AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0315680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 262 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTACTTCCAAGGTTAATT+TGG 0.111458 2_4:+12160749 Msa0315680:three_prime_UTR
CCGTTAGGTTTGAATATTTC+AGG 0.147372 2_4:+12159332 Msa0315680:three_prime_UTR
AGATTAAAACTAGCACTATT+TGG 0.183352 2_4:+12161695 Msa0315680:three_prime_UTR
TCAAGAATTGGGATATTAAA+TGG 0.205351 2_4:+12160403 Msa0315680:three_prime_UTR
ATCCACGGAAGGGTGAAATT+TGG 0.210229 2_4:+12161207 Msa0315680:three_prime_UTR
TTAATCTGACCATAGTATTT+TGG 0.222364 2_4:-12160960 None:intergenic
TGAAATTTGGGGATTGTATA+GGG 0.227079 2_4:+12161220 Msa0315680:three_prime_UTR
CCAACTCAGCAGGGGCTTAA+TGG 0.229078 2_4:+12159271 Msa0315680:three_prime_UTR
TCCCATCTAATAACTTTCTT+AGG 0.239915 2_4:-12161047 None:intergenic
GATCAGAATGGTTTGGCTTC+TGG 0.249018 2_4:+12159844 Msa0315680:three_prime_UTR
CTTATGATGATACTCTTTCT+TGG 0.250770 2_4:-12159545 None:intergenic
AAAGAGGAATGTTTCGCTTC+TGG 0.254433 2_4:+12160087 Msa0315680:three_prime_UTR
GCAGAAATCTGAGAGGCTTC+TGG 0.266113 2_4:+12161483 Msa0315680:three_prime_UTR
AGCAATATCCTTGGCCCTTA+AGG 0.267509 2_4:-12158750 None:intergenic
TCCACGGAAGGGTGAAATTT+GGG 0.269923 2_4:+12161208 Msa0315680:three_prime_UTR
GAACTTGAACACTGCTTGTT+TGG 0.281217 2_4:+12156718 Msa0315680:CDS
GATTACTCTTCCTGATGATT+TGG 0.287879 2_4:+12160713 Msa0315680:three_prime_UTR
GTGAAATTTGGGGATTGTAT+AGG 0.292252 2_4:+12161219 Msa0315680:three_prime_UTR
ATTATCTCAGCAAGGAATAA+TGG 0.293308 2_4:+12161534 Msa0315680:three_prime_UTR
CATCCACTCCAAACCCTTCC+AGG 0.296798 2_4:+12156393 Msa0315680:CDS
ATTATTCCTTGCTGAGATAA+TGG 0.300567 2_4:-12161532 None:intergenic
GATTCGGAGTATTGTTCTTC+TGG 0.300900 2_4:-12159468 None:intergenic
CTGCGCTCCTCTTCGTCATC+TGG 0.301755 2_4:-12160222 None:intergenic
AATTCAACTCGGCAAGCTTT+TGG 0.307178 2_4:+12159445 Msa0315680:three_prime_UTR
GGAAGCTCAAAGAGTTCTTT+TGG 0.311227 2_4:+12159069 Msa0315680:three_prime_UTR
AGTTTGAGGCGGGCCAGATT+TGG 0.314911 2_4:+12160910 Msa0315680:three_prime_UTR
AAATATAGATGTGAAAATTA+AGG 0.320750 2_4:+12159930 Msa0315680:three_prime_UTR
TAATTTATCTTACTGATTGC+TGG 0.321072 2_4:+12161021 Msa0315680:three_prime_UTR
GTTTCGCTTCTGGGCAGATA+TGG 0.321667 2_4:+12160097 Msa0315680:three_prime_UTR
TTGGGATATTAAATGGTATA+TGG 0.323572 2_4:+12160410 Msa0315680:three_prime_UTR
GGATATTGCTGAAAAGAAAA+TGG 0.333749 2_4:+12158763 Msa0315680:three_prime_UTR
GAATGGTTTGGCTTCTGGTC+TGG 0.339378 2_4:+12159849 Msa0315680:three_prime_UTR
TACCTAAGAAAGTTATTAGA+TGG 0.342918 2_4:+12161045 Msa0315680:three_prime_UTR
AAGAGGAATGTTTCGCTTCT+GGG 0.343632 2_4:+12160088 Msa0315680:three_prime_UTR
ATCTGAATGATTTGTTGATT+TGG 0.354595 2_4:-12160016 None:intergenic
ACCAACACAACCTCTTTAAC+AGG 0.355928 2_4:-12161783 None:intergenic
CAGAATGATAGTGGCAATAT+AGG 0.356181 2_4:+12156256 Msa0315680:CDS
TTGATCAAAGCATAGAATCT+AGG 0.361416 2_4:-12160147 None:intergenic
CTCTGCTGAGCAGAAATTAC+TGG 0.362025 2_4:+12158892 Msa0315680:three_prime_UTR
ACAGTCCTCGCATTCAGATT+TGG 0.362364 2_4:-12158623 None:intergenic
GAAGCTGCATTTAAGCTGAT+TGG 0.364130 2_4:+12159046 Msa0315680:three_prime_UTR
ATCTCATCAGAAGTATGATT+TGG 0.365143 2_4:+12160440 Msa0315680:three_prime_UTR
TTCCTCTTTCTCTTTCCATC+TGG 0.368177 2_4:-12159598 None:intergenic
AGGATTTATGTTTGGGAAAA+CGG 0.372107 2_4:-12159221 None:intergenic
GTCACTTCCATTCTCCTTGT+AGG 0.372842 2_4:-12159770 None:intergenic
CTCACGGAAACCTTCAAAAC+AGG 0.373315 2_4:+12159801 Msa0315680:three_prime_UTR
GTTTGAGGCGGGCCAGATTT+GGG 0.373748 2_4:+12160911 Msa0315680:three_prime_UTR
AATAGATGGCATGGCAGGTT+TGG 0.375145 2_4:-12159143 None:intergenic
TGCTGTCATAACTCATAATC+AGG 0.376227 2_4:+12158686 Msa0315680:three_prime_UTR
AGAGGAGCGCAGGTGGGTTA+AGG 0.376360 2_4:+12160233 Msa0315680:three_prime_UTR
GAACATTGGTTGATCTTTAG+TGG 0.377445 2_4:-12160304 None:intergenic
TCTTCCATCGGCAAGGATAT+AGG 0.378977 2_4:-12160690 None:intergenic
GATTAAAACTAGCACTATTT+GGG 0.379481 2_4:+12161696 Msa0315680:three_prime_UTR
AAGCTGCATTTAAGCTGATT+GGG 0.381476 2_4:+12159047 Msa0315680:three_prime_UTR
TTGTTATTAGTAGTACTCTT+AGG 0.381705 2_4:-12156289 None:intergenic
TGAACGAACCTGGAAGGGTT+TGG 0.382004 2_4:-12156401 None:intergenic
CCATTAAGCCCCTGCTGAGT+TGG 0.382613 2_4:-12159271 None:intergenic
GTCTAAGAAGCCAACTCAGC+AGG 0.385465 2_4:+12159261 Msa0315680:three_prime_UTR
CACCATAAAATGCCCAAATC+TGG 0.388005 2_4:-12160923 None:intergenic
GCAATAAAGAAGAGGCCTTA+AGG 0.393138 2_4:+12158735 Msa0315680:three_prime_UTR
TGCCGAGTTGAATTAGTTGC+CGG 0.394141 2_4:-12159436 None:intergenic
TCCTCTTCGTCATCTGGATC+TGG 0.395746 2_4:-12160216 None:intergenic
CAGAAATCTGAGAGGCTTCT+GGG 0.401330 2_4:+12161484 Msa0315680:three_prime_UTR
GACGAACTTCCAAAATACTA+TGG 0.401455 2_4:+12160951 Msa0315680:three_prime_UTR
GGATTTATGTTTGGGAAAAC+GGG 0.403433 2_4:-12159220 None:intergenic
TGTTGAGGAGGATTTATGTT+TGG 0.407863 2_4:-12159229 None:intergenic
TCAGAAACTATATCCTGATT+TGG 0.408301 2_4:+12158829 Msa0315680:three_prime_UTR
CATAACTCATAATCAGGCTT+TGG 0.409499 2_4:+12158692 Msa0315680:three_prime_UTR
AGAAAGAAAACGTGCTTGTA+AGG 0.409928 2_4:-12156351 None:intergenic
CAATAAAGAAGAGGCCTTAA+GGG 0.410268 2_4:+12158736 Msa0315680:three_prime_UTR
TATAGACTCGGAACTTTCAC+TGG 0.413142 2_4:-12159635 None:intergenic
AGGGAGCAGCATTTGCTAAC+CGG 0.415051 2_4:+12161618 Msa0315680:three_prime_UTR
TGAGCGATATTCTCCAAATC+AGG 0.418029 2_4:-12158842 None:intergenic
TGTTAGAGCTCCATCAGTTT+CGG 0.419365 2_4:+12160821 Msa0315680:three_prime_UTR
GGCTCGTACATTTGCACATA+AGG 0.419479 2_4:+12158805 Msa0315680:three_prime_UTR
TTATCTCAGCAAGGAATAAT+GGG 0.423675 2_4:+12161535 Msa0315680:three_prime_UTR
GGAGGGGACTTATGCATTGT+TGG 0.425957 2_4:+12158653 Msa0315680:three_prime_UTR
GATTTAAGTTGCAGATAACT+TGG 0.429434 2_4:+12160187 Msa0315680:three_prime_UTR
GTAAGTTGTACAGAAATTGC+AGG 0.429808 2_4:+12158596 Msa0315680:intron
GCAAGGAATAATGGGTAAGT+TGG 0.433726 2_4:+12161543 Msa0315680:three_prime_UTR
TTCAGCATCAAATTGATTGA+AGG 0.433817 2_4:-12160874 None:intergenic
TTTAAAGTGTATCCTAGAAA+AGG 0.438839 2_4:+12160363 Msa0315680:three_prime_UTR
GGGAGTATTTGTTTCATACT+TGG 0.438908 2_4:+12160500 Msa0315680:three_prime_UTR
TTGAAAATGCAGAATGATAG+TGG 0.440619 2_4:+12156247 None:intergenic
ATTAAATGCGTTCGGAGGAT+TGG 0.441380 2_4:+12160978 Msa0315680:three_prime_UTR
CGGACATTAGTTTGCATCAC+AGG 0.441445 2_4:-12159196 None:intergenic
GTTGAGGAGGATTTATGTTT+GGG 0.442059 2_4:-12159228 None:intergenic
AGTTGTTCAGATTCTCTCAC+AGG 0.449518 2_4:+12160601 Msa0315680:three_prime_UTR
TCGAGTTCAAAGGCTCCTAC+AGG 0.450890 2_4:-12160666 None:intergenic
AATTTATCTTACTGATTGCT+GGG 0.453279 2_4:+12161022 Msa0315680:three_prime_UTR
CATTCTCCTTGTAGGAAACC+TGG 0.454097 2_4:-12159762 None:intergenic
TTTCGCTTCTGGGCAGATAT+GGG 0.454800 2_4:+12160098 Msa0315680:three_prime_UTR
TCCTTCAGTTCCAAATCATC+AGG 0.456260 2_4:-12160723 None:intergenic
GTTCTACCTGCCTGTTAAAG+AGG 0.456691 2_4:+12161773 Msa0315680:three_prime_UTR
CACCAATTCTGTTTCACATC+AGG 0.457196 2_4:+12161142 Msa0315680:three_prime_UTR
CAAATGAACTGTAATTATGC+AGG 0.458818 2_4:-12161732 None:intergenic
TCCTGATGATTTGGAACTGA+AGG 0.462015 2_4:+12160722 Msa0315680:three_prime_UTR
TAGTGCTAAACTGTTTAGCC+AGG 0.464920 2_4:+12161598 Msa0315680:three_prime_UTR
AATGAATGATCAGAATGGTT+TGG 0.466017 2_4:+12159837 Msa0315680:three_prime_UTR
TTAGACTGCTGTTGCTGTTG+AGG 0.468443 2_4:-12159244 None:intergenic
ATCCTAGAAAAGGAGAAACT+TGG 0.468645 2_4:+12160373 Msa0315680:three_prime_UTR
AATTGATTGAAGGAAGGGTC+TGG 0.472960 2_4:-12160864 None:intergenic
TTTGGGGATTGTATAGGGGA+TGG 0.477728 2_4:+12161225 Msa0315680:three_prime_UTR
TCCGAATCACGGTGCTCCTA+AGG 0.479436 2_4:+12159483 Msa0315680:three_prime_UTR
GTTTCTTAATTATTCCATCA+TGG 0.479714 2_4:-12158967 None:intergenic
ACCTTAGGAGCACCGTGATT+CGG 0.481672 2_4:-12159484 None:intergenic
CAAGGAATAATGGGTAAGTT+GGG 0.485033 2_4:+12161544 Msa0315680:three_prime_UTR
ATGGTCAGATTAAATGCGTT+CGG 0.485378 2_4:+12160970 Msa0315680:three_prime_UTR
AGTTATTAGATGGGAAGATA+AGG 0.488752 2_4:+12161055 Msa0315680:three_prime_UTR
AGATGTGAAAATTAAGGAGG+TGG 0.492209 2_4:+12159936 Msa0315680:three_prime_UTR
AGTGAAAGTTCCGAGTCTAT+AGG 0.493626 2_4:+12159637 Msa0315680:three_prime_UTR
AAAGAGTATCATCATAAGAA+AGG 0.494543 2_4:+12159550 Msa0315680:three_prime_UTR
GATGAGAGAAGAATCGAAGA+AGG 0.494568 2_4:-12156374 None:intergenic
TCATCGTATACTTTATGAAA+AGG 0.495949 2_4:+12160329 Msa0315680:three_prime_UTR
AACAGAATTGGTGTTGTTGT+AGG 0.497331 2_4:-12161132 None:intergenic
GCCTGTTAAAGAGGTTGTGT+TGG 0.500583 2_4:+12161782 Msa0315680:three_prime_UTR
CTTCCGTCAGTTTGAAAGCA+GGG 0.503543 2_4:-12161454 None:intergenic
GTTATCTGCAACTTAAATCC+AGG 0.504899 2_4:-12160183 None:intergenic
CTTTGGAATTTAGACTTCGA+TGG 0.506540 2_4:+12158709 Msa0315680:three_prime_UTR
CACCTGATGTGAAACAGAAT+TGG 0.506845 2_4:-12161144 None:intergenic
AACGGGCAGCTCAAAGATAG+AGG 0.509577 2_4:+12159972 Msa0315680:three_prime_UTR
ACCCACCTCATATGCAATGA+AGG 0.510885 2_4:-12159398 None:intergenic
TCATACTTGGCTAAGTTGAA+AGG 0.511550 2_4:+12160513 Msa0315680:three_prime_UTR
AAGCAACTCAGTAGAGGAGA+AGG 0.512454 2_4:+12160776 Msa0315680:three_prime_UTR
CGTTAGGTTTGAATATTTCA+GGG 0.514181 2_4:+12159333 Msa0315680:three_prime_UTR
AGCCAGATGGAAAGAGAAAG+AGG 0.514187 2_4:+12159596 Msa0315680:three_prime_UTR
TTCAAGGGTAAATTAAGTAA+CGG 0.514783 2_4:+12161371 Msa0315680:three_prime_UTR
AAGTCATTGAACTCTGGATC+GGG 0.516861 2_4:-12160051 None:intergenic
TCTCGAATTACGAAGGGAGG+TGG 0.517185 2_4:+12160552 Msa0315680:three_prime_UTR
GACTGCTGTTGCTGTTGAGG+AGG 0.518186 2_4:-12159241 None:intergenic
AGGCTTCTGGGAACTTGATC+CGG 0.521662 2_4:+12161496 Msa0315680:three_prime_UTR
TGATATTTCCCACAAGCACT+TGG 0.523248 2_4:-12160264 None:intergenic
TAAGCCCTTCATTGCATATG+AGG 0.523474 2_4:+12159393 Msa0315680:three_prime_UTR
GAGAAACTGCCAAGTGCTTG+TGG 0.524452 2_4:+12160255 Msa0315680:three_prime_UTR
TTATTTCTGGAGAAGGTAAG+TGG 0.525653 2_4:+12161335 Msa0315680:three_prime_UTR
GTGGGAGGAAAAGAAACAAC+GGG 0.525910 2_4:+12159955 Msa0315680:three_prime_UTR
GGGTCCACAGAGTACAAAAC+CGG 0.526787 2_4:+12159417 Msa0315680:three_prime_UTR
TCGGATTATGTTGAAGGCGC+GGG 0.527387 2_4:+12160480 Msa0315680:three_prime_UTR
TGAGATCCAACACCAACCTT+AGG 0.527546 2_4:-12159499 None:intergenic
CAGGTTTCCTACAAGGAGAA+TGG 0.529926 2_4:+12159763 Msa0315680:three_prime_UTR
TCTCTAGAAGTAGAAACGCC+AGG 0.530087 2_4:-12159706 None:intergenic
TCAATCAATTTGATGCTGAA+AGG 0.532462 2_4:+12160877 Msa0315680:three_prime_UTR
ATCACAGGATTAAAGTTCAC+CGG 0.534280 2_4:-12159181 None:intergenic
CCACGGAAGGGTGAAATTTG+GGG 0.534533 2_4:+12161209 Msa0315680:three_prime_UTR
AAGGTTGGTGTTGGATCTCA+AGG 0.536385 2_4:+12159502 Msa0315680:three_prime_UTR
GGTGCTCCTAAGGTTGGTGT+TGG 0.537663 2_4:+12159493 Msa0315680:three_prime_UTR
GCTTCTTTCCAAATTAACCT+TGG 0.537905 2_4:-12160757 None:intergenic
TCTTCCGTCAGTTTGAAAGC+AGG 0.538427 2_4:-12161455 None:intergenic
TTGTCAAAGTCATTGAACTC+TGG 0.538570 2_4:-12160057 None:intergenic
TCCTAGAAAAGGAGAAACTT+GGG 0.540925 2_4:+12160374 Msa0315680:three_prime_UTR
ATGGAGAGCAAAGATTTCAC+AGG 0.541304 2_4:+12158782 Msa0315680:three_prime_UTR
GATGTGAAAATTAAGGAGGT+GGG 0.541319 2_4:+12159937 Msa0315680:three_prime_UTR
AGATTTGAACGAACCTGGAA+GGG 0.542798 2_4:-12156406 None:intergenic
TCCCATGAAAAGTTTGAGGC+GGG 0.542823 2_4:+12160900 Msa0315680:three_prime_UTR
GAAATTTGGGGATTGTATAG+GGG 0.543940 2_4:+12161221 Msa0315680:three_prime_UTR
GCATCAAATTGATTGAAGGA+AGG 0.544407 2_4:-12160870 None:intergenic
GAGATTTGAACGAACCTGGA+AGG 0.546742 2_4:-12156407 None:intergenic
CATCAAATTGATTGAAGGAA+GGG 0.546925 2_4:-12160869 None:intergenic
AAATGAACTGTAATTATGCA+GGG 0.547127 2_4:-12161731 None:intergenic
CTGTGATGCAAACTAATGTC+CGG 0.547207 2_4:+12159197 Msa0315680:three_prime_UTR
TAATGGTGTGGTACTGCTGC+CGG 0.550049 2_4:-12161515 None:intergenic
AAAGTCATTGAACTCTGGAT+CGG 0.550894 2_4:-12160052 None:intergenic
TGGTGGATTTGTATAGAAGA+AGG 0.553468 2_4:+12156746 Msa0315680:CDS
CGATCCTATATCCTTGCCGA+TGG 0.555561 2_4:+12160686 Msa0315680:three_prime_UTR
CAGCAGGGGCTTAATGGCAG+TGG 0.555761 2_4:+12159277 Msa0315680:three_prime_UTR
ACCTAAGAAAGTTATTAGAT+GGG 0.557163 2_4:+12161046 Msa0315680:three_prime_UTR
CTTTGACAAGGACAAGAAAG+AGG 0.557198 2_4:+12160071 Msa0315680:three_prime_UTR
GGTTAGCAAATGCTGCTCCC+TGG 0.559020 2_4:-12161616 None:intergenic
TCTAAGAAGCCAACTCAGCA+GGG 0.559454 2_4:+12159262 Msa0315680:three_prime_UTR
ATTGATCGCAATGACCATGA+TGG 0.559804 2_4:+12158953 Msa0315680:three_prime_UTR
AAAACACCAGGTTTCCTACA+AGG 0.560797 2_4:+12159756 Msa0315680:three_prime_UTR
GCCCTTCATTGCATATGAGG+TGG 0.561607 2_4:+12159396 Msa0315680:three_prime_UTR
GAGAATCTGAACAACTCAGC+TGG 0.561764 2_4:-12160594 None:intergenic
AGAAACTGCCAAGTGCTTGT+GGG 0.563507 2_4:+12160256 Msa0315680:three_prime_UTR
AATGTCTCTGTAAAGCCAGA+TGG 0.563630 2_4:+12159583 Msa0315680:three_prime_UTR
AAAGATAGAGGAAGCTTCAG+AGG 0.566259 2_4:+12159984 Msa0315680:three_prime_UTR
CCCCAAATTTCACCCTTCCG+TGG 0.567235 2_4:-12161209 None:intergenic
GATTCTGCAACCGAAACTGA+TGG 0.568717 2_4:-12160831 None:intergenic
AGTTGCTCAGATTCTCTCAC+AGG 0.572226 2_4:+12161429 Msa0315680:three_prime_UTR
GTCGGATTATGTTGAAGGCG+CGG 0.572346 2_4:+12160479 Msa0315680:three_prime_UTR
ATATGAAATTTATCCACGGA+AGG 0.572612 2_4:+12161196 Msa0315680:three_prime_UTR
CCTTCGTAATTCGAGAGAAG+AGG 0.575376 2_4:-12160545 None:intergenic
AGCGTCCACGTAGATCTTCA+CGG 0.576823 2_4:+12159731 Msa0315680:three_prime_UTR
GTTGTTCAGATTCTCTCACA+GGG 0.577108 2_4:+12160602 Msa0315680:three_prime_UTR
ATGACGAAGAGGAGCGCAGG+TGG 0.577366 2_4:+12160226 Msa0315680:three_prime_UTR
CCCTTCATTGCATATGAGGT+GGG 0.577708 2_4:+12159397 Msa0315680:three_prime_UTR
CCTGAAATATTCAAACCTAA+CGG 0.578272 2_4:-12159332 None:intergenic
AGTGCTAAACTGTTTAGCCA+GGG 0.584913 2_4:+12161599 Msa0315680:three_prime_UTR
CAGATGACGAAGAGGAGCGC+AGG 0.586014 2_4:+12160223 Msa0315680:three_prime_UTR
ACACAACCTCTTTAACAGGC+AGG 0.587781 2_4:-12161779 None:intergenic
ACTGAAATGAATGATCAGAA+TGG 0.588501 2_4:+12159832 Msa0315680:three_prime_UTR
TTATGTTTGGGAAAACGGGC+CGG 0.588548 2_4:-12159216 None:intergenic
GCCAGATCCAGATGACGAAG+AGG 0.590540 2_4:+12160215 Msa0315680:three_prime_UTR
GGATATAGGATCGAGTTCAA+AGG 0.591968 2_4:-12160676 None:intergenic
ATCAGTGCTGCCTATAGACT+CGG 0.593654 2_4:-12159647 None:intergenic
AGAAAACGTGCTTGTAAGGG+TGG 0.594734 2_4:-12156347 None:intergenic
TTACTGAAGATGCTGATATG+TGG 0.595321 2_4:+12161303 Msa0315680:three_prime_UTR
AGAAGAGGCCTTAAGGGCCA+AGG 0.596768 2_4:+12158742 Msa0315680:three_prime_UTR
CTCTTCTCTCGAATTACGAA+GGG 0.597804 2_4:+12160546 Msa0315680:three_prime_UTR
GAAACCTTCAAAACAGGGAA+AGG 0.598081 2_4:+12159807 Msa0315680:three_prime_UTR
GGAAAGAAGCAACTCAGTAG+AGG 0.598293 2_4:+12160770 Msa0315680:three_prime_UTR
ATGACTGGTCTGGAAAGAGC+AGG 0.598484 2_4:+12160639 Msa0315680:three_prime_UTR
TATAGATGTGAAAATTAAGG+AGG 0.599093 2_4:+12159933 Msa0315680:three_prime_UTR
AGCTGCATTTAAGCTGATTG+GGG 0.602250 2_4:+12159048 Msa0315680:three_prime_UTR
GAAAGAGCAGGCGTCCCTGT+AGG 0.602401 2_4:+12160651 Msa0315680:three_prime_UTR
TTCTCTCGAATTACGAAGGG+AGG 0.602519 2_4:+12160549 Msa0315680:three_prime_UTR
GAAGGATACATCTACTTCCA+AGG 0.604395 2_4:+12160740 Msa0315680:three_prime_UTR
AATCACGGTGCTCCTAAGGT+TGG 0.605145 2_4:+12159487 Msa0315680:three_prime_UTR
TCTGGAAGATGATCAGAAAG+AGG 0.605661 2_4:+12159867 Msa0315680:three_prime_UTR
GTCCCATGAAAAGTTTGAGG+CGG 0.608243 2_4:+12160899 Msa0315680:three_prime_UTR
GTGAGAGAATCTGAGCAACT+CGG 0.610716 2_4:-12161426 None:intergenic
GTAATACTAATGTGGTGGAC+TGG 0.611478 2_4:+12158915 Msa0315680:three_prime_UTR
CCCACCTCATATGCAATGAA+GGG 0.613211 2_4:-12159397 None:intergenic
CTCGAATTACGAAGGGAGGT+GGG 0.613918 2_4:+12160553 Msa0315680:three_prime_UTR
AGGAATATGAAATTTATCCA+CGG 0.614576 2_4:+12161192 Msa0315680:three_prime_UTR
GAAAGAAAACGTGCTTGTAA+GGG 0.614683 2_4:-12156350 None:intergenic
CTCGGTCCTATCGATAGTCA+TGG 0.615174 2_4:-12161408 None:intergenic
AAGGTCCCATGAAAAGTTTG+AGG 0.615424 2_4:+12160896 Msa0315680:three_prime_UTR
TCTGCTGAGCAGAAATTACT+GGG 0.615704 2_4:+12158893 Msa0315680:three_prime_UTR
AGTAATCTCTTCCATCGGCA+AGG 0.617474 2_4:-12160697 None:intergenic
AGCACTAATACAGTGAAACA+AGG 0.618210 2_4:-12161582 None:intergenic
TAGGTGCAGAGCTTACCACT+TGG 0.618861 2_4:-12161113 None:intergenic
GCTGTCCAAATCTGAATGCG+AGG 0.621383 2_4:+12158618 Msa0315680:three_prime_UTR
AATCTGAACAACTCAGCTGG+TGG 0.622075 2_4:-12160591 None:intergenic
GAAGTGACGACGATGACTCA+CGG 0.623679 2_4:+12159785 Msa0315680:three_prime_UTR
AAACTGTGAGTATGACATAG+TGG 0.623986 2_4:+12161277 Msa0315680:three_prime_UTR
TGGAGAGCAAAGATTTCACA+GGG 0.624124 2_4:+12158783 Msa0315680:three_prime_UTR
GCTTGTGGGAAATATCAACT+TGG 0.624831 2_4:+12160270 Msa0315680:three_prime_UTR
CCTCTTCTCTCGAATTACGA+AGG 0.625976 2_4:+12160545 Msa0315680:three_prime_UTR
ATTACTGGGTAATACTAATG+TGG 0.626275 2_4:+12158907 Msa0315680:three_prime_UTR
GTCAGATTAAATGCGTTCGG+AGG 0.627109 2_4:+12160973 Msa0315680:three_prime_UTR
TTCAAACTGACGGAAGAACA+TGG 0.627670 2_4:+12161461 Msa0315680:three_prime_UTR
AGATGACCATGACTATCGAT+AGG 0.630507 2_4:+12161402 Msa0315680:three_prime_UTR
AAGAACAATACTCCGAATCA+CGG 0.631389 2_4:+12159472 Msa0315680:three_prime_UTR
GATGGATTGCAATAAAGAAG+AGG 0.636257 2_4:+12158727 Msa0315680:three_prime_UTR
ACTGGGTAATACTAATGTGG+TGG 0.636662 2_4:+12158910 Msa0315680:three_prime_UTR
GTGAAAATTAAGGAGGTGGG+AGG 0.637325 2_4:+12159940 Msa0315680:three_prime_UTR
TATGAAATTTATCCACGGAA+GGG 0.639556 2_4:+12161197 Msa0315680:three_prime_UTR
CGAGTTCAAAGGCTCCTACA+GGG 0.645467 2_4:-12160665 None:intergenic
GATCCCTGCTTTCAAACTGA+CGG 0.646604 2_4:+12161451 Msa0315680:three_prime_UTR
ACCACACCATTATCTCAGCA+AGG 0.646629 2_4:+12161526 Msa0315680:three_prime_UTR
AGTATACGATGAGAGAACAT+TGG 0.647284 2_4:-12160318 None:intergenic
CTAAGAAGCCAACTCAGCAG+GGG 0.647584 2_4:+12159263 Msa0315680:three_prime_UTR
GGAAGAGTAATCTCTTCCAT+CGG 0.651816 2_4:-12160702 None:intergenic
AACCGGCAACTAATTCAACT+CGG 0.654528 2_4:+12159434 Msa0315680:three_prime_UTR
AAGGGTAAATTAAGTAACGG+AGG 0.655997 2_4:+12161374 Msa0315680:three_prime_UTR
GCTGTTTATGATGATACAGA+TGG 0.656316 2_4:+12160120 Msa0315680:three_prime_UTR
TGACGAAGAGGAGCGCAGGT+GGG 0.660160 2_4:+12160227 Msa0315680:three_prime_UTR
TAGTGCTGTTCGAAACAACA+AGG 0.661852 2_4:+12161172 Msa0315680:three_prime_UTR
GAACCTGGAAGGGTTTGGAG+TGG 0.664704 2_4:-12156396 None:intergenic
AAGGATATGATCATTTCCTG+TGG 0.671661 2_4:+12161074 Msa0315680:three_prime_UTR
GCAGGTAGAACAACAAACAC+AGG 0.673725 2_4:-12161761 None:intergenic
GGTGGGAGGAAAAGAAACAA+CGG 0.678584 2_4:+12159954 Msa0315680:three_prime_UTR
AGAGTTCAATGACTTTGACA+AGG 0.684191 2_4:+12160059 Msa0315680:three_prime_UTR
TCACGGAAACCTTCAAAACA+GGG 0.685759 2_4:+12159802 Msa0315680:three_prime_UTR
AATGAACTGTAATTATGCAG+GGG 0.687472 2_4:-12161730 None:intergenic
GATACACTTTAAAAGTAGAG+CGG 0.692073 2_4:-12160353 None:intergenic
AAGGTGATTTGTATGCTAAG+AGG 0.700453 2_4:+12159521 Msa0315680:three_prime_UTR
AGATTTAAAATCAATCCAAG+TGG 0.713999 2_4:+12161098 Msa0315680:three_prime_UTR
TCCTTGCTGAGATAATGGTG+TGG 0.715462 2_4:-12161527 None:intergenic
GAACATGGCAGAAATCTGAG+AGG 0.745585 2_4:+12161476 Msa0315680:three_prime_UTR
GGAGAGCAAAGATTTCACAG+GGG 0.834919 2_4:+12158784 Msa0315680:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAAAAAAAAAAAAACTTTT+AGG - chr2_4:12161659-12161678 None:intergenic 10.0%
!! ATTTGTAAGATACAAATTAT+AGG - chr2_4:12156515-12156534 None:intergenic 15.0%
!! TGTTAATTTCAGAATAAATT+AGG + chr2_4:12156653-12156672 Msa0315680:intron 15.0%
!! GTTAATTTCAGAATAAATTA+GGG + chr2_4:12156654-12156673 Msa0315680:intron 15.0%
!!! TTTAACTGTTAAGAATTTTT+AGG + chr2_4:12156869-12156888 Msa0315680:intron 15.0%
!!! TTTAACTGTTAAGAATTTTT+AGG + chr2_4:12156869-12156888 Msa0315680:intron 15.0%
!! ATTTAATTCCTCAATTAAAA+AGG + chr2_4:12157313-12157332 Msa0315680:intron 15.0%
!! CTTGTTTATAAAATCTAAAT+TGG + chr2_4:12157559-12157578 Msa0315680:intron 15.0%
!!! AGAAAGATTAAAATTTTAGT+GGG + chr2_4:12157865-12157884 Msa0315680:intron 15.0%
!!! AATTTATTTCTTATTTGTGT+GGG - chr2_4:12158244-12158263 None:intergenic 15.0%
!!! AAATTTATTTCTTATTTGTG+TGG - chr2_4:12158245-12158264 None:intergenic 15.0%
!!! TTTTATATCTTATAAAAGGT+AGG - chr2_4:12158356-12158375 None:intergenic 15.0%
!! AAACATAAAGTTTATGAATA+AGG - chr2_4:12158505-12158524 None:intergenic 15.0%
!! AAATATAGATGTGAAAATTA+AGG + chr2_4:12159930-12159949 Msa0315680:three_prime_UTR 15.0%
!! AGTAAGAGTGAAAAATTAAA+CGG - chr2_4:12156462-12156481 None:intergenic 20.0%
!!! TAAAGGTAGTTTTTTTTGTA+TGG + chr2_4:12156594-12156613 Msa0315680:intron 20.0%
!!! AAAGGTAGTTTTTTTTGTAT+GGG + chr2_4:12156595-12156614 Msa0315680:intron 20.0%
!!! TTCAATTTTTTCTTTCTTTC+AGG + chr2_4:12156690-12156709 Msa0315680:intron 20.0%
!!! GTTATTTTAACTTATTACTG+TGG + chr2_4:12157581-12157600 Msa0315680:intron 20.0%
!! TTTCTCAATATATACACATA+GGG - chr2_4:12157850-12157869 None:intergenic 20.0%
!!! GAGAAAGATTAAAATTTTAG+TGG + chr2_4:12157864-12157883 Msa0315680:intron 20.0%
!!! GAAAGATTAAAATTTTAGTG+GGG + chr2_4:12157866-12157885 Msa0315680:intron 20.0%
!! CTAACTAAAAAATCAAATGA+AGG - chr2_4:12157964-12157983 None:intergenic 20.0%
!!! ATTTATTTCTTATTTGTGTG+GGG - chr2_4:12158243-12158262 None:intergenic 20.0%
!! AAATAAATTTCAGTGAAAAG+AGG + chr2_4:12158255-12158274 Msa0315680:intron 20.0%
!!! AGGAAGAAAATAGTTTATTT+TGG + chr2_4:12158275-12158294 Msa0315680:intron 20.0%
!! TTGTTATTAGTAGTACTCTT+AGG - chr2_4:12156292-12156311 None:intergenic 25.0%
! GTAAGAGTGAAAAATTAAAC+GGG - chr2_4:12156461-12156480 None:intergenic 25.0%
!! TTTCACTCTTACTGAATTTT+AGG + chr2_4:12156469-12156488 Msa0315680:intron 25.0%
!! TTCACTCTTACTGAATTTTA+GGG + chr2_4:12156470-12156489 Msa0315680:intron 25.0%
!!! CGTTTTTTCTTTAGTTGTAA+AGG + chr2_4:12156577-12156596 Msa0315680:intron 25.0%
!!! TTTTTCTTTCTTTCAGGTTT+CGG + chr2_4:12156696-12156715 Msa0315680:intron 25.0%
!!! AATGAATTTTTAGACTGTGT+TGG + chr2_4:12156805-12156824 Msa0315680:intron 25.0%
! TTGTGTTTATAGATTTGTGA+TGG + chr2_4:12156832-12156851 Msa0315680:intron 25.0%
!!! AATGATTTTTTAGACTGTGT+TGG + chr2_4:12156937-12156956 Msa0315680:intron 25.0%
! TTGTGTTTATAGATTTGTGA+TGG + chr2_4:12156832-12156851 Msa0315680:intron 25.0%
!!! TGGATCAAGAAATTTTAAGT+AGG + chr2_4:12157055-12157074 Msa0315680:intron 25.0%
! ACATATCAAATGATAGTAGT+GGG - chr2_4:12157826-12157845 None:intergenic 25.0%
! TTCTCAATATATACACATAG+GGG - chr2_4:12157849-12157868 None:intergenic 25.0%
! CTTTCTCAATATATACACAT+AGG - chr2_4:12157851-12157870 None:intergenic 25.0%
!! GAAAATCAATAGAAGTGTAA+GGG - chr2_4:12158195-12158214 None:intergenic 25.0%
!! AGAAAATCAATAGAAGTGTA+AGG - chr2_4:12158196-12158215 None:intergenic 25.0%
! TCAACCAAAAATTCTCAAAA+AGG - chr2_4:12158559-12158578 None:intergenic 25.0%
! GTTTCTTAATTATTCCATCA+TGG - chr2_4:12158970-12158989 None:intergenic 25.0%
!!! ATTTCAGGGTAGTTTTAAAT+AGG + chr2_4:12159347-12159366 Msa0315680:three_prime_UTR 25.0%
!!! AAAGAGTATCATCATAAGAA+AGG + chr2_4:12159550-12159569 Msa0315680:three_prime_UTR 25.0%
! TATAGATGTGAAAATTAAGG+AGG + chr2_4:12159933-12159952 Msa0315680:three_prime_UTR 25.0%
!!! ATCTGAATGATTTGTTGATT+TGG - chr2_4:12160019-12160038 None:intergenic 25.0%
!!! ATCAAAAAAGTTTTTTCTCC+TGG + chr2_4:12160165-12160184 Msa0315680:three_prime_UTR 25.0%
! TCATCGTATACTTTATGAAA+AGG + chr2_4:12160329-12160348 Msa0315680:three_prime_UTR 25.0%
!! TTTAAAGTGTATCCTAGAAA+AGG + chr2_4:12160363-12160382 Msa0315680:three_prime_UTR 25.0%
! TCAAGAATTGGGATATTAAA+TGG + chr2_4:12160403-12160422 Msa0315680:three_prime_UTR 25.0%
! TTGGGATATTAAATGGTATA+TGG + chr2_4:12160410-12160429 Msa0315680:three_prime_UTR 25.0%
!! TTAATCTGACCATAGTATTT+TGG - chr2_4:12160963-12160982 None:intergenic 25.0%
!! TTACTTGCAACTCAATTTTT+GGG - chr2_4:12161004-12161023 None:intergenic 25.0%
!! ATTACTTGCAACTCAATTTT+TGG - chr2_4:12161005-12161024 None:intergenic 25.0%
!! TAATTTATCTTACTGATTGC+TGG + chr2_4:12161021-12161040 Msa0315680:three_prime_UTR 25.0%
!! AATTTATCTTACTGATTGCT+GGG + chr2_4:12161022-12161041 Msa0315680:three_prime_UTR 25.0%
! TACCTAAGAAAGTTATTAGA+TGG + chr2_4:12161045-12161064 Msa0315680:three_prime_UTR 25.0%
! ACCTAAGAAAGTTATTAGAT+GGG + chr2_4:12161046-12161065 Msa0315680:three_prime_UTR 25.0%
!!! ATTGATTTTAAATCTTCCAC+AGG - chr2_4:12161093-12161112 None:intergenic 25.0%
!! AGATTTAAAATCAATCCAAG+TGG + chr2_4:12161098-12161117 Msa0315680:three_prime_UTR 25.0%
! AGGAATATGAAATTTATCCA+CGG + chr2_4:12161192-12161211 Msa0315680:three_prime_UTR 25.0%
! TTCAAGGGTAAATTAAGTAA+CGG + chr2_4:12161371-12161390 Msa0315680:three_prime_UTR 25.0%
! TAGGTTCAAAAAATGAAATC+CGG - chr2_4:12161640-12161659 None:intergenic 25.0%
! AGATTAAAACTAGCACTATT+TGG + chr2_4:12161695-12161714 Msa0315680:three_prime_UTR 25.0%
! GATTAAAACTAGCACTATTT+GGG + chr2_4:12161696-12161715 Msa0315680:three_prime_UTR 25.0%
! AAATGAACTGTAATTATGCA+GGG - chr2_4:12161734-12161753 None:intergenic 25.0%
! TTATAGATTTGTGATGGTGT+AGG + chr2_4:12156838-12156857 Msa0315680:intron 30.0%
TATAGATTTGTGATGGTTGT+TGG + chr2_4:12156971-12156990 Msa0315680:intron 30.0%
TGTTGCATATATGTTGTAGT+TGG + chr2_4:12157082-12157101 Msa0315680:intron 30.0%
GTTGCATATATGTTGTAGTT+GGG + chr2_4:12157083-12157102 Msa0315680:intron 30.0%
GGGTATCAATAGTACTTATA+CGG + chr2_4:12157103-12157122 Msa0315680:intron 30.0%
GGTATCAATAGTACTTATAC+GGG + chr2_4:12157104-12157123 Msa0315680:intron 30.0%
GTATCAATAGTACTTATACG+GGG + chr2_4:12157105-12157124 Msa0315680:intron 30.0%
TTGTTCATATGTGTGCTATA+CGG + chr2_4:12157248-12157267 Msa0315680:intron 30.0%
! TGAATCTAAAACCGCATATT+TGG - chr2_4:12157427-12157446 None:intergenic 30.0%
AAAAACAGAGAGACTTTAGA+AGG + chr2_4:12157626-12157645 Msa0315680:intron 30.0%
ATAGTAATCATGCAAAAGAG+AGG + chr2_4:12157696-12157715 Msa0315680:intron 30.0%
TAGTAATCATGCAAAAGAGA+GGG + chr2_4:12157697-12157716 Msa0315680:intron 30.0%
GACATATCAAATGATAGTAG+TGG - chr2_4:12157827-12157846 None:intergenic 30.0%
! AAAGTTTTGCCATAGAAAGT+GGG + chr2_4:12157984-12158003 Msa0315680:intron 30.0%
ATCGAAATACTTTGCTCAAT+AGG - chr2_4:12158099-12158118 None:intergenic 30.0%
TTTCAGATTATCAAACCTCT+AGG + chr2_4:12158122-12158141 Msa0315680:intron 30.0%
TTCAGATTATCAAACCTCTA+GGG + chr2_4:12158123-12158142 Msa0315680:intron 30.0%
TCTGTACTTTGTATCTTTGT+TGG + chr2_4:12158213-12158232 Msa0315680:intron 30.0%
TACTTTGTATCTTTGTTGGT+TGG + chr2_4:12158217-12158236 Msa0315680:intron 30.0%
TGAATTCATCAAACACAACA+AGG - chr2_4:12158328-12158347 None:intergenic 30.0%
! TTGTTGTGGATTTTCTGTTT+TGG + chr2_4:12158429-12158448 Msa0315680:intron 30.0%
CCAAAAATTCTCAAAAAGGA+TGG - chr2_4:12158555-12158574 None:intergenic 30.0%
!! CCATCCTTTTTGAGAATTTT+TGG + chr2_4:12158552-12158571 Msa0315680:intron 30.0%
!!! TTGAGAATTTTTGGTTGATG+TGG + chr2_4:12158561-12158580 Msa0315680:intron 30.0%
!!! TGAGAATTTTTGGTTGATGT+GGG + chr2_4:12158562-12158581 Msa0315680:intron 30.0%
! TTTCTTTTCAGCAATATCCT+TGG - chr2_4:12158762-12158781 None:intergenic 30.0%
GGATATTGCTGAAAAGAAAA+TGG + chr2_4:12158763-12158782 Msa0315680:three_prime_UTR 30.0%
TCAGAAACTATATCCTGATT+TGG + chr2_4:12158829-12158848 Msa0315680:three_prime_UTR 30.0%
ATTACTGGGTAATACTAATG+TGG + chr2_4:12158907-12158926 Msa0315680:three_prime_UTR 30.0%
AGGATTTATGTTTGGGAAAA+CGG - chr2_4:12159224-12159243 None:intergenic 30.0%
CCTGAAATATTCAAACCTAA+CGG - chr2_4:12159335-12159354 None:intergenic 30.0%
CGTTAGGTTTGAATATTTCA+GGG + chr2_4:12159333-12159352 Msa0315680:three_prime_UTR 30.0%
CTTATGATGATACTCTTTCT+TGG - chr2_4:12159548-12159567 None:intergenic 30.0%
! GATACATTTTCTGACAACAA+TGG + chr2_4:12159679-12159698 Msa0315680:three_prime_UTR 30.0%
ACTGAAATGAATGATCAGAA+TGG + chr2_4:12159832-12159851 Msa0315680:three_prime_UTR 30.0%
AATGAATGATCAGAATGGTT+TGG + chr2_4:12159837-12159856 Msa0315680:three_prime_UTR 30.0%
TTGATCAAAGCATAGAATCT+AGG - chr2_4:12160150-12160169 None:intergenic 30.0%
!! GATTTAAGTTGCAGATAACT+TGG + chr2_4:12160187-12160206 Msa0315680:three_prime_UTR 30.0%
! GATACACTTTAAAAGTAGAG+CGG - chr2_4:12160356-12160375 None:intergenic 30.0%
! ATCTCATCAGAAGTATGATT+TGG + chr2_4:12160440-12160459 Msa0315680:three_prime_UTR 30.0%
!!! GGAATTTGTTGAAGTTTTGT+CGG + chr2_4:12160461-12160480 Msa0315680:three_prime_UTR 30.0%
!!! GTTCCATCTTTTAAAATGAC+TGG + chr2_4:12160624-12160643 Msa0315680:three_prime_UTR 30.0%
!! AGACCAGTCATTTTAAAAGA+TGG - chr2_4:12160630-12160649 None:intergenic 30.0%
!!! ATCTTTTAAAATGACTGGTC+TGG + chr2_4:12160629-12160648 Msa0315680:three_prime_UTR 30.0%
ATCTACTTCCAAGGTTAATT+TGG + chr2_4:12160749-12160768 Msa0315680:three_prime_UTR 30.0%
CATCAAATTGATTGAAGGAA+GGG - chr2_4:12160872-12160891 None:intergenic 30.0%
TTCAGCATCAAATTGATTGA+AGG - chr2_4:12160877-12160896 None:intergenic 30.0%
TCAATCAATTTGATGCTGAA+AGG + chr2_4:12160877-12160896 Msa0315680:three_prime_UTR 30.0%
TCCCATCTAATAACTTTCTT+AGG - chr2_4:12161050-12161069 None:intergenic 30.0%
AGTTATTAGATGGGAAGATA+AGG + chr2_4:12161055-12161074 Msa0315680:three_prime_UTR 30.0%
ATATGAAATTTATCCACGGA+AGG + chr2_4:12161196-12161215 Msa0315680:three_prime_UTR 30.0%
TATGAAATTTATCCACGGAA+GGG + chr2_4:12161197-12161216 Msa0315680:three_prime_UTR 30.0%
TGAAATTTGGGGATTGTATA+GGG + chr2_4:12161220-12161239 Msa0315680:three_prime_UTR 30.0%
!!! AGATGTTTTATTTCTGGAGA+AGG + chr2_4:12161328-12161347 Msa0315680:three_prime_UTR 30.0%
ATTATTCCTTGCTGAGATAA+TGG - chr2_4:12161535-12161554 None:intergenic 30.0%
ATTATCTCAGCAAGGAATAA+TGG + chr2_4:12161534-12161553 Msa0315680:three_prime_UTR 30.0%
TTATCTCAGCAAGGAATAAT+GGG + chr2_4:12161535-12161554 Msa0315680:three_prime_UTR 30.0%
AATGAACTGTAATTATGCAG+GGG - chr2_4:12161733-12161752 None:intergenic 30.0%
CAAATGAACTGTAATTATGC+AGG - chr2_4:12161735-12161754 None:intergenic 30.0%
!! CAGAATGATAGTGGCAATAT+AGG + chr2_4:12156256-12156275 Msa0315680:CDS 35.0%
GAAAGAAAACGTGCTTGTAA+GGG - chr2_4:12156353-12156372 None:intergenic 35.0%
AGAAAGAAAACGTGCTTGTA+AGG - chr2_4:12156354-12156373 None:intergenic 35.0%
AAAAGAGATTTGAACGAACC+TGG - chr2_4:12156414-12156433 None:intergenic 35.0%
TATTCCTCTTCAAATCAGAG+GGG - chr2_4:12156557-12156576 None:intergenic 35.0%
GTATTCCTCTTCAAATCAGA+GGG - chr2_4:12156558-12156577 None:intergenic 35.0%
!! TGGTGGATTTGTATAGAAGA+AGG + chr2_4:12156746-12156765 Msa0315680:CDS 35.0%
ACGTTGTAGAATTAAGTCAC+TGG + chr2_4:12157035-12157054 Msa0315680:intron 35.0%
TGTTCATATGTGTGCTATAC+GGG + chr2_4:12157249-12157268 Msa0315680:intron 35.0%
TTATCACTCTCGTTGAATGT+CGG + chr2_4:12157360-12157379 Msa0315680:intron 35.0%
CACGTTCTTTACCAAATATG+CGG + chr2_4:12157413-12157432 Msa0315680:intron 35.0%
AAGAAGCAATTATGTAGCAG+TGG - chr2_4:12157511-12157530 None:intergenic 35.0%
AGTAATCATGCAAAAGAGAG+GGG + chr2_4:12157698-12157717 Msa0315680:intron 35.0%
GGTAACAGACAAAAGAAGAA+GGG + chr2_4:12157720-12157739 Msa0315680:intron 35.0%
! GAAAGTTTTGCCATAGAAAG+TGG + chr2_4:12157983-12158002 Msa0315680:intron 35.0%
TCAGATTATCAAACCTCTAG+GGG + chr2_4:12158124-12158143 Msa0315680:intron 35.0%
TACTTATCCAATTCCACATG+TGG + chr2_4:12158393-12158412 Msa0315680:intron 35.0%
GTAAGTTGTACAGAAATTGC+AGG + chr2_4:12158596-12158615 Msa0315680:intron 35.0%
! AATGCGAGGACTGTAATTTT+TGG + chr2_4:12158632-12158651 Msa0315680:three_prime_UTR 35.0%
TGCTGTCATAACTCATAATC+AGG + chr2_4:12158686-12158705 Msa0315680:three_prime_UTR 35.0%
CATAACTCATAATCAGGCTT+TGG + chr2_4:12158692-12158711 Msa0315680:three_prime_UTR 35.0%
!! CTTTGGAATTTAGACTTCGA+TGG + chr2_4:12158709-12158728 Msa0315680:three_prime_UTR 35.0%
!! GATGGATTGCAATAAAGAAG+AGG + chr2_4:12158727-12158746 Msa0315680:three_prime_UTR 35.0%
CAATAAAGAAGAGGCCTTAA+GGG + chr2_4:12158736-12158755 Msa0315680:three_prime_UTR 35.0%
!!! CAAACTTGTTTTTGTCAGGA+TGG - chr2_4:12159018-12159037 None:intergenic 35.0%
AAGCTGCATTTAAGCTGATT+GGG + chr2_4:12159047-12159066 Msa0315680:three_prime_UTR 35.0%
!! CCATGCCATCTATTTTTCAA+CGG + chr2_4:12159152-12159171 Msa0315680:three_prime_UTR 35.0%
ACGTTCCGTTGAAAAATAGA+TGG - chr2_4:12159160-12159179 None:intergenic 35.0%
!! TATTTTTCAACGGAACGTTC+CGG + chr2_4:12159162-12159181 Msa0315680:three_prime_UTR 35.0%
ATCACAGGATTAAAGTTCAC+CGG - chr2_4:12159184-12159203 None:intergenic 35.0%
GGATTTATGTTTGGGAAAAC+GGG - chr2_4:12159223-12159242 None:intergenic 35.0%
GTTGAGGAGGATTTATGTTT+GGG - chr2_4:12159231-12159250 None:intergenic 35.0%
TGTTGAGGAGGATTTATGTT+TGG - chr2_4:12159232-12159251 None:intergenic 35.0%
AGCACATAGTCCAAAAAGTA+GGG - chr2_4:12159303-12159322 None:intergenic 35.0%
CCGTTAGGTTTGAATATTTC+AGG + chr2_4:12159332-12159351 Msa0315680:three_prime_UTR 35.0%
AAGAACAATACTCCGAATCA+CGG + chr2_4:12159472-12159491 Msa0315680:three_prime_UTR 35.0%
! AAGGTGATTTGTATGCTAAG+AGG + chr2_4:12159521-12159540 Msa0315680:three_prime_UTR 35.0%
AGATGTGAAAATTAAGGAGG+TGG + chr2_4:12159936-12159955 Msa0315680:three_prime_UTR 35.0%
GATGTGAAAATTAAGGAGGT+GGG + chr2_4:12159937-12159956 Msa0315680:three_prime_UTR 35.0%
AAAGTCATTGAACTCTGGAT+CGG - chr2_4:12160055-12160074 None:intergenic 35.0%
TTGTCAAAGTCATTGAACTC+TGG - chr2_4:12160060-12160079 None:intergenic 35.0%
AGAGTTCAATGACTTTGACA+AGG + chr2_4:12160059-12160078 Msa0315680:three_prime_UTR 35.0%
GCTGTTTATGATGATACAGA+TGG + chr2_4:12160120-12160139 Msa0315680:three_prime_UTR 35.0%
GTTATCTGCAACTTAAATCC+AGG - chr2_4:12160186-12160205 None:intergenic 35.0%
! GAACATTGGTTGATCTTTAG+TGG - chr2_4:12160307-12160326 None:intergenic 35.0%
AGTATACGATGAGAGAACAT+TGG - chr2_4:12160321-12160340 None:intergenic 35.0%
ATCCTAGAAAAGGAGAAACT+TGG + chr2_4:12160373-12160392 Msa0315680:three_prime_UTR 35.0%
TCCTAGAAAAGGAGAAACTT+GGG + chr2_4:12160374-12160393 Msa0315680:three_prime_UTR 35.0%
!! TTGGGCTCTTTTCAAGAATT+GGG + chr2_4:12160392-12160411 Msa0315680:three_prime_UTR 35.0%
! GTTTTGTCGGATTATGTTGA+AGG + chr2_4:12160474-12160493 Msa0315680:three_prime_UTR 35.0%
!! GGGAGTATTTGTTTCATACT+TGG + chr2_4:12160500-12160519 Msa0315680:three_prime_UTR 35.0%
! TCATACTTGGCTAAGTTGAA+AGG + chr2_4:12160513-12160532 Msa0315680:three_prime_UTR 35.0%
GATTACTCTTCCTGATGATT+TGG + chr2_4:12160713-12160732 Msa0315680:three_prime_UTR 35.0%
GCTTCTTTCCAAATTAACCT+TGG - chr2_4:12160760-12160779 None:intergenic 35.0%
GCATCAAATTGATTGAAGGA+AGG - chr2_4:12160873-12160892 None:intergenic 35.0%
GACGAACTTCCAAAATACTA+TGG + chr2_4:12160951-12160970 Msa0315680:three_prime_UTR 35.0%
ATGGTCAGATTAAATGCGTT+CGG + chr2_4:12160970-12160989 Msa0315680:three_prime_UTR 35.0%
AAGGATATGATCATTTCCTG+TGG + chr2_4:12161074-12161093 Msa0315680:three_prime_UTR 35.0%
!! AACAGAATTGGTGTTGTTGT+AGG - chr2_4:12161135-12161154 None:intergenic 35.0%
GTGAAATTTGGGGATTGTAT+AGG + chr2_4:12161219-12161238 Msa0315680:three_prime_UTR 35.0%
GAAATTTGGGGATTGTATAG+GGG + chr2_4:12161221-12161240 Msa0315680:three_prime_UTR 35.0%
AAACTGTGAGTATGACATAG+TGG + chr2_4:12161277-12161296 Msa0315680:three_prime_UTR 35.0%
TTACTGAAGATGCTGATATG+TGG + chr2_4:12161303-12161322 Msa0315680:three_prime_UTR 35.0%
!!! GTGGACAGATGTTTTATTTC+TGG + chr2_4:12161322-12161341 Msa0315680:three_prime_UTR 35.0%
!! TTATTTCTGGAGAAGGTAAG+TGG + chr2_4:12161335-12161354 Msa0315680:three_prime_UTR 35.0%
! TGGTTACAGTTCAGTTTTCA+AGG + chr2_4:12161355-12161374 Msa0315680:three_prime_UTR 35.0%
! GGTTACAGTTCAGTTTTCAA+GGG + chr2_4:12161356-12161375 Msa0315680:three_prime_UTR 35.0%
AAGGGTAAATTAAGTAACGG+AGG + chr2_4:12161374-12161393 Msa0315680:three_prime_UTR 35.0%
!! CAAGGAATAATGGGTAAGTT+GGG + chr2_4:12161544-12161563 Msa0315680:three_prime_UTR 35.0%
AGCACTAATACAGTGAAACA+AGG - chr2_4:12161585-12161604 None:intergenic 35.0%
GATGAGAGAAGAATCGAAGA+AGG - chr2_4:12156377-12156396 None:intergenic 40.0%
AGATTTGAACGAACCTGGAA+GGG - chr2_4:12156409-12156428 None:intergenic 40.0%
ATTCCTCTTCAAATCAGAGG+GGG - chr2_4:12156556-12156575 None:intergenic 40.0%
CGTATTCCTCTTCAAATCAG+AGG - chr2_4:12156559-12156578 None:intergenic 40.0%
GAACTTGAACACTGCTTGTT+TGG + chr2_4:12156718-12156737 Msa0315680:CDS 40.0%
!!! ACACTGCTTGTTTGGTTTTG+TGG + chr2_4:12156726-12156745 Msa0315680:CDS 40.0%
ACGTTGTAGAATGAAGTCAC+TGG + chr2_4:12156902-12156921 Msa0315680:intron 40.0%
GTTCATATGTGTGCTATACG+GGG + chr2_4:12157250-12157269 Msa0315680:intron 40.0%
TTCATATGTGTGCTATACGG+GGG + chr2_4:12157251-12157270 Msa0315680:intron 40.0%
GGGAGTTAATATGAGAGACT+TGG + chr2_4:12157271-12157290 Msa0315680:intron 40.0%
!! CACACGTGCCTTTTTAATTG+AGG - chr2_4:12157324-12157343 None:intergenic 40.0%
AATGCCTATCACGTCATATG+CGG + chr2_4:12157452-12157471 Msa0315680:intron 40.0%
TTCAGCGGAAAAAATTGGGT+GGG - chr2_4:12157486-12157505 None:intergenic 40.0%
TTTCAGCGGAAAAAATTGGG+TGG - chr2_4:12157487-12157506 None:intergenic 40.0%
GGCTTTCAGCGGAAAAAATT+GGG - chr2_4:12157490-12157509 None:intergenic 40.0%
TGGCTTTCAGCGGAAAAAAT+TGG - chr2_4:12157491-12157510 None:intergenic 40.0%
GTAATCATGCAAAAGAGAGG+GGG + chr2_4:12157699-12157718 Msa0315680:intron 40.0%
GGGTAACAGACAAAAGAAGA+AGG + chr2_4:12157719-12157738 Msa0315680:intron 40.0%
GGGTTAATGTGAGAGATTAG+AGG - chr2_4:12157806-12157825 None:intergenic 40.0%
TACAACGTACCCACTTTCTA+TGG - chr2_4:12157996-12158015 None:intergenic 40.0%
TACGTTGTAAGCTCAATGGA+GGG + chr2_4:12158007-12158026 Msa0315680:intron 40.0%
ACTTACAGTTCGCGTATCAA+GGG + chr2_4:12158035-12158054 Msa0315680:intron 40.0%
TTATCCAATTCCACATGTGG+TGG + chr2_4:12158396-12158415 Msa0315680:intron 40.0%
!! CGAGGACTGTAATTTTTGGA+GGG + chr2_4:12158636-12158655 Msa0315680:three_prime_UTR 40.0%
!! GAGGACTGTAATTTTTGGAG+GGG + chr2_4:12158637-12158656 Msa0315680:three_prime_UTR 40.0%
GCAATAAAGAAGAGGCCTTA+AGG + chr2_4:12158735-12158754 Msa0315680:three_prime_UTR 40.0%
ATGGAGAGCAAAGATTTCAC+AGG + chr2_4:12158782-12158801 Msa0315680:three_prime_UTR 40.0%
TGGAGAGCAAAGATTTCACA+GGG + chr2_4:12158783-12158802 Msa0315680:three_prime_UTR 40.0%
TGAGCGATATTCTCCAAATC+AGG - chr2_4:12158845-12158864 None:intergenic 40.0%
TCTGCTGAGCAGAAATTACT+GGG + chr2_4:12158893-12158912 Msa0315680:three_prime_UTR 40.0%
ACTGGGTAATACTAATGTGG+TGG + chr2_4:12158910-12158929 Msa0315680:three_prime_UTR 40.0%
!! GTAATACTAATGTGGTGGAC+TGG + chr2_4:12158915-12158934 Msa0315680:three_prime_UTR 40.0%
ATTGATCGCAATGACCATGA+TGG + chr2_4:12158953-12158972 Msa0315680:three_prime_UTR 40.0%
!! TGTTTTTGTCAGGATGGAGT+TGG - chr2_4:12159012-12159031 None:intergenic 40.0%
!!! CCAGCAAACTTGTTTTTGTC+AGG - chr2_4:12159022-12159041 None:intergenic 40.0%
CCTGACAAAAACAAGTTTGC+TGG + chr2_4:12159019-12159038 Msa0315680:three_prime_UTR 40.0%
GAAGCTGCATTTAAGCTGAT+TGG + chr2_4:12159046-12159065 Msa0315680:three_prime_UTR 40.0%
AGCTGCATTTAAGCTGATTG+GGG + chr2_4:12159048-12159067 Msa0315680:three_prime_UTR 40.0%
! GGAAGCTCAAAGAGTTCTTT+TGG + chr2_4:12159069-12159088 Msa0315680:three_prime_UTR 40.0%
TGAAAAATAGATGGCATGGC+AGG - chr2_4:12159151-12159170 None:intergenic 40.0%
CCGTTGAAAAATAGATGGCA+TGG - chr2_4:12159155-12159174 None:intergenic 40.0%
CTGTGATGCAAACTAATGTC+CGG + chr2_4:12159197-12159216 Msa0315680:three_prime_UTR 40.0%
GAGCACATAGTCCAAAAAGT+AGG - chr2_4:12159304-12159323 None:intergenic 40.0%
! TGTGCTCATTTTGTTCCGTT+AGG + chr2_4:12159317-12159336 Msa0315680:three_prime_UTR 40.0%
TAAGCCCTTCATTGCATATG+AGG + chr2_4:12159393-12159412 Msa0315680:three_prime_UTR 40.0%
AACCGGCAACTAATTCAACT+CGG + chr2_4:12159434-12159453 Msa0315680:three_prime_UTR 40.0%
! AATTCAACTCGGCAAGCTTT+TGG + chr2_4:12159445-12159464 Msa0315680:three_prime_UTR 40.0%
!! GATTCGGAGTATTGTTCTTC+TGG - chr2_4:12159471-12159490 None:intergenic 40.0%
AATGTCTCTGTAAAGCCAGA+TGG + chr2_4:12159583-12159602 Msa0315680:three_prime_UTR 40.0%
TTCCTCTTTCTCTTTCCATC+TGG - chr2_4:12159601-12159620 None:intergenic 40.0%
TATAGACTCGGAACTTTCAC+TGG - chr2_4:12159638-12159657 None:intergenic 40.0%
AGTGAAAGTTCCGAGTCTAT+AGG + chr2_4:12159637-12159656 Msa0315680:three_prime_UTR 40.0%
! TCTGACAACAATGGTTTTCC+TGG + chr2_4:12159688-12159707 Msa0315680:three_prime_UTR 40.0%
AAAACACCAGGTTTCCTACA+AGG + chr2_4:12159756-12159775 Msa0315680:three_prime_UTR 40.0%
TCACGGAAACCTTCAAAACA+GGG + chr2_4:12159802-12159821 Msa0315680:three_prime_UTR 40.0%
GAAACCTTCAAAACAGGGAA+AGG + chr2_4:12159807-12159826 Msa0315680:three_prime_UTR 40.0%
!! GTTTCCTTTCCCTGTTTTGA+AGG - chr2_4:12159814-12159833 None:intergenic 40.0%
TCTGGAAGATGATCAGAAAG+AGG + chr2_4:12159867-12159886 Msa0315680:three_prime_UTR 40.0%
AAAGATAGAGGAAGCTTCAG+AGG + chr2_4:12159984-12160003 Msa0315680:three_prime_UTR 40.0%
AAGTCATTGAACTCTGGATC+GGG - chr2_4:12160054-12160073 None:intergenic 40.0%
CTTTGACAAGGACAAGAAAG+AGG + chr2_4:12160071-12160090 Msa0315680:three_prime_UTR 40.0%
AAAGAGGAATGTTTCGCTTC+TGG + chr2_4:12160087-12160106 Msa0315680:three_prime_UTR 40.0%
AAGAGGAATGTTTCGCTTCT+GGG + chr2_4:12160088-12160107 Msa0315680:three_prime_UTR 40.0%
TGATATTTCCCACAAGCACT+TGG - chr2_4:12160267-12160286 None:intergenic 40.0%
GCTTGTGGGAAATATCAACT+TGG + chr2_4:12160270-12160289 Msa0315680:three_prime_UTR 40.0%
!! CTTGGGCTCTTTTCAAGAAT+TGG + chr2_4:12160391-12160410 Msa0315680:three_prime_UTR 40.0%
CTCTTCTCTCGAATTACGAA+GGG + chr2_4:12160546-12160565 Msa0315680:three_prime_UTR 40.0%
AGTTGTTCAGATTCTCTCAC+AGG + chr2_4:12160601-12160620 Msa0315680:three_prime_UTR 40.0%
GTTGTTCAGATTCTCTCACA+GGG + chr2_4:12160602-12160621 Msa0315680:three_prime_UTR 40.0%
GGATATAGGATCGAGTTCAA+AGG - chr2_4:12160679-12160698 None:intergenic 40.0%
GGAAGAGTAATCTCTTCCAT+CGG - chr2_4:12160705-12160724 None:intergenic 40.0%
! TCCTGATGATTTGGAACTGA+AGG + chr2_4:12160722-12160741 Msa0315680:three_prime_UTR 40.0%
TCCTTCAGTTCCAAATCATC+AGG - chr2_4:12160726-12160745 None:intergenic 40.0%
GAAGGATACATCTACTTCCA+AGG + chr2_4:12160740-12160759 Msa0315680:three_prime_UTR 40.0%
TGTTAGAGCTCCATCAGTTT+CGG + chr2_4:12160821-12160840 Msa0315680:three_prime_UTR 40.0%
AATTGATTGAAGGAAGGGTC+TGG - chr2_4:12160867-12160886 None:intergenic 40.0%
AAGGTCCCATGAAAAGTTTG+AGG + chr2_4:12160896-12160915 Msa0315680:three_prime_UTR 40.0%
CACCATAAAATGCCCAAATC+TGG - chr2_4:12160926-12160945 None:intergenic 40.0%
!! TTGGGCATTTTATGGTGATG+AGG + chr2_4:12160929-12160948 Msa0315680:three_prime_UTR 40.0%
ATTAAATGCGTTCGGAGGAT+TGG + chr2_4:12160978-12160997 Msa0315680:three_prime_UTR 40.0%
CACCAATTCTGTTTCACATC+AGG + chr2_4:12161142-12161161 Msa0315680:three_prime_UTR 40.0%
CACCTGATGTGAAACAGAAT+TGG - chr2_4:12161147-12161166 None:intergenic 40.0%
! TAGTGCTGTTCGAAACAACA+AGG + chr2_4:12161172-12161191 Msa0315680:three_prime_UTR 40.0%
AGATGACCATGACTATCGAT+AGG + chr2_4:12161402-12161421 Msa0315680:three_prime_UTR 40.0%
TTCAAACTGACGGAAGAACA+TGG + chr2_4:12161461-12161480 Msa0315680:three_prime_UTR 40.0%
!! GCAAGGAATAATGGGTAAGT+TGG + chr2_4:12161543-12161562 Msa0315680:three_prime_UTR 40.0%
TAGTGCTAAACTGTTTAGCC+AGG + chr2_4:12161598-12161617 Msa0315680:three_prime_UTR 40.0%
AGTGCTAAACTGTTTAGCCA+GGG + chr2_4:12161599-12161618 Msa0315680:three_prime_UTR 40.0%
ACCAACACAACCTCTTTAAC+AGG - chr2_4:12161786-12161805 None:intergenic 40.0%
!!! TGTTGGTTTTATGCTGCGTT+TGG + chr2_4:12161799-12161818 Msa0315680:three_prime_UTR 40.0%
AGAAAACGTGCTTGTAAGGG+TGG - chr2_4:12156350-12156369 None:intergenic 45.0%
GAGATTTGAACGAACCTGGA+AGG - chr2_4:12156410-12156429 None:intergenic 45.0%
!!! CTGCTTGTTTGGTTTTGTGG+TGG + chr2_4:12156729-12156748 Msa0315680:CDS 45.0%
GTGTTATCATGCGAGATGAG+AGG + chr2_4:12157146-12157165 Msa0315680:intron 45.0%
TCAGCGGAAAAAATTGGGTG+GGG - chr2_4:12157485-12157504 None:intergenic 45.0%
TATGTAGCAGTGGCTTTCAG+CGG - chr2_4:12157501-12157520 None:intergenic 45.0%
CTTTGCCCCTCTTAGTCATA+TGG + chr2_4:12157918-12157937 Msa0315680:intron 45.0%
CACTGCCATATGACTAAGAG+GGG - chr2_4:12157926-12157945 None:intergenic 45.0%
GCACTGCCATATGACTAAGA+GGG - chr2_4:12157927-12157946 None:intergenic 45.0%
TGGGTACGTTGTAAGCTCAA+TGG + chr2_4:12158003-12158022 Msa0315680:intron 45.0%
GTACGTTGTAAGCTCAATGG+AGG + chr2_4:12158006-12158025 Msa0315680:intron 45.0%
GACTTACAGTTCGCGTATCA+AGG + chr2_4:12158034-12158053 Msa0315680:intron 45.0%
CGCGTATCAAGGGTCATTAT+TGG + chr2_4:12158045-12158064 Msa0315680:intron 45.0%
! GATTATCAAACCTCTAGGGG+TGG + chr2_4:12158127-12158146 Msa0315680:intron 45.0%
TATATCCAATCCACCCCTAG+AGG - chr2_4:12158140-12158159 None:intergenic 45.0%
GCAAAAATGATCACGCGTAC+AGG - chr2_4:12158173-12158192 None:intergenic 45.0%
!! GTGGTCTGCTAAGTTTGTTG+TGG + chr2_4:12158415-12158434 Msa0315680:intron 45.0%
ACAGTCCTCGCATTCAGATT+TGG - chr2_4:12158626-12158645 None:intergenic 45.0%
!! GCGAGGACTGTAATTTTTGG+AGG + chr2_4:12158635-12158654 Msa0315680:three_prime_UTR 45.0%
AGCAATATCCTTGGCCCTTA+AGG - chr2_4:12158753-12158772 None:intergenic 45.0%
GGAGAGCAAAGATTTCACAG+GGG + chr2_4:12158784-12158803 Msa0315680:three_prime_UTR 45.0%
GGCTCGTACATTTGCACATA+AGG + chr2_4:12158805-12158824 Msa0315680:three_prime_UTR 45.0%
CTCTGCTGAGCAGAAATTAC+TGG + chr2_4:12158892-12158911 Msa0315680:three_prime_UTR 45.0%
AATAGATGGCATGGCAGGTT+TGG - chr2_4:12159146-12159165 None:intergenic 45.0%
!! CGGACATTAGTTTGCATCAC+AGG - chr2_4:12159199-12159218 None:intergenic 45.0%
TTATGTTTGGGAAAACGGGC+CGG - chr2_4:12159219-12159238 None:intergenic 45.0%
! TTAGACTGCTGTTGCTGTTG+AGG - chr2_4:12159247-12159266 None:intergenic 45.0%
TCTAAGAAGCCAACTCAGCA+GGG + chr2_4:12159262-12159281 Msa0315680:three_prime_UTR 45.0%
CCCACCTCATATGCAATGAA+GGG - chr2_4:12159400-12159419 None:intergenic 45.0%
CCCTTCATTGCATATGAGGT+GGG + chr2_4:12159397-12159416 Msa0315680:three_prime_UTR 45.0%
ACCCACCTCATATGCAATGA+AGG - chr2_4:12159401-12159420 None:intergenic 45.0%
! TGCCGAGTTGAATTAGTTGC+CGG - chr2_4:12159439-12159458 None:intergenic 45.0%
TGAGATCCAACACCAACCTT+AGG - chr2_4:12159502-12159521 None:intergenic 45.0%
!! AAGGTTGGTGTTGGATCTCA+AGG + chr2_4:12159502-12159521 Msa0315680:three_prime_UTR 45.0%
AGCCAGATGGAAAGAGAAAG+AGG + chr2_4:12159596-12159615 Msa0315680:three_prime_UTR 45.0%
ATCAGTGCTGCCTATAGACT+CGG - chr2_4:12159650-12159669 None:intergenic 45.0%
! TCTCTAGAAGTAGAAACGCC+AGG - chr2_4:12159709-12159728 None:intergenic 45.0%
! TTTTGCCGTGAAGATCTACG+TGG - chr2_4:12159739-12159758 None:intergenic 45.0%
ATCTTCACGGCAAAAACACC+AGG + chr2_4:12159744-12159763 Msa0315680:three_prime_UTR 45.0%
CATTCTCCTTGTAGGAAACC+TGG - chr2_4:12159765-12159784 None:intergenic 45.0%
CAGGTTTCCTACAAGGAGAA+TGG + chr2_4:12159763-12159782 Msa0315680:three_prime_UTR 45.0%
GTCACTTCCATTCTCCTTGT+AGG - chr2_4:12159773-12159792 None:intergenic 45.0%
CTCACGGAAACCTTCAAAAC+AGG + chr2_4:12159801-12159820 Msa0315680:three_prime_UTR 45.0%
! GATCAGAATGGTTTGGCTTC+TGG + chr2_4:12159844-12159863 Msa0315680:three_prime_UTR 45.0%
GTGAAAATTAAGGAGGTGGG+AGG + chr2_4:12159940-12159959 Msa0315680:three_prime_UTR 45.0%
GGTGGGAGGAAAAGAAACAA+CGG + chr2_4:12159954-12159973 Msa0315680:three_prime_UTR 45.0%
GTGGGAGGAAAAGAAACAAC+GGG + chr2_4:12159955-12159974 Msa0315680:three_prime_UTR 45.0%
TTTCGCTTCTGGGCAGATAT+GGG + chr2_4:12160098-12160117 Msa0315680:three_prime_UTR 45.0%
AGAAACTGCCAAGTGCTTGT+GGG + chr2_4:12160256-12160275 Msa0315680:three_prime_UTR 45.0%
! GCCCAAGTTTCTCCTTTTCT+AGG - chr2_4:12160378-12160397 None:intergenic 45.0%
CCTTCGTAATTCGAGAGAAG+AGG - chr2_4:12160548-12160567 None:intergenic 45.0%
CCTCTTCTCTCGAATTACGA+AGG + chr2_4:12160545-12160564 Msa0315680:three_prime_UTR 45.0%
TTCTCTCGAATTACGAAGGG+AGG + chr2_4:12160549-12160568 Msa0315680:three_prime_UTR 45.0%
AATCTGAACAACTCAGCTGG+TGG - chr2_4:12160594-12160613 None:intergenic 45.0%
GAGAATCTGAACAACTCAGC+TGG - chr2_4:12160597-12160616 None:intergenic 45.0%
TCTTCCATCGGCAAGGATAT+AGG - chr2_4:12160693-12160712 None:intergenic 45.0%
AGTAATCTCTTCCATCGGCA+AGG - chr2_4:12160700-12160719 None:intergenic 45.0%
GGAAAGAAGCAACTCAGTAG+AGG + chr2_4:12160770-12160789 Msa0315680:three_prime_UTR 45.0%
AAGCAACTCAGTAGAGGAGA+AGG + chr2_4:12160776-12160795 Msa0315680:three_prime_UTR 45.0%
GATTCTGCAACCGAAACTGA+TGG - chr2_4:12160834-12160853 None:intergenic 45.0%
GTCCCATGAAAAGTTTGAGG+CGG + chr2_4:12160899-12160918 Msa0315680:three_prime_UTR 45.0%
! TCCCATGAAAAGTTTGAGGC+GGG + chr2_4:12160900-12160919 Msa0315680:three_prime_UTR 45.0%
! GGCCAGATTTGGGCATTTTA+TGG + chr2_4:12160921-12160940 Msa0315680:three_prime_UTR 45.0%
GTCAGATTAAATGCGTTCGG+AGG + chr2_4:12160973-12160992 Msa0315680:three_prime_UTR 45.0%
ATCCACGGAAGGGTGAAATT+TGG + chr2_4:12161207-12161226 Msa0315680:three_prime_UTR 45.0%
TCCACGGAAGGGTGAAATTT+GGG + chr2_4:12161208-12161227 Msa0315680:three_prime_UTR 45.0%
TTTGGGGATTGTATAGGGGA+TGG + chr2_4:12161225-12161244 Msa0315680:three_prime_UTR 45.0%
GTGAGAGAATCTGAGCAACT+CGG - chr2_4:12161429-12161448 None:intergenic 45.0%
AGTTGCTCAGATTCTCTCAC+AGG + chr2_4:12161429-12161448 Msa0315680:three_prime_UTR 45.0%
GATCCCTGCTTTCAAACTGA+CGG + chr2_4:12161451-12161470 Msa0315680:three_prime_UTR 45.0%
CTTCCGTCAGTTTGAAAGCA+GGG - chr2_4:12161457-12161476 None:intergenic 45.0%
TCTTCCGTCAGTTTGAAAGC+AGG - chr2_4:12161458-12161477 None:intergenic 45.0%
GAACATGGCAGAAATCTGAG+AGG + chr2_4:12161476-12161495 Msa0315680:three_prime_UTR 45.0%
CAGAAATCTGAGAGGCTTCT+GGG + chr2_4:12161484-12161503 Msa0315680:three_prime_UTR 45.0%
ACCACACCATTATCTCAGCA+AGG + chr2_4:12161526-12161545 Msa0315680:three_prime_UTR 45.0%
! TCCTTGCTGAGATAATGGTG+TGG - chr2_4:12161530-12161549 None:intergenic 45.0%
GCAGGTAGAACAACAAACAC+AGG - chr2_4:12161764-12161783 None:intergenic 45.0%
GTTCTACCTGCCTGTTAAAG+AGG + chr2_4:12161773-12161792 Msa0315680:three_prime_UTR 45.0%
ACACAACCTCTTTAACAGGC+AGG - chr2_4:12161782-12161801 None:intergenic 45.0%
GCCTGTTAAAGAGGTTGTGT+TGG + chr2_4:12161782-12161801 Msa0315680:three_prime_UTR 45.0%
!!! TTTATTTTAATTTTATCTAA+CGG - chr2_4:12157184-12157203 None:intergenic 5.0%
!!! ATTTTTTTATATCTTATAAA+AGG - chr2_4:12158360-12158379 None:intergenic 5.0%
TGAACGAACCTGGAAGGGTT+TGG - chr2_4:12156404-12156423 None:intergenic 50.0%
! CTTCCCCCTCTGATTTGAAG+AGG + chr2_4:12156550-12156569 Msa0315680:intron 50.0%
GGAAAAAATTGGGTGGGGTG+AGG - chr2_4:12157480-12157499 None:intergenic 50.0%
! GAGACTTTAGAAGGCTCTGC+TGG + chr2_4:12157635-12157654 Msa0315680:intron 50.0%
TTCCCTCACTGTGGTACAAG+TGG + chr2_4:12157895-12157914 Msa0315680:intron 50.0%
AGCCACTTGTACCACAGTGA+GGG - chr2_4:12157900-12157919 None:intergenic 50.0%
AAGCCACTTGTACCACAGTG+AGG - chr2_4:12157901-12157920 None:intergenic 50.0%
CGCACTGCCATATGACTAAG+AGG - chr2_4:12157928-12157947 None:intergenic 50.0%
! TCAAACCTCTAGGGGTGGAT+TGG + chr2_4:12158132-12158151 Msa0315680:intron 50.0%
CAGACCACCACATGTGGAAT+TGG - chr2_4:12158403-12158422 None:intergenic 50.0%
ACTTAGCAGACCACCACATG+TGG - chr2_4:12158409-12158428 None:intergenic 50.0%
GCTGTCCAAATCTGAATGCG+AGG + chr2_4:12158618-12158637 Msa0315680:three_prime_UTR 50.0%
GGAGGGGACTTATGCATTGT+TGG + chr2_4:12158653-12158672 Msa0315680:three_prime_UTR 50.0%
GTCTAAGAAGCCAACTCAGC+AGG + chr2_4:12159261-12159280 Msa0315680:three_prime_UTR 50.0%
CTAAGAAGCCAACTCAGCAG+GGG + chr2_4:12159263-12159282 Msa0315680:three_prime_UTR 50.0%
!! ATGGCAGTGGCCCTACTTTT+TGG + chr2_4:12159290-12159309 Msa0315680:three_prime_UTR 50.0%
GCCCTTCATTGCATATGAGG+TGG + chr2_4:12159396-12159415 Msa0315680:three_prime_UTR 50.0%
GGGTCCACAGAGTACAAAAC+CGG + chr2_4:12159417-12159436 Msa0315680:three_prime_UTR 50.0%
!!! GTTGCCGGTTTTGTACTCTG+TGG - chr2_4:12159424-12159443 None:intergenic 50.0%
!! ACCTTAGGAGCACCGTGATT+CGG - chr2_4:12159487-12159506 None:intergenic 50.0%
AATCACGGTGCTCCTAAGGT+TGG + chr2_4:12159487-12159506 Msa0315680:three_prime_UTR 50.0%
AGCGTCCACGTAGATCTTCA+CGG + chr2_4:12159731-12159750 Msa0315680:three_prime_UTR 50.0%
GAAGTGACGACGATGACTCA+CGG + chr2_4:12159785-12159804 Msa0315680:three_prime_UTR 50.0%
! GAATGGTTTGGCTTCTGGTC+TGG + chr2_4:12159849-12159868 Msa0315680:three_prime_UTR 50.0%
AACGGGCAGCTCAAAGATAG+AGG + chr2_4:12159972-12159991 Msa0315680:three_prime_UTR 50.0%
GTTTCGCTTCTGGGCAGATA+TGG + chr2_4:12160097-12160116 Msa0315680:three_prime_UTR 50.0%
TCCTCTTCGTCATCTGGATC+TGG - chr2_4:12160219-12160238 None:intergenic 50.0%
GAGAAACTGCCAAGTGCTTG+TGG + chr2_4:12160255-12160274 Msa0315680:three_prime_UTR 50.0%
GTCGGATTATGTTGAAGGCG+CGG + chr2_4:12160479-12160498 Msa0315680:three_prime_UTR 50.0%
! TCGGATTATGTTGAAGGCGC+GGG + chr2_4:12160480-12160499 Msa0315680:three_prime_UTR 50.0%
TCTCGAATTACGAAGGGAGG+TGG + chr2_4:12160552-12160571 Msa0315680:three_prime_UTR 50.0%
CTCGAATTACGAAGGGAGGT+GGG + chr2_4:12160553-12160572 Msa0315680:three_prime_UTR 50.0%
!! ATGACTGGTCTGGAAAGAGC+AGG + chr2_4:12160639-12160658 Msa0315680:three_prime_UTR 50.0%
CGAGTTCAAAGGCTCCTACA+GGG - chr2_4:12160668-12160687 None:intergenic 50.0%
TCGAGTTCAAAGGCTCCTAC+AGG - chr2_4:12160669-12160688 None:intergenic 50.0%
CGATCCTATATCCTTGCCGA+TGG + chr2_4:12160686-12160705 Msa0315680:three_prime_UTR 50.0%
! GCCCGCCTCAAACTTTTCAT+GGG - chr2_4:12160904-12160923 None:intergenic 50.0%
TAGGTGCAGAGCTTACCACT+TGG - chr2_4:12161116-12161135 None:intergenic 50.0%
CCACGGAAGGGTGAAATTTG+GGG + chr2_4:12161209-12161228 Msa0315680:three_prime_UTR 50.0%
CTCGGTCCTATCGATAGTCA+TGG - chr2_4:12161411-12161430 None:intergenic 50.0%
GCAGAAATCTGAGAGGCTTC+TGG + chr2_4:12161483-12161502 Msa0315680:three_prime_UTR 50.0%
! AGGCTTCTGGGAACTTGATC+CGG + chr2_4:12161496-12161515 Msa0315680:three_prime_UTR 50.0%
TAATGGTGTGGTACTGCTGC+CGG - chr2_4:12161518-12161537 None:intergenic 50.0%
! AGGGAGCAGCATTTGCTAAC+CGG + chr2_4:12161618-12161637 Msa0315680:three_prime_UTR 50.0%
CATCCACTCCAAACCCTTCC+AGG + chr2_4:12156393-12156412 Msa0315680:CDS 55.0%
GAACCTGGAAGGGTTTGGAG+TGG - chr2_4:12156399-12156418 None:intergenic 55.0%
! GGTGCCGCATATGACGTGAT+AGG - chr2_4:12157459-12157478 None:intergenic 55.0%
AGAAGAGGCCTTAAGGGCCA+AGG + chr2_4:12158742-12158761 Msa0315680:three_prime_UTR 55.0%
! GACTGCTGTTGCTGTTGAGG+AGG - chr2_4:12159244-12159263 None:intergenic 55.0%
CCATTAAGCCCCTGCTGAGT+TGG - chr2_4:12159274-12159293 None:intergenic 55.0%
CCAACTCAGCAGGGGCTTAA+TGG + chr2_4:12159271-12159290 Msa0315680:three_prime_UTR 55.0%
TCCGAATCACGGTGCTCCTA+AGG + chr2_4:12159483-12159502 Msa0315680:three_prime_UTR 55.0%
!! GGTGCTCCTAAGGTTGGTGT+TGG + chr2_4:12159493-12159512 Msa0315680:three_prime_UTR 55.0%
GCCAGATCCAGATGACGAAG+AGG + chr2_4:12160215-12160234 Msa0315680:three_prime_UTR 55.0%
! GGCCCGCCTCAAACTTTTCA+TGG - chr2_4:12160905-12160924 None:intergenic 55.0%
! AGTTTGAGGCGGGCCAGATT+TGG + chr2_4:12160910-12160929 Msa0315680:three_prime_UTR 55.0%
! GTTTGAGGCGGGCCAGATTT+GGG + chr2_4:12160911-12160930 Msa0315680:three_prime_UTR 55.0%
CCCCAAATTTCACCCTTCCG+TGG - chr2_4:12161212-12161231 None:intergenic 55.0%
GGTTAGCAAATGCTGCTCCC+TGG - chr2_4:12161619-12161638 None:intergenic 55.0%
CAGCAGGGGCTTAATGGCAG+TGG + chr2_4:12159277-12159296 Msa0315680:three_prime_UTR 60.0%
CTGCGCTCCTCTTCGTCATC+TGG - chr2_4:12160225-12160244 None:intergenic 60.0%
! CAGATGACGAAGAGGAGCGC+AGG + chr2_4:12160223-12160242 Msa0315680:three_prime_UTR 60.0%
! ATGACGAAGAGGAGCGCAGG+TGG + chr2_4:12160226-12160245 Msa0315680:three_prime_UTR 60.0%
! TGACGAAGAGGAGCGCAGGT+GGG + chr2_4:12160227-12160246 Msa0315680:three_prime_UTR 60.0%
!! AGAGGAGCGCAGGTGGGTTA+AGG + chr2_4:12160233-12160252 Msa0315680:three_prime_UTR 60.0%
GAAAGAGCAGGCGTCCCTGT+AGG + chr2_4:12160651-12160670 Msa0315680:three_prime_UTR 60.0%
GGGAGCGAGTTCCCTCACTG+TGG + chr2_4:12157886-12157905 Msa0315680:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 12156253 12161828 12156253 ID=Msa0315680;Name=Msa0315680
chr2_4 mRNA 12156253 12161828 12156253 ID=Msa0315680-mRNA-1;Parent=Msa0315680;Name=Msa0315680-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.66|1|0.5|0.66|3|3227|74
chr2_4 exon 12156253 12156414 12156253 ID=Msa0315680-mRNA-1:exon:4660;Parent=Msa0315680-mRNA-1
chr2_4 exon 12156712 12156781 12156712 ID=Msa0315680-mRNA-1:exon:4661;Parent=Msa0315680-mRNA-1
chr2_4 exon 12158609 12161828 12158609 ID=Msa0315680-mRNA-1:exon:4662;Parent=Msa0315680-mRNA-1
chr2_4 CDS 12156253 12156414 12156253 ID=Msa0315680-mRNA-1:cds;Parent=Msa0315680-mRNA-1
chr2_4 CDS 12156712 12156774 12156712 ID=Msa0315680-mRNA-1:cds;Parent=Msa0315680-mRNA-1
chr2_4 three_prime_UTR 12156775 12156781 12156775 ID=Msa0315680-mRNA-1:three_prime_utr;Parent=Msa0315680-mRNA-1
chr2_4 three_prime_UTR 12158609 12161828 12158609 ID=Msa0315680-mRNA-1:three_prime_utr;Parent=Msa0315680-mRNA-1
Gene Sequence

>Msa0315680

ATGCAGAATGATAGTGGCAATATAGGAAGAAAACAACCTAAGAGTACTACTAATAACAAAAACAATGATATTGAGAAGCTGTTTCTTCAACTCTCCACCCTTACAAGCACGTTTTCTTTCTCCTTCTTCGATTCTTCTCTCATCCACTCCAAACCCTTCCAGGTTTCGGAACTTGAACACTGCTTGTTTGGTTTTGTGGTGGATTTGTATAGAAGAAGGTGTTGA
Protein sequence

>Msa0315680

MQNDSGNIGRKQPKSTTNNKNNDIEKLFLQLSTLTSTFSFSFFDSSLIHSKPFQVSELEHCLFGFVVDLYRRRC*