AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0185280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0185280 MtrunA17_Chr2g0331901 98.135 858 16 0 1 858 1 858 0.0 1744
Msa0185280 MtrunA17_Chr4g0004331 80.349 860 158 5 1 858 1 851 0.0 1338
Msa0185280 MtrunA17_Chr3g0098761 50.000 790 345 5 1 786 1 744 0.0 778
Msa0185280 MtrunA17_Chr5g0444001 58.476 525 205 4 1 519 1 518 0.0 635
Msa0185280 MtrunA17_Chr7g0262821 33.758 471 293 6 4 469 10 466 2.92e-85 285
Msa0185280 MtrunA17_Chr4g0031301 33.623 461 288 5 4 459 10 457 1.72e-83 281
Msa0185280 MtrunA17_Chr7g0223181 34.703 438 270 4 4 438 10 434 1.84e-83 280
Msa0185280 MtrunA17_Chr4g0073741 34.475 438 271 4 4 438 9 433 1.05e-82 278
Msa0185280 MtrunA17_Chr7g0223291 33.623 461 288 5 4 459 10 457 3.02e-82 277
Msa0185280 MtrunA17_Chr6g0462771 34.821 448 267 6 4 441 10 442 1.84e-81 275
Msa0185280 MtrunA17_Chr4g0031321 32.696 471 298 6 4 469 10 466 4.23e-81 274
Msa0185280 MtrunA17_Chr6g0462601 36.406 434 258 7 4 433 10 429 1.38e-79 270
Msa0185280 MtrunA17_Chr6g0462641 34.157 445 268 6 4 438 10 439 2.87e-77 265
Msa0185280 MtrunA17_Chr6g0462681 34.793 434 263 6 4 432 10 428 4.43e-77 264
Msa0185280 MtrunA17_Chr3g0120101 28.029 842 509 26 2 780 25 832 1.01e-76 267
Msa0185280 MtrunA17_Chr6g0462711 33.485 439 270 6 4 433 11 436 4.89e-76 261
Msa0185280 MtrunA17_Chr8g0350731 34.052 464 279 8 4 463 38 478 1.54e-75 259
Msa0185280 MtrunA17_Chr7g0223711 33.030 439 277 5 4 438 10 435 3.17e-75 257
Msa0185280 MtrunA17_Chr7g0223751 33.486 436 271 6 4 434 10 431 4.13e-75 257
Msa0185280 MtrunA17_Chr7g0223031 33.713 439 274 7 4 438 10 435 6.09e-75 256
Msa0185280 MtrunA17_Chr8g0388761 32.328 464 291 7 2 459 37 483 3.22e-74 256
Msa0185280 MtrunA17_Chr2g0298851 33.182 440 278 6 4 439 10 437 3.78e-74 254
Msa0185280 MtrunA17_Chr7g0248131 34.642 433 266 6 4 431 10 430 5.83e-74 254
Msa0185280 MtrunA17_Chr7g0233311 34.974 386 245 5 4 385 10 393 7.39e-74 254
Msa0185280 MtrunA17_Chr7g0223731 33.190 464 283 8 4 463 10 450 8.38e-74 253
Msa0185280 MtrunA17_Chr7g0223701 33.554 453 277 8 4 452 10 442 8.55e-74 254
Msa0185280 MtrunA17_Chr7g0225671 33.483 445 276 8 4 442 17 447 2.60e-73 252
Msa0185280 MtrunA17_Chr2g0299921 35.356 379 241 2 4 381 1030 1405 6.74e-73 261
Msa0185280 MtrunA17_Chr2g0299921 34.474 380 244 3 4 381 1414 1790 2.75e-62 229
Msa0185280 MtrunA17_Chr8g0388671 31.681 464 294 7 2 459 37 483 8.43e-73 252
Msa0185280 MtrunA17_Chr7g0223741 33.032 442 279 5 4 441 10 438 1.11e-72 250
Msa0185280 MtrunA17_Chr5g0427901 34.383 413 255 5 4 401 10 421 1.17e-72 251
Msa0185280 MtrunA17_Chr7g0221661 36.483 381 238 4 4 381 10 389 5.30e-72 248
Msa0185280 MtrunA17_Chr7g0223851 33.333 435 274 6 4 434 19 441 7.08e-72 248
Msa0185280 MtrunA17_Chr2g0293581 33.409 440 276 6 4 439 11 437 7.42e-72 248
Msa0185280 MtrunA17_Chr7g0223801 33.636 440 272 8 4 438 10 434 1.20e-71 248
Msa0185280 MtrunA17_Chr2g0284681 32.273 440 276 5 4 434 9 435 2.00e-71 246
Msa0185280 MtrunA17_Chr7g0223721 32.754 403 266 5 4 402 10 411 7.90e-71 245
Msa0185280 MtrunA17_Chr2g0298861 31.532 444 277 7 3 431 9 440 1.10e-70 245
Msa0185280 MtrunA17_Chr2g0299851 35.092 379 242 2 4 381 1039 1414 2.58e-70 253
Msa0185280 MtrunA17_Chr7g0223781 32.353 442 274 6 4 438 10 433 4.44e-70 243
Msa0185280 MtrunA17_Chr2g0299791 35.884 379 239 2 4 381 1043 1418 5.48e-70 253
Msa0185280 MtrunA17_Chr2g0296391 31.947 457 288 7 4 455 10 448 1.06e-69 240
Msa0185280 MtrunA17_Chr7g0223821 31.713 432 281 5 4 431 10 431 1.23e-69 244
Msa0185280 MtrunA17_Chr7g0223621 31.973 441 283 5 2 438 8 435 3.10e-69 241
Msa0185280 MtrunA17_Chr2g0293601 33.014 418 275 4 4 417 10 426 3.87e-69 237
Msa0185280 MtrunA17_Chr7g0248151 32.333 433 276 5 4 432 10 429 9.39e-69 240
Msa0185280 MtrunA17_Chr4g0040931 31.019 432 281 6 4 431 10 428 1.13e-68 239
Msa0185280 MtrunA17_Chr7g0223631 35.696 381 227 5 4 381 10 375 2.08e-67 235
Msa0185280 MtrunA17_Chr7g0233301 33.679 386 250 5 4 385 10 393 4.49e-67 234
Msa0185280 MtrunA17_Chr2g0279901 33.416 404 251 5 3 401 56 446 5.92e-66 233
Msa0185280 MtrunA17_Chr2g0287631 33.766 385 251 3 4 385 10 393 1.02e-65 231
Msa0185280 MtrunA17_Chr2g0299821 32.338 402 260 5 4 398 10 406 2.95e-65 226
Msa0185280 MtrunA17_Chr2g0299881 34.115 384 245 3 3 381 1038 1418 1.31e-63 233
Msa0185280 MtrunA17_Chr6g0462611 36.795 337 207 4 68 401 24 357 2.35e-63 224
Msa0185280 MtrunA17_Chr7g0217971 31.841 402 245 5 4 401 10 386 2.08e-62 221
Msa0185280 MtrunA17_Chr4g0049501 31.188 404 261 5 3 401 53 444 3.23e-62 223
Msa0185280 MtrunA17_Chr2g0293561 32.877 365 239 4 4 364 10 372 3.29e-62 215
Msa0185280 MtrunA17_Chr2g0331381 31.579 437 256 8 2 434 5 402 6.13e-61 214
Msa0185280 MtrunA17_Chr4g0012541 30.905 453 280 10 4 450 10 435 1.35e-60 217
Msa0185280 MtrunA17_Chr7g0223541 33.062 369 232 5 68 434 33 388 1.49e-56 204
Msa0185280 MtrunA17_Chr7g0215261 28.767 438 262 9 4 438 10 400 6.80e-55 200
Msa0185280 MtrunA17_Chr7g0223831 29.777 403 250 6 4 402 10 383 4.15e-54 198
Msa0185280 MtrunA17_Chr1g0151991 33.091 275 181 3 4 276 10 283 5.47e-54 189
Msa0185280 MtrunA17_Chr2g0277021 30.700 443 275 9 3 438 71 488 6.78e-54 199
Msa0185280 MtrunA17_Chr7g0228281 32.416 327 216 3 4 327 71 395 1.03e-53 197
Msa0185280 MtrunA17_Chr7g0223681 32.565 347 217 5 88 431 7 339 6.31e-51 187
Msa0185280 MtrunA17_Chr6g0462861 29.122 467 297 10 4 465 10 447 1.19e-50 189
Msa0185280 MtrunA17_Chr8g0390821 29.857 489 258 14 4 436 12 471 1.97e-50 188
Msa0185280 MtrunA17_Chr7g0245521 34.091 264 171 3 4 265 10 272 5.24e-47 169
Msa0185280 MtrunA17_Chr2g0293271 28.065 367 213 3 15 381 45 360 2.94e-42 159
Msa0185280 MtrunA17_Chr1g0166551 26.866 402 217 7 4 401 6 334 5.54e-40 155
Msa0185280 MtrunA17_Chr5g0444011 40.722 194 99 2 595 779 1 187 2.85e-36 135
Msa0185280 MtrunA17_Chr6g0462791 38.547 179 108 2 100 278 1 177 3.33e-34 129
Msa0185280 MtrunA17_Chr1g0188601 36.508 189 117 2 88 275 5 191 8.89e-34 128
Msa0185280 MtrunA17_Chr7g0223671 36.216 185 117 1 68 252 10 193 1.59e-33 128
Msa0185280 MtrunA17_Chr6g0462631 29.032 310 172 6 99 404 29 294 5.28e-32 126
Msa0185280 MtrunA17_Chr6g0462751 26.901 342 187 7 68 404 21 304 2.16e-28 116
Msa0185280 MtrunA17_Chr7g0223861 41.379 116 68 0 70 185 4 119 1.12e-26 106
Msa0185280 MtrunA17_Chr5g0394391 23.608 449 312 10 4 438 30 461 8.48e-24 107
Msa0185280 MtrunA17_Chr7g0223771 31.126 151 103 1 88 238 4 153 2.73e-22 94.7
Msa0185280 MtrunA17_Chr4g0046881 34.507 142 89 2 127 268 14 151 1.28e-19 86.7
Msa0185280 MtrunA17_Chr4g0060241 23.881 402 263 13 4 383 21 401 5.70e-18 88.6
Msa0185280 MtrunA17_Chr7g0223761 26.484 219 143 6 234 447 3 208 1.26e-17 85.5
Msa0185280 MtrunA17_Chr4g0064621 23.142 471 296 16 4 438 141 581 2.83e-17 86.7
Msa0185280 MtrunA17_Chr6g0462701 31.138 167 86 4 99 263 29 168 1.48e-16 78.2
Msa0185280 MtrunA17_Chr6g0481391 32.231 121 79 1 30 150 13 130 9.11e-16 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0185280 AT1G79930.1 75.352 852 180 4 1 850 1 824 0.0 1322
Msa0185280 AT1G79930.2 79.385 781 156 2 1 779 1 778 0.0 1294
Msa0185280 AT1G79920.1 80.310 645 122 2 1 643 1 642 0.0 1082
Msa0185280 AT1G79920.3 80.155 645 123 2 1 643 1 642 0.0 1060
Msa0185280 AT1G79920.2 80.155 645 123 2 1 643 1 642 0.0 1060
Msa0185280 AT1G79920.4 80.155 645 123 2 1 643 1 642 0.0 1060
Msa0185280 AT1G11660.4 49.313 801 346 9 1 796 1 746 0.0 763
Msa0185280 AT1G11660.3 49.313 801 346 9 1 796 1 746 0.0 763
Msa0185280 AT1G11660.1 49.313 801 346 9 1 796 1 746 0.0 763
Msa0185280 AT1G11660.2 47.906 764 338 9 38 796 1 709 0.0 699
Msa0185280 AT1G16030.1 33.192 473 297 6 4 471 9 467 6.40e-84 282
Msa0185280 AT5G02500.1 33.406 461 289 5 4 459 10 457 2.04e-83 281
Msa0185280 AT5G02500.2 36.412 379 239 2 4 381 10 387 7.83e-83 275
Msa0185280 AT3G12580.1 34.018 438 273 4 4 438 10 434 8.30e-82 276
Msa0185280 AT3G09440.1 33.333 471 295 6 4 469 10 466 9.46e-82 276
Msa0185280 AT3G09440.4 33.333 471 295 6 4 469 10 466 9.46e-82 276
Msa0185280 AT3G09440.2 33.333 471 295 6 4 469 10 466 9.46e-82 276
Msa0185280 AT3G09440.3 33.333 471 295 6 4 469 10 466 9.46e-82 276
Msa0185280 AT1G56410.1 34.663 401 258 3 4 401 10 409 2.15e-78 266
Msa0185280 AT5G02490.1 34.913 401 257 3 4 401 10 409 5.33e-78 266
Msa0185280 AT4G16660.1 26.072 863 571 23 2 823 25 861 3.90e-77 268
Msa0185280 AT4G16660.2 26.072 863 571 23 2 823 49 885 5.49e-77 268
Msa0185280 AT1G09080.2 32.613 463 290 6 2 459 41 486 3.59e-75 259
Msa0185280 AT1G09080.1 32.613 463 290 6 2 459 51 496 7.54e-75 258
Msa0185280 AT5G42020.1 31.466 464 295 7 2 459 36 482 3.52e-74 256
Msa0185280 AT5G42020.2 31.466 464 295 7 2 459 36 482 4.72e-74 254
Msa0185280 AT5G42020.3 31.466 464 295 7 2 459 41 487 6.66e-74 255
Msa0185280 AT5G28540.1 31.466 464 295 7 2 459 36 482 1.33e-73 254
Msa0185280 AT5G09590.1 33.168 404 253 7 3 401 59 450 7.46e-64 228
Msa0185280 AT4G37910.1 32.637 383 243 4 3 380 54 426 1.25e-61 221
Msa0185280 AT4G37910.2 32.637 383 243 4 3 380 54 426 1.25e-61 221
Msa0185280 AT5G49910.1 29.038 520 335 11 3 511 80 576 8.00e-55 202
Msa0185280 AT4G24280.1 30.926 443 274 9 3 438 80 497 2.69e-53 198
Msa0185280 AT2G32120.1 24.336 452 299 12 4 441 31 453 1.78e-19 93.6
Msa0185280 AT2G32120.2 24.336 452 299 12 4 441 31 453 1.78e-19 93.6

Find 246 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGAGTTGTTGGTGTTTC+TGG 0.041222 1_4:+75360408 None:intergenic
CTGGAACTCTCGTACTTTAA+AGG 0.133668 1_4:+75363499 None:intergenic
TTATTTAATATTGTGGTATT+TGG 0.148456 1_4:-75360157 Msa0185280:three_prime_UTR
CCTTCCAAATCTAGTGTTCT+AGG 0.167552 1_4:-75360119 Msa0185280:three_prime_UTR
TCTGAACATCGAGTGCTTAA+TGG 0.188081 1_4:-75363801 Msa0185280:CDS
CTTATATTCCTCCTTAAATT+TGG 0.191974 1_4:+75363916 None:intergenic
AGGACGGGGTTGGCAAATTT+TGG 0.198115 1_4:+75360643 None:intergenic
GGTGACAAACAACGGTTTAT+TGG 0.201798 1_4:-75364523 Msa0185280:CDS
TATTTAATATTGTGGTATTT+GGG 0.207777 1_4:-75360156 Msa0185280:three_prime_UTR
TCCTCCTGAGGTTGCTGTTC+TGG 0.221365 1_4:+75360357 None:intergenic
ATTGATTCATGCACGATATC+TGG 0.221555 1_4:-75364350 Msa0185280:CDS
TTGCATTGCCGGATTTAAAA+AGG 0.228004 1_4:-75364023 Msa0185280:CDS
AATGTCAATGTGATCAAATT+TGG 0.239845 1_4:+75360830 None:intergenic
TAGAACTAACAATTGTGTTT+TGG 0.241586 1_4:-75360003 Msa0185280:three_prime_UTR
GGGGACTGGAATGGAATTTC+GGG 0.241945 1_4:+75365778 None:intergenic
GGCTTGGCCGGCTTCGGTTT+TGG 0.248203 1_4:+75360438 None:intergenic
TGGGGACTGGAATGGAATTT+CGG 0.266169 1_4:+75365777 None:intergenic
CCTGTTGCAGAGGTAGTTTA+TGG 0.277865 1_4:-75361563 Msa0185280:CDS
TTCACAGCTACTCAAGTCTT+TGG 0.281593 1_4:-75364313 Msa0185280:CDS
ACAGCAACTGCCTTGGCTTA+TGG 0.283051 1_4:-75364124 Msa0185280:CDS
AAAGTTCGTTTGAATCTTCA+TGG 0.286356 1_4:-75362365 Msa0185280:CDS
TGGAACAATCTGAAGAAATA+TGG 0.286571 1_4:+75365693 None:intergenic
AGCATGCAAGTTTGCATTGC+CGG 0.294577 1_4:-75364034 Msa0185280:CDS
TCTCTTTCGTGGAAATCTTC+TGG 0.295965 1_4:-75362687 Msa0185280:CDS
GTGACAAACAACGGTTTATT+GGG 0.297139 1_4:-75364522 Msa0185280:CDS
TTCAAATCCCTCTGCAGTTC+CGG 0.301759 1_4:+75364415 None:intergenic
GGTCCTTCAGTGACATTAAA+AGG 0.302527 1_4:+75364385 None:intergenic
TCAGCAGATTCTTTGGTAAC+TGG 0.303908 1_4:+75362132 None:intergenic
GAGTTGTCGACGTGCTTCTT+TGG 0.310750 1_4:+75365879 None:intergenic
TTTCGTCATGATCGGCTTAC+AGG 0.313727 1_4:+75360461 None:intergenic
TCAGACAAGCCCTGGCATTC+TGG 0.315813 1_4:+75363882 None:intergenic
ATTGACAGAGTTCTTCAAAA+AGG 0.324222 1_4:-75363597 Msa0185280:CDS
TGAATTTATTACCAAACTTC+AGG 0.326359 1_4:-75361284 Msa0185280:CDS
GATACCCCTGGGGCTGAAAA+TGG 0.326543 1_4:-75362003 Msa0185280:CDS
CATATTAACATCGTTGTCAT+TGG 0.332496 1_4:+75362047 None:intergenic
TGTCTATGACATGAGAAATA+AGG 0.332501 1_4:-75361429 Msa0185280:intron
AAACCGACCACACTCATCTT+TGG 0.332856 1_4:+75364652 None:intergenic
GCAACTATCTCTTCCAATCT+TGG 0.333522 1_4:-75363735 Msa0185280:CDS
ATCTTCCACCTCCTGAAGTT+TGG 0.336106 1_4:+75361273 None:intergenic
CTTGGCATTGTATACACCTT+TGG 0.340971 1_4:+75361222 None:intergenic
CCAGGGCTTGTCTGAGGTTG+AGG 0.342271 1_4:-75363874 Msa0185280:CDS
TATTGTGGTATTTGGGGTCC+TGG 0.350442 1_4:-75360149 Msa0185280:three_prime_UTR
GTAGCTGGCTTGGCCGGCTT+CGG 0.350876 1_4:+75360432 None:intergenic
TTGGATGCAGCCACTATTGC+AGG 0.354110 1_4:-75364178 Msa0185280:CDS
ACCGATTACCTTCTGTTTCT+CGG 0.363019 1_4:+75360806 None:intergenic
CTTTAAAGTACGAGAGTTCC+AGG 0.363318 1_4:-75363498 Msa0185280:intron
CCCTTCACACGCTCCAAGAT+TGG 0.367345 1_4:+75363722 None:intergenic
TCAACCTAGAACACTAGATT+TGG 0.367511 1_4:+75360115 None:intergenic
TCTTTATAGCGCTCTTCAAT+TGG 0.369111 1_4:+75360933 None:intergenic
ATGCCACACAAAAGCAAAAC+TGG 0.371249 1_4:+75360026 None:intergenic
AGTGGAGTGCTTGTGTTATA+CGG 0.373338 1_4:-75359902 Msa0185280:three_prime_UTR
TCGGATTCTCCAGACATCTC+TGG 0.380505 1_4:-75365904 Msa0185280:five_prime_UTR
CAACGGTTTATTGGGACTGC+TGG 0.381438 1_4:-75364514 Msa0185280:CDS
TCTTTGGTCCCAGAGATGTC+TGG 0.381456 1_4:+75365895 None:intergenic
TCACCAAAACACACAATTGC+TGG 0.381576 1_4:+75364541 None:intergenic
ATGTCAATGTGATCAAATTT+GGG 0.382316 1_4:+75360831 None:intergenic
CTTCTCGATCGCGCTTCGTT+AGG 0.392828 1_4:-75365644 Msa0185280:intron
TAGGTATGGGATTTCCCTTT+GGG 0.397756 1_4:+75362613 None:intergenic
CTAGGTATGGGATTTCCCTT+TGG 0.399508 1_4:+75362612 None:intergenic
AATTTATAAGACTGATCTTC+CGG 0.400012 1_4:-75364101 Msa0185280:CDS
ATGGTTGAGGTGGTTGGTTC+CGG 0.401837 1_4:-75363647 Msa0185280:CDS
GTTGGTGTTTCTGGAGTAGC+TGG 0.401844 1_4:+75360417 None:intergenic
TCTGATTTGTCAGTCTCCAT+TGG 0.404976 1_4:+75360267 None:intergenic
GCTGTTGTTGATTGCTGCAT+TGG 0.405028 1_4:-75364241 Msa0185280:CDS
TTATTGTCTGATTCGCTGTC+TGG 0.407773 1_4:+75362654 None:intergenic
TCCTGAGGAGGTGGAGTTGT+TGG 0.408657 1_4:+75360399 None:intergenic
CGTCGACAACTCGTTCAAAC+TGG 0.412152 1_4:-75365868 Msa0185280:five_prime_UTR
TAAATTTGGCAGCAAAATGA+TGG 0.412474 1_4:+75363930 None:intergenic
TTCCTTCCACCAGTACAAAA+TGG 0.415244 1_4:+75360081 None:intergenic
TCACAGCTACTCAAGTCTTT+GGG 0.416881 1_4:-75364312 Msa0185280:CDS
CGCAAGTTTATTTAATATTG+TGG 0.420892 1_4:-75360164 Msa0185280:three_prime_UTR
CAGTACCTTGGAACTAGGTA+TGG 0.424246 1_4:+75362599 None:intergenic
CCATTCGTACGATAGGTCCC+TGG 0.429701 1_4:-75363981 Msa0185280:CDS
AGATGTTTCTAGAAGCAATT+CGG 0.432243 1_4:-75365923 None:intergenic
ACTCCAGCAATTGTGTGTTT+TGG 0.432697 1_4:-75364544 Msa0185280:CDS
GGTGGTGCAGCAGCATCAGC+AGG 0.435571 1_4:+75362078 None:intergenic
AACGGTTTATTGGGACTGCT+GGG 0.440788 1_4:-75364513 Msa0185280:CDS
TCGATGTTCAGAGGTGCCTC+TGG 0.441984 1_4:+75363812 None:intergenic
GATAGCTGGTACACGAGAAC+CGG 0.449422 1_4:+75363628 None:intergenic
GGAGCGTGTGAAGGGACCTT+TGG 0.450308 1_4:-75363714 Msa0185280:CDS
AATCAAGTCCCACCAGTCTC+TGG 0.450550 1_4:-75360294 Msa0185280:CDS
CAGGGCTTGTCTGAGGTTGA+GGG 0.453127 1_4:-75363873 Msa0185280:CDS
TCCATTGGTTCGCCAGAGAC+TGG 0.454103 1_4:+75360282 None:intergenic
AACACAAGCACTCCACTAAC+CGG 0.458234 1_4:+75359908 None:intergenic
CAAGCTGGAAGAGCTCAAAA+AGG 0.461479 1_4:-75361203 Msa0185280:intron
TGCTGAAGAAAATGCTAAGA+TGG 0.464324 1_4:-75362115 Msa0185280:CDS
TCCAATCTTGGAGCGTGTGA+AGG 0.464412 1_4:-75363723 Msa0185280:CDS
AATGTTGCCTTCGTTGATGT+TGG 0.464859 1_4:-75364064 Msa0185280:CDS
ACCAACAACTCCACCTCCTC+AGG 0.467608 1_4:-75360400 Msa0185280:CDS
CCATAAACTACCTCTGCAAC+AGG 0.467626 1_4:+75361563 None:intergenic
ATGTTGCCTTCGTTGATGTT+GGG 0.468175 1_4:-75364063 Msa0185280:CDS
TTGATGTTTACCAGAATGCC+AGG 0.468308 1_4:-75363892 Msa0185280:CDS
TCTTCAGAGGAGATCTGTAT+TGG 0.468618 1_4:-75364197 Msa0185280:CDS
GTACTGACATTCTTCAGAAC+AGG 0.469762 1_4:-75362582 Msa0185280:CDS
AACTTCAGGAGGTGGAAGAT+TGG 0.469887 1_4:-75361270 Msa0185280:CDS
TCGCAGATAAAGAGATTGAT+TGG 0.470501 1_4:-75364454 Msa0185280:CDS
AGGAGATAAGCCTGTGCAAA+TGG 0.471804 1_4:-75361968 Msa0185280:CDS
TGCTCACCTTCCTGAGGAGG+TGG 0.475053 1_4:+75360390 None:intergenic
ACACTGCAATGCAGCACCCC+TGG 0.479004 1_4:+75363538 None:intergenic
CACGAAAGAGAAACTGAAAA+GGG 0.481256 1_4:+75362699 None:intergenic
CCACGAAAGAGAAACTGAAA+AGG 0.483023 1_4:+75362698 None:intergenic
GAGTAGTTTGGGGACTGGAA+TGG 0.483969 1_4:+75365769 None:intergenic
CTGATCTTCCGGAAAATGAA+TGG 0.484443 1_4:-75364090 Msa0185280:CDS
TGAAGATCGGTAAAGTAGAC+TGG 0.487938 1_4:+75364214 None:intergenic
CGAGACAACAGCAACTGCCT+TGG 0.492233 1_4:-75364131 Msa0185280:CDS
ACGATAGGTCCCTGGGTGGT+AGG 0.492416 1_4:-75363973 Msa0185280:CDS
AGTGCTATCAGTCCGGTTAG+TGG 0.493339 1_4:-75359920 Msa0185280:intron
CCCTGCATTGTCATTACTAC+CGG 0.496598 1_4:+75360326 None:intergenic
GTATCTGTATCCATTTGCAC+AGG 0.502980 1_4:+75361958 None:intergenic
TCTGGAGTAGCTGGCTTGGC+CGG 0.504054 1_4:+75360426 None:intergenic
TTGATTCATGCACGATATCT+GGG 0.504774 1_4:-75364349 Msa0185280:CDS
AATGTGTAGAAGCTGAGAAT+TGG 0.505212 1_4:-75360699 Msa0185280:CDS
CGGATTCTCCAGACATCTCT+GGG 0.505714 1_4:-75365903 Msa0185280:five_prime_UTR
ACCAGTCTCTGGCGAACCAA+TGG 0.505944 1_4:-75360283 Msa0185280:CDS
GAAAATGGCATGCCTGAGGC+AGG 0.507943 1_4:-75361988 Msa0185280:CDS
CTGAAGCAACGACAAACTCT+TGG 0.510316 1_4:+75361314 None:intergenic
TCTGCAAGTGCCTTCTCCAA+AGG 0.510923 1_4:+75363698 None:intergenic
CGATAGGTCCCTGGGTGGTA+GGG 0.511133 1_4:-75363972 Msa0185280:CDS
ATCCACATGGTTGAGGTGGT+TGG 0.513899 1_4:-75363653 Msa0185280:CDS
GAGAAGGCACTTGCAGAAGC+AGG 0.514343 1_4:-75363692 Msa0185280:CDS
AACGAAGCGCGATCGAGAAG+AGG 0.514547 1_4:+75365647 None:intergenic
ATTTAATATTGTGGTATTTG+GGG 0.515602 1_4:-75360155 Msa0185280:three_prime_UTR
GACGAAACCAAAACCGAAGC+CGG 0.516011 1_4:-75360445 Msa0185280:CDS
TGTAGATCATATTATCAGTC+CGG 0.517025 1_4:-75359950 Msa0185280:intron
TGTTTCTGGAGTAGCTGGCT+TGG 0.519497 1_4:+75360422 None:intergenic
AACTCTCGTACTTTAAAGGT+TGG 0.520643 1_4:+75363503 None:intergenic
TGCTGATCCGGAACTGCAGA+GGG 0.522518 1_4:-75364422 Msa0185280:CDS
TGTAGAGAAGGAGTTTGAAA+TGG 0.522603 1_4:-75361510 Msa0185280:CDS
ATATCAGCTGACAAGAGGAC+GGG 0.523481 1_4:+75360628 None:intergenic
AAGGTAACTGCTGATACCCC+TGG 0.526128 1_4:-75362015 Msa0185280:CDS
GCTATAAAGAGTACTCAGAC+AGG 0.526304 1_4:-75360920 Msa0185280:CDS
AGGTGTATACAATGCCAAGC+TGG 0.526816 1_4:-75361218 Msa0185280:CDS
AGATATCGTGCATGAATCAA+TGG 0.527139 1_4:+75364352 None:intergenic
ACAGGCTTATCTCCTGCCTC+AGG 0.527960 1_4:+75361976 None:intergenic
CCTCAACCTCAGACAAGCCC+TGG 0.529406 1_4:+75363874 None:intergenic
TGAATCAATGGATATCCATC+AGG 0.529513 1_4:+75364364 None:intergenic
ACAACCAGAACAGCAACCTC+AGG 0.530164 1_4:-75360361 Msa0185280:CDS
TATTACCAAACTTCAGGAGG+TGG 0.534898 1_4:-75361278 Msa0185280:CDS
TTGCCGTTGCAAGGCAGAGA+GGG 0.535504 1_4:-75364603 Msa0185280:CDS
GCTGTATTGTTGCCGTTGCA+AGG 0.536790 1_4:-75364612 Msa0185280:CDS
CAGGGACCTATCGTACGAAT+GGG 0.536830 1_4:+75363982 None:intergenic
GCCGGTAGTAATGACAATGC+AGG 0.537493 1_4:-75360327 Msa0185280:CDS
TGAGAATATCCACATGGTTG+AGG 0.538524 1_4:-75363660 Msa0185280:CDS
TTCTTATATCAGCTGACAAG+AGG 0.539505 1_4:+75360623 None:intergenic
ACTTGCAGAAGCAGGTCTTA+CGG 0.542448 1_4:-75363684 Msa0185280:CDS
ATGCTAGCGAGTGTGTTGCC+AGG 0.542997 1_4:-75363556 Msa0185280:CDS
TGCTGCTCACCTTCCTGAGG+AGG 0.545333 1_4:+75360387 None:intergenic
TGTTCAGAAGGCTGTAGAGA+AGG 0.546797 1_4:-75361522 Msa0185280:CDS
ACATCGTTGTCATTGGAGCT+AGG 0.547123 1_4:+75362054 None:intergenic
TGTTAATATGCAAGATGCTA+AGG 0.547914 1_4:-75362034 Msa0185280:CDS
TTGTCATTGGAGCTAGGAGG+TGG 0.548536 1_4:+75362060 None:intergenic
TGCTAGCGAGTGTGTTGCCA+GGG 0.549345 1_4:-75363555 Msa0185280:CDS
CCAGGGACCTATCGTACGAA+TGG 0.550358 1_4:+75363981 None:intergenic
ACATTGTACATCAACAGAAA+AGG 0.552110 1_4:+75362557 None:intergenic
CGGGTGCAAACCTGCAATAG+TGG 0.553198 1_4:+75364168 None:intergenic
TGCTTGTGAGAAGCTGAAGA+AGG 0.553233 1_4:-75363849 Msa0185280:CDS
CGATCGAGAAGAGGAAGAGA+GGG 0.553515 1_4:+75365656 None:intergenic
GATATGTTAGAGCTCTCTGT+TGG 0.554184 1_4:-75360194 Msa0185280:three_prime_UTR
CCGGTAGTAATGACAATGCA+GGG 0.554344 1_4:-75360326 Msa0185280:CDS
TACCTCTGCAACAGGAATGT+TGG 0.554739 1_4:+75361571 None:intergenic
CGAGTGCTTAATGGATGAGA+AGG 0.556611 1_4:-75363792 Msa0185280:CDS
AATTGCTGGAGTTTCACGCT+TGG 0.556631 1_4:+75364555 None:intergenic
GTCAAAATCCCTACCACCCA+GGG 0.558316 1_4:+75363964 None:intergenic
TACAGATCTCCTCTGAAGAT+CGG 0.558868 1_4:+75364201 None:intergenic
ATTGGTTCGCCAGAGACTGG+TGG 0.559164 1_4:+75360285 None:intergenic
CATTCGTACGATAGGTCCCT+GGG 0.559216 1_4:-75363980 Msa0185280:CDS
CCAATCTTGGAGCGTGTGAA+GGG 0.559917 1_4:-75363722 Msa0185280:CDS
AGGTAACTGCTGATACCCCT+GGG 0.561414 1_4:-75362014 Msa0185280:CDS
TCTCGTGAATCAAGTGAAGC+GGG 0.567955 1_4:+75364149 None:intergenic
AATGTCAGTACCTTGGAACT+AGG 0.568107 1_4:+75362594 None:intergenic
AATGTCACTGAAGGACCTGA+TGG 0.568196 1_4:-75364379 Msa0185280:CDS
AATGGATGAGAAGGATGTGA+GGG 0.568291 1_4:-75363783 Msa0185280:CDS
TGGAATTGTGTCTGTTGAGT+CGG 0.568343 1_4:-75362345 Msa0185280:CDS
AGCTGACAAGAGGACGGGGT+TGG 0.571644 1_4:+75360633 None:intergenic
CGCTAACGGAACTTATGAGA+AGG 0.575524 1_4:+75365736 None:intergenic
GTTTGTCGTTGCTTCAGAGA+GGG 0.575619 1_4:-75361308 Msa0185280:CDS
CGTCAAAATCCCTACCACCC+AGG 0.577960 1_4:+75363963 None:intergenic
CTAGCATTCATAGTCCGCCT+AGG 0.579676 1_4:+75363572 None:intergenic
TGCTGCTGCTCACCTTCCTG+AGG 0.582832 1_4:+75360384 None:intergenic
AATGACAATGCAGGGGACAA+TGG 0.583306 1_4:-75360318 Msa0185280:CDS
TGGAGCATTCAATTATAATG+AGG 0.583718 1_4:+75360046 None:intergenic
ATCACTCTTTCGTCACTCCA+AGG 0.584400 1_4:+75359840 None:intergenic
GCGATCGAGAAGAGGAAGAG+AGG 0.587204 1_4:+75365655 None:intergenic
AGAGGTAGTTTATGGTGCAA+TGG 0.587607 1_4:-75361555 Msa0185280:CDS
CCTCAGGAGGATGCTAATGC+CGG 0.588845 1_4:-75360345 Msa0185280:CDS
CTTATAAATTCCATAAGCCA+AGG 0.590353 1_4:+75364114 None:intergenic
TCTGAAGAATGTCAGTACCT+TGG 0.590657 1_4:+75362587 None:intergenic
TACTGTCCCATTCGTACGAT+AGG 0.595664 1_4:-75363988 Msa0185280:CDS
TATAAAGAGTACTCAGACAG+GGG 0.597749 1_4:-75360918 Msa0185280:CDS
CTATAAAGAGTACTCAGACA+GGG 0.603983 1_4:-75360919 Msa0185280:CDS
TTGGTTCGCCAGAGACTGGT+GGG 0.606360 1_4:+75360286 None:intergenic
ATGGATGAGAAGGATGTGAG+GGG 0.606368 1_4:-75363782 Msa0185280:CDS
AGTACCTTGGAACTAGGTAT+GGG 0.607990 1_4:+75362600 None:intergenic
TTGCTGATCCGGAACTGCAG+AGG 0.608780 1_4:-75364423 Msa0185280:CDS
CCTAGAACACTAGATTTGGA+AGG 0.608843 1_4:+75360119 None:intergenic
ACGGTTTATTGGGACTGCTG+GGG 0.609490 1_4:-75364512 Msa0185280:CDS
AAATCCCATACCTAGTTCCA+AGG 0.610603 1_4:-75362604 Msa0185280:CDS
TATATCAGCTGACAAGAGGA+CGG 0.612018 1_4:+75360627 None:intergenic
GGCTCTGCAAGATCGAGTGA+TGG 0.612553 1_4:-75361489 Msa0185280:CDS
CAACCAAAGATGAGTGTGGT+CGG 0.612927 1_4:-75364655 Msa0185280:exon
GACCAACATTCCTGTTGCAG+AGG 0.615018 1_4:-75361573 Msa0185280:CDS
TGTGAAGGGACCTTTGGAGA+AGG 0.615609 1_4:-75363708 Msa0185280:CDS
TCTACTTTACCGATCTTCAG+AGG 0.615790 1_4:-75364210 Msa0185280:CDS
GAGAGCTTACGAAACGCTAA+CGG 0.618120 1_4:+75365722 None:intergenic
ATTTATTACCAAACTTCAGG+AGG 0.618570 1_4:-75361281 Msa0185280:CDS
TCTGCAAGATCGAGTGATGG+AGG 0.622778 1_4:-75361486 Msa0185280:CDS
GGCAACTGTTGATGTTCAGA+AGG 0.624402 1_4:-75361534 Msa0185280:CDS
ATTTCCCTTTGGGAAAACAA+TGG 0.628075 1_4:+75362623 None:intergenic
ACCAGAACAGCAACCTCAGG+AGG 0.628863 1_4:-75360358 Msa0185280:CDS
CTTTGAAGAGGAAGAAACTG+AGG 0.629490 1_4:-75362157 Msa0185280:CDS
AGCATTCAATTATAATGAGG+AGG 0.629615 1_4:+75360049 None:intergenic
GAAGATTGGCTATACGAGGA+TGG 0.629632 1_4:-75361256 Msa0185280:CDS
GTCTCGTGAATCAAGTGAAG+CGG 0.632195 1_4:+75364148 None:intergenic
ATTAAGCACTCGATGTTCAG+AGG 0.634047 1_4:+75363803 None:intergenic
AGAATGCCAGGGCTTGTCTG+AGG 0.639873 1_4:-75363880 Msa0185280:CDS
ACAACTCCACCTCCTCAGGA+AGG 0.644838 1_4:-75360396 Msa0185280:CDS
GGCTGAAAATGGCATGCCTG+AGG 0.650058 1_4:-75361992 Msa0185280:CDS
AATCCCTCTCTGCCTTGCAA+CGG 0.651598 1_4:+75364600 None:intergenic
AACCAACCACCTCAACCATG+TGG 0.653097 1_4:+75363651 None:intergenic
TATCAGCTGACAAGAGGACG+GGG 0.657591 1_4:+75360629 None:intergenic
TGACATTGCCGAGAAACAGA+AGG 0.657830 1_4:-75360814 Msa0185280:intron
AGCATGCCCAACATCAACGA+AGG 0.660529 1_4:+75364057 None:intergenic
GATTTGGAAGGAAGAAAACC+AGG 0.665162 1_4:+75360131 None:intergenic
TGATGTTTACCAGAATGCCA+GGG 0.666077 1_4:-75363891 Msa0185280:CDS
GTTGCCGTTGCAAGGCAGAG+AGG 0.666168 1_4:-75364604 Msa0185280:CDS
TAATGGATGAGAAGGATGTG+AGG 0.670561 1_4:-75363784 Msa0185280:CDS
AGTTTGTCGTTGCTTCAGAG+AGG 0.671949 1_4:-75361309 Msa0185280:CDS
ACGAAAGAGAAACTGAAAAG+GGG 0.674521 1_4:+75362700 None:intergenic
GAATATCCACATGGTTGAGG+TGG 0.679068 1_4:-75363657 Msa0185280:CDS
GGGACTGGAATGGAATTTCG+GGG 0.679760 1_4:+75365779 None:intergenic
GCAAATGGATACAGATACCA+AGG 0.680089 1_4:-75361953 Msa0185280:intron
CCGGCATTAGCATCCTCCTG+AGG 0.684481 1_4:+75360345 None:intergenic
TACGGTTGAGAATATCCACA+TGG 0.684683 1_4:-75363666 Msa0185280:CDS
GTGCCTCTGGATTTGCACTG+AGG 0.688247 1_4:+75363825 None:intergenic
TCGTTGTCATTGGAGCTAGG+AGG 0.689793 1_4:+75362057 None:intergenic
CGGTAGTAATGACAATGCAG+GGG 0.692208 1_4:-75360325 Msa0185280:CDS
GGTCCTCAGTGCAAATCCAG+AGG 0.694749 1_4:-75363828 Msa0185280:CDS
CGAAAGAGTGATAAATGCGG+TGG 0.697276 1_4:-75359829 None:intergenic
GGTGGAAGATTGGCTATACG+AGG 0.701809 1_4:-75361260 Msa0185280:CDS
GATGGTGAAGACGAAACCAA+AGG 0.702732 1_4:-75361238 Msa0185280:CDS
AGATCAACCAAAGATGAGTG+TGG 0.702981 1_4:-75364659 Msa0185280:exon
ACTGACAAATCAGAGAACAC+AGG 0.711435 1_4:-75360258 Msa0185280:CDS
GCTAGCGAGTGTGTTGCCAG+GGG 0.718198 1_4:-75363554 Msa0185280:CDS
TCGTACGATAGGTCCCTGGG+TGG 0.718316 1_4:-75363977 Msa0185280:CDS
TGACGAAAGAGTGATAAATG+CGG 0.756075 1_4:-75359832 Msa0185280:three_prime_UTR
GGTAACTGCTGATACCCCTG+GGG 0.770509 1_4:-75362013 Msa0185280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTT+TGG - chr1_4:75362326-75362345 Msa0185280:intron 0.0%
!!! TTTTTTTTTTTTTTTTTTTT+GGG - chr1_4:75362326-75362345 Msa0185280:intron 0.0%
!!! TTTTTTTTTTTTTTTTTTGG+GGG - chr1_4:75362330-75362349 Msa0185280:intron 10.0%
!! TTAAAGAAAAAATAATACTA+CGG + chr1_4:75362570-75362589 None:intergenic 10.0%
!!! GTTTTCTATTTAAATTTTTT+AGG - chr1_4:75365010-75365029 Msa0185280:intron 10.0%
!!! TTTTTTTTTTTTTTTTTGGG+GGG - chr1_4:75362331-75362350 Msa0185280:intron 15.0%
!! TGTATATAGTATTAATTGAA+GGG + chr1_4:75362540-75362559 None:intergenic 15.0%
!! TCAATTTGTAAATATAACAA+GGG + chr1_4:75362871-75362890 None:intergenic 15.0%
!! CAAACTAAACAAAAAAAATT+AGG + chr1_4:75365514-75365533 None:intergenic 15.0%
!! TTATTTAATATTGTGGTATT+TGG - chr1_4:75365584-75365603 Msa0185280:intron 15.0%
!! TATTTAATATTGTGGTATTT+GGG - chr1_4:75365585-75365604 Msa0185280:intron 15.0%
!!! TTTTTTTTTTTTTTTTGGGG+GGG - chr1_4:75362332-75362351 Msa0185280:intron 20.0%
!! GTGTATATAGTATTAATTGA+AGG + chr1_4:75362541-75362560 None:intergenic 20.0%
!! AAATTATCCTAATCAACTAT+TGG + chr1_4:75362604-75362623 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG - chr1_4:75362603-75362622 Msa0185280:CDS 20.0%
!! TACAAATAGAAATATTGCAT+TGG + chr1_4:75362767-75362786 None:intergenic 20.0%
!! TATGACTGTAAATATAACAA+GGG + chr1_4:75362829-75362848 None:intergenic 20.0%
!! TTATGACTGTAAATATAACA+AGG + chr1_4:75362830-75362849 None:intergenic 20.0%
!! TTGTTATATTTACAGTCATA+AGG - chr1_4:75362829-75362848 Msa0185280:intron 20.0%
!! GTCAATTTGTAAATATAACA+AGG + chr1_4:75362872-75362891 None:intergenic 20.0%
!!! AATAAATTGTCCATTTTTTG+CGG - chr1_4:75362928-75362947 Msa0185280:intron 20.0%
!!! TTTACAATATTTTTCCCTAT+TGG - chr1_4:75363277-75363296 Msa0185280:intron 20.0%
!!! TTGTTTTCTTATTTCTATTG+TGG - chr1_4:75363924-75363943 Msa0185280:CDS 20.0%
!!! TTTTCAGACAAACTTATATT+TGG - chr1_4:75363973-75363992 Msa0185280:CDS 20.0%
!!! TTTTTCTTGTTTCTTTCAAA+TGG - chr1_4:75364350-75364369 Msa0185280:CDS 20.0%
!!! TTTTTTTAATGATTGTAGCA+AGG - chr1_4:75364781-75364800 Msa0185280:intron 20.0%
!!! TTTTTTAATGATTGTAGCAA+GGG - chr1_4:75364782-75364801 Msa0185280:intron 20.0%
!! CTAATTATGTTATCTACAAT+AGG - chr1_4:75365256-75365275 Msa0185280:intron 20.0%
!! ATTTAATATTGTGGTATTTG+GGG - chr1_4:75365586-75365605 Msa0185280:intron 20.0%
!! ACTTTCTTTTTATACGATCT+TGG + chr1_4:75359916-75359935 None:intergenic 25.0%
! ACTAATACAACACAAGAATA+TGG + chr1_4:75360240-75360259 None:intergenic 25.0%
!!! TATTTTAATTACTGTGTAGC+TGG - chr1_4:75360388-75360407 Msa0185280:CDS 25.0%
!! ATTGACTCTATTTGAATGAT+TGG - chr1_4:75360576-75360595 Msa0185280:intron 25.0%
!! AAACTAGAATTTGTAGCTTT+TGG - chr1_4:75360638-75360657 Msa0185280:CDS 25.0%
!! AGTGGATTTAACATTATTCA+GGG + chr1_4:75360685-75360704 None:intergenic 25.0%
!! AAGTGGATTTAACATTATTC+AGG + chr1_4:75360686-75360705 None:intergenic 25.0%
! AGAATGTATTTATGCAAAAG+TGG + chr1_4:75360703-75360722 None:intergenic 25.0%
!!! TCTAGATATTGATTTTGTGT+TGG - chr1_4:75361059-75361078 Msa0185280:intron 25.0%
! AATTTATAAGACTGATCTTC+CGG - chr1_4:75361640-75361659 Msa0185280:intron 25.0%
! CTTATATTCCTCCTTAAATT+TGG + chr1_4:75361828-75361847 None:intergenic 25.0%
!!! TTTTTTTTTTTTTTTGGGGG+GGG - chr1_4:75362333-75362352 Msa0185280:intron 25.0%
!!! AAACGACACTCATTTTAAAA+CGG + chr1_4:75362439-75362458 None:intergenic 25.0%
! AAACAAACCAATAGTTGATT+AGG - chr1_4:75362594-75362613 Msa0185280:CDS 25.0%
!! TTCAAAATGAATGTCGTTTA+AGG + chr1_4:75362686-75362705 None:intergenic 25.0%
!!! AAACGACATTCATTTTGAAA+CGG - chr1_4:75362687-75362706 Msa0185280:CDS 25.0%
! AGAAATATTGCATTGGAAAA+TGG + chr1_4:75362760-75362779 None:intergenic 25.0%
! TAACAATTCTCTGCAAAAAA+TGG + chr1_4:75362894-75362913 None:intergenic 25.0%
! TTGTTTACTTCATTATGAGA+AGG - chr1_4:75363005-75363024 Msa0185280:intron 25.0%
!! AGTAAGTTTTTGTATGCTTA+GGG - chr1_4:75363423-75363442 Msa0185280:intron 25.0%
!!! TTTCTTATTTCTATTGTGGA+AGG - chr1_4:75363928-75363947 Msa0185280:CDS 25.0%
! TGAATTTATTACCAAACTTC+AGG - chr1_4:75364457-75364476 Msa0185280:CDS 25.0%
!! AACACTTTTCAAAATGACTA+GGG - chr1_4:75364655-75364674 Msa0185280:exon 25.0%
!! TTTTTAATGATTGTAGCAAG+GGG - chr1_4:75364783-75364802 Msa0185280:intron 25.0%
! ATGTCAATGTGATCAAATTT+GGG + chr1_4:75364913-75364932 None:intergenic 25.0%
! AATGTCAATGTGATCAAATT+TGG + chr1_4:75364914-75364933 None:intergenic 25.0%
!!! TGAATTAGAAGTGTTAGTAT+TGG + chr1_4:75364963-75364982 None:intergenic 25.0%
! TAACACTTCTAATTCATTTC+TGG - chr1_4:75364967-75364986 Msa0185280:intron 25.0%
! TGATATAAGAAAAAAAGCTG+AGG - chr1_4:75365130-75365149 Msa0185280:intron 25.0%
! CGCAAGTTTATTTAATATTG+TGG - chr1_4:75365577-75365596 Msa0185280:intron 25.0%
!! TAGAACTAACAATTGTGTTT+TGG - chr1_4:75365738-75365757 Msa0185280:five_prime_UTR 25.0%
!! AGAACTAACAATTGTGTTTT+GGG - chr1_4:75365739-75365758 Msa0185280:five_prime_UTR 25.0%
!!! TTCGGGGTTTGTTTTATTTA+TGG + chr1_4:75359949-75359968 None:intergenic 30.0%
!! AGAAACTTTTGAGTAGTTTG+GGG + chr1_4:75359985-75360004 None:intergenic 30.0%
!! GAGAAACTTTTGAGTAGTTT+GGG + chr1_4:75359986-75360005 None:intergenic 30.0%
TGGAACAATCTGAAGAAATA+TGG + chr1_4:75360051-75360070 None:intergenic 30.0%
GTGATAGATCTATGCATTAT+CGG - chr1_4:75360185-75360204 Msa0185280:three_prime_UTR 30.0%
AATACAACACAAGAATATGG+AGG + chr1_4:75360237-75360256 None:intergenic 30.0%
! ATTTAGTGTTGAGATGTTTC+TGG - chr1_4:75360322-75360341 Msa0185280:CDS 30.0%
! GCTGTTGTTATTAAGTTGTT+AGG - chr1_4:75360358-75360377 Msa0185280:CDS 30.0%
TTGTTTGGCTGTTATATGTA+TGG - chr1_4:75360445-75360464 Msa0185280:CDS 30.0%
ACTCTATTTGAATGATTGGA+AGG - chr1_4:75360580-75360599 Msa0185280:intron 30.0%
! CTGTTCTCTGTTGATTATTA+TGG - chr1_4:75360904-75360923 Msa0185280:CDS 30.0%
TTCTTTGCTTTACCATGAAT+TGG - chr1_4:75360983-75361002 Msa0185280:intron 30.0%
AAATCACAAAGTCCAATTCA+TGG + chr1_4:75360998-75361017 None:intergenic 30.0%
! ATCTGCGAGATTGAATTTTT+CGG + chr1_4:75361275-75361294 None:intergenic 30.0%
!! TGGTAAAAAATTTGCTGATC+CGG - chr1_4:75361307-75361326 Msa0185280:CDS 30.0%
CTTATAAATTCCATAAGCCA+AGG + chr1_4:75361630-75361649 None:intergenic 30.0%
TAAATTTGGCAGCAAAATGA+TGG + chr1_4:75361814-75361833 None:intergenic 30.0%
! TCATTTTGCTGCCAAATTTA+AGG - chr1_4:75361814-75361833 Msa0185280:intron 30.0%
!!! GTCAATATTTTGTTGATAGC+TGG + chr1_4:75362130-75362149 None:intergenic 30.0%
ATTGACAGAGTTCTTCAAAA+AGG - chr1_4:75362144-75362163 Msa0185280:CDS 30.0%
TACAGCATAGAAAATTTACC+TGG + chr1_4:75362264-75362283 None:intergenic 30.0%
! ACCAGTATGTTCTGTATTTT+TGG - chr1_4:75362290-75362309 Msa0185280:intron 30.0%
!!! TTTTTTTTTTTTTTGGGGGG+GGG - chr1_4:75362334-75362353 Msa0185280:intron 30.0%
TCTTCTTAACCAATGTCATA+AGG - chr1_4:75362787-75362806 Msa0185280:intron 30.0%
ACATTGTACATCAACAGAAA+AGG + chr1_4:75363187-75363206 None:intergenic 30.0%
AAAGTTCGTTTGAATCTTCA+TGG - chr1_4:75363376-75363395 Msa0185280:intron 30.0%
! CAGTAAGTTTTTGTATGCTT+AGG - chr1_4:75363422-75363441 Msa0185280:intron 30.0%
TTACCACAATGATTTCACAT+GGG + chr1_4:75363497-75363516 None:intergenic 30.0%
TTTACCACAATGATTTCACA+TGG + chr1_4:75363498-75363517 None:intergenic 30.0%
!! TTTTGTTAAGCTCTTTGAAG+AGG - chr1_4:75363572-75363591 Msa0185280:CDS 30.0%
! ATTTTCTTCAGCAGATTCTT+TGG + chr1_4:75363619-75363638 None:intergenic 30.0%
CATATTAACATCGTTGTCAT+TGG + chr1_4:75363697-75363716 None:intergenic 30.0%
TGTTAATATGCAAGATGCTA+AGG - chr1_4:75363707-75363726 Msa0185280:CDS 30.0%
GTGATTTATGAAGTTCTTGT+TGG - chr1_4:75364042-75364061 Msa0185280:CDS 30.0%
!!! GTCTTCTTCACTTTTTTCTT+TGG + chr1_4:75364151-75364170 None:intergenic 30.0%
TGTCTATGACATGAGAAATA+AGG - chr1_4:75364312-75364331 Msa0185280:CDS 30.0%
ATGACATGAGAAATAAGGTT+AGG - chr1_4:75364317-75364336 Msa0185280:CDS 30.0%
ATTTATTACCAAACTTCAGG+AGG - chr1_4:75364460-75364479 Msa0185280:CDS 30.0%
!! AAAGTGTTGATAGCTATCAA+AGG + chr1_4:75364643-75364662 None:intergenic 30.0%
! CAACACTTTTCAAAATGACT+AGG - chr1_4:75364654-75364673 Msa0185280:exon 30.0%
! ACACTTTTCAAAATGACTAG+GGG - chr1_4:75364656-75364675 Msa0185280:exon 30.0%
TGCAAAAACTATAACTACAG+TGG + chr1_4:75364739-75364758 None:intergenic 30.0%
! AGGTATATGTTGTAGCTTTA+TGG - chr1_4:75365161-75365180 Msa0185280:intron 30.0%
TTTATGGATCGAGACTATTA+TGG - chr1_4:75365177-75365196 Msa0185280:intron 30.0%
! ATTTGTGTACCATTTTGTAC+TGG - chr1_4:75365651-75365670 Msa0185280:five_prime_UTR 30.0%
AGCATTCAATTATAATGAGG+AGG + chr1_4:75365695-75365714 None:intergenic 30.0%
! TGGAGCATTCAATTATAATG+AGG + chr1_4:75365698-75365717 None:intergenic 30.0%
! GAACTAACAATTGTGTTTTG+GGG - chr1_4:75365740-75365759 Msa0185280:five_prime_UTR 30.0%
!! AACTAACAATTGTGTTTTGG+GGG - chr1_4:75365741-75365760 Msa0185280:five_prime_UTR 30.0%
TGTAGATCATATTATCAGTC+CGG - chr1_4:75365791-75365810 Msa0185280:five_prime_UTR 30.0%
! ACGGATCATATGATATTTTC+TGG - chr1_4:75365858-75365877 Msa0185280:five_prime_UTR 30.0%
!! GGAGAAACTTTTGAGTAGTT+TGG + chr1_4:75359987-75360006 None:intergenic 35.0%
!! AGATGACGTTGATTCTTGTT+TGG - chr1_4:75360430-75360449 Msa0185280:CDS 35.0%
CTGTTATATGTATGGTTGCA+CGG - chr1_4:75360453-75360472 Msa0185280:CDS 35.0%
TGTTATATGTATGGTTGCAC+GGG - chr1_4:75360454-75360473 Msa0185280:CDS 35.0%
!!! TGTGTTTTGGTGACAAACAA+CGG - chr1_4:75361210-75361229 Msa0185280:CDS 35.0%
GTGACAAACAACGGTTTATT+GGG - chr1_4:75361219-75361238 Msa0185280:CDS 35.0%
TCGCAGATAAAGAGATTGAT+TGG - chr1_4:75361287-75361306 Msa0185280:CDS 35.0%
! TTGCCTTTTAATGTCACTGA+AGG - chr1_4:75361353-75361372 Msa0185280:intron 35.0%
TGAATCAATGGATATCCATC+AGG + chr1_4:75361380-75361399 None:intergenic 35.0%
AGATATCGTGCATGAATCAA+TGG + chr1_4:75361392-75361411 None:intergenic 35.0%
! ATTGATTCATGCACGATATC+TGG - chr1_4:75361391-75361410 Msa0185280:intron 35.0%
TTGATTCATGCACGATATCT+GGG - chr1_4:75361392-75361411 Msa0185280:intron 35.0%
AGCTCAGAAAAATCTGAATG+CGG - chr1_4:75361478-75361497 Msa0185280:CDS 35.0%
! ACATTCAGCCATTCATTTTC+CGG + chr1_4:75361662-75361681 None:intergenic 35.0%
TTGCATTGCCGGATTTAAAA+AGG - chr1_4:75361718-75361737 Msa0185280:intron 35.0%
TGCATTGCCGGATTTAAAAA+GGG - chr1_4:75361719-75361738 Msa0185280:intron 35.0%
! TTTTGCTGCCAAATTTAAGG+AGG - chr1_4:75361817-75361836 Msa0185280:intron 35.0%
AGTTCTTCAAAAAGGAACCT+AGG - chr1_4:75362152-75362171 Msa0185280:CDS 35.0%
! AACTCTCGTACTTTAAAGGT+TGG + chr1_4:75362241-75362260 None:intergenic 35.0%
GCCAAAAATACAGAACATAC+TGG + chr1_4:75362294-75362313 None:intergenic 35.0%
!!! TTTTTTTTTTTTTGGGGGGG+GGG - chr1_4:75362335-75362354 Msa0185280:intron 35.0%
!!! GACACTCATTTTAAAACGGA+GGG + chr1_4:75362435-75362454 None:intergenic 35.0%
!!! GACATTCATTTTGAAACGGA+GGG - chr1_4:75362691-75362710 Msa0185280:CDS 35.0%
!! AAAGAGTGTCCTTATGACAT+TGG + chr1_4:75362799-75362818 None:intergenic 35.0%
ACGAAAGAGAAACTGAAAAG+GGG + chr1_4:75363044-75363063 None:intergenic 35.0%
CACGAAAGAGAAACTGAAAA+GGG + chr1_4:75363045-75363064 None:intergenic 35.0%
! AAGTACCATTGTTTTCCCAA+AGG - chr1_4:75363113-75363132 Msa0185280:intron 35.0%
! AGTACCATTGTTTTCCCAAA+GGG - chr1_4:75363114-75363133 Msa0185280:intron 35.0%
! ATTTCCCTTTGGGAAAACAA+TGG + chr1_4:75363121-75363140 None:intergenic 35.0%
!!! GTATATGTGCTGATTTTCGT+AGG + chr1_4:75363228-75363247 None:intergenic 35.0%
!!! CACCGTTTTTAGTTTGGAAA+GGG + chr1_4:75363336-75363355 None:intergenic 35.0%
!!! TCACCGTTTTTAGTTTGGAA+AGG + chr1_4:75363337-75363356 None:intergenic 35.0%
CAAACTAAAAACGGTGACAA+GGG - chr1_4:75363340-75363359 Msa0185280:intron 35.0%
ATGGGCGTAATTAGAAAAGA+AGG + chr1_4:75363479-75363498 None:intergenic 35.0%
CAATTCAATAACAAACGCTC+TGG + chr1_4:75363523-75363542 None:intergenic 35.0%
TGCTGAAGAAAATGCTAAGA+TGG - chr1_4:75363626-75363645 Msa0185280:CDS 35.0%
! GCACACAAAAATGTTTTCCT+TGG + chr1_4:75363820-75363839 None:intergenic 35.0%
TATTTGAGCACACATTGAAG+TGG + chr1_4:75363862-75363881 None:intergenic 35.0%
TTATGCATCAATAAGCTCTC+TGG - chr1_4:75364068-75364087 Msa0185280:CDS 35.0%
TGTAGAGAAGGAGTTTGAAA+TGG - chr1_4:75364231-75364250 Msa0185280:CDS 35.0%
AGACAAGAAAAATGCAGTTG+AGG - chr1_4:75364285-75364304 Msa0185280:CDS 35.0%
CTGGTATAAAAAAGTCTCGA+TGG - chr1_4:75364596-75364615 Msa0185280:CDS 35.0%
GTATAAAAAAGTCTCGATGG+TGG - chr1_4:75364599-75364618 Msa0185280:CDS 35.0%
! TAAACGAAAGTATGTACGCA+TGG + chr1_4:75364684-75364703 None:intergenic 35.0%
GTGTAACAAGCAATATGTGA+AGG - chr1_4:75364712-75364731 Msa0185280:intron 35.0%
TCTTTATAGCGCTCTTCAAT+TGG + chr1_4:75364811-75364830 None:intergenic 35.0%
AATGTGTAGAAGCTGAGAAT+TGG - chr1_4:75365042-75365061 Msa0185280:intron 35.0%
TTCTTATATCAGCTGACAAG+AGG + chr1_4:75365121-75365140 None:intergenic 35.0%
TCAACCTAGAACACTAGATT+TGG + chr1_4:75365629-75365648 None:intergenic 35.0%
! GTGATATCATTTTGCTTCCT+TGG - chr1_4:75365884-75365903 Msa0185280:five_prime_UTR 35.0%
GAAATTGAACAGAGACGGAA+CGG + chr1_4:75360156-75360175 None:intergenic 40.0%
CGCATGAAATTGAACAGAGA+CGG + chr1_4:75360161-75360180 None:intergenic 40.0%
TACTGTGTAGCTGGTGTTTA+TGG - chr1_4:75360397-75360416 Msa0185280:CDS 40.0%
TGACATTGTCCATGCTTCAT+GGG - chr1_4:75360857-75360876 Msa0185280:CDS 40.0%
ATGTAGCCTATCTCACTTAG+TGG - chr1_4:75360940-75360959 Msa0185280:CDS 40.0%
TGTAGCCTATCTCACTTAGT+GGG - chr1_4:75360941-75360960 Msa0185280:CDS 40.0%
CTTATCCCACTAAGTGAGAT+AGG + chr1_4:75360949-75360968 None:intergenic 40.0%
CTATCTCACTTAGTGGGATA+AGG - chr1_4:75360947-75360966 Msa0185280:intron 40.0%
AGATCAACCAAAGATGAGTG+TGG - chr1_4:75361082-75361101 Msa0185280:intron 40.0%
!!! AGTGTGGTCGGTTTTGATTT+CGG - chr1_4:75361098-75361117 Msa0185280:intron 40.0%
! ACTCCAGCAATTGTGTGTTT+TGG - chr1_4:75361197-75361216 Msa0185280:intron 40.0%
TCACCAAAACACACAATTGC+TGG + chr1_4:75361203-75361222 None:intergenic 40.0%
GGTGACAAACAACGGTTTAT+TGG - chr1_4:75361218-75361237 Msa0185280:CDS 40.0%
GGTCCTTCAGTGACATTAAA+AGG + chr1_4:75361359-75361378 None:intergenic 40.0%
TTCACAGCTACTCAAGTCTT+TGG - chr1_4:75361428-75361447 Msa0185280:intron 40.0%
TCACAGCTACTCAAGTCTTT+GGG - chr1_4:75361429-75361448 Msa0185280:intron 40.0%
TGAAGATCGGTAAAGTAGAC+TGG + chr1_4:75361530-75361549 None:intergenic 40.0%
TCTACTTTACCGATCTTCAG+AGG - chr1_4:75361531-75361550 Msa0185280:CDS 40.0%
! TACAGATCTCCTCTGAAGAT+CGG + chr1_4:75361543-75361562 None:intergenic 40.0%
TCTTCAGAGGAGATCTGTAT+TGG - chr1_4:75361544-75361563 Msa0185280:CDS 40.0%
CTGATCTTCCGGAAAATGAA+TGG - chr1_4:75361651-75361670 Msa0185280:intron 40.0%
AATGTTGCCTTCGTTGATGT+TGG - chr1_4:75361677-75361696 Msa0185280:intron 40.0%
ATGTTGCCTTCGTTGATGTT+GGG - chr1_4:75361678-75361697 Msa0185280:intron 40.0%
GCATTGCCGGATTTAAAAAG+GGG - chr1_4:75361720-75361739 Msa0185280:intron 40.0%
TTGATGTTTACCAGAATGCC+AGG - chr1_4:75361849-75361868 Msa0185280:intron 40.0%
TGATGTTTACCAGAATGCCA+GGG - chr1_4:75361850-75361869 Msa0185280:intron 40.0%
ATTAAGCACTCGATGTTCAG+AGG + chr1_4:75361941-75361960 None:intergenic 40.0%
TCTGAACATCGAGTGCTTAA+TGG - chr1_4:75361940-75361959 Msa0185280:intron 40.0%
! TAATGGATGAGAAGGATGTG+AGG - chr1_4:75361957-75361976 Msa0185280:CDS 40.0%
AATGGATGAGAAGGATGTGA+GGG - chr1_4:75361958-75361977 Msa0185280:CDS 40.0%
GCAACTATCTCTTCCAATCT+TGG - chr1_4:75362006-75362025 Msa0185280:CDS 40.0%
TACGGTTGAGAATATCCACA+TGG - chr1_4:75362075-75362094 Msa0185280:CDS 40.0%
TGAGAATATCCACATGGTTG+AGG - chr1_4:75362081-75362100 Msa0185280:CDS 40.0%
TCTTCAAAAAGGAACCTAGG+CGG - chr1_4:75362155-75362174 Msa0185280:CDS 40.0%
CTGGAACTCTCGTACTTTAA+AGG + chr1_4:75362245-75362264 None:intergenic 40.0%
!! CTTTAAAGTACGAGAGTTCC+AGG - chr1_4:75362243-75362262 Msa0185280:intron 40.0%
!!! TTTTTTTTTTTTGGGGGGGG+GGG - chr1_4:75362336-75362355 Msa0185280:intron 40.0%
GGGGAGTTGTTAGTGTTATA+TGG - chr1_4:75362360-75362379 Msa0185280:CDS 40.0%
!!! CGACACTCATTTTAAAACGG+AGG + chr1_4:75362436-75362455 None:intergenic 40.0%
!!! CGACATTCATTTTGAAACGG+AGG - chr1_4:75362690-75362709 Msa0185280:CDS 40.0%
ATGCAACTCTCCGCAAAAAA+TGG + chr1_4:75362941-75362960 None:intergenic 40.0%
CCACGAAAGAGAAACTGAAA+AGG + chr1_4:75363046-75363065 None:intergenic 40.0%
! CCTTTTCAGTTTCTCTTTCG+TGG - chr1_4:75363043-75363062 Msa0185280:intron 40.0%
TCTCTTTCGTGGAAATCTTC+TGG - chr1_4:75363054-75363073 Msa0185280:intron 40.0%
! TTATTGTCTGATTCGCTGTC+TGG + chr1_4:75363090-75363109 None:intergenic 40.0%
TAGGTATGGGATTTCCCTTT+GGG + chr1_4:75363131-75363150 None:intergenic 40.0%
AAATCCCATACCTAGTTCCA+AGG - chr1_4:75363137-75363156 Msa0185280:intron 40.0%
AGTACCTTGGAACTAGGTAT+GGG + chr1_4:75363144-75363163 None:intergenic 40.0%
AATGTCAGTACCTTGGAACT+AGG + chr1_4:75363150-75363169 None:intergenic 40.0%
TCTGAAGAATGTCAGTACCT+TGG + chr1_4:75363157-75363176 None:intergenic 40.0%
! GTACTGACATTCTTCAGAAC+AGG - chr1_4:75363159-75363178 Msa0185280:intron 40.0%
GAGTCAAAAGACTGCCAATA+GGG + chr1_4:75363294-75363313 None:intergenic 40.0%
AGAGTCAAAAGACTGCCAAT+AGG + chr1_4:75363295-75363314 None:intergenic 40.0%
ACTCTTGCATTTGTGCAGAT+TGG - chr1_4:75363310-75363329 Msa0185280:intron 40.0%
GGCCCTTTCCAAACTAAAAA+CGG - chr1_4:75363331-75363350 Msa0185280:intron 40.0%
!!! CCTTGTCACCGTTTTTAGTT+TGG + chr1_4:75363342-75363361 None:intergenic 40.0%
CCAAACTAAAAACGGTGACA+AGG - chr1_4:75363339-75363358 Msa0185280:intron 40.0%
TAAAAACGGTGACAAGGGAA+AGG - chr1_4:75363345-75363364 Msa0185280:intron 40.0%
TGGAATTGTGTCTGTTGAGT+CGG - chr1_4:75363396-75363415 Msa0185280:intron 40.0%
! CTTTGAAGAGGAAGAAACTG+AGG - chr1_4:75363584-75363603 Msa0185280:CDS 40.0%
! TCAGCAGATTCTTTGGTAAC+TGG + chr1_4:75363612-75363631 None:intergenic 40.0%
GTATCTGTATCCATTTGCAC+AGG + chr1_4:75363786-75363805 None:intergenic 40.0%
GCAAATGGATACAGATACCA+AGG - chr1_4:75363788-75363807 Msa0185280:CDS 40.0%
AGATACCAAGGTACATTCCA+AGG - chr1_4:75363800-75363819 Msa0185280:CDS 40.0%
! GTTTTCCTTGGAATGTACCT+TGG + chr1_4:75363808-75363827 None:intergenic 40.0%
!! CTCTCTGGAATTGTCTATAG+CGG - chr1_4:75364083-75364102 Msa0185280:CDS 40.0%
!! TCTCTGGAATTGTCTATAGC+GGG - chr1_4:75364084-75364103 Msa0185280:CDS 40.0%
!!! AGCGGGGTTTGTTATTTTAC+TGG - chr1_4:75364101-75364120 Msa0185280:CDS 40.0%
! TTACTGGCTGTGTTTGTAAC+AGG - chr1_4:75364117-75364136 Msa0185280:CDS 40.0%
AGAGGTAGTTTATGGTGCAA+TGG - chr1_4:75364186-75364205 Msa0185280:CDS 40.0%
TATTACCAAACTTCAGGAGG+TGG - chr1_4:75364463-75364482 Msa0185280:CDS 40.0%
CTTGGCATTGTATACACCTT+TGG + chr1_4:75364522-75364541 None:intergenic 40.0%
! CTCAAAAAGGTGAGGCATTT+CGG - chr1_4:75364551-75364570 Msa0185280:CDS 40.0%
GTCTTTACTCTTAGCTGAAC+TGG - chr1_4:75364577-75364596 Msa0185280:CDS 40.0%
! ACCGATTACCTTCTGTTTCT+CGG + chr1_4:75364938-75364957 None:intergenic 40.0%
TATATCAGCTGACAAGAGGA+CGG + chr1_4:75365117-75365136 None:intergenic 40.0%
GATCGAGACTATTATGGTTC+TGG - chr1_4:75365183-75365202 Msa0185280:intron 40.0%
!!! GGTTTTGGTTTCGTCATGAT+CGG + chr1_4:75365291-75365310 None:intergenic 40.0%
! TCTGATTTGTCAGTCTCCAT+TGG + chr1_4:75365477-75365496 None:intergenic 40.0%
ACTGACAAATCAGAGAACAC+AGG - chr1_4:75365483-75365502 Msa0185280:intron 40.0%
GATATGTTAGAGCTCTCTGT+TGG - chr1_4:75365547-75365566 Msa0185280:intron 40.0%
GATTTGGAAGGAAGAAAACC+AGG + chr1_4:75365613-75365632 None:intergenic 40.0%
CCTAGAACACTAGATTTGGA+AGG + chr1_4:75365625-75365644 None:intergenic 40.0%
CCTTCCAAATCTAGTGTTCT+AGG - chr1_4:75365622-75365641 Msa0185280:intron 40.0%
! TGTGTACCATTTTGTACTGG+TGG - chr1_4:75365654-75365673 Msa0185280:five_prime_UTR 40.0%
!! TACCATTTTGTACTGGTGGA+AGG - chr1_4:75365658-75365677 Msa0185280:five_prime_UTR 40.0%
TTCCTTCCACCAGTACAAAA+TGG + chr1_4:75365663-75365682 None:intergenic 40.0%
ATGCCACACAAAAGCAAAAC+TGG + chr1_4:75365718-75365737 None:intergenic 40.0%
CATATTATCAGTCCGGTTAG+TGG - chr1_4:75365798-75365817 Msa0185280:five_prime_UTR 40.0%
! AGTGGAGTGCTTGTGTTATA+CGG - chr1_4:75365839-75365858 Msa0185280:five_prime_UTR 40.0%
TGGGGACTGGAATGGAATTT+CGG + chr1_4:75359967-75359986 None:intergenic 45.0%
!! CTTTTGAGTAGTTTGGGGAC+TGG + chr1_4:75359980-75359999 None:intergenic 45.0%
CGCTAACGGAACTTATGAGA+AGG + chr1_4:75360008-75360027 None:intergenic 45.0%
GAGAGCTTACGAAACGCTAA+CGG + chr1_4:75360022-75360041 None:intergenic 45.0%
!!! AGAGGGTTTTGAAGGGTTTC+TGG + chr1_4:75360071-75360090 None:intergenic 45.0%
!!! GAGGAAGAGAGGGTTTTGAA+GGG + chr1_4:75360078-75360097 None:intergenic 45.0%
!! AGAGGAAGAGAGGGTTTTGA+AGG + chr1_4:75360079-75360098 None:intergenic 45.0%
GACGGAACGGAAATGAAAAG+AGG + chr1_4:75360143-75360162 None:intergenic 45.0%
GTGACATTGTCCATGCTTCA+TGG - chr1_4:75360856-75360875 Msa0185280:CDS 45.0%
CAATAACAGCCCATGAAGCA+TGG + chr1_4:75360869-75360888 None:intergenic 45.0%
TCACTTAGTGGGATAAGGCT+TGG - chr1_4:75360952-75360971 Msa0185280:intron 45.0%
CAACCAAAGATGAGTGTGGT+CGG - chr1_4:75361086-75361105 Msa0185280:intron 45.0%
AAACCGACCACACTCATCTT+TGG + chr1_4:75361092-75361111 None:intergenic 45.0%
AATTGCTGGAGTTTCACGCT+TGG + chr1_4:75361189-75361208 None:intergenic 45.0%
AACGGTTTATTGGGACTGCT+GGG - chr1_4:75361228-75361247 Msa0185280:CDS 45.0%
TTCAAATCCCTCTGCAGTTC+CGG + chr1_4:75361329-75361348 None:intergenic 45.0%
AATGTCACTGAAGGACCTGA+TGG - chr1_4:75361362-75361381 Msa0185280:intron 45.0%
! GCTGTTGTTGATTGCTGCAT+TGG - chr1_4:75361500-75361519 Msa0185280:CDS 45.0%
TCTCGTGAATCAAGTGAAGC+GGG + chr1_4:75361595-75361614 None:intergenic 45.0%
GTCTCGTGAATCAAGTGAAG+CGG + chr1_4:75361596-75361615 None:intergenic 45.0%
AGCATGCAAGTTTGCATTGC+CGG - chr1_4:75361707-75361726 Msa0185280:intron 45.0%
! CAGCTGCCCCTTTTTAAATC+CGG + chr1_4:75361729-75361748 None:intergenic 45.0%
TACTGTCCCATTCGTACGAT+AGG - chr1_4:75361753-75361772 Msa0185280:intron 45.0%
TGCTTGTGAGAAGCTGAAGA+AGG - chr1_4:75361892-75361911 Msa0185280:intron 45.0%
! CGAGTGCTTAATGGATGAGA+AGG - chr1_4:75361949-75361968 Msa0185280:intron 45.0%
ATGGATGAGAAGGATGTGAG+GGG - chr1_4:75361959-75361978 Msa0185280:CDS 45.0%
ACTTGCAGAAGCAGGTCTTA+CGG - chr1_4:75362057-75362076 Msa0185280:CDS 45.0%
GAATATCCACATGGTTGAGG+TGG - chr1_4:75362084-75362103 Msa0185280:CDS 45.0%
!!! TTTTTTTTTTTGGGGGGGGG+GGG - chr1_4:75362337-75362356 Msa0185280:intron 45.0%
CTAGGTATGGGATTTCCCTT+TGG + chr1_4:75363132-75363151 None:intergenic 45.0%
CAGTACCTTGGAACTAGGTA+TGG + chr1_4:75363145-75363164 None:intergenic 45.0%
ACGCCCATGTGAAATCATTG+TGG - chr1_4:75363491-75363510 Msa0185280:intron 45.0%
ACATCGTTGTCATTGGAGCT+AGG + chr1_4:75363690-75363709 None:intergenic 45.0%
AGGAGATAAGCCTGTGCAAA+TGG - chr1_4:75363773-75363792 Msa0185280:CDS 45.0%
!! CTCTGGAATTGTCTATAGCG+GGG - chr1_4:75364085-75364104 Msa0185280:CDS 45.0%
GCTGTGTTTGTAACAGGTTG+AGG - chr1_4:75364123-75364142 Msa0185280:CDS 45.0%
TACCTCTGCAACAGGAATGT+TGG + chr1_4:75364173-75364192 None:intergenic 45.0%
CCATAAACTACCTCTGCAAC+AGG + chr1_4:75364181-75364200 None:intergenic 45.0%
CCTGTTGCAGAGGTAGTTTA+TGG - chr1_4:75364178-75364197 Msa0185280:CDS 45.0%
GGCAACTGTTGATGTTCAGA+AGG - chr1_4:75364207-75364226 Msa0185280:CDS 45.0%
TGTTCAGAAGGCTGTAGAGA+AGG - chr1_4:75364219-75364238 Msa0185280:CDS 45.0%
CTGAAGCAACGACAAACTCT+TGG + chr1_4:75364430-75364449 None:intergenic 45.0%
AGTTTGTCGTTGCTTCAGAG+AGG - chr1_4:75364432-75364451 Msa0185280:CDS 45.0%
GTTTGTCGTTGCTTCAGAGA+GGG - chr1_4:75364433-75364452 Msa0185280:CDS 45.0%
ATCTTCCACCTCCTGAAGTT+TGG + chr1_4:75364471-75364490 None:intergenic 45.0%
AACTTCAGGAGGTGGAAGAT+TGG - chr1_4:75364471-75364490 Msa0185280:CDS 45.0%
! GAAGATTGGCTATACGAGGA+TGG - chr1_4:75364485-75364504 Msa0185280:CDS 45.0%
GATGGTGAAGACGAAACCAA+AGG - chr1_4:75364503-75364522 Msa0185280:CDS 45.0%
AGGTGTATACAATGCCAAGC+TGG - chr1_4:75364523-75364542 Msa0185280:CDS 45.0%
!! CTTTTTGAGCTCTTCCAGCT+TGG + chr1_4:75364540-75364559 None:intergenic 45.0%
CAAGCTGGAAGAGCTCAAAA+AGG - chr1_4:75364538-75364557 Msa0185280:CDS 45.0%
TGGAAGAGCTCAAAAAGGTG+AGG - chr1_4:75364543-75364562 Msa0185280:CDS 45.0%
! AAAAGGTGAGGCATTTCGGA+TGG - chr1_4:75364555-75364574 Msa0185280:CDS 45.0%
TGACATTGCCGAGAAACAGA+AGG - chr1_4:75364927-75364946 Msa0185280:intron 45.0%
GCCGAGAAACAGAAGGTAAT+CGG - chr1_4:75364934-75364953 Msa0185280:intron 45.0%
ATATCAGCTGACAAGAGGAC+GGG + chr1_4:75365116-75365135 None:intergenic 45.0%
AAAAAGCTGAGGCTGTCGAT+AGG - chr1_4:75365141-75365160 Msa0185280:intron 45.0%
! TTTCGTCATGATCGGCTTAC+AGG + chr1_4:75365283-75365302 None:intergenic 45.0%
CCCTGCATTGTCATTACTAC+CGG + chr1_4:75365418-75365437 None:intergenic 45.0%
CCGGTAGTAATGACAATGCA+GGG - chr1_4:75365415-75365434 Msa0185280:intron 45.0%
CGGTAGTAATGACAATGCAG+GGG - chr1_4:75365416-75365435 Msa0185280:intron 45.0%
AATGACAATGCAGGGGACAA+TGG - chr1_4:75365423-75365442 Msa0185280:intron 45.0%
! TATTGTGGTATTTGGGGTCC+TGG - chr1_4:75365592-75365611 Msa0185280:intron 45.0%
!! GCTCCAGTTTTGCTTTTGTG+TGG - chr1_4:75365712-75365731 Msa0185280:five_prime_UTR 45.0%
ACTGATAGCACTCCACTAAC+CGG + chr1_4:75365813-75365832 None:intergenic 45.0%
! TTAGTGGAGTGCTATCAGTC+CGG - chr1_4:75365814-75365833 Msa0185280:five_prime_UTR 45.0%
AACACAAGCACTCCACTAAC+CGG + chr1_4:75365836-75365855 None:intergenic 45.0%
ATCACTCTTTCGTCACTCCA+AGG + chr1_4:75365904-75365923 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTTTTG+GGG - chr1_4:75362329-75362348 Msa0185280:intron 5.0%
TCGGATTCTCCAGACATCTC+TGG - chr1_4:75359837-75359856 Msa0185280:three_prime_UTR 50.0%
CGGATTCTCCAGACATCTCT+GGG - chr1_4:75359838-75359857 Msa0185280:three_prime_UTR 50.0%
TCTTTGGTCCCAGAGATGTC+TGG + chr1_4:75359849-75359868 None:intergenic 50.0%
GAGTTGTCGACGTGCTTCTT+TGG + chr1_4:75359865-75359884 None:intergenic 50.0%
CGTCGACAACTCGTTCAAAC+TGG - chr1_4:75359873-75359892 Msa0185280:three_prime_UTR 50.0%
GGGACTGGAATGGAATTTCG+GGG + chr1_4:75359965-75359984 None:intergenic 50.0%
GGGGACTGGAATGGAATTTC+GGG + chr1_4:75359966-75359985 None:intergenic 50.0%
GAGTAGTTTGGGGACTGGAA+TGG + chr1_4:75359975-75359994 None:intergenic 50.0%
CGATCGAGAAGAGGAAGAGA+GGG + chr1_4:75360088-75360107 None:intergenic 50.0%
GCTGTATTGTTGCCGTTGCA+AGG - chr1_4:75361129-75361148 Msa0185280:intron 50.0%
AATCCCTCTCTGCCTTGCAA+CGG + chr1_4:75361144-75361163 None:intergenic 50.0%
CAACGGTTTATTGGGACTGC+TGG - chr1_4:75361227-75361246 Msa0185280:CDS 50.0%
ACGGTTTATTGGGACTGCTG+GGG - chr1_4:75361229-75361248 Msa0185280:CDS 50.0%
TTGGATGCAGCCACTATTGC+AGG - chr1_4:75361563-75361582 Msa0185280:CDS 50.0%
ACAGCAACTGCCTTGGCTTA+TGG - chr1_4:75361617-75361636 Msa0185280:intron 50.0%
AGCATGCCCAACATCAACGA+AGG + chr1_4:75361687-75361706 None:intergenic 50.0%
CAGGGACCTATCGTACGAAT+GGG + chr1_4:75361762-75361781 None:intergenic 50.0%
CATTCGTACGATAGGTCCCT+GGG - chr1_4:75361761-75361780 Msa0185280:intron 50.0%
GTCAAAATCCCTACCACCCA+GGG + chr1_4:75361780-75361799 None:intergenic 50.0%
TCCAATCTTGGAGCGTGTGA+AGG - chr1_4:75362018-75362037 Msa0185280:CDS 50.0%
CCAATCTTGGAGCGTGTGAA+GGG - chr1_4:75362019-75362038 Msa0185280:CDS 50.0%
! TGTGAAGGGACCTTTGGAGA+AGG - chr1_4:75362033-75362052 Msa0185280:CDS 50.0%
TCTGCAAGTGCCTTCTCCAA+AGG + chr1_4:75362046-75362065 None:intergenic 50.0%
ATCCACATGGTTGAGGTGGT+TGG - chr1_4:75362088-75362107 Msa0185280:CDS 50.0%
AACCAACCACCTCAACCATG+TGG + chr1_4:75362093-75362112 None:intergenic 50.0%
! ATGGTTGAGGTGGTTGGTTC+CGG - chr1_4:75362094-75362113 Msa0185280:CDS 50.0%
GATAGCTGGTACACGAGAAC+CGG + chr1_4:75362116-75362135 None:intergenic 50.0%
CTAGCATTCATAGTCCGCCT+AGG + chr1_4:75362172-75362191 None:intergenic 50.0%
!!! TTTTTTTTTTGGGGGGGGGG+GGG - chr1_4:75362338-75362357 Msa0185280:intron 50.0%
TTGTCATTGGAGCTAGGAGG+TGG + chr1_4:75363684-75363703 None:intergenic 50.0%
TCGTTGTCATTGGAGCTAGG+AGG + chr1_4:75363687-75363706 None:intergenic 50.0%
AAGGTAACTGCTGATACCCC+TGG - chr1_4:75363726-75363745 Msa0185280:CDS 50.0%
AGGTAACTGCTGATACCCCT+GGG - chr1_4:75363727-75363746 Msa0185280:CDS 50.0%
! GTGGAAGGAGAGAGCTTGTT+TGG - chr1_4:75363943-75363962 Msa0185280:CDS 50.0%
GACCAACATTCCTGTTGCAG+AGG - chr1_4:75364168-75364187 Msa0185280:CDS 50.0%
TCTGCAAGATCGAGTGATGG+AGG - chr1_4:75364255-75364274 Msa0185280:CDS 50.0%
! GGTGGAAGATTGGCTATACG+AGG - chr1_4:75364481-75364500 Msa0185280:CDS 50.0%
!! AGGACGGGGTTGGCAAATTT+TGG + chr1_4:75365101-75365120 None:intergenic 50.0%
TATCAGCTGACAAGAGGACG+GGG + chr1_4:75365115-75365134 None:intergenic 50.0%
GACGAAACCAAAACCGAAGC+CGG - chr1_4:75365296-75365315 Msa0185280:intron 50.0%
!! TGTTTCTGGAGTAGCTGGCT+TGG + chr1_4:75365322-75365341 None:intergenic 50.0%
!! GTTGGTGTTTCTGGAGTAGC+TGG + chr1_4:75365327-75365346 None:intergenic 50.0%
! GGTGGAGTTGTTGGTGTTTC+TGG + chr1_4:75365336-75365355 None:intergenic 50.0%
ACAACCAGAACAGCAACCTC+AGG - chr1_4:75365380-75365399 Msa0185280:intron 50.0%
GCCGGTAGTAATGACAATGC+AGG - chr1_4:75365414-75365433 Msa0185280:intron 50.0%
AATCAAGTCCCACCAGTCTC+TGG - chr1_4:75365447-75365466 Msa0185280:intron 50.0%
AGTGCTATCAGTCCGGTTAG+TGG - chr1_4:75365821-75365840 Msa0185280:five_prime_UTR 50.0%
GCGATCGAGAAGAGGAAGAG+AGG + chr1_4:75360089-75360108 None:intergenic 55.0%
AACGAAGCGCGATCGAGAAG+AGG + chr1_4:75360097-75360116 None:intergenic 55.0%
CTTCTCGATCGCGCTTCGTT+AGG - chr1_4:75360097-75360116 Msa0185280:three_prime_UTR 55.0%
TTGCCGTTGCAAGGCAGAGA+GGG - chr1_4:75361138-75361157 Msa0185280:intron 55.0%
TTGCTGATCCGGAACTGCAG+AGG - chr1_4:75361318-75361337 Msa0185280:CDS 55.0%
TGCTGATCCGGAACTGCAGA+GGG - chr1_4:75361319-75361338 Msa0185280:CDS 55.0%
CGGGTGCAAACCTGCAATAG+TGG + chr1_4:75361576-75361595 None:intergenic 55.0%
CGAGACAACAGCAACTGCCT+TGG - chr1_4:75361610-75361629 Msa0185280:intron 55.0%
CCAGGGACCTATCGTACGAA+TGG + chr1_4:75361763-75361782 None:intergenic 55.0%
CCATTCGTACGATAGGTCCC+TGG - chr1_4:75361760-75361779 Msa0185280:intron 55.0%
CGTCAAAATCCCTACCACCC+AGG + chr1_4:75361781-75361800 None:intergenic 55.0%
!! GGGTGGTAGGGATTTTGACG+AGG - chr1_4:75361781-75361800 Msa0185280:intron 55.0%
TCAGACAAGCCCTGGCATTC+TGG + chr1_4:75361862-75361881 None:intergenic 55.0%
AGAATGCCAGGGCTTGTCTG+AGG - chr1_4:75361861-75361880 Msa0185280:intron 55.0%
! CAGGGCTTGTCTGAGGTTGA+GGG - chr1_4:75361868-75361887 Msa0185280:intron 55.0%
GGTCCTCAGTGCAAATCCAG+AGG - chr1_4:75361913-75361932 Msa0185280:intron 55.0%
GTGCCTCTGGATTTGCACTG+AGG + chr1_4:75361919-75361938 None:intergenic 55.0%
!! TCGATGTTCAGAGGTGCCTC+TGG + chr1_4:75361932-75361951 None:intergenic 55.0%
CCCTTCACACGCTCCAAGAT+TGG + chr1_4:75362022-75362041 None:intergenic 55.0%
!! GAGAAGGCACTTGCAGAAGC+AGG - chr1_4:75362049-75362068 Msa0185280:CDS 55.0%
ATGCTAGCGAGTGTGTTGCC+AGG - chr1_4:75362185-75362204 Msa0185280:intron 55.0%
TGCTAGCGAGTGTGTTGCCA+GGG - chr1_4:75362186-75362205 Msa0185280:intron 55.0%
!!! TTTTTTTTTGGGGGGGGGGG+GGG - chr1_4:75362339-75362358 Msa0185280:intron 55.0%
GGTAACTGCTGATACCCCTG+GGG - chr1_4:75363728-75363747 Msa0185280:CDS 55.0%
GATACCCCTGGGGCTGAAAA+TGG - chr1_4:75363738-75363757 Msa0185280:CDS 55.0%
!!! CATGCCATTTTCAGCCCCAG+GGG + chr1_4:75363745-75363764 None:intergenic 55.0%
!!! GCATGCCATTTTCAGCCCCA+GGG + chr1_4:75363746-75363765 None:intergenic 55.0%
GGCTGAAAATGGCATGCCTG+AGG - chr1_4:75363749-75363768 Msa0185280:CDS 55.0%
GAAAATGGCATGCCTGAGGC+AGG - chr1_4:75363753-75363772 Msa0185280:CDS 55.0%
ACAGGCTTATCTCCTGCCTC+AGG + chr1_4:75363768-75363787 None:intergenic 55.0%
GGCTCTGCAAGATCGAGTGA+TGG - chr1_4:75364252-75364271 Msa0185280:CDS 55.0%
ACCAACAACTCCACCTCCTC+AGG - chr1_4:75365341-75365360 Msa0185280:intron 55.0%
TCCTGAGGAGGTGGAGTTGT+TGG + chr1_4:75365345-75365364 None:intergenic 55.0%
ACAACTCCACCTCCTCAGGA+AGG - chr1_4:75365345-75365364 Msa0185280:intron 55.0%
ACCAGAACAGCAACCTCAGG+AGG - chr1_4:75365383-75365402 Msa0185280:intron 55.0%
! TCCTCCTGAGGTTGCTGTTC+TGG + chr1_4:75365387-75365406 None:intergenic 55.0%
CCTCAGGAGGATGCTAATGC+CGG - chr1_4:75365396-75365415 Msa0185280:intron 55.0%
! TTGGTTCGCCAGAGACTGGT+GGG + chr1_4:75365458-75365477 None:intergenic 55.0%
!! ATTGGTTCGCCAGAGACTGG+TGG + chr1_4:75365459-75365478 None:intergenic 55.0%
ACCAGTCTCTGGCGAACCAA+TGG - chr1_4:75365458-75365477 Msa0185280:intron 55.0%
!! TCCATTGGTTCGCCAGAGAC+TGG + chr1_4:75365462-75365481 None:intergenic 55.0%
GTTGCCGTTGCAAGGCAGAG+AGG - chr1_4:75361137-75361156 Msa0185280:intron 60.0%
TCGTACGATAGGTCCCTGGG+TGG - chr1_4:75361764-75361783 Msa0185280:intron 60.0%
ACGATAGGTCCCTGGGTGGT+AGG - chr1_4:75361768-75361787 Msa0185280:intron 60.0%
CGATAGGTCCCTGGGTGGTA+GGG - chr1_4:75361769-75361788 Msa0185280:intron 60.0%
CCTCAACCTCAGACAAGCCC+TGG + chr1_4:75361870-75361889 None:intergenic 60.0%
! CCAGGGCTTGTCTGAGGTTG+AGG - chr1_4:75361867-75361886 Msa0185280:intron 60.0%
GGAGCGTGTGAAGGGACCTT+TGG - chr1_4:75362027-75362046 Msa0185280:CDS 60.0%
GCTAGCGAGTGTGTTGCCAG+GGG - chr1_4:75362187-75362206 Msa0185280:intron 60.0%
ACACTGCAATGCAGCACCCC+TGG + chr1_4:75362206-75362225 None:intergenic 60.0%
!!! TTTTTTTTGGGGGGGGGGGG+GGG - chr1_4:75362340-75362359 Msa0185280:CDS 60.0%
!!! GGCATGCCATTTTCAGCCCC+AGG + chr1_4:75363747-75363766 None:intergenic 60.0%
AGCTGACAAGAGGACGGGGT+TGG + chr1_4:75365111-75365130 None:intergenic 60.0%
!! TCTGGAGTAGCTGGCTTGGC+CGG + chr1_4:75365318-75365337 None:intergenic 60.0%
TGCTCACCTTCCTGAGGAGG+TGG + chr1_4:75365354-75365373 None:intergenic 60.0%
TGCTGCTCACCTTCCTGAGG+AGG + chr1_4:75365357-75365376 None:intergenic 60.0%
TGCTGCTGCTCACCTTCCTG+AGG + chr1_4:75365360-75365379 None:intergenic 60.0%
CCGGCATTAGCATCCTCCTG+AGG + chr1_4:75365399-75365418 None:intergenic 60.0%
!!! TTTTTTTGGGGGGGGGGGGG+GGG - chr1_4:75362341-75362360 Msa0185280:CDS 65.0%
GGTGGTGCAGCAGCATCAGC+AGG + chr1_4:75363666-75363685 None:intergenic 65.0%
!! GGCTTGGCCGGCTTCGGTTT+TGG + chr1_4:75365306-75365325 None:intergenic 65.0%
!! GTAGCTGGCTTGGCCGGCTT+CGG + chr1_4:75365312-75365331 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 75359832 75365931 75359832 ID=Msa0185280;Name=Msa0185280
chr1_4 mRNA 75359832 75365931 75359832 ID=Msa0185280-mRNA-1;Parent=Msa0185280;Name=Msa0185280-mRNA-1;_AED=0.02;_eAED=0.02;_QI=318|1|1|1|0.8|0.63|11|393|858
chr1_4 exon 75359832 75359927 75359832 ID=Msa0185280-mRNA-1:exon:25679;Parent=Msa0185280-mRNA-1
chr1_4 exon 75359951 75360485 75359951 ID=Msa0185280-mRNA-1:exon:25678;Parent=Msa0185280-mRNA-1
chr1_4 exon 75360601 75360731 75360601 ID=Msa0185280-mRNA-1:exon:25677;Parent=Msa0185280-mRNA-1
chr1_4 exon 75360815 75360964 75360815 ID=Msa0185280-mRNA-1:exon:25676;Parent=Msa0185280-mRNA-1
chr1_4 exon 75361204 75361350 75361204 ID=Msa0185280-mRNA-1:exon:25675;Parent=Msa0185280-mRNA-1
chr1_4 exon 75361430 75361624 75361430 ID=Msa0185280-mRNA-1:exon:25674;Parent=Msa0185280-mRNA-1
chr1_4 exon 75361954 75362181 75361954 ID=Msa0185280-mRNA-1:exon:25673;Parent=Msa0185280-mRNA-1
chr1_4 exon 75362340 75362435 75362340 ID=Msa0185280-mRNA-1:exon:25672;Parent=Msa0185280-mRNA-1
chr1_4 exon 75362515 75362736 75362515 ID=Msa0185280-mRNA-1:exon:25671;Parent=Msa0185280-mRNA-1
chr1_4 exon 75363499 75364699 75363499 ID=Msa0185280-mRNA-1:exon:25670;Parent=Msa0185280-mRNA-1
chr1_4 exon 75365645 75365931 75365645 ID=Msa0185280-mRNA-1:exon:25669;Parent=Msa0185280-mRNA-1
chr1_4 five_prime_UTR 75365645 75365931 75365645 ID=Msa0185280-mRNA-1:five_prime_utr;Parent=Msa0185280-mRNA-1
chr1_4 five_prime_UTR 75364669 75364699 75364669 ID=Msa0185280-mRNA-1:five_prime_utr;Parent=Msa0185280-mRNA-1
chr1_4 CDS 75363499 75364668 75363499 ID=Msa0185280-mRNA-1:cds;Parent=Msa0185280-mRNA-1
chr1_4 CDS 75362515 75362736 75362515 ID=Msa0185280-mRNA-1:cds;Parent=Msa0185280-mRNA-1
chr1_4 CDS 75362340 75362435 75362340 ID=Msa0185280-mRNA-1:cds;Parent=Msa0185280-mRNA-1
chr1_4 CDS 75361954 75362181 75361954 ID=Msa0185280-mRNA-1:cds;Parent=Msa0185280-mRNA-1
chr1_4 CDS 75361430 75361624 75361430 ID=Msa0185280-mRNA-1:cds;Parent=Msa0185280-mRNA-1
chr1_4 CDS 75361204 75361350 75361204 ID=Msa0185280-mRNA-1:cds;Parent=Msa0185280-mRNA-1
chr1_4 CDS 75360815 75360964 75360815 ID=Msa0185280-mRNA-1:cds;Parent=Msa0185280-mRNA-1
chr1_4 CDS 75360601 75360731 75360601 ID=Msa0185280-mRNA-1:cds;Parent=Msa0185280-mRNA-1
chr1_4 CDS 75360248 75360485 75360248 ID=Msa0185280-mRNA-1:cds;Parent=Msa0185280-mRNA-1
chr1_4 three_prime_UTR 75359951 75360247 75359951 ID=Msa0185280-mRNA-1:three_prime_utr;Parent=Msa0185280-mRNA-1
chr1_4 three_prime_UTR 75359832 75359927 75359832 ID=Msa0185280-mRNA-1:three_prime_utr;Parent=Msa0185280-mRNA-1
Gene Sequence

>Msa0185280

ATGAGTGTGGTCGGTTTTGATTTCGGTAATGAGAGCTGTATTGTTGCCGTTGCAAGGCAGAGAGGGATTGATGTTGTGCTCAACGATGAGTCCAAGCGTGAAACTCCAGCAATTGTGTGTTTTGGTGACAAACAACGGTTTATTGGGACTGCTGGGGCTGCTTCAACTATGATGAATCCGAAAAATTCAATCTCGCAGATAAAGAGATTGATTGGTAAAAAATTTGCTGATCCGGAACTGCAGAGGGATTTGAAGTCATTGCCTTTTAATGTCACTGAAGGACCTGATGGATATCCATTGATTCATGCACGATATCTGGGCGAATCTAGAGAATTCACAGCTACTCAAGTCTTTGGGATGATGTTGTCGAATCTTAAAGAAATAGCTCAGAAAAATCTGAATGCGGCTGTTGTTGATTGCTGCATTGGAATTCCAGTCTACTTTACCGATCTTCAGAGGAGATCTGTATTGGATGCAGCCACTATTGCAGGTTTGCACCCGCTTCACTTGATTCACGAGACAACAGCAACTGCCTTGGCTTATGGAATTTATAAGACTGATCTTCCGGAAAATGAATGGCTGAATGTTGCCTTCGTTGATGTTGGGCATGCTAGCATGCAAGTTTGCATTGCCGGATTTAAAAAGGGGCAGCTGCAAGTACTGTCCCATTCGTACGATAGGTCCCTGGGTGGTAGGGATTTTGACGAGGCTCTTTTCCATCATTTTGCTGCCAAATTTAAGGAGGAATATAAGATTGATGTTTACCAGAATGCCAGGGCTTGTCTGAGGTTGAGGGCTGCTTGTGAGAAGCTGAAGAAGGTCCTCAGTGCAAATCCAGAGGCACCTCTGAACATCGAGTGCTTAATGGATGAGAAGGATGTGAGGGGATTCATCAAGCGTGATGATTTTGAGCAACTATCTCTTCCAATCTTGGAGCGTGTGAAGGGACCTTTGGAGAAGGCACTTGCAGAAGCAGGTCTTACGGTTGAGAATATCCACATGGTTGAGGTGGTTGGTTCCGGTTCTCGTGTACCAGCTATCAACAAAATATTGACAGAGTTCTTCAAAAAGGAACCTAGGCGGACTATGAATGCTAGCGAGTGTGTTGCCAGGGGTGCTGCATTGCAGTGTGCAATTCTCAGTCCAACCTTTAAAGTACGAGAGTTCCAGGTCAACGAAAGCTTCCCCTTTTCAGTTTCTCTTTCGTGGAAATCTTCTGGTTCAGATGCACCAGACAGCGAATCAGACAATAAGCAAAGTACCATTGTTTTCCCAAAGGGAAATCCCATACCTAGTTCCAAGGTACTGACATTCTTCAGAACAGGAACCTTTTCTGTTGATGTACAATGTCATGATCTCAGTGAAACGCCTACGAAAATCAGCACATATACTATTGGCCCTTTCCAAACTAAAAACGGTGACAAGGGAAAGGTTAAAGCAAAAGTTCGTTTGAATCTTCATGGAATTGTGTCTGTTGAGTCGGCAACACTCTTTGAAGAGGAAGAAACTGAGGTTCCAGTTACCAAAGAATCTGCTGAAGAAAATGCTAAGATGGAAACTGACGAAGCTCCTGCTGATGCTGCTGCACCACCTCCTAGCTCCAATGACAACGATGTTAATATGCAAGATGCTAAGGTAACTGCTGATACCCCTGGGGCTGAAAATGGCATGCCTGAGGCAGGAGATAAGCCTGTGCAAATGGATACAGATACCAAGGTTGAGGCTCCAAAGAAAAAAGTGAAGAAGACCAACATTCCTGTTGCAGAGGTAGTTTATGGTGCAATGGCAACTGTTGATGTTCAGAAGGCTGTAGAGAAGGAGTTTGAAATGGCTCTGCAAGATCGAGTGATGGAGGAAACAAAAGACAAGAAAAATGCAGTTGAGGCTTATGTCTATGACATGAGAAATAAGCTTAATGACAAATACCAAGAGTTTGTCGTTGCTTCAGAGAGGGATGAATTTATTACCAAACTTCAGGAGGTGGAAGATTGGCTATACGAGGATGGTGAAGACGAAACCAAAGGTGTATACAATGCCAAGCTGGAAGAGCTCAAAAAGCAAGGGGATCCAATTGAAGAGCGCTATAAAGAGTACTCAGACAGGGGTGAAGTAATTGATCAACTGATCTATTGTATAAAAAGTTATAGAGAAGCTGCAATGTCTAATGATCCCAAATTTGATCACATTGACATTGCCGAGAAACAGAAGGTCTTGAATGAATGTGTAGAAGCTGAGAATTGGCTCAGAGAGAAGAAGCAACAACAAGACTTGCTTCCAAAATTTGCCAACCCCGTCCTCTTGTCAGCTGATATAAGAAAAAAAGCTGAGGCTGTCGATAGGTCCTGTAAGCCGATCATGACGAAACCAAAACCGAAGCCGGCCAAGCCAGCTACTCCAGAAACACCAACAACTCCACCTCCTCAGGAAGGTGAGCAGCAGCAACAACCAGAACAGCAACCTCAGGAGGATGCTAATGCCGGTAGTAATGACAATGCAGGGGACAATGGTAATCAAGTCCCACCAGTCTCTGGCGAACCAATGGAGACTGACAAATCAGAGAACACAGGCTCAGCCTAA
Protein sequence

>Msa0185280

MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGKKFADPELQRDLKSLPFNVTEGPDGYPLIHARYLGESREFTATQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPVYFTDLQRRSVLDAATIAGLHPLHLIHETTATALAYGIYKTDLPENEWLNVAFVDVGHASMQVCIAGFKKGQLQVLSHSYDRSLGGRDFDEALFHHFAAKFKEEYKIDVYQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGFIKRDDFEQLSLPILERVKGPLEKALAEAGLTVENIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGAALQCAILSPTFKVREFQVNESFPFSVSLSWKSSGSDAPDSESDNKQSTIVFPKGNPIPSSKVLTFFRTGTFSVDVQCHDLSETPTKISTYTIGPFQTKNGDKGKVKAKVRLNLHGIVSVESATLFEEEETEVPVTKESAEENAKMETDEAPADAAAPPPSSNDNDVNMQDAKVTADTPGAENGMPEAGDKPVQMDTDTKVEAPKKKVKKTNIPVAEVVYGAMATVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVVASERDEFITKLQEVEDWLYEDGEDETKGVYNAKLEELKKQGDPIEERYKEYSDRGEVIDQLIYCIKSYREAAMSNDPKFDHIDIAEKQKVLNECVEAENWLREKKQQQDLLPKFANPVLLSADIRKKAEAVDRSCKPIMTKPKPKPAKPATPETPTTPPPQEGEQQQQPEQQPQEDANAGSNDNAGDNGNQVPPVSGEPMETDKSENTGSA*