Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297630 | XP_003593906.1 | 95.344 | 451 | 19 | 1 | 1 | 451 | 1 | 449 | 0.0 | 866 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297630 | sp|Q9M209|CER7_ARATH | 59.732 | 447 | 149 | 7 | 1 | 435 | 1 | 428 | 4.96e-177 | 505 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297630 | G7IP72 | 95.344 | 451 | 19 | 1 | 1 | 451 | 1 | 449 | 0.0 | 866 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025720 | Msa0297630 | 0.812551 | 4.005840e-51 | -8.615850e-47 |
| Msa0030200 | Msa0297630 | 0.861049 | 1.347688e-63 | -8.615850e-47 |
| Msa0070700 | Msa0297630 | 0.830932 | 2.222486e-55 | -8.615850e-47 |
| Msa0105370 | Msa0297630 | 0.807767 | 4.303952e-50 | -8.615850e-47 |
| Msa0115130 | Msa0297630 | 0.825022 | 5.879342e-54 | -8.615850e-47 |
| Msa0118590 | Msa0297630 | 0.843459 | 1.382811e-58 | -8.615850e-47 |
| Msa0139350 | Msa0297630 | 0.800929 | 1.144203e-48 | -8.615850e-47 |
| Msa0144370 | Msa0297630 | 0.830043 | 3.668079e-55 | -8.615850e-47 |
| Msa0164770 | Msa0297630 | 0.850997 | 1.181877e-60 | -8.615850e-47 |
| Msa0170200 | Msa0297630 | 0.865490 | 5.686237e-65 | -8.615850e-47 |
| Msa0184200 | Msa0297630 | 0.802440 | 5.603549e-49 | -8.615850e-47 |
| Msa0194770 | Msa0297630 | 0.922618 | 7.777543e-89 | -8.615850e-47 |
| Msa0195340 | Msa0297630 | 0.812310 | 4.520287e-51 | -8.615850e-47 |
| Msa0236650 | Msa0297630 | 0.891669 | 3.215290e-74 | -8.615850e-47 |
| Msa0297630 | Msa0335730 | 0.832187 | 1.090983e-55 | -8.615850e-47 |
| Msa0297630 | Msa0403500 | 0.818066 | 2.380009e-52 | -8.615850e-47 |
| Msa0297630 | Msa0449210 | 0.802525 | 5.383907e-49 | -8.615850e-47 |
| Msa0297630 | Msa0482200 | 0.845926 | 2.993320e-59 | -8.615850e-47 |
| Msa0297630 | Msa0485510 | 0.891816 | 2.811130e-74 | -8.615850e-47 |
| Msa0297630 | Msa0573140 | 0.814487 | 1.502771e-51 | -8.615850e-47 |
| Msa0297630 | Msa0573270 | 0.843558 | 1.301816e-58 | -8.615850e-47 |
| Msa0297630 | Msa0583360 | -0.800736 | 1.253256e-48 | -8.615850e-47 |
| Msa0297630 | Msa0648780 | 0.804231 | 2.385321e-49 | -8.615850e-47 |
| Msa0297630 | Msa0659050 | 0.820317 | 7.311150e-53 | -8.615850e-47 |
| Msa0297630 | Msa0660850 | 0.815855 | 7.462521e-52 | -8.615850e-47 |
| Msa0297630 | Msa0687440 | 0.810160 | 1.323616e-50 | -8.615850e-47 |
| Msa0297630 | Msa0704980 | 0.826999 | 1.992789e-54 | -8.615850e-47 |
| Msa0297630 | Msa0745740 | 0.813481 | 2.505056e-51 | -8.615850e-47 |
| Msa0297630 | Msa0755700 | 0.826607 | 2.472195e-54 | -8.615850e-47 |
| Msa0297630 | Msa0757940 | 0.807821 | 4.191893e-50 | -8.615850e-47 |
| Msa0297630 | Msa0799260 | 0.815816 | 7.613653e-52 | -8.615850e-47 |
| Msa0297630 | Msa0799310 | 0.821100 | 4.831656e-53 | -8.615850e-47 |
| Msa0297630 | Msa0826990 | 0.812189 | 4.804964e-51 | -8.615850e-47 |
| Msa0297630 | Msa1025460 | 0.800941 | 1.137952e-48 | -8.615850e-47 |
| Msa0297630 | Msa1083970 | 0.817412 | 3.342045e-52 | -8.615850e-47 |
| Msa0297630 | Msa1112880 | 0.808668 | 2.766311e-50 | -8.615850e-47 |
| Msa0297630 | Msa1153060 | 0.828396 | 9.201371e-55 | -8.615850e-47 |
| Msa0297630 | Msa1155170 | -0.800727 | 1.258458e-48 | -8.615850e-47 |
| Msa0297630 | Msa1209850 | 0.851813 | 6.949426e-61 | -8.615850e-47 |
| Msa0297630 | Msa1225720 | 0.887181 | 1.788318e-72 | -8.615850e-47 |
| Msa0297630 | Msa1225860 | -0.801792 | 7.618916e-49 | -8.615850e-47 |
| Msa0297630 | Msa1258390 | 0.875550 | 2.821944e-68 | -8.615850e-47 |
| Msa0297630 | Msa1303070 | 0.804835 | 1.785383e-49 | -8.615850e-47 |
| Msa0297630 | Msa1370450 | 0.820903 | 5.363851e-53 | -8.615850e-47 |
| Msa0297630 | Msa1382140 | 0.919099 | 6.874064e-87 | -8.615850e-47 |
| Msa0297630 | Msa1383960 | 0.822561 | 2.218083e-53 | -8.615850e-47 |
| Msa0297630 | Msa1444240 | 0.840149 | 1.034882e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297630 | MtrunA17_Chr2g0285831 | 95.344 | 451 | 19 | 1 | 1 | 451 | 1 | 449 | 0.0 | 866 |
| Msa0297630 | MtrunA17_Chr1g0180521 | 90.816 | 294 | 27 | 0 | 1 | 294 | 1 | 294 | 0.0 | 569 |
| Msa0297630 | MtrunA17_Chr1g0160941 | 30.970 | 268 | 165 | 8 | 11 | 264 | 4 | 265 | 2.00e-29 | 116 |
| Msa0297630 | MtrunA17_Chr8g0373091 | 29.368 | 269 | 168 | 7 | 11 | 264 | 4 | 265 | 8.07e-27 | 109 |
| Msa0297630 | MtrunA17_Chr1g0146281 | 26.259 | 278 | 186 | 6 | 17 | 278 | 28 | 302 | 2.80e-22 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297630 | AT3G60500.3 | 59.732 | 447 | 149 | 7 | 1 | 435 | 1 | 428 | 5.04e-178 | 505 |
| Msa0297630 | AT3G60500.2 | 59.732 | 447 | 149 | 7 | 1 | 435 | 1 | 428 | 5.04e-178 | 505 |
| Msa0297630 | AT3G60500.1 | 59.732 | 447 | 149 | 7 | 1 | 435 | 1 | 428 | 5.04e-178 | 505 |
| Msa0297630 | AT3G60500.4 | 65.301 | 366 | 109 | 3 | 1 | 361 | 1 | 353 | 4.01e-169 | 480 |
| Msa0297630 | AT3G12990.1 | 70.861 | 302 | 88 | 0 | 1 | 302 | 1 | 302 | 3.92e-159 | 452 |
| Msa0297630 | AT3G12990.3 | 70.861 | 302 | 88 | 0 | 1 | 302 | 1 | 302 | 3.92e-159 | 452 |
| Msa0297630 | AT3G12990.4 | 72.535 | 284 | 78 | 0 | 1 | 284 | 1 | 284 | 2.95e-151 | 431 |
| Msa0297630 | AT3G12990.2 | 75.234 | 214 | 53 | 0 | 1 | 214 | 1 | 214 | 1.77e-116 | 340 |
| Msa0297630 | AT3G07750.1 | 30.741 | 270 | 163 | 9 | 11 | 264 | 3 | 264 | 4.60e-28 | 113 |
| Msa0297630 | AT3G07750.2 | 30.741 | 270 | 163 | 9 | 11 | 264 | 3 | 264 | 4.60e-28 | 113 |
| Msa0297630 | AT1G60080.1 | 28.253 | 269 | 175 | 5 | 17 | 269 | 26 | 292 | 5.77e-24 | 102 |
Find 125 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAAGTTGAACATTAAATT+TGG | 0.095631 | 2_3:+51344756 | Msa0297630:CDS |
| CATAACTTAATTCCCATTAT+TGG | 0.197437 | 2_3:-51348491 | None:intergenic |
| TTCTTTCTGCCAAACTTGTC+TGG | 0.208475 | 2_3:+51345027 | Msa0297630:CDS |
| ATTTCCTGCGCTGGTTCTTC+TGG | 0.247600 | 2_3:-51348355 | None:intergenic |
| TCCTTTGAGCCTGGCCGTCC+TGG | 0.261790 | 2_3:+51344924 | Msa0297630:CDS |
| CTTCCAGTTGCAGTCACCTT+TGG | 0.284591 | 2_3:+51345433 | Msa0297630:CDS |
| CATTATAGACCGCGGTTTAC+GGG | 0.295153 | 2_3:+51344971 | Msa0297630:CDS |
| GTATATTTGTTTGTTCATTT+AGG | 0.315602 | 2_3:+51348609 | Msa0297630:three_prime_UTR |
| CAAAATTGACAAAGCATGTT+TGG | 0.315633 | 2_3:-51348730 | None:intergenic |
| GAAAGGCGAGACAAATTTAA+TGG | 0.327208 | 2_3:+51346346 | Msa0297630:CDS |
| GCATTATAGACCGCGGTTTA+CGG | 0.332870 | 2_3:+51344970 | Msa0297630:CDS |
| TTTGGATTAATCATTACTTT+TGG | 0.343972 | 2_3:-51348756 | None:intergenic |
| AATCCAAAGGTGACTGCAAC+TGG | 0.344185 | 2_3:-51345436 | None:intergenic |
| GAATGTGATGCCACATCATT+AGG | 0.345051 | 2_3:+51346368 | Msa0297630:CDS |
| GGAGAATCTGCCGTTGAGTT+AGG | 0.366917 | 2_3:+51344945 | Msa0297630:CDS |
| GCAAGTTGAACATTAAATTT+GGG | 0.368287 | 2_3:+51344757 | Msa0297630:CDS |
| AACCCTAAAACCTTTGTTGT+AGG | 0.372913 | 2_3:+51344099 | Msa0297630:five_prime_UTR |
| ATTAAATTTGGGAGGGATGA+TGG | 0.374567 | 2_3:+51344768 | Msa0297630:CDS |
| AGTGGATGGTCGGGGCCCCT+TGG | 0.390912 | 2_3:+51344728 | Msa0297630:CDS |
| TGTGGAACCACTGCCACGTT+AGG | 0.394002 | 2_3:+51346263 | Msa0297630:CDS |
| AGAAGGCCTGAATGCTCGTT+GGG | 0.394350 | 2_3:+51345246 | Msa0297630:CDS |
| TCTCGCCTTTCAGCTTCAAC+TGG | 0.394391 | 2_3:-51346334 | None:intergenic |
| TCATTAGGCCTATCTTTGTA+AGG | 0.401300 | 2_3:-51344855 | None:intergenic |
| ATAGATAGTGTACCTTCATT+AGG | 0.408385 | 2_3:-51344870 | None:intergenic |
| ACTCACTGCATCATTTATCT+TGG | 0.411650 | 2_3:-51345790 | None:intergenic |
| GCGAATGGCCCAGACAAGTT+TGG | 0.413491 | 2_3:-51345036 | None:intergenic |
| TCTTTCTGCCAAACTTGTCT+GGG | 0.424579 | 2_3:+51345028 | Msa0297630:CDS |
| CAGTCATTACAGCCTCTTCA+TGG | 0.425419 | 2_3:-51345635 | None:intergenic |
| TTGTGCAGCCTTACAAAGAT+AGG | 0.432049 | 2_3:+51344847 | Msa0297630:CDS |
| TCTTAGAAAATGCGATAGAC+TGG | 0.437829 | 2_3:+51348551 | Msa0297630:three_prime_UTR |
| GCTGATCCTTCCTTTGAGCC+TGG | 0.439737 | 2_3:+51344915 | Msa0297630:CDS |
| CATGAAGAGGCTGTAATGAC+TGG | 0.448208 | 2_3:+51345636 | Msa0297630:CDS |
| ATTGACACTGCTCTAACTGC+TGG | 0.450510 | 2_3:+51348397 | Msa0297630:CDS |
| TGACACGTGTCTCGCCCAAT+TGG | 0.455639 | 2_3:-51344803 | None:intergenic |
| AGCAGAGATTAGCTAATTGT+TGG | 0.456222 | 2_3:+51344649 | Msa0297630:CDS |
| CGGTGGCCCTCAAGCTGGTA+AGG | 0.458046 | 2_3:+51346436 | Msa0297630:CDS |
| GCAGTTAGAGCAGTGTCAAT+TGG | 0.458988 | 2_3:-51348394 | None:intergenic |
| AGAGCTTCGAGTGGATGGTC+GGG | 0.470323 | 2_3:+51344719 | Msa0297630:CDS |
| CCAACTGCTTCCTACAACAA+AGG | 0.470812 | 2_3:-51344109 | None:intergenic |
| ATCAACTTCTAGTAAACAAA+AGG | 0.472420 | 2_3:+51348312 | Msa0297630:CDS |
| TGGGTCTGCCGAGATCCAAT+TGG | 0.473726 | 2_3:+51344788 | Msa0297630:CDS |
| TGTTTCTGCTTCCGACGAAA+AGG | 0.475324 | 2_3:-51344139 | None:intergenic |
| GTGGAACCACTGCCACGTTA+GGG | 0.484142 | 2_3:+51346264 | Msa0297630:CDS |
| GCAGATTCTCCAGGACGGCC+AGG | 0.492915 | 2_3:-51344933 | None:intergenic |
| TGCTGCAAATATTGCTGCAT+TGG | 0.500659 | 2_3:+51345206 | Msa0297630:CDS |
| GGGTCTGCCGAGATCCAATT+GGG | 0.507284 | 2_3:+51344789 | Msa0297630:CDS |
| TTAAATTTGGGAGGGATGAT+GGG | 0.508701 | 2_3:+51344769 | Msa0297630:CDS |
| GGAAGATGATGTATAATCAA+AGG | 0.510424 | 2_3:-51345415 | None:intergenic |
| TTGAAAAGCACAACAATGAA+AGG | 0.511669 | 2_3:+51346192 | Msa0297630:CDS |
| AGAGATTAGCTAATTGTTGG+CGG | 0.512799 | 2_3:+51344652 | Msa0297630:CDS |
| AACTCAACGGCAGATTCTCC+AGG | 0.512885 | 2_3:-51344942 | None:intergenic |
| GTGTGTGCAATTCAAAAGCC+TGG | 0.513608 | 2_3:+51345693 | Msa0297630:CDS |
| CAGAGCTTCGAGTGGATGGT+CGG | 0.514274 | 2_3:+51344718 | Msa0297630:CDS |
| GAAGATGATGTATAATCAAA+GGG | 0.519406 | 2_3:-51345414 | None:intergenic |
| ACGACATTCTTCCTCTGTTG+CGG | 0.519551 | 2_3:+51346232 | Msa0297630:CDS |
| ACTGTCTTGATTTCCTGCGC+TGG | 0.521832 | 2_3:-51348364 | None:intergenic |
| CTATCAGAGCTTCGAGTGGA+TGG | 0.523011 | 2_3:+51344714 | Msa0297630:CDS |
| TCCAGGACGGCCAGGCTCAA+AGG | 0.523314 | 2_3:-51344925 | None:intergenic |
| AAACTTGCTCATGTTAAAGC+TGG | 0.525982 | 2_3:+51345756 | Msa0297630:CDS |
| GCAGAGCGATTCAGTGTCAA+TGG | 0.527593 | 2_3:-51345003 | None:intergenic |
| TGAATTGACACAATCTGAGT+AGG | 0.528375 | 2_3:-51346732 | None:intergenic |
| TTTATCGGTGGCCCTCAAGC+TGG | 0.530832 | 2_3:+51346431 | Msa0297630:CDS |
| ACTGCAACACTTAATGCAAA+TGG | 0.537645 | 2_3:+51345666 | Msa0297630:CDS |
| CTTCACTGAATTCTCTCCCA+TGG | 0.539169 | 2_3:+51344893 | Msa0297630:CDS |
| ACATTCTTCCTCTGTTGCGG+TGG | 0.540050 | 2_3:+51346235 | Msa0297630:CDS |
| CTGACACCTTACCAGCTTGA+GGG | 0.540090 | 2_3:-51346442 | None:intergenic |
| GTTCAACTTGCGATAGTCCA+AGG | 0.542934 | 2_3:-51344745 | None:intergenic |
| TGGAACCACTGCCACGTTAG+GGG | 0.547405 | 2_3:+51346265 | Msa0297630:CDS |
| TAAACAAAAGGATTCAAGAC+AGG | 0.550828 | 2_3:+51348324 | Msa0297630:CDS |
| GAGCTTCGAGTGGATGGTCG+GGG | 0.552607 | 2_3:+51344720 | Msa0297630:CDS |
| CAGAAGGCCTGAATGCTCGT+TGG | 0.553951 | 2_3:+51345245 | Msa0297630:CDS |
| TTTCAGCAATGAAAATCTTG+TGG | 0.555730 | 2_3:+51345459 | Msa0297630:CDS |
| TCTGTTGCGGTGGATGTATG+TGG | 0.557391 | 2_3:+51346245 | Msa0297630:CDS |
| TGAAAAGCACAACAATGAAA+GGG | 0.559466 | 2_3:+51346193 | Msa0297630:CDS |
| ACTGCTGGGCAGAGTAATGA+AGG | 0.560209 | 2_3:+51348412 | Msa0297630:CDS |
| GTTGAACATTAAATTTGGGA+GGG | 0.560586 | 2_3:+51344761 | Msa0297630:CDS |
| CCTTTGTTGTAGGAAGCAGT+TGG | 0.564103 | 2_3:+51344109 | Msa0297630:five_prime_UTR |
| CAATCAGATGGTGATAAAGA+AGG | 0.565707 | 2_3:+51346299 | Msa0297630:CDS |
| TACAAAGATAGGCCTAATGA+AGG | 0.565777 | 2_3:+51344858 | Msa0297630:CDS |
| ACCCTGCATTGTCTAGTATG+TGG | 0.565903 | 2_3:-51345067 | None:intergenic |
| CTAGACCAGTTGAAGCTGAA+AGG | 0.569023 | 2_3:+51346329 | Msa0297630:CDS |
| TGTGTGCAATTCAAAAGCCT+GGG | 0.572264 | 2_3:+51345694 | Msa0297630:CDS |
| CTGTCAAGCCCAAGAACAAG+AGG | 0.572717 | 2_3:+51348452 | Msa0297630:CDS |
| AGTTGAACATTAAATTTGGG+AGG | 0.574931 | 2_3:+51344760 | Msa0297630:CDS |
| TTCAACTTGCGATAGTCCAA+GGG | 0.575404 | 2_3:-51344744 | None:intergenic |
| CTCAAAGGAAGGATCAGCCA+TGG | 0.576940 | 2_3:-51344910 | None:intergenic |
| CTTAGAAAATGCGATAGACT+GGG | 0.580888 | 2_3:+51348552 | Msa0297630:three_prime_UTR |
| TAAGCCAGAAGAACCAGCGC+AGG | 0.581328 | 2_3:+51348351 | Msa0297630:CDS |
| AAGGCCTGAATGCTCGTTGG+GGG | 0.582507 | 2_3:+51345248 | Msa0297630:CDS |
| GTGCAGAGTAGCAAGAAGGA+TGG | 0.583283 | 2_3:+51346395 | Msa0297630:CDS |
| GAATTGACACAATCTGAGTA+GGG | 0.583687 | 2_3:-51346731 | None:intergenic |
| GGAAAACAAAATCAATCAGA+TGG | 0.587328 | 2_3:+51346287 | Msa0297630:CDS |
| ACTGACACCTTACCAGCTTG+AGG | 0.591782 | 2_3:-51346443 | None:intergenic |
| TGTCTCGCCCAATTGGATCT+CGG | 0.592757 | 2_3:-51344796 | None:intergenic |
| TGATGTATAATCAAAGGGAG+TGG | 0.594545 | 2_3:-51345409 | None:intergenic |
| GGAACCACTGCCACGTTAGG+GGG | 0.597428 | 2_3:+51346266 | Msa0297630:CDS |
| GGACGGCCAGGCTCAAAGGA+AGG | 0.597532 | 2_3:-51344921 | None:intergenic |
| CTGAGGAAGCTGACCTCAGG+AGG | 0.600233 | 2_3:-51345300 | None:intergenic |
| TTGACACTGCTCTAACTGCT+GGG | 0.600516 | 2_3:+51348398 | Msa0297630:CDS |
| TAATGAAGGTAAGACTCTGA+AGG | 0.603765 | 2_3:+51348426 | Msa0297630:CDS |
| GAAGGCCTGAATGCTCGTTG+GGG | 0.609514 | 2_3:+51345247 | Msa0297630:CDS |
| ATCCACATACTAGACAATGC+AGG | 0.610994 | 2_3:+51345065 | Msa0297630:CDS |
| ACAAGTGCAGAGTAGCAAGA+AGG | 0.616848 | 2_3:+51346391 | Msa0297630:CDS |
| CATCTCTGAAGACATTCAGA+AGG | 0.617687 | 2_3:+51345229 | Msa0297630:CDS |
| ACAGCCTCTTCATGGTATGT+CGG | 0.618076 | 2_3:-51345627 | None:intergenic |
| CTGCACTTGTCCTAATGATG+TGG | 0.618547 | 2_3:-51346378 | None:intergenic |
| TCAAAGGAAGGATCAGCCAT+GGG | 0.631822 | 2_3:-51344909 | None:intergenic |
| ATGAAGAGGCTGTAATGACT+GGG | 0.631891 | 2_3:+51345637 | Msa0297630:CDS |
| AGGCCTGAATGCTCGTTGGG+GGG | 0.639267 | 2_3:+51345249 | Msa0297630:CDS |
| TCCACATACTAGACAATGCA+GGG | 0.639330 | 2_3:+51345066 | Msa0297630:CDS |
| AGTTGTAGTGCATCCTCCTG+AGG | 0.641826 | 2_3:+51345287 | Msa0297630:CDS |
| AAAGCTTCTCTAGCTTCTCG+TGG | 0.641908 | 2_3:+51346764 | Msa0297630:CDS |
| TATAATGCGTCCTAACTCAA+CGG | 0.642138 | 2_3:-51344955 | None:intergenic |
| GGATCCGACATACCATGAAG+AGG | 0.653779 | 2_3:+51345623 | Msa0297630:CDS |
| CTCTACTTTCCCGTAAACCG+CGG | 0.664238 | 2_3:-51344980 | None:intergenic |
| TCTTCTATCAGAGCTTCGAG+TGG | 0.667601 | 2_3:+51344710 | Msa0297630:CDS |
| TCTAAGATAAGATACATGGT+CGG | 0.675153 | 2_3:-51348535 | None:intergenic |
| TATGTGGATGTCAATGCGAA+TGG | 0.686074 | 2_3:-51345051 | None:intergenic |
| GTGCAATTCAAAAGCCTGGG+GGG | 0.686221 | 2_3:+51345697 | Msa0297630:CDS |
| CAACGGCAGATTCTCCAGGA+CGG | 0.698913 | 2_3:-51344938 | None:intergenic |
| ACATACATCCACCGCAACAG+AGG | 0.701182 | 2_3:-51346243 | None:intergenic |
| GTGTGCAATTCAAAAGCCTG+GGG | 0.708877 | 2_3:+51345695 | Msa0297630:CDS |
| TCAACTTGCGATAGTCCAAG+GGG | 0.732414 | 2_3:-51344743 | None:intergenic |
| TTAGGACGCATTATAGACCG+CGG | 0.761510 | 2_3:+51344963 | Msa0297630:CDS |
| TGTGCAATTCAAAAGCCTGG+GGG | 0.776295 | 2_3:+51345696 | Msa0297630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAAAATTTTCTTATAAAT+AGG | - | chr2_3:51347356-51347375 | None:intergenic | 10.0% |
| !! | TAAAAAATAATAATTTACAG+GGG | - | chr2_3:51347646-51347665 | None:intergenic | 10.0% |
| !!! | TTCATATATTTTATAATCAT+TGG | + | chr2_3:51348184-51348203 | Msa0297630:intron | 10.0% |
| !!! | CCTCTTTAATTTTATTTTTT+CGG | + | chr2_3:51344412-51344431 | Msa0297630:intron | 15.0% |
| !! | TTTAGATAAAATTGTTCAAT+TGG | + | chr2_3:51346937-51346956 | Msa0297630:intron | 15.0% |
| !! | AATTCTTTCTATAATAACTA+AGG | + | chr2_3:51347168-51347187 | Msa0297630:intron | 15.0% |
| !! | ATTCTTTCTATAATAACTAA+GGG | + | chr2_3:51347169-51347188 | Msa0297630:intron | 15.0% |
| !! | GTAATTTAACAAAACAATAA+GGG | + | chr2_3:51347289-51347308 | Msa0297630:intron | 15.0% |
| !! | AAAACAAAAAAAATTTACAG+GGG | - | chr2_3:51347674-51347693 | None:intergenic | 15.0% |
| !! | CAAAACAAAAAAAATTTACA+GGG | - | chr2_3:51347675-51347694 | None:intergenic | 15.0% |
| !!! | CAAAACAATTTTTTTTTACA+GGG | + | chr2_3:51347780-51347799 | Msa0297630:intron | 15.0% |
| !!! | AAAACAATTTTTTTTTACAG+GGG | + | chr2_3:51347781-51347800 | Msa0297630:intron | 15.0% |
| !! | TAAAAAAAAAAAGTTTACAG+AGG | + | chr2_3:51347807-51347826 | Msa0297630:intron | 15.0% |
| !! | AAAAAAAAAAAGTTTACAGA+GGG | + | chr2_3:51347808-51347827 | Msa0297630:intron | 15.0% |
| !!! | TTTAGTCAAAAAATAGATTT+TGG | - | chr2_3:51348639-51348658 | None:intergenic | 15.0% |
| !!! | AAAATCTATTTTTTGACTAA+AGG | + | chr2_3:51348638-51348657 | Msa0297630:three_prime_UTR | 15.0% |
| !!! | GTTTTAATTGTGGTAAATTA+GGG | - | chr2_3:51344082-51344101 | None:intergenic | 20.0% |
| !!! | TATTGATAACAGTTTAGATT+TGG | + | chr2_3:51344297-51344316 | Msa0297630:intron | 20.0% |
| !! | CCGAAAAAATAAAATTAAAG+AGG | - | chr2_3:51344415-51344434 | None:intergenic | 20.0% |
| !! | TAGTTTCTGATAAAATGATA+TGG | + | chr2_3:51344495-51344514 | Msa0297630:intron | 20.0% |
| !! | ATATATACCAAAATCAAGAA+AGG | - | chr2_3:51345558-51345577 | None:intergenic | 20.0% |
| !!! | AAGCATGAAAATTTTCATAA+CGG | - | chr2_3:51346079-51346098 | None:intergenic | 20.0% |
| !!! | AATCAAAAGTTATTAGTTCT+TGG | - | chr2_3:51346472-51346491 | None:intergenic | 20.0% |
| !!! | ATTACTTTTATCTGTCATTT+TGG | + | chr2_3:51346644-51346663 | Msa0297630:intron | 20.0% |
| !!! | TTTTGATTAAGCATTTAAAC+TGG | + | chr2_3:51346834-51346853 | Msa0297630:intron | 20.0% |
| !!! | GATTTCAATTTTTGGAATTT+TGG | - | chr2_3:51346891-51346910 | None:intergenic | 20.0% |
| !!! | ATTTTATCTAAACAAATGAG+AGG | - | chr2_3:51346929-51346948 | None:intergenic | 20.0% |
| !! | TCTTAAAATGACAACTAAAA+GGG | - | chr2_3:51347059-51347078 | None:intergenic | 20.0% |
| !! | GTTATTATAGAAAGAATTGA+TGG | - | chr2_3:51347166-51347185 | None:intergenic | 20.0% |
| !!! | ATAACTAAGGGTAATTTTTT+TGG | + | chr2_3:51347181-51347200 | Msa0297630:intron | 20.0% |
| !! | GGTAATTTAACAAAACAATA+AGG | + | chr2_3:51347288-51347307 | Msa0297630:intron | 20.0% |
| !!! | AATTTTCTTATAAATAGGAC+CGG | - | chr2_3:51347351-51347370 | None:intergenic | 20.0% |
| !!! | TCTTTTCTTATATAAAAGAC+CGG | + | chr2_3:51347589-51347608 | Msa0297630:intron | 20.0% |
| !! | AAACAAAAAAAATTTACAGG+GGG | - | chr2_3:51347673-51347692 | None:intergenic | 20.0% |
| !! | CCAAAACAAAAAAAATTTAC+AGG | - | chr2_3:51347676-51347695 | None:intergenic | 20.0% |
| !!! | CCTGTAAATTTTTTTTGTTT+TGG | + | chr2_3:51347673-51347692 | Msa0297630:intron | 20.0% |
| !! | TTTCTGCAAAAAAAAAAAGT+TGG | + | chr2_3:51347729-51347748 | Msa0297630:intron | 20.0% |
| !!! | CCTGTAAAAAAAAATTGTTT+TGG | - | chr2_3:51347782-51347801 | None:intergenic | 20.0% |
| !!! | CCAAAACAATTTTTTTTTAC+AGG | + | chr2_3:51347779-51347798 | Msa0297630:intron | 20.0% |
| !! | AAAAAAAAAAGTTTACAGAG+GGG | + | chr2_3:51347809-51347828 | Msa0297630:intron | 20.0% |
| !! | TGCAACATTAATTATTGTTT+GGG | - | chr2_3:51347878-51347897 | None:intergenic | 20.0% |
| !! | ATGCAACATTAATTATTGTT+TGG | - | chr2_3:51347879-51347898 | None:intergenic | 20.0% |
| !! | AAAAAAACATCTTCCAATAA+TGG | + | chr2_3:51348478-51348497 | Msa0297630:CDS | 20.0% |
| !! | AAAAAACATCTTCCAATAAT+GGG | + | chr2_3:51348479-51348498 | Msa0297630:CDS | 20.0% |
| !!! | ATTTTCTAAGATAAGATACA+TGG | - | chr2_3:51348542-51348561 | None:intergenic | 20.0% |
| !! | GTATATTTGTTTGTTCATTT+AGG | + | chr2_3:51348609-51348628 | Msa0297630:three_prime_UTR | 20.0% |
| !!! | TTTGGATTAATCATTACTTT+TGG | - | chr2_3:51348759-51348778 | None:intergenic | 20.0% |
| !!! | GGTTTTAATTGTGGTAAATT+AGG | - | chr2_3:51344083-51344102 | None:intergenic | 25.0% |
| !!! | CTCTTCTTTATTTAACTTGT+CGG | + | chr2_3:51344188-51344207 | Msa0297630:intron | 25.0% |
| !! | ATTACAGCTATATTGTTTTC+CGG | + | chr2_3:51344226-51344245 | Msa0297630:intron | 25.0% |
| !!! | ATTCCATTCAGTTTTGAATT+TGG | + | chr2_3:51344251-51344270 | Msa0297630:intron | 25.0% |
| !!! | TTCCATTCAGTTTTGAATTT+GGG | + | chr2_3:51344252-51344271 | Msa0297630:intron | 25.0% |
| ! | TTAAAGAGGAATTAACATCT+GGG | - | chr2_3:51344401-51344420 | None:intergenic | 25.0% |
| ! | ATTAAAGAGGAATTAACATC+TGG | - | chr2_3:51344402-51344421 | None:intergenic | 25.0% |
| !! | GCAAGTTGAACATTAAATTT+GGG | + | chr2_3:51344757-51344776 | Msa0297630:CDS | 25.0% |
| ! | GATAAACAAATCAGTAAGTT+GGG | - | chr2_3:51345131-51345150 | None:intergenic | 25.0% |
| ! | AGATAAACAAATCAGTAAGT+TGG | - | chr2_3:51345132-51345151 | None:intergenic | 25.0% |
| !! | GATTTGTTTATCTACAACTA+AGG | + | chr2_3:51345139-51345158 | Msa0297630:intron | 25.0% |
| ! | GATAATATGATATGTATTGC+AGG | + | chr2_3:51345378-51345397 | Msa0297630:intron | 25.0% |
| ! | GAAGATGATGTATAATCAAA+GGG | - | chr2_3:51345417-51345436 | None:intergenic | 25.0% |
| !!! | TTGATTTTGGTATATATACG+AGG | + | chr2_3:51345561-51345580 | Msa0297630:intron | 25.0% |
| !! | TTTTTATGCGTAAAGATTTG+AGG | + | chr2_3:51345818-51345837 | Msa0297630:intron | 25.0% |
| ! | GATTATGGAATGTATATTGT+TGG | + | chr2_3:51346137-51346156 | Msa0297630:intron | 25.0% |
| !!! | AATTTCTTTTGTTGTCTGAA+TGG | + | chr2_3:51346162-51346181 | Msa0297630:intron | 25.0% |
| ! | CTATAAATAACAGTCTTTGA+GGG | - | chr2_3:51346538-51346557 | None:intergenic | 25.0% |
| ! | ACTATAAATAACAGTCTTTG+AGG | - | chr2_3:51346539-51346558 | None:intergenic | 25.0% |
| !! | AGACTGTTATTTATAGTCAA+TGG | + | chr2_3:51346542-51346561 | Msa0297630:intron | 25.0% |
| !!! | TAGTCAATGGATTGATAATA+TGG | + | chr2_3:51346555-51346574 | Msa0297630:intron | 25.0% |
| ! | TGATAATATGGAAACCTATA+TGG | + | chr2_3:51346567-51346586 | Msa0297630:intron | 25.0% |
| ! | TATGTTGAGGTAAAAATACT+TGG | + | chr2_3:51346689-51346708 | Msa0297630:intron | 25.0% |
| !! | ACTGCAATGATTTCAATTTT+TGG | - | chr2_3:51346899-51346918 | None:intergenic | 25.0% |
| ! | GTCTTAAAATGACAACTAAA+AGG | - | chr2_3:51347060-51347079 | None:intergenic | 25.0% |
| !!! | TAAATGAGTAAAGGTACTAT+AGG | - | chr2_3:51347133-51347152 | None:intergenic | 25.0% |
| ! | ATGGGATAATAAATGAGTAA+AGG | - | chr2_3:51347142-51347161 | None:intergenic | 25.0% |
| ! | ATAGAAAGAATTGATGGAAT+GGG | - | chr2_3:51347160-51347179 | None:intergenic | 25.0% |
| ! | TATAGAAAGAATTGATGGAA+TGG | - | chr2_3:51347161-51347180 | None:intergenic | 25.0% |
| ! | AACAAAACAATAAGGGTTAA+TGG | + | chr2_3:51347296-51347315 | Msa0297630:intron | 25.0% |
| ! | TGTGACTCTTTCTTATAAAT+AGG | - | chr2_3:51347392-51347411 | None:intergenic | 25.0% |
| ! | AAAAGACCAACATTAAATGA+GGG | - | chr2_3:51347454-51347473 | None:intergenic | 25.0% |
| !!! | AATGTTGGTCTTTTCAATAT+TGG | + | chr2_3:51347460-51347479 | Msa0297630:intron | 25.0% |
| !!! | ATACTTCACAAATTTTGATG+AGG | + | chr2_3:51347498-51347517 | Msa0297630:intron | 25.0% |
| !!! | TACTTCACAAATTTTGATGA+GGG | + | chr2_3:51347499-51347518 | Msa0297630:intron | 25.0% |
| !! | ATTTTTGAATGACCTATTAG+GGG | - | chr2_3:51347704-51347723 | None:intergenic | 25.0% |
| !! | CATTTTTGAATGACCTATTA+GGG | - | chr2_3:51347705-51347724 | None:intergenic | 25.0% |
| !!! | TCATTTTTGAATGACCTATT+AGG | - | chr2_3:51347706-51347725 | None:intergenic | 25.0% |
| ! | ATCAACTTCTAGTAAACAAA+AGG | + | chr2_3:51348312-51348331 | Msa0297630:CDS | 25.0% |
| ! | CATAACTTAATTCCCATTAT+TGG | - | chr2_3:51348494-51348513 | None:intergenic | 25.0% |
| !!! | TCTATTTTTTGACTAAAGGA+AGG | + | chr2_3:51348642-51348661 | Msa0297630:three_prime_UTR | 25.0% |
| !!! | CTATTTTTTGACTAAAGGAA+GGG | + | chr2_3:51348643-51348662 | Msa0297630:three_prime_UTR | 25.0% |
| !!! | AGGTTTTAGGGTTTTAATTG+TGG | - | chr2_3:51344092-51344111 | None:intergenic | 30.0% |
| ! | TTCCTACAACAAAGGTTTTA+GGG | - | chr2_3:51344104-51344123 | None:intergenic | 30.0% |
| ATCCCAAATTCAAAACTGAA+TGG | - | chr2_3:51344257-51344276 | None:intergenic | 30.0% | |
| AATACACGCATTTGTACAAA+AGG | - | chr2_3:51344281-51344300 | None:intergenic | 30.0% | |
| TGATAACAGTTTAGATTTGG+AGG | + | chr2_3:51344300-51344319 | Msa0297630:intron | 30.0% | |
| GATAACAGTTTAGATTTGGA+GGG | + | chr2_3:51344301-51344320 | Msa0297630:intron | 30.0% | |
| ! | CGCAAGTTGAACATTAAATT+TGG | + | chr2_3:51344756-51344775 | Msa0297630:CDS | 30.0% |
| AGTTGAACATTAAATTTGGG+AGG | + | chr2_3:51344760-51344779 | Msa0297630:CDS | 30.0% | |
| GTTGAACATTAAATTTGGGA+GGG | + | chr2_3:51344761-51344780 | Msa0297630:CDS | 30.0% | |
| ATAGATAGTGTACCTTCATT+AGG | - | chr2_3:51344873-51344892 | None:intergenic | 30.0% | |
| GGAAGATGATGTATAATCAA+AGG | - | chr2_3:51345418-51345437 | None:intergenic | 30.0% | |
| TTCATTGCTGAAAAATCCAA+AGG | - | chr2_3:51345452-51345471 | None:intergenic | 30.0% | |
| TTTCAGCAATGAAAATCTTG+TGG | + | chr2_3:51345459-51345478 | Msa0297630:CDS | 30.0% | |
| ! | ATACAAGCCTTTCTTGATTT+TGG | + | chr2_3:51345548-51345567 | Msa0297630:intron | 30.0% |
| TTGGTATATATACGAGGTAA+TGG | + | chr2_3:51345567-51345586 | Msa0297630:intron | 30.0% | |
| ! | GATTTTATATGATGCTCTCT+AGG | + | chr2_3:51345596-51345615 | Msa0297630:intron | 30.0% |
| CTTAACACCAAACACAAAAT+GGG | - | chr2_3:51345898-51345917 | None:intergenic | 30.0% | |
| ATTGCATTATCAATTGCGTA+TGG | + | chr2_3:51346115-51346134 | Msa0297630:intron | 30.0% | |
| ! | TATCAATTGCGTATGGATTA+TGG | + | chr2_3:51346122-51346141 | Msa0297630:intron | 30.0% |
| ! | TTGAAAAGCACAACAATGAA+AGG | + | chr2_3:51346192-51346211 | Msa0297630:CDS | 30.0% |
| ! | TGAAAAGCACAACAATGAAA+GGG | + | chr2_3:51346193-51346212 | Msa0297630:CDS | 30.0% |
| GGAAAACAAAATCAATCAGA+TGG | + | chr2_3:51346287-51346306 | Msa0297630:CDS | 30.0% | |
| ! | GGAAGCTCAAAGAATTTTAT+CGG | + | chr2_3:51346416-51346435 | Msa0297630:CDS | 30.0% |
| TTGACATGTTTATGCCATAT+AGG | - | chr2_3:51346584-51346603 | None:intergenic | 30.0% | |
| AACATAGACAAAACTCAGAA+TGG | - | chr2_3:51346675-51346694 | None:intergenic | 30.0% | |
| CAAGATTATAGAGAAAGTGA+AGG | - | chr2_3:51346801-51346820 | None:intergenic | 30.0% | |
| CTTCACTTTCTCTATAATCT+TGG | + | chr2_3:51346799-51346818 | Msa0297630:intron | 30.0% | |
| TTGAAATCATTGCAGTACTA+AGG | + | chr2_3:51346903-51346922 | Msa0297630:intron | 30.0% | |
| GAATGTCTTCTAAACAGAAT+GGG | - | chr2_3:51346984-51347003 | None:intergenic | 30.0% | |
| TGAATGTCTTCTAAACAGAA+TGG | - | chr2_3:51346985-51347004 | None:intergenic | 30.0% | |
| AAATGACAACTAAAAGGGAA+CGG | - | chr2_3:51347054-51347073 | None:intergenic | 30.0% | |
| !!! | ACTAAGGGTAATTTTTTTGG+TGG | + | chr2_3:51347184-51347203 | Msa0297630:intron | 30.0% |
| GACAATGCATAATATATGCA+AGG | - | chr2_3:51347232-51347251 | None:intergenic | 30.0% | |
| TTCTAACCCTCATTTAATGT+TGG | + | chr2_3:51347445-51347464 | Msa0297630:intron | 30.0% | |
| GAAAAGACCAACATTAAATG+AGG | - | chr2_3:51347455-51347474 | None:intergenic | 30.0% | |
| !! | TTGGTCTTTTCAATATTGGT+GGG | + | chr2_3:51347464-51347483 | Msa0297630:intron | 30.0% |
| !!! | GTCTTGGTTTTGATGATTTT+TGG | + | chr2_3:51347565-51347584 | Msa0297630:intron | 30.0% |
| TTTCTTATATAAAAGACCGG+AGG | + | chr2_3:51347592-51347611 | Msa0297630:intron | 30.0% | |
| TTCTTATATAAAAGACCGGA+GGG | + | chr2_3:51347593-51347612 | Msa0297630:intron | 30.0% | |
| TAATAATTTACAGGGGAAAC+CGG | - | chr2_3:51347639-51347658 | None:intergenic | 30.0% | |
| ! | TTTTTGAATGACCTATTAGG+GGG | - | chr2_3:51347752-51347771 | None:intergenic | 30.0% |
| ! | TGGTTTTTGAATGACCTATT+AGG | + | chr2_3:51347749-51347768 | Msa0297630:intron | 30.0% |
| ! | GGTTTTTGAATGACCTATTA+GGG | + | chr2_3:51347750-51347769 | Msa0297630:intron | 30.0% |
| ! | GTTTTTGAATGACCTATTAG+GGG | + | chr2_3:51347751-51347770 | Msa0297630:intron | 30.0% |
| ! | TTTTTGAATGACCTATTAGG+GGG | + | chr2_3:51347752-51347771 | Msa0297630:intron | 30.0% |
| TCTGTAATATAGGTCATTTC+CGG | - | chr2_3:51347838-51347857 | None:intergenic | 30.0% | |
| GAAATGACCTATATTACAGA+GGG | + | chr2_3:51347838-51347857 | Msa0297630:intron | 30.0% | |
| TTCAAATGCGATAACGAAAA+AGG | + | chr2_3:51347950-51347969 | Msa0297630:intron | 30.0% | |
| GATAACGAAAAAGGAACAAA+GGG | + | chr2_3:51347959-51347978 | Msa0297630:intron | 30.0% | |
| TTTATGGCTGTGAAAAGTAA+TGG | - | chr2_3:51348014-51348033 | None:intergenic | 30.0% | |
| !! | ATGAATCAGGTTGAGATTTA+TGG | - | chr2_3:51348030-51348049 | None:intergenic | 30.0% |
| ACCTGATTCATTATTCTACA+AGG | + | chr2_3:51348039-51348058 | Msa0297630:intron | 30.0% | |
| TCCTTGTAGAATAATGAATC+AGG | - | chr2_3:51348043-51348062 | None:intergenic | 30.0% | |
| TGTACTATTGTAAAATGAGC+AGG | + | chr2_3:51348286-51348305 | Msa0297630:intron | 30.0% | |
| TAAACAAAAGGATTCAAGAC+AGG | + | chr2_3:51348324-51348343 | Msa0297630:CDS | 30.0% | |
| ! | TTTTTCTTCCTCTTGTTCTT+GGG | - | chr2_3:51348463-51348482 | None:intergenic | 30.0% |
| !!! | TTTTTTCTTCCTCTTGTTCT+TGG | - | chr2_3:51348464-51348483 | None:intergenic | 30.0% |
| ! | TCTAAGATAAGATACATGGT+CGG | - | chr2_3:51348538-51348557 | None:intergenic | 30.0% |
| CAAAATTGACAAAGCATGTT+TGG | - | chr2_3:51348733-51348752 | None:intergenic | 30.0% | |
| ! | AACCCTAAAACCTTTGTTGT+AGG | + | chr2_3:51344099-51344118 | Msa0297630:five_prime_UTR | 35.0% |
| ! | CTTCCTACAACAAAGGTTTT+AGG | - | chr2_3:51344105-51344124 | None:intergenic | 35.0% |
| TCAAAACTGAATGGAATCAC+CGG | - | chr2_3:51344248-51344267 | None:intergenic | 35.0% | |
| ! | AGCAGAGATTAGCTAATTGT+TGG | + | chr2_3:51344649-51344668 | Msa0297630:CDS | 35.0% |
| ! | AGAGATTAGCTAATTGTTGG+CGG | + | chr2_3:51344652-51344671 | Msa0297630:CDS | 35.0% |
| ATTAAATTTGGGAGGGATGA+TGG | + | chr2_3:51344768-51344787 | Msa0297630:CDS | 35.0% | |
| TTAAATTTGGGAGGGATGAT+GGG | + | chr2_3:51344769-51344788 | Msa0297630:CDS | 35.0% | |
| TCATTAGGCCTATCTTTGTA+AGG | - | chr2_3:51344858-51344877 | None:intergenic | 35.0% | |
| TACAAAGATAGGCCTAATGA+AGG | + | chr2_3:51344858-51344877 | Msa0297630:CDS | 35.0% | |
| TATAATGCGTCCTAACTCAA+CGG | - | chr2_3:51344958-51344977 | None:intergenic | 35.0% | |
| GGAAGCTAAATAGAAAACAG+GGG | - | chr2_3:51345346-51345365 | None:intergenic | 35.0% | |
| CGGAAGCTAAATAGAAAACA+GGG | - | chr2_3:51345347-51345366 | None:intergenic | 35.0% | |
| CATATTATCGATAACTGCTG+CGG | - | chr2_3:51345367-51345386 | None:intergenic | 35.0% | |
| TGATGTATAATCAAAGGGAG+TGG | - | chr2_3:51345412-51345431 | None:intergenic | 35.0% | |
| ATATGATGCTCTCTAGGTAT+TGG | + | chr2_3:51345602-51345621 | Msa0297630:intron | 35.0% | |
| ACTGCAACACTTAATGCAAA+TGG | + | chr2_3:51345666-51345685 | Msa0297630:CDS | 35.0% | |
| ! | AAACTTGCTCATGTTAAAGC+TGG | + | chr2_3:51345756-51345775 | Msa0297630:CDS | 35.0% |
| ACTCACTGCATCATTTATCT+TGG | - | chr2_3:51345793-51345812 | None:intergenic | 35.0% | |
| ! | ATCATCTCCCATTTTGTGTT+TGG | + | chr2_3:51345888-51345907 | Msa0297630:intron | 35.0% |
| GCTTAACACCAAACACAAAA+TGG | - | chr2_3:51345899-51345918 | None:intergenic | 35.0% | |
| TCTTCTGCTTATAAGTCTTC+TGG | + | chr2_3:51345954-51345973 | Msa0297630:intron | 35.0% | |
| ! | TTTGTTGTCTGAATGGATGT+AGG | + | chr2_3:51346169-51346188 | Msa0297630:intron | 35.0% |
| CAATCAGATGGTGATAAAGA+AGG | + | chr2_3:51346299-51346318 | Msa0297630:CDS | 35.0% | |
| GAAAGGCGAGACAAATTTAA+TGG | + | chr2_3:51346346-51346365 | Msa0297630:CDS | 35.0% | |
| ! | AGCTCAAAGAATTTTATCGG+TGG | + | chr2_3:51346419-51346438 | Msa0297630:CDS | 35.0% |
| ! | TTTGATAGTCTAGCTGTTTC+TGG | + | chr2_3:51346511-51346530 | Msa0297630:intron | 35.0% |
| !! | TCTGAGTTTTGTCTATGTTG+AGG | + | chr2_3:51346676-51346695 | Msa0297630:intron | 35.0% |
| GAATTGACACAATCTGAGTA+GGG | - | chr2_3:51346734-51346753 | None:intergenic | 35.0% | |
| TGAATTGACACAATCTGAGT+AGG | - | chr2_3:51346735-51346754 | None:intergenic | 35.0% | |
| !!! | GAGGGAGTATTGTTTTACAT+GGG | - | chr2_3:51347032-51347051 | None:intergenic | 35.0% |
| !!! | GTAATTTTTTTGGTGGTGTC+CGG | + | chr2_3:51347191-51347210 | Msa0297630:intron | 35.0% |
| !!! | TAATTTTTTTGGTGGTGTCC+GGG | + | chr2_3:51347192-51347211 | Msa0297630:intron | 35.0% |
| TGCATAATATATGCAAGGTC+CGG | - | chr2_3:51347227-51347246 | None:intergenic | 35.0% | |
| TTCTTATAAATAGGACCGGA+GGG | - | chr2_3:51347347-51347366 | None:intergenic | 35.0% | |
| TTTCTTATAAATAGGACCGG+AGG | - | chr2_3:51347348-51347367 | None:intergenic | 35.0% | |
| !!! | GTTGGTCTTTTCAATATTGG+TGG | + | chr2_3:51347463-51347482 | Msa0297630:intron | 35.0% |
| GCAACAACTAATGATTGTCT+TGG | + | chr2_3:51347549-51347568 | Msa0297630:intron | 35.0% | |
| GGAAATGACCTATATTACAG+AGG | + | chr2_3:51347837-51347856 | Msa0297630:intron | 35.0% | |
| TGCTTTACCCTCTGTAATAT+AGG | - | chr2_3:51347848-51347867 | None:intergenic | 35.0% | |
| CGATAACGAAAAAGGAACAA+AGG | + | chr2_3:51347958-51347977 | Msa0297630:intron | 35.0% | |
| ! | TGTGAGGTTTTCGTTTAGAT+AGG | + | chr2_3:51348066-51348085 | Msa0297630:intron | 35.0% |
| ! | GTTGATTTCATTTCTGCGTT+TGG | + | chr2_3:51348105-51348124 | Msa0297630:intron | 35.0% |
| ATTTCATTTCTGCGTTTGGT+TGG | + | chr2_3:51348109-51348128 | Msa0297630:intron | 35.0% | |
| TAATGAAGGTAAGACTCTGA+AGG | + | chr2_3:51348426-51348445 | Msa0297630:CDS | 35.0% | |
| TCTTAGAAAATGCGATAGAC+TGG | + | chr2_3:51348551-51348570 | Msa0297630:three_prime_UTR | 35.0% | |
| CTTAGAAAATGCGATAGACT+GGG | + | chr2_3:51348552-51348571 | Msa0297630:three_prime_UTR | 35.0% | |
| ! | AATGACATTTTGCGCTTTCT+GGG | - | chr2_3:51348688-51348707 | None:intergenic | 35.0% |
| ! | AAATGACATTTTGCGCTTTC+TGG | - | chr2_3:51348689-51348708 | None:intergenic | 35.0% |
| ! | ATCTGGGTAGCACTGAATTA+GGG | - | chr2_3:51344385-51344404 | None:intergenic | 40.0% |
| TGTTAAGTAGAGAGAGAGAG+AGG | + | chr2_3:51344621-51344640 | Msa0297630:intron | 40.0% | |
| TTCAACTTGCGATAGTCCAA+GGG | - | chr2_3:51344747-51344766 | None:intergenic | 40.0% | |
| TTGTGCAGCCTTACAAAGAT+AGG | + | chr2_3:51344847-51344866 | Msa0297630:CDS | 40.0% | |
| TTCTTTCTGCCAAACTTGTC+TGG | + | chr2_3:51345027-51345046 | Msa0297630:CDS | 40.0% | |
| TCTTTCTGCCAAACTTGTCT+GGG | + | chr2_3:51345028-51345047 | Msa0297630:CDS | 40.0% | |
| TATGTGGATGTCAATGCGAA+TGG | - | chr2_3:51345054-51345073 | None:intergenic | 40.0% | |
| ATCCACATACTAGACAATGC+AGG | + | chr2_3:51345065-51345084 | Msa0297630:CDS | 40.0% | |
| TCCACATACTAGACAATGCA+GGG | + | chr2_3:51345066-51345085 | Msa0297630:CDS | 40.0% | |
| ! | CAGTAAGTTGGGTAAGAAAG+AGG | - | chr2_3:51345120-51345139 | None:intergenic | 40.0% |
| TGCTGCAAATATTGCTGCAT+TGG | + | chr2_3:51345206-51345225 | Msa0297630:CDS | 40.0% | |
| ! | CATCTCTGAAGACATTCAGA+AGG | + | chr2_3:51345229-51345248 | Msa0297630:CDS | 40.0% |
| AAATAGAAAACAGGGGCGAA+AGG | - | chr2_3:51345339-51345358 | None:intergenic | 40.0% | |
| GCGGAAGCTAAATAGAAAAC+AGG | - | chr2_3:51345348-51345367 | None:intergenic | 40.0% | |
| ATGAAGAGGCTGTAATGACT+GGG | + | chr2_3:51345637-51345656 | Msa0297630:CDS | 40.0% | |
| TGTGTGCAATTCAAAAGCCT+GGG | + | chr2_3:51345694-51345713 | Msa0297630:CDS | 40.0% | |
| !! | CATAGGCATTGAAAGAGTGA+GGG | - | chr2_3:51345844-51345863 | None:intergenic | 40.0% |
| !! | TCATAGGCATTGAAAGAGTG+AGG | - | chr2_3:51345845-51345864 | None:intergenic | 40.0% |
| AGATGCATCGTTCTGTTCAT+AGG | - | chr2_3:51345861-51345880 | None:intergenic | 40.0% | |
| TGCAATGAAAGGCAAACAGA+AGG | - | chr2_3:51346015-51346034 | None:intergenic | 40.0% | |
| !!! | ATTTTGTTTTCCCCCTAACG+TGG | - | chr2_3:51346279-51346298 | None:intergenic | 40.0% |
| GAATGTGATGCCACATCATT+AGG | + | chr2_3:51346368-51346387 | Msa0297630:CDS | 40.0% | |
| ! | TACTTGGTCTTTCACTTCTC+AGG | + | chr2_3:51346705-51346724 | Msa0297630:intron | 40.0% |
| ! | ACTTGGTCTTTCACTTCTCA+GGG | + | chr2_3:51346706-51346725 | Msa0297630:intron | 40.0% |
| CACTCTATTTAGCTGCACTT+AGG | + | chr2_3:51346858-51346877 | Msa0297630:intron | 40.0% | |
| TGTCTTCTAAACAGAATGGG+TGG | - | chr2_3:51346981-51347000 | None:intergenic | 40.0% | |
| !!! | GGAGGGAGTATTGTTTTACA+TGG | - | chr2_3:51347033-51347052 | None:intergenic | 40.0% |
| !!! | AATTTTTTTGGTGGTGTCCG+GGG | + | chr2_3:51347193-51347212 | Msa0297630:intron | 40.0% |
| CATAATATATGCAAGGTCCG+GGG | - | chr2_3:51347225-51347244 | None:intergenic | 40.0% | |
| GCATAATATATGCAAGGTCC+GGG | - | chr2_3:51347226-51347245 | None:intergenic | 40.0% | |
| ! | AGAGCTTAACTCAGTTGGTA+AGG | - | chr2_3:51347254-51347273 | None:intergenic | 40.0% |
| TACCAACTGAGTTAAGCTCT+TGG | + | chr2_3:51347254-51347273 | Msa0297630:intron | 40.0% | |
| TAAGCTCTTGGAGACAACTA+AGG | + | chr2_3:51347266-51347285 | Msa0297630:intron | 40.0% | |
| AAGCTCTTGGAGACAACTAA+GGG | + | chr2_3:51347267-51347286 | Msa0297630:intron | 40.0% | |
| ! | ACCGGAGGGAGTATATTATA+GGG | - | chr2_3:51347333-51347352 | None:intergenic | 40.0% |
| !! | GTAGGTCATTGACTCATTTC+CGG | + | chr2_3:51347617-51347636 | Msa0297630:intron | 40.0% |
| !!! | GTTTTGGAATACCCCCTAAT+AGG | + | chr2_3:51347689-51347708 | Msa0297630:intron | 40.0% |
| !!! | GTTTTGGAATACCCCCTAAT+AGG | - | chr2_3:51347689-51347708 | None:intergenic | 40.0% |
| AAAGTTTACAGAGGGGAAAC+CGG | + | chr2_3:51347816-51347835 | Msa0297630:intron | 40.0% | |
| GAACAAAGGGAGTAATGTAG+AGG | + | chr2_3:51347972-51347991 | Msa0297630:intron | 40.0% | |
| ! | TATTCTACAAGGAGTGTGTG+AGG | + | chr2_3:51348050-51348069 | Msa0297630:intron | 40.0% |
| CCAACTGCTTCCTACAACAA+AGG | - | chr2_3:51344112-51344131 | None:intergenic | 45.0% | |
| ! | CCTTTGTTGTAGGAAGCAGT+TGG | + | chr2_3:51344109-51344128 | Msa0297630:five_prime_UTR | 45.0% |
| ! | TTGGAGTTGCACCTTTTCGT+CGG | + | chr2_3:51344128-51344147 | Msa0297630:five_prime_UTR | 45.0% |
| ! | TGTTTCTGCTTCCGACGAAA+AGG | - | chr2_3:51344142-51344161 | None:intergenic | 45.0% |
| ! | CATCTGGGTAGCACTGAATT+AGG | - | chr2_3:51344386-51344405 | None:intergenic | 45.0% |
| TCTTCTATCAGAGCTTCGAG+TGG | + | chr2_3:51344710-51344729 | Msa0297630:CDS | 45.0% | |
| TCAACTTGCGATAGTCCAAG+GGG | - | chr2_3:51344746-51344765 | None:intergenic | 45.0% | |
| GTTCAACTTGCGATAGTCCA+AGG | - | chr2_3:51344748-51344767 | None:intergenic | 45.0% | |
| CTTCACTGAATTCTCTCCCA+TGG | + | chr2_3:51344893-51344912 | Msa0297630:CDS | 45.0% | |
| TCAAAGGAAGGATCAGCCAT+GGG | - | chr2_3:51344912-51344931 | None:intergenic | 45.0% | |
| TTAGGACGCATTATAGACCG+CGG | + | chr2_3:51344963-51344982 | Msa0297630:CDS | 45.0% | |
| GCATTATAGACCGCGGTTTA+CGG | + | chr2_3:51344970-51344989 | Msa0297630:CDS | 45.0% | |
| CATTATAGACCGCGGTTTAC+GGG | + | chr2_3:51344971-51344990 | Msa0297630:CDS | 45.0% | |
| ACCCTGCATTGTCTAGTATG+TGG | - | chr2_3:51345070-51345089 | None:intergenic | 45.0% | |
| AAGGTCACGCTGTTAAACTG+AGG | - | chr2_3:51345320-51345339 | None:intergenic | 45.0% | |
| AATCCAAAGGTGACTGCAAC+TGG | - | chr2_3:51345439-51345458 | None:intergenic | 45.0% | |
| ACAGCCTCTTCATGGTATGT+CGG | - | chr2_3:51345630-51345649 | None:intergenic | 45.0% | |
| CAGTCATTACAGCCTCTTCA+TGG | - | chr2_3:51345638-51345657 | None:intergenic | 45.0% | |
| CATGAAGAGGCTGTAATGAC+TGG | + | chr2_3:51345636-51345655 | Msa0297630:CDS | 45.0% | |
| GTGTGTGCAATTCAAAAGCC+TGG | + | chr2_3:51345693-51345712 | Msa0297630:CDS | 45.0% | |
| GTGTGCAATTCAAAAGCCTG+GGG | + | chr2_3:51345695-51345714 | Msa0297630:CDS | 45.0% | |
| TGTGCAATTCAAAAGCCTGG+GGG | + | chr2_3:51345696-51345715 | Msa0297630:CDS | 45.0% | |
| GCACACTTCACTGCAATGAA+AGG | - | chr2_3:51346026-51346045 | None:intergenic | 45.0% | |
| ACGACATTCTTCCTCTGTTG+CGG | + | chr2_3:51346232-51346251 | Msa0297630:CDS | 45.0% | |
| CTAGACCAGTTGAAGCTGAA+AGG | + | chr2_3:51346329-51346348 | Msa0297630:CDS | 45.0% | |
| CTGCACTTGTCCTAATGATG+TGG | - | chr2_3:51346381-51346400 | None:intergenic | 45.0% | |
| ACAAGTGCAGAGTAGCAAGA+AGG | + | chr2_3:51346391-51346410 | Msa0297630:CDS | 45.0% | |
| ! | AAAGCTTCTCTAGCTTCTCG+TGG | + | chr2_3:51346764-51346783 | Msa0297630:CDS | 45.0% |
| GACAACTAAAAGGGAACGGA+GGG | - | chr2_3:51347050-51347069 | None:intergenic | 45.0% | |
| TGACAACTAAAAGGGAACGG+AGG | - | chr2_3:51347051-51347070 | None:intergenic | 45.0% | |
| CTCCAAGAGCTTAACTCAGT+TGG | - | chr2_3:51347259-51347278 | None:intergenic | 45.0% | |
| ! | GAGGGAGTATATTATAGGGG+GGG | - | chr2_3:51347329-51347348 | None:intergenic | 45.0% |
| ! | GGAGGGAGTATATTATAGGG+GGG | - | chr2_3:51347330-51347349 | None:intergenic | 45.0% |
| ! | CGGAGGGAGTATATTATAGG+GGG | - | chr2_3:51347331-51347350 | None:intergenic | 45.0% |
| ! | CCGGAGGGAGTATATTATAG+GGG | - | chr2_3:51347332-51347351 | None:intergenic | 45.0% |
| CCCCTATAATATACTCCCTC+CGG | + | chr2_3:51347329-51347348 | Msa0297630:intron | 45.0% | |
| ! | GACCGGAGGGAGTATATTAT+AGG | - | chr2_3:51347334-51347353 | None:intergenic | 45.0% |
| TATAAAAGACCGGAGGGAGT+AGG | + | chr2_3:51347599-51347618 | Msa0297630:intron | 45.0% | |
| GCAGTTAGAGCAGTGTCAAT+TGG | - | chr2_3:51348397-51348416 | None:intergenic | 45.0% | |
| ATTGACACTGCTCTAACTGC+TGG | + | chr2_3:51348397-51348416 | Msa0297630:CDS | 45.0% | |
| TTGACACTGCTCTAACTGCT+GGG | + | chr2_3:51348398-51348417 | Msa0297630:CDS | 45.0% | |
| !!! | AAAATTTTCAAAAAAAATTT+TGG | + | chr2_3:51347365-51347384 | Msa0297630:intron | 5.0% |
| !! | ATAAAAAATAATAATTTACA+GGG | - | chr2_3:51347647-51347666 | None:intergenic | 5.0% |
| !! | AATAAAAAATAATAATTTAC+AGG | - | chr2_3:51347648-51347667 | None:intergenic | 5.0% |
| AGTAGAGAGAGAGAGAGGCA+TGG | + | chr2_3:51344626-51344645 | Msa0297630:intron | 50.0% | |
| CTATCAGAGCTTCGAGTGGA+TGG | + | chr2_3:51344714-51344733 | Msa0297630:CDS | 50.0% | |
| TGTCTCGCCCAATTGGATCT+CGG | - | chr2_3:51344799-51344818 | None:intergenic | 50.0% | |
| CTCAAAGGAAGGATCAGCCA+TGG | - | chr2_3:51344913-51344932 | None:intergenic | 50.0% | |
| AACTCAACGGCAGATTCTCC+AGG | - | chr2_3:51344945-51344964 | None:intergenic | 50.0% | |
| GGAGAATCTGCCGTTGAGTT+AGG | + | chr2_3:51344945-51344964 | Msa0297630:CDS | 50.0% | |
| CTCTACTTTCCCGTAAACCG+CGG | - | chr2_3:51344983-51345002 | None:intergenic | 50.0% | |
| GCAGAGCGATTCAGTGTCAA+TGG | - | chr2_3:51345006-51345025 | None:intergenic | 50.0% | |
| AGAAGGCCTGAATGCTCGTT+GGG | + | chr2_3:51345246-51345265 | Msa0297630:CDS | 50.0% | |
| AGTTGTAGTGCATCCTCCTG+AGG | + | chr2_3:51345287-51345306 | Msa0297630:CDS | 50.0% | |
| AAACTGAGGAAGCTGACCTC+AGG | - | chr2_3:51345306-51345325 | None:intergenic | 50.0% | |
| CTTCCAGTTGCAGTCACCTT+TGG | + | chr2_3:51345433-51345452 | Msa0297630:CDS | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | - | chr2_3:51345518-51345537 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr2_3:51345517-51345536 | None:intergenic | 50.0% | |
| GGATCCGACATACCATGAAG+AGG | + | chr2_3:51345623-51345642 | Msa0297630:CDS | 50.0% | |
| GTGCAATTCAAAAGCCTGGG+GGG | + | chr2_3:51345697-51345716 | Msa0297630:CDS | 50.0% | |
| ACATTCTTCCTCTGTTGCGG+TGG | + | chr2_3:51346235-51346254 | Msa0297630:CDS | 50.0% | |
| ACATACATCCACCGCAACAG+AGG | - | chr2_3:51346246-51346265 | None:intergenic | 50.0% | |
| TCTGTTGCGGTGGATGTATG+TGG | + | chr2_3:51346245-51346264 | Msa0297630:CDS | 50.0% | |
| TCTCGCCTTTCAGCTTCAAC+TGG | - | chr2_3:51346337-51346356 | None:intergenic | 50.0% | |
| GTGCAGAGTAGCAAGAAGGA+TGG | + | chr2_3:51346395-51346414 | Msa0297630:CDS | 50.0% | |
| CTGACACCTTACCAGCTTGA+GGG | - | chr2_3:51346445-51346464 | None:intergenic | 50.0% | |
| ACTGACACCTTACCAGCTTG+AGG | - | chr2_3:51346446-51346465 | None:intergenic | 50.0% | |
| AGTCAATGACCTACTCCCTC+CGG | - | chr2_3:51347611-51347630 | None:intergenic | 50.0% | |
| !! | ATTTCCTGCGCTGGTTCTTC+TGG | - | chr2_3:51348358-51348377 | None:intergenic | 50.0% |
| ACTGTCTTGATTTCCTGCGC+TGG | - | chr2_3:51348367-51348386 | None:intergenic | 50.0% | |
| ACTGCTGGGCAGAGTAATGA+AGG | + | chr2_3:51348412-51348431 | Msa0297630:CDS | 50.0% | |
| CTGTCAAGCCCAAGAACAAG+AGG | + | chr2_3:51348452-51348471 | Msa0297630:CDS | 50.0% | |
| CAGAGCTTCGAGTGGATGGT+CGG | + | chr2_3:51344718-51344737 | Msa0297630:CDS | 55.0% | |
| AGAGCTTCGAGTGGATGGTC+GGG | + | chr2_3:51344719-51344738 | Msa0297630:CDS | 55.0% | |
| TGGGTCTGCCGAGATCCAAT+TGG | + | chr2_3:51344788-51344807 | Msa0297630:CDS | 55.0% | |
| GGGTCTGCCGAGATCCAATT+GGG | + | chr2_3:51344789-51344808 | Msa0297630:CDS | 55.0% | |
| TGACACGTGTCTCGCCCAAT+TGG | - | chr2_3:51344806-51344825 | None:intergenic | 55.0% | |
| GCTGATCCTTCCTTTGAGCC+TGG | + | chr2_3:51344915-51344934 | Msa0297630:CDS | 55.0% | |
| CAACGGCAGATTCTCCAGGA+CGG | - | chr2_3:51344941-51344960 | None:intergenic | 55.0% | |
| GCGAATGGCCCAGACAAGTT+TGG | - | chr2_3:51345039-51345058 | None:intergenic | 55.0% | |
| CAGAAGGCCTGAATGCTCGT+TGG | + | chr2_3:51345245-51345264 | Msa0297630:CDS | 55.0% | |
| GAAGGCCTGAATGCTCGTTG+GGG | + | chr2_3:51345247-51345266 | Msa0297630:CDS | 55.0% | |
| AAGGCCTGAATGCTCGTTGG+GGG | + | chr2_3:51345248-51345267 | Msa0297630:CDS | 55.0% | |
| GAGAGAGAGAGAGAGAGGGA+GGG | - | chr2_3:51345514-51345533 | None:intergenic | 55.0% | |
| AGAGAGAGAGAGAGAGAGGG+AGG | - | chr2_3:51345515-51345534 | None:intergenic | 55.0% | |
| AATTCAAAAGCCTGGGGGGC+AGG | + | chr2_3:51345701-51345720 | Msa0297630:CDS | 55.0% | |
| ATTCAAAAGCCTGGGGGGCA+GGG | + | chr2_3:51345702-51345721 | Msa0297630:CDS | 55.0% | |
| TGTGGAACCACTGCCACGTT+AGG | + | chr2_3:51346263-51346282 | Msa0297630:CDS | 55.0% | |
| GTGGAACCACTGCCACGTTA+GGG | + | chr2_3:51346264-51346283 | Msa0297630:CDS | 55.0% | |
| TGGAACCACTGCCACGTTAG+GGG | + | chr2_3:51346265-51346284 | Msa0297630:CDS | 55.0% | |
| ! | TTTTCCCCCTAACGTGGCAG+TGG | - | chr2_3:51346273-51346292 | None:intergenic | 55.0% |
| TTTATCGGTGGCCCTCAAGC+TGG | + | chr2_3:51346431-51346450 | Msa0297630:CDS | 55.0% | |
| TAAGCCAGAAGAACCAGCGC+AGG | + | chr2_3:51348351-51348370 | Msa0297630:CDS | 55.0% | |
| GAGCTTCGAGTGGATGGTCG+GGG | + | chr2_3:51344720-51344739 | Msa0297630:CDS | 60.0% | |
| AGGCCTGAATGCTCGTTGGG+GGG | + | chr2_3:51345249-51345268 | Msa0297630:CDS | 60.0% | |
| TCTCCCCCCAACGAGCATTC+AGG | - | chr2_3:51345255-51345274 | None:intergenic | 60.0% | |
| TGAATGCTCGTTGGGGGGAG+AGG | + | chr2_3:51345254-51345273 | Msa0297630:CDS | 60.0% | |
| CTGAGGAAGCTGACCTCAGG+AGG | - | chr2_3:51345303-51345322 | None:intergenic | 60.0% | |
| GAGAGAGAGAGGGAGGGAGA+GGG | - | chr2_3:51345508-51345527 | None:intergenic | 60.0% | |
| AGAGAGAGAGAGGGAGGGAG+AGG | - | chr2_3:51345509-51345528 | None:intergenic | 60.0% | |
| GGAACCACTGCCACGTTAGG+GGG | + | chr2_3:51346266-51346285 | Msa0297630:CDS | 60.0% | |
| GGACGGCCAGGCTCAAAGGA+AGG | - | chr2_3:51344924-51344943 | None:intergenic | 65.0% | |
| TCCTTTGAGCCTGGCCGTCC+TGG | + | chr2_3:51344924-51344943 | Msa0297630:CDS | 65.0% | |
| TCCAGGACGGCCAGGCTCAA+AGG | - | chr2_3:51344928-51344947 | None:intergenic | 65.0% | |
| GCAGATTCTCCAGGACGGCC+AGG | - | chr2_3:51344936-51344955 | None:intergenic | 65.0% | |
| TGCTCGTTGGGGGGAGAGGA+TGG | + | chr2_3:51345258-51345277 | Msa0297630:CDS | 65.0% | |
| AGAGAGGGAGGGAGAGGGAG+GGG | - | chr2_3:51345503-51345522 | None:intergenic | 65.0% | |
| GAGAGAGGGAGGGAGAGGGA+GGG | - | chr2_3:51345504-51345523 | None:intergenic | 65.0% | |
| AGAGAGAGGGAGGGAGAGGG+AGG | - | chr2_3:51345505-51345524 | None:intergenic | 65.0% | |
| TGAAAGACACCCTGCCCCCC+AGG | - | chr2_3:51345714-51345733 | None:intergenic | 65.0% | |
| CGGTGGCCCTCAAGCTGGTA+AGG | + | chr2_3:51346436-51346455 | Msa0297630:CDS | 65.0% | |
| AAGGTCCGGGGTTCGAACCC+CGG | - | chr2_3:51347213-51347232 | None:intergenic | 65.0% | |
| AGTGGATGGTCGGGGCCCCT+TGG | + | chr2_3:51344728-51344747 | Msa0297630:CDS | 70.0% | |
| GAGAGGGAGGGAGAGGGAGG+GGG | - | chr2_3:51345502-51345521 | None:intergenic | 70.0% | |
| GGTGTCCGGGGTTCGAACCC+CGG | + | chr2_3:51347205-51347224 | Msa0297630:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 51344033 | 51348790 | 51344033 | ID=Msa0297630;Name=Msa0297630 |
| chr2_3 | mRNA | 51344033 | 51348790 | 51344033 | ID=Msa0297630-mRNA-1;Parent=Msa0297630;Name=Msa0297630-mRNA-1;_AED=0.07;_eAED=0.07;_QI=147|0.85|0.87|1|0.85|0.75|8|283|451 |
| chr2_3 | exon | 51344033 | 51344165 | 51344033 | ID=Msa0297630-mRNA-1:exon:16302;Parent=Msa0297630-mRNA-1 |
| chr2_3 | exon | 51344631 | 51345087 | 51344631 | ID=Msa0297630-mRNA-1:exon:16303;Parent=Msa0297630-mRNA-1 |
| chr2_3 | exon | 51345194 | 51345308 | 51345194 | ID=Msa0297630-mRNA-1:exon:16304;Parent=Msa0297630-mRNA-1 |
| chr2_3 | exon | 51345400 | 51345480 | 51345400 | ID=Msa0297630-mRNA-1:exon:16305;Parent=Msa0297630-mRNA-1 |
| chr2_3 | exon | 51345618 | 51345806 | 51345618 | ID=Msa0297630-mRNA-1:exon:16306;Parent=Msa0297630-mRNA-1 |
| chr2_3 | exon | 51346191 | 51346459 | 51346191 | ID=Msa0297630-mRNA-1:exon:16307;Parent=Msa0297630-mRNA-1 |
| chr2_3 | exon | 51346727 | 51346785 | 51346727 | ID=Msa0297630-mRNA-1:exon:16308;Parent=Msa0297630-mRNA-1 |
| chr2_3 | exon | 51348308 | 51348790 | 51348308 | ID=Msa0297630-mRNA-1:exon:16309;Parent=Msa0297630-mRNA-1 |
| chr2_3 | five_prime_UTR | 51344033 | 51344165 | 51344033 | ID=Msa0297630-mRNA-1:five_prime_utr;Parent=Msa0297630-mRNA-1 |
| chr2_3 | five_prime_UTR | 51344631 | 51344644 | 51344631 | ID=Msa0297630-mRNA-1:five_prime_utr;Parent=Msa0297630-mRNA-1 |
| chr2_3 | CDS | 51344645 | 51345087 | 51344645 | ID=Msa0297630-mRNA-1:cds;Parent=Msa0297630-mRNA-1 |
| chr2_3 | CDS | 51345194 | 51345308 | 51345194 | ID=Msa0297630-mRNA-1:cds;Parent=Msa0297630-mRNA-1 |
| chr2_3 | CDS | 51345400 | 51345480 | 51345400 | ID=Msa0297630-mRNA-1:cds;Parent=Msa0297630-mRNA-1 |
| chr2_3 | CDS | 51345618 | 51345806 | 51345618 | ID=Msa0297630-mRNA-1:cds;Parent=Msa0297630-mRNA-1 |
| chr2_3 | CDS | 51346191 | 51346459 | 51346191 | ID=Msa0297630-mRNA-1:cds;Parent=Msa0297630-mRNA-1 |
| chr2_3 | CDS | 51346727 | 51346785 | 51346727 | ID=Msa0297630-mRNA-1:cds;Parent=Msa0297630-mRNA-1 |
| chr2_3 | CDS | 51348308 | 51348507 | 51348308 | ID=Msa0297630-mRNA-1:cds;Parent=Msa0297630-mRNA-1 |
| chr2_3 | three_prime_UTR | 51348508 | 51348790 | 51348508 | ID=Msa0297630-mRNA-1:three_prime_utr;Parent=Msa0297630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
