0% |
| ! | TGATGGTAGCATTGAGCTTT+GGG | - | chr2_3:12067464-12067483 | Msa0278910:intron | 40.0% |
| TGACGAACAATGGTGATTCT+CGG | + | chr2_3:12067846-12067865 | None:intergenic | 40.0% | |
| ! | AAGAGTGTACTGACGAACAA+TGG | + | chr2_3:12067856-12067875 | None:intergenic | 40.0% |
| ATTGTTCGTCAGTACACTCT+TGG | - | chr2_3:12067855-12067874 | Msa0278910:intron | 40.0% | |
| TTGTTCGTCAGTACACTCTT+GGG | - | chr2_3:12067856-12067875 | Msa0278910:intron | 40.0% | |
| ACCTCTTCATAATGTACCGT+TGG | - | chr2_3:12067982-12068001 | Msa0278910:CDS | 40.0% | |
| ACCAACGGTACATTATGAAG+AGG | + | chr2_3:12067986-12068005 | None:intergenic | 40.0% | |
| ! | ATGTACCGTTGGTAAGTAGA+AGG | - | chr2_3:12067993-12068012 | Msa0278910:CDS | 40.0% |
| GCTATCCTTCTACTTACCAA+CGG | + | chr2_3:12068001-12068020 | None:intergenic | 40.0% | |
| GGTTGGGTTTGTGAATTCTT+TGG | - | chr2_3:12068115-12068134 | Msa0278910:CDS | 40.0% | |
| TCAGCAAAATTCCTAGTTGC+TGG | - | chr2_3:12068149-12068168 | Msa0278910:intron | 40.0% | |
| AAATTCCTAGTTGCTGGAGT+TGG | - | chr2_3:12068155-12068174 | Msa0278910:intron | 40.0% | |
| AATTCCTAGTTGCTGGAGTT+GGG | - | chr2_3:12068156-12068175 | Msa0278910:intron | 40.0% | |
| !! | TTTCTCTTTGGCTCTGCTTA+CGG | - | chr2_3:12068250-12068269 | Msa0278910:intron | 40.0% |
| !! | TTTTTGGTCAAGTAGCCTAG+TGG | - | chr2_3:12068410-12068429 | Msa0278910:CDS | 40.0% |
| AAAGGTGAATTCTAGCCACT+AGG | + | chr2_3:12068428-12068447 | None:intergenic | 40.0% | |
| !! | GTATTGTAGAAGGGTTTTGG+AGG | + | chr2_3:12068629-12068648 | None:intergenic | 40.0% |
| ! | AAAGAAGTGCAAGGGATGAA+GGG | + | chr2_3:12068731-12068750 | None:intergenic | 40.0% |
| ! | TAAAGAAGTGCAAGGGATGA+AGG | + | chr2_3:12068732-12068751 | None:intergenic | 40.0% |
| TTTGCAAGTTTAGAGGGGAA+GGG | + | chr2_3:12068781-12068800 | None:intergenic | 40.0% | |
| CTCTGTTTGCAAGTTTAGAG+GGG | + | chr2_3:12068786-12068805 | None:intergenic | 40.0% | |
| GCTCTGTTTGCAAGTTTAGA+GGG | + | chr2_3:12068787-12068806 | None:intergenic | 40.0% | |
| ! | CGCTGTAGCAATATCCATTT+TGG | + | chr2_3:12069200-12069219 | None:intergenic | 40.0% |
| GCATAGCTGAAGTCAAATGT+TGG | - | chr2_3:12069474-12069493 | Msa0278910:intron | 40.0% | |
| GTTGGGAGTGATTTACAGAA+AGG | - | chr2_3:12069492-12069511 | Msa0278910:intron | 40.0% | |
| ! | TTTTTACAGGAACCTCGTCT+AGG | - | chr2_3:12069756-12069775 | Msa0278910:CDS | 40.0% |
| AGAATACGTGAAGCTCGTAA+TGG | - | chr2_3:12069789-12069808 | Msa0278910:CDS | 40.0% | |
| !!! | CCTCAAGTCTTTTTCAACGT+AGG | + | chr2_3:12070011-12070030 | None:intergenic | 40.0% |
| CCTACGTTGAAAAAGACTTG+AGG | - | chr2_3:12070008-12070027 | Msa0278910:CDS | 40.0% | |
| CAGATACAAAGGTTGCAGCT+AGG | + | chr2_3:12065390-12065409 | None:intergenic | 45.0% | |
| GTTCTTTGCGGGCATGATTA+GGG | + | chr2_3:12065465-12065484 | None:intergenic | 45.0% | |
| TGTTCTTTGCGGGCATGATT+AGG | + | chr2_3:12065466-12065485 | None:intergenic | 45.0% | |
| TTCTTGCGGTTGTTCTTTGC+GGG | + | chr2_3:12065476-12065495 | None:intergenic | 45.0% | |
| CTTCTTGCGGTTGTTCTTTG+CGG | + | chr2_3:12065477-12065496 | None:intergenic | 45.0% | |
| AGCATCTTGATCTTCATCGG+CGG | + | chr2_3:12065552-12065571 | None:intergenic | 45.0% | |
| TGTTCCATCGAAAGGTGAAG+GGG | - | chr2_3:12065610-12065629 | Msa0278910:three_prime_UTR | 45.0% | |
| AGGAAACTACAGCTGAAGCT+AGG | - | chr2_3:12065648-12065667 | Msa0278910:three_prime_UTR | 45.0% | |
| AGATAGTGCTAGGAGAGAGA+AGG | - | chr2_3:12065706-12065725 | Msa0278910:CDS | 45.0% | |
| GCTGTCGACCAAGATGATAA+AGG | - | chr2_3:12065796-12065815 | Msa0278910:intron | 45.0% | |
| GATGATAAAGGAGCAGCAAG+AGG | - | chr2_3:12065808-12065827 | Msa0278910:intron | 45.0% | |
| ! | TAAACAATGTGTCACTGCGG+TGG | - | chr2_3:12066149-12066168 | Msa0278910:intron | 45.0% |
| TGCAATGGGATGTTGAGAGT+GGG | - | chr2_3:12066226-12066245 | Msa0278910:intron | 45.0% | |
| TTGAGAGTGGGAAATGTGAG+AGG | - | chr2_3:12066238-12066257 | Msa0278910:intron | 45.0% | |
| !! | GATTCGGTTCTGAAGTCTCA+TGG | - | chr2_3:12066276-12066295 | Msa0278910:intron | 45.0% |
| ! | TCTGAAGTCTCATGGCTTGA+AGG | - | chr2_3:12066284-12066303 | Msa0278910:intron | 45.0% |
| TGCTTTGTAGCAGAACCTTG+AGG | + | chr2_3:12066312-12066331 | None:intergenic | 45.0% | |
| AAGTTCGGATGGTCGCTATT+TGG | - | chr2_3:12066359-12066378 | Msa0278910:intron | 45.0% | |
| ATGGTCGCTATTTGGCAACT+GGG | - | chr2_3:12066367-12066386 | Msa0278910:intron | 45.0% | |
| ATATATGGGATACGCGCACT+AGG | - | chr2_3:12066409-12066428 | Msa0278910:intron | 45.0% | |
| TATATGGGATACGCGCACTA+GGG | - | chr2_3:12066410-12066429 | Msa0278910:intron | 45.0% | |
| TGGCCAAATCTGTAGGGTAT+TGG | - | chr2_3:12066832-12066851 | Msa0278910:intron | 45.0% | |
| GAAAAGCCTGCAAAAGACGA+TGG | + | chr2_3:12066900-12066919 | None:intergenic | 45.0% | |
| ! | TAGAGGTCCTGTTTCTTCTC+TGG | - | chr2_3:12066927-12066946 | Msa0278910:intron | 45.0% |
| !!! | TCTTCTCTGGCTTTTAGGGA+AGG | - | chr2_3:12066940-12066959 | Msa0278910:intron | 45.0% |
| !!! | GGAAGTACCGAGCTATTTTC+TGG | - | chr2_3:12066961-12066980 | Msa0278910:intron | 45.0% |
| ! | TCCCACCATTGCTCTGTTTT+TGG | - | chr2_3:12067213-12067232 | Msa0278910:intron | 45.0% |
| ! | CAGCATTCTAAGGAAGATGC+AGG | + | chr2_3:12067405-12067424 | None:intergenic | 45.0% |
| !! | TTCTTGTCTGGTTCGGATGA+TGG | - | chr2_3:12067447-12067466 | Msa0278910:intron | 45.0% |
| ! | GATGGTAGCATTGAGCTTTG+GGG | - | chr2_3:12067465-12067484 | Msa0278910:intron | 45.0% |
| ATACTACCCAACGGTAACCT+AGG | - | chr2_3:12067576-12067595 | Msa0278910:CDS | 45.0% | |
| GGTTTACCTAGGTTACCGTT+GGG | + | chr2_3:12067585-12067604 | None:intergenic | 45.0% | |
| AGGTTTACCTAGGTTACCGT+TGG | + | chr2_3:12067586-12067605 | None:intergenic | 45.0% | |
| AACAATGGTGATTCTCGGGA+TGG | + | chr2_3:12067841-12067860 | None:intergenic | 45.0% | |
| GACGAACAATGGTGATTCTC+GGG | + | chr2_3:12067845-12067864 | None:intergenic | 45.0% | |
| AAGGTCACTGTTCCTACAGA+CGG | + | chr2_3:12067894-12067913 | None:intergenic | 45.0% | |
| TGCTTGGCTGTAATTGCAGT+TGG | - | chr2_3:12068055-12068074 | Msa0278910:CDS | 45.0% | |
| !! | TTCTCTTTGGCTCTGCTTAC+GGG | - | chr2_3:12068251-12068270 | Msa0278910:intron | 45.0% |
| ATTATTATATGCAGGGGCCG+GGG | + | chr2_3:12068509-12068528 | None:intergenic | 45.0% | |
| CATTATTATATGCAGGGGCC+GGG | + | chr2_3:12068510-12068529 | None:intergenic | 45.0% | |
| GCATTATTATATGCAGGGGC+CGG | + | chr2_3:12068511-12068530 | None:intergenic | 45.0% | |
| ! | TGCAAGGGATGAAGGGTTTT+GGG | + | chr2_3:12068724-12068743 | None:intergenic | 45.0% |
| GTTTGCAAGTTTAGAGGGGA+AGG | + | chr2_3:12068782-12068801 | None:intergenic | 45.0% | |
| GGCTCTGTTTGCAAGTTTAG+AGG | + | chr2_3:12068788-12068807 | None:intergenic | 45.0% | |
| AAGGGTCTCAGGTCTAGATT+TGG | - | chr2_3:12069128-12069147 | Msa0278910:CDS | 45.0% | |
| CACTCACTCAGTTAGGTTTC+AGG | - | chr2_3:12069154-12069173 | Msa0278910:CDS | 45.0% | |
| TAGGCATCTATGAGTAAGCG+AGG | - | chr2_3:12070097-12070116 | Msa0278910:five_prime_UTR | 45.0% | |
| TCTATGAGTAAGCGAGGCTT+TGG | - | chr2_3:12070103-12070122 | Msa0278910:five_prime_UTR | 45.0% | |
| !!! | CAATATATATTTTTTTTTTT+TGG | - | chr2_3:12068394-12068413 | Msa0278910:CDS | 5.0% |
| GGTCGCGTGAATTCTTCTTG+CGG | + | chr2_3:12065490-12065509 | None:intergenic | 50.0% | |
| !! | GCGACCCATTTTTCGACGAT+GGG | - | chr2_3:12065504-12065523 | Msa0278910:three_prime_UTR | 50.0% |
| TGGGCCCATCGTCGAAAAAT+GGG | + | chr2_3:12065511-12065530 | None:intergenic | 50.0% | |
| TGTTCCCCTTCACCTTTCGA+TGG | + | chr2_3:12065617-12065636 | None:intergenic | 50.0% | |
| ATCGAAAGGTGAAGGGGAAC+AGG | - | chr2_3:12065616-12065635 | Msa0278910:three_prime_UTR | 50.0% | |
| AGCTAGGAAGAGAGTAGCTG+AGG | - | chr2_3:12065664-12065683 | Msa0278910:exon | 50.0% | |
| ! | GGGTTTTCGGCTTCGAAAGA+TGG | - | chr2_3:12066195-12066214 | Msa0278910:intron | 50.0% |
| GTGCAATGGGATGTTGAGAG+TGG | - | chr2_3:12066225-12066244 | Msa0278910:intron | 50.0% | |
| CATGGCTTGAAGGATCCTCA+AGG | - | chr2_3:12066294-12066313 | Msa0278910:intron | 50.0% | |
| ACTTTGGCTGCAAGTTCGGA+TGG | - | chr2_3:12066348-12066367 | Msa0278910:intron | 50.0% | |
| GATGGTCGCTATTTGGCAAC+TGG | - | chr2_3:12066366-12066385 | Msa0278910:intron | 50.0% | |
| TGGTCGCTATTTGGCAACTG+GGG | - | chr2_3:12066368-12066387 | Msa0278910:intron | 50.0% | |
| ! | CGTCTTTTGCAGGCTTTTCC+TGG | - | chr2_3:12066901-12066920 | Msa0278910:intron | 50.0% |
| ! | CAGGCTTTTCCTGGTCATAG+AGG | - | chr2_3:12066910-12066929 | Msa0278910:intron | 50.0% |
| GAAACAGGACCTCTATGACC+AGG | + | chr2_3:12066922-12066941 | None:intergenic | 50.0% | |
| AATGGTGATTCTCGGGATGG+TGG | + | chr2_3:12067838-12067857 | None:intergenic | 50.0% | |
| !! | TTTGGCTCTGCTTACGGGTT+CGG | - | chr2_3:12068256-12068275 | Msa0278910:intron | 50.0% |
| ! | AGGAGAATAAGTGGGGTGTC+CGG | - | chr2_3:12068475-12068494 | Msa0278910:CDS | 50.0% |
| TGAGCATAGCTCAGTTGGGA+GGG | + | chr2_3:12068538-12068557 | None:intergenic | 50.0% | |
| TCCCAACTGAGCTATGCTCA+CGG | - | chr2_3:12068538-12068557 | Msa0278910:CDS | 50.0% | |
| !!! | AGGGATGAAGGGTTTTGGGA+GGG | + | chr2_3:12068720-12068739 | None:intergenic | 50.0% |
| !!! | AAGGGATGAAGGGTTTTGGG+AGG | + | chr2_3:12068721-12068740 | None:intergenic | 50.0% |
| ! | GTGCAAGGGATGAAGGGTTT+TGG | + | chr2_3:12068725-12068744 | None:intergenic | 50.0% |
| AGTTTAGAGGGGAAGGGAGA+GGG | + | chr2_3:12068775-12068794 | None:intergenic | 50.0% | |
| AAGTTTAGAGGGGAAGGGAG+AGG | + | chr2_3:12068776-12068795 | None:intergenic | 50.0% | |
| TTGGCTGCACTCACTCAGTT+AGG | - | chr2_3:12069147-12069166 | Msa0278910:CDS | 50.0% | |
| GATATTGCTACAGCGGCTGA+CGG | - | chr2_3:12069205-12069224 | Msa0278910:CDS | 50.0% | |
| TACAGGAACCTCGTCTAGGA+AGG | - | chr2_3:12069760-12069779 | Msa0278910:CDS | 50.0% | |
| !! | CGCGACCCATTTTTCGACGA+TGG | - | chr2_3:12065503-12065522 | Msa0278910:three_prime_UTR | 55.0% |
| GTGGGCCCATCGTCGAAAAA+TGG | + | chr2_3:12065512-12065531 | None:intergenic | 55.0% | |
| AGGGGAACAGGAGTCTGAAG+AGG | - | chr2_3:12065628-12065647 | Msa0278910:three_prime_UTR | 55.0% | |
| ATGAAGATGAGGATGGGGCG+AGG | - | chr2_3:12065768-12065787 | Msa0278910:intron | 55.0% | |
| TGAAGATGAGGATGGGGCGA+GGG | - | chr2_3:12065769-12065788 | Msa0278910:intron | 55.0% | |
| AAGGAGCAGCAAGAGGAGAG+TGG | - | chr2_3:12065815-12065834 | Msa0278910:intron | 55.0% | |
| !! | CACTGCGGTGGCTTTATCTG+AGG | - | chr2_3:12066161-12066180 | Msa0278910:intron | 55.0% |
| GGTCGCTATTTGGCAACTGG+GGG | - | chr2_3:12066369-12066388 | Msa0278910:intron | 55.0% | |
| TCAGTGCAGTGACCGTCTGT+AGG | - | chr2_3:12067879-12067898 | Msa0278910:intron | 55.0% | |
| AACAGTGACCTTGCCGCATC+TGG | - | chr2_3:12067902-12067921 | Msa0278910:intron | 55.0% | |
| ACCATTACCCGCACCAGATG+CGG | + | chr2_3:12067918-12067937 | None:intergenic | 55.0% | |
| TGCTTACGGGTTCGGAGAGA+AGG | - | chr2_3:12068264-12068283 | Msa0278910:intron | 55.0% | |
| GCTTACGGGTTCGGAGAGAA+GGG | - | chr2_3:12068265-12068284 | Msa0278910:intron | 55.0% | |
| CTTACGGGTTCGGAGAGAAG+GGG | - | chr2_3:12068266-12068285 | Msa0278910:intron | 55.0% | |
| TTTGGGGGGATGGGAGTAGA+GGG | - | chr2_3:12068299-12068318 | Msa0278910:intron | 55.0% | |
| ! | GGAGAATAAGTGGGGTGTCC+GGG | - | chr2_3:12068476-12068495 | Msa0278910:CDS | 55.0% |
| ! | GAGAATAAGTGGGGTGTCCG+GGG | - | chr2_3:12068477-12068496 | Msa0278910:CDS | 55.0% |
| GTGAGCATAGCTCAGTTGGG+AGG | + | chr2_3:12068539-12068558 | None:intergenic | 55.0% | |
| CCCGTGAGCATAGCTCAGTT+GGG | + | chr2_3:12068542-12068561 | None:intergenic | 55.0% | |
| CCCAACTGAGCTATGCTCAC+GGG | - | chr2_3:12068539-12068558 | Msa0278910:CDS | 55.0% | |
| CCAACTGAGCTATGCTCACG+GGG | - | chr2_3:12068540-12068559 | Msa0278910:CDS | 55.0% | |
| !! | TTGGGAGGGGATGGCTTTGA+GGG | + | chr2_3:12068706-12068725 | None:intergenic | 55.0% |
| ! | TTTGGGAGGGGATGGCTTTG+AGG | + | chr2_3:12068707-12068726 | None:intergenic | 55.0% |
| !!! | TGAAGGGTTTTGGGAGGGGA+TGG | + | chr2_3:12068715-12068734 | None:intergenic | 55.0% |
| !!! | GGGATGAAGGGTTTTGGGAG+GGG | + | chr2_3:12068719-12068738 | None:intergenic | 55.0% |
| GAAGGGAGAGGGAGAGCTTT+GGG | + | chr2_3:12068764-12068783 | None:intergenic | 55.0% | |
| AGGAACCTCGTCTAGGAAGG+TGG | - | chr2_3:12069763-12069782 | Msa0278910:CDS | 55.0% | |
| GGAACCTCGTCTAGGAAGGT+GGG | - | chr2_3:12069764-12069783 | Msa0278910:CDS | 55.0% | |
| GAACCTCGTCTAGGAAGGTG+GGG | - | chr2_3:12069765-12069784 | Msa0278910:CDS | 55.0% | |
| GCTACTCTGCGGCGTTTGGT+GGG | + | chr2_3:12065530-12065549 | None:intergenic | 60.0% | |
| CTTCATCGGCGGCTACTCTG+CGG | + | chr2_3:12065541-12065560 | None:intergenic | 60.0% | |
| !! | GCGCACTAGGGAGCATCTTC+AGG | - | chr2_3:12066422-12066441 | Msa0278910:intron | 60.0% |
| TGACCTTGCCGCATCTGGTG+CGG | - | chr2_3:12067907-12067926 | Msa0278910:intron | 60.0% | |
| CCTGCCCAACTCCAGCAACT+AGG | + | chr2_3:12068163-12068182 | None:intergenic | 60.0% | |
| CCTAGTTGCTGGAGTTGGGC+AGG | - | chr2_3:12068160-12068179 | Msa0278910:intron | 60.0% | |
| AGAAGGGGAGGGGAAGGCTT+TGG | - | chr2_3:12068281-12068300 | Msa0278910:intron | 60.0% | |
| GAAGGGGAGGGGAAGGCTTT+GGG | - | chr2_3:12068282-12068301 | Msa0278910:intron | 60.0% | |
| AAGGGGAGGGGAAGGCTTTG+GGG | - | chr2_3:12068283-12068302 | Msa0278910:intron | 60.0% | |
| ! | CTTTGGGGGGATGGGAGTAG+AGG | - | chr2_3:12068298-12068317 | Msa0278910:intron | 60.0% |
| CCCCGTGAGCATAGCTCAGT+TGG | + | chr2_3:12068543-12068562 | None:intergenic | 60.0% | |
| !! | TGGGAGGGGATGGCTTTGAG+GGG | + | chr2_3:12068705-12068724 | None:intergenic | 60.0% |
| GGAAGGGAGAGGGAGAGCTT+TGG | + | chr2_3:12068765-12068784 | None:intergenic | 60.0% | |
| CTTCCCCACCTTCCTAGACG+AGG | + | chr2_3:12069771-12069790 | None:intergenic | 60.0% | |
| GGCTACTCTGCGGCGTTTGG+TGG | + | chr2_3:12065531-12065550 | None:intergenic | 65.0% | |
| GACCTTGCCGCATCTGGTGC+GGG | - | chr2_3:12067908-12067927 | Msa0278910:intron | 65.0% | |
| TACCCGCACCAGATGCGGCA+AGG | + | chr2_3:12067913-12067932 | None:intergenic | 65.0% | |
| GCCGCATCTGGTGCGGGTAA+TGG | - | chr2_3:12067914-12067933 | Msa0278910:intron | 65.0% | |
| ACGGGTTCGGAGAGAAGGGG+AGG | - | chr2_3:12068269-12068288 | Msa0278910:intron | 65.0% | |
| CGGGTTCGGAGAGAAGGGGA+GGG | - | chr2_3:12068270-12068289 | Msa0278910:intron | 65.0% | |
| GGGTTCGGAGAGAAGGGGAG+GGG | - | chr2_3:12068271-12068290 | Msa0278910:intron | 65.0% | |
| TCGGAGAGAAGGGGAGGGGA+AGG | - | chr2_3:12068275-12068294 | Msa0278910:intron | 65.0% | |
| ! | AGGGGAGGGGAAGGCTTTGG+GGG | - | chr2_3:12068284-12068303 | Msa0278910:intron | 65.0% |
| !! | AGGGGAAGGCTTTGGGGGGA+TGG | - | chr2_3:12068289-12068308 | Msa0278910:intron | 65.0% |
| !! | GGGGAAGGCTTTGGGGGGAT+GGG | - | chr2_3:12068290-12068309 | Msa0278910:intron | 65.0% |
| GGCGGCTACTCTGCGGCGTT+TGG | + | chr2_3:12065534-12065553 | None:intergenic | 70.0% | |
| !! | GGGGAGGGGAAGGCTTTGGG+GGG | - | chr2_3:12068285-12068304 | Msa0278910:intron | 70.0% |
| GGTGTCCGGGGTTCGAACCC+CGG | - | chr2_3:12068489-12068508 | Msa0278910:CDS | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | + | chr2_3:12068497-12068516 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 12065380 | 12070135 | 12065380 | ID=Msa0278910;Name=Msa0278910 |
| chr2_3 | mRNA | 12065380 | 12070135 | 12065380 | ID=Msa0278910-mRNA-1;Parent=Msa0278910;Name=Msa0278910-mRNA-1;_AED=0.07;_eAED=0.07;_QI=90|1|1|1|1|1|7|290|504 |
| chr2_3 | exon | 12065380 | 12065750 | 12065380 | ID=Msa0278910-mRNA-1:exon:5438;Parent=Msa0278910-mRNA-1 |
| chr2_3 | exon | 12067334 | 12067399 | 12067334 | ID=Msa0278910-mRNA-1:exon:5437;Parent=Msa0278910-mRNA-1 |
| chr2_3 | exon | 12067512 | 12067690 | 12067512 | ID=Msa0278910-mRNA-1:exon:5436;Parent=Msa0278910-mRNA-1 |
| chr2_3 | exon | 12067918 | 12068146 | 12067918 | ID=Msa0278910-mRNA-1:exon:5435;Parent=Msa0278910-mRNA-1 |
| chr2_3 | exon | 12068378 | 12068602 | 12068378 | ID=Msa0278910-mRNA-1:exon:5434;Parent=Msa0278910-mRNA-1 |
| chr2_3 | exon | 12069072 | 12069411 | 12069072 | ID=Msa0278910-mRNA-1:exon:5433;Parent=Msa0278910-mRNA-1 |
| chr2_3 | exon | 12069651 | 12070135 | 12069651 | ID=Msa0278910-mRNA-1:exon:5432;Parent=Msa0278910-mRNA-1 |
| chr2_3 | five_prime_UTR | 12070046 | 12070135 | 12070046 | ID=Msa0278910-mRNA-1:five_prime_utr;Parent=Msa0278910-mRNA-1 |
| chr2_3 | CDS | 12069651 | 12070045 | 12069651 | ID=Msa0278910-mRNA-1:cds;Parent=Msa0278910-mRNA-1 |
| chr2_3 | CDS | 12069072 | 12069411 | 12069072 | ID=Msa0278910-mRNA-1:cds;Parent=Msa0278910-mRNA-1 |
| chr2_3 | CDS | 12068378 | 12068602 | 12068378 | ID=Msa0278910-mRNA-1:cds;Parent=Msa0278910-mRNA-1 |
| chr2_3 | CDS | 12067918 | 12068146 | 12067918 | ID=Msa0278910-mRNA-1:cds;Parent=Msa0278910-mRNA-1 |
| chr2_3 | CDS | 12067512 | 12067690 | 12067512 | ID=Msa0278910-mRNA-1:cds;Parent=Msa0278910-mRNA-1 |
| chr2_3 | CDS | 12067334 | 12067399 | 12067334 | ID=Msa0278910-mRNA-1:cds;Parent=Msa0278910-mRNA-1 |
| chr2_3 | CDS | 12065670 | 12065750 | 12065670 | ID=Msa0278910-mRNA-1:cds;Parent=Msa0278910-mRNA-1 |
| chr2_3 | three_prime_UTR | 12065380 | 12065669 | 12065380 | ID=Msa0278910-mRNA-1:three_prime_utr;Parent=Msa0278910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
