Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035230 | XP_003625286.1 | 97.175 | 354 | 10 | 0 | 1 | 354 | 1 | 354 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035230 | sp|Q8BK64|AHSA1_MOUSE | 32.394 | 355 | 217 | 7 | 1 | 353 | 1 | 334 | 1.41e-46 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035230 | G7KW94 | 97.175 | 354 | 10 | 0 | 1 | 354 | 1 | 354 | 0.0 | 702 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029630 | Msa1035230 | 0.818617 | 1.785458e-52 | -8.615850e-47 |
| Msa0041690 | Msa1035230 | 0.807995 | 3.849883e-50 | -8.615850e-47 |
| Msa0070430 | Msa1035230 | 0.811112 | 8.237852e-51 | -8.615850e-47 |
| Msa0079920 | Msa1035230 | 0.806397 | 8.393117e-50 | -8.615850e-47 |
| Msa0620230 | Msa1035230 | 0.805585 | 1.243285e-49 | -8.615850e-47 |
| Msa0628420 | Msa1035230 | 0.826311 | 2.908763e-54 | -8.615850e-47 |
| Msa0628500 | Msa1035230 | 0.810371 | 1.191609e-50 | -8.615850e-47 |
| Msa0710270 | Msa1035230 | 0.809968 | 1.455466e-50 | -8.615850e-47 |
| Msa0712560 | Msa1035230 | 0.812682 | 3.748997e-51 | -8.615850e-47 |
| Msa0721230 | Msa1035230 | 0.821838 | 3.262458e-53 | -8.615850e-47 |
| Msa0744100 | Msa1035230 | 0.821007 | 5.074943e-53 | -8.615850e-47 |
| Msa0752700 | Msa1035230 | 0.809471 | 1.861912e-50 | -8.615850e-47 |
| Msa0753460 | Msa1035230 | 0.825949 | 3.545288e-54 | -8.615850e-47 |
| Msa0788120 | Msa1035230 | 0.816350 | 5.787210e-52 | -8.615850e-47 |
| Msa0790400 | Msa1035230 | 0.805114 | 1.560535e-49 | -8.615850e-47 |
| Msa0825270 | Msa1035230 | 0.818274 | 2.134922e-52 | -8.615850e-47 |
| Msa0831100 | Msa1035230 | 0.806120 | 9.595770e-50 | -8.615850e-47 |
| Msa0832700 | Msa1035230 | 0.825726 | 4.004859e-54 | -8.615850e-47 |
| Msa0125450 | Msa1035230 | 0.811843 | 5.714701e-51 | -8.615850e-47 |
| Msa0125540 | Msa1035230 | 0.806940 | 6.443000e-50 | -8.615850e-47 |
| Msa0168090 | Msa1035230 | 0.800953 | 1.131566e-48 | -8.615850e-47 |
| Msa0169610 | Msa1035230 | 0.818801 | 1.621854e-52 | -8.615850e-47 |
| Msa0185280 | Msa1035230 | 0.807646 | 4.566811e-50 | -8.615850e-47 |
| Msa0185400 | Msa1035230 | 0.813204 | 2.880694e-51 | -8.615850e-47 |
| Msa0188690 | Msa1035230 | 0.801172 | 1.020654e-48 | -8.615850e-47 |
| Msa0225620 | Msa1035230 | 0.838796 | 2.324508e-57 | -8.615850e-47 |
| Msa0237200 | Msa1035230 | 0.801706 | 7.933627e-49 | -8.615850e-47 |
| Msa0434770 | Msa1035230 | 0.804778 | 1.834734e-49 | -8.615850e-47 |
| Msa0440510 | Msa1035230 | 0.800240 | 1.581349e-48 | -8.615850e-47 |
| Msa1035230 | Msa1037510 | 0.805263 | 1.452651e-49 | -8.615850e-47 |
| Msa1035230 | Msa1072600 | 0.823646 | 1.238421e-53 | -8.615850e-47 |
| Msa1035230 | Msa1123350 | 0.801010 | 1.101790e-48 | -8.615850e-47 |
| Msa1035230 | Msa1127540 | 0.801274 | 9.727135e-49 | -8.615850e-47 |
| Msa1035230 | Msa1127590 | 0.828563 | 8.387759e-55 | -8.615850e-47 |
| Msa1035230 | Msa1162740 | 0.876807 | 1.040453e-68 | -8.615850e-47 |
| Msa1035230 | Msa1206650 | 0.803517 | 3.356728e-49 | -8.615850e-47 |
| Msa1035230 | Msa1255370 | 0.809542 | 1.796988e-50 | -8.615850e-47 |
| Msa1035230 | Msa1356610 | 0.825568 | 4.367275e-54 | -8.615850e-47 |
| Msa1035230 | Msa1381120 | 0.800740 | 1.250661e-48 | -8.615850e-47 |
| Msa1035230 | Msa1411950 | 0.832145 | 1.117345e-55 | -8.615850e-47 |
| Msa1035230 | Msa1443300 | 0.802479 | 5.501044e-49 | -8.615850e-47 |
| Msa1035230 | Msa1450720 | 0.811720 | 6.079327e-51 | -8.615850e-47 |
| Msa0241830 | Msa1035230 | 0.800415 | 1.456758e-48 | -8.615850e-47 |
| Msa0270210 | Msa1035230 | 0.806254 | 8.994325e-50 | -8.615850e-47 |
| Msa0274970 | Msa1035230 | 0.803222 | 3.863389e-49 | -8.615850e-47 |
| Msa0307850 | Msa1035230 | 0.808529 | 2.962296e-50 | -8.615850e-47 |
| Msa0315680 | Msa1035230 | 0.800418 | 1.455038e-48 | -8.615850e-47 |
| Msa0322900 | Msa1035230 | 0.811255 | 7.670467e-51 | -8.615850e-47 |
| Msa0324240 | Msa1035230 | 0.808221 | 3.444861e-50 | -8.615850e-47 |
| Msa0363060 | Msa1035230 | 0.818296 | 2.111226e-52 | -8.615850e-47 |
| Msa0491000 | Msa1035230 | 0.808390 | 3.170964e-50 | -8.615850e-47 |
| Msa0531250 | Msa1035230 | 0.822122 | 2.804792e-53 | -8.615850e-47 |
| Msa0864420 | Msa1035230 | 0.810750 | 9.867957e-51 | -8.615850e-47 |
| Msa0880450 | Msa1035230 | 0.808415 | 3.131973e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035230 | MtrunA17_Chr7g0258891 | 97.175 | 354 | 10 | 0 | 1 | 354 | 1 | 354 | 0.0 | 702 |
| Msa1035230 | MtrunA17_Chr1g0175701 | 70.141 | 355 | 94 | 4 | 1 | 354 | 1 | 344 | 2.84e-180 | 503 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1035230 | AT3G12050.1 | 69.167 | 360 | 105 | 1 | 1 | 354 | 1 | 360 | 0.0 | 508 |
| Msa1035230 | AT3G12050.2 | 62.222 | 360 | 91 | 2 | 1 | 354 | 1 | 321 | 2.86e-152 | 431 |
Find 138 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGGGAAAGGGGTGATTT+TGG | 0.227052 | 7_1:+70987000 | Msa1035230:CDS |
| TTTGGAGAAGGTTAGGGTTT+GGG | 0.255145 | 7_1:+70987018 | Msa1035230:CDS |
| TAGGGTTTGGGTTGATAGTA+TGG | 0.282053 | 7_1:+70987030 | Msa1035230:CDS |
| TTCGGTTGTGGATGTGGTTT+TGG | 0.283023 | 7_1:-70986520 | None:intergenic |
| ACCTCCAAATCCTCCTTAAC+AGG | 0.344484 | 7_1:-70987064 | None:intergenic |
| TCCGATTGGGAGGAGGATTA+AGG | 0.345883 | 7_1:+70986964 | Msa1035230:CDS |
| AAATCAATCTCACTGTTTCC+TGG | 0.353923 | 7_1:+70986813 | Msa1035230:CDS |
| TGGTCCTGTTAAGGAGGATT+TGG | 0.362861 | 7_1:+70987060 | Msa1035230:CDS |
| GCCGTTGAGGATGGTGAGAT+TGG | 0.362978 | 7_1:-70986696 | None:intergenic |
| GGAGAGAAGGTTGGTGAAGA+AGG | 0.364115 | 7_1:-70986675 | None:intergenic |
| TTGTGCAGAGGTGGAGATTC+GGG | 0.367967 | 7_1:+70987404 | Msa1035230:CDS |
| CGAGGATTAGTAAGGAGGTT+GGG | 0.381108 | 7_1:+70987314 | Msa1035230:CDS |
| AGGGAGTGAAGGGAAGGGTT+TGG | 0.383151 | 7_1:-70986495 | None:intergenic |
| GCAGAATAATGTTAATGTTC+CGG | 0.396349 | 7_1:+70987114 | Msa1035230:CDS |
| GGTTAAGAAGCCGGCGGCTC+AGG | 0.396754 | 7_1:+70987084 | Msa1035230:CDS |
| TGGTGGTTCGGTTGTGGATG+TGG | 0.409392 | 7_1:-70986526 | None:intergenic |
| ATTGTGCAGAGGTGGAGATT+CGG | 0.410427 | 7_1:+70987403 | Msa1035230:CDS |
| CCGATGTACCTGAGGAAGAT+AGG | 0.412013 | 7_1:+70988832 | Msa1035230:CDS |
| CTGATGAGGATCCTGATGTT+AGG | 0.418634 | 7_1:+70986921 | Msa1035230:CDS |
| TGAAGGGAATTCGTTGTTGA+AGG | 0.423056 | 7_1:+70986856 | Msa1035230:CDS |
| GCATTCTCATCAGAAATATA+CGG | 0.424227 | 7_1:-70986899 | None:intergenic |
| AATTCGTTGTTGAAGGTTAA+CGG | 0.425389 | 7_1:+70986863 | Msa1035230:CDS |
| ATCCTTCGCTTCACCTTCCC+AGG | 0.428288 | 7_1:-70986831 | None:intergenic |
| TGCTTCACTGCCTGAGCCGC+CGG | 0.429850 | 7_1:-70987094 | None:intergenic |
| CCCCTTACGGATGTTGATGT+AGG | 0.433756 | 7_1:-70986771 | None:intergenic |
| GAAGAAGAAGGAGAGTAAGA+AGG | 0.437370 | 7_1:+70987186 | Msa1035230:CDS |
| GGCGAGAGGTGGTCCTGTTA+AGG | 0.438118 | 7_1:+70987051 | Msa1035230:CDS |
| AAGAAGAAGGAGAGTAAGAA+GGG | 0.442005 | 7_1:+70987187 | Msa1035230:CDS |
| GGATTTGTTTGAGATATTGA+TGG | 0.445610 | 7_1:+70987255 | Msa1035230:CDS |
| GACGGAGAAGTTTAATTGTC+GGG | 0.459720 | 7_1:+70987228 | Msa1035230:CDS |
| TTGTGAACGTTAGTTCCGTC+TGG | 0.461471 | 7_1:-70986611 | None:intergenic |
| CAGGTACATCGGTATGTGTC+AGG | 0.462088 | 7_1:-70988821 | None:intergenic |
| AGAAGGAGAGTAAGAAGGGA+AGG | 0.462970 | 7_1:+70987191 | Msa1035230:CDS |
| GAAGTTTAATTGTCGGGCGA+AGG | 0.463952 | 7_1:+70987234 | Msa1035230:CDS |
| TCCTGTTAAGGAGGATTTGG+AGG | 0.465113 | 7_1:+70987063 | Msa1035230:CDS |
| CACCGTACGATGGCGAAATA+CGG | 0.466497 | 7_1:+70986554 | Msa1035230:exon |
| GGAAGTTGATTGTGCAGAGG+TGG | 0.472069 | 7_1:+70987395 | Msa1035230:CDS |
| GATTGATGGTGCTCAATCTC+AGG | 0.472231 | 7_1:+70987432 | Msa1035230:CDS |
| ACAACAGTAACTCCTGGTTC+AGG | 0.472906 | 7_1:-70988795 | None:intergenic |
| GAGAATTGGTGGTTCGGTTG+TGG | 0.475163 | 7_1:-70986532 | None:intergenic |
| TCCTTAATCCTCCTCCCAAT+CGG | 0.476371 | 7_1:-70986965 | None:intergenic |
| TTGGTGAGGGAGTGAAGGGA+AGG | 0.478542 | 7_1:-70986501 | None:intergenic |
| TTCTCCTCCTTCTTAACAGA+AGG | 0.482815 | 7_1:-70987166 | None:intergenic |
| GCTGTTGTTGTCACCGTCGC+CGG | 0.485289 | 7_1:-70987133 | None:intergenic |
| ACGGAACTAACGTTCACAAC+TGG | 0.487614 | 7_1:+70986615 | Msa1035230:CDS |
| AGGGTTTGGTTTAAGAAAGA+AGG | 0.488806 | 7_1:-70986481 | None:intergenic |
| TTGGTTTAAGAAAGAAGGGT+TGG | 0.494106 | 7_1:-70986476 | None:intergenic |
| AATCAATCTCACTGTTTCCT+GGG | 0.495075 | 7_1:+70986814 | Msa1035230:CDS |
| CGCCGTATTTCGCCATCGTA+CGG | 0.496501 | 7_1:-70986556 | None:intergenic |
| TACGGTGAGAATTGGTGGTT+CGG | 0.499765 | 7_1:-70986538 | None:intergenic |
| AGGCTTCGCCGGTGAGGCTA+CGG | 0.500973 | 7_1:-70986751 | None:intergenic |
| TAATGCGAGGATTAGTAAGG+AGG | 0.501858 | 7_1:+70987309 | Msa1035230:CDS |
| CAGGGATAATCTTCCCCTTA+CGG | 0.502173 | 7_1:-70986784 | None:intergenic |
| AGGATGCGATGTTTCAGAAA+GGG | 0.504168 | 7_1:+70986984 | Msa1035230:CDS |
| AGATATTGATGGATGAGAAT+AGG | 0.505287 | 7_1:+70987266 | Msa1035230:CDS |
| AGAGGTGGAGATTCGGGAGC+TGG | 0.508858 | 7_1:+70987410 | Msa1035230:CDS |
| GTTGGAAAGGTCTAGAAAGA+AGG | 0.511242 | 7_1:-70986458 | None:intergenic |
| CATCGTACGGTGAGAATTGG+TGG | 0.511307 | 7_1:-70986543 | None:intergenic |
| GAGTAATGCGAGGATTAGTA+AGG | 0.514457 | 7_1:+70987306 | Msa1035230:CDS |
| TAATGTTAATGTTCCGGCGA+CGG | 0.516023 | 7_1:+70987120 | Msa1035230:CDS |
| GAGGATTAGTAAGGAGGTTG+GGG | 0.520662 | 7_1:+70987315 | Msa1035230:CDS |
| ATGGATGAGAATAGGTGGAA+GGG | 0.522678 | 7_1:+70987274 | Msa1035230:CDS |
| CGTAAGGGGAAGATTATCCC+TGG | 0.522864 | 7_1:+70986785 | Msa1035230:CDS |
| CGATGTTTCAGAAAGGGAAA+GGG | 0.525742 | 7_1:+70986990 | Msa1035230:CDS |
| GTTGAAGATGAAAGTCCGAT+TGG | 0.526817 | 7_1:+70986950 | Msa1035230:CDS |
| GGATTTGGAGGTTAAGAAGC+CGG | 0.527030 | 7_1:+70987075 | Msa1035230:CDS |
| GGGTTTGGTTTAAGAAAGAA+GGG | 0.528033 | 7_1:-70986480 | None:intergenic |
| GTCAAGTCCTTCTGTTAAGA+AGG | 0.528667 | 7_1:+70987159 | Msa1035230:CDS |
| TAAGAAGGAGGAGAAGAAGA+AGG | 0.529157 | 7_1:+70987174 | Msa1035230:CDS |
| CTAACGTTCACAACTGGCAC+TGG | 0.530672 | 7_1:+70986621 | Msa1035230:CDS |
| GCGAGGATTAGTAAGGAGGT+TGG | 0.536552 | 7_1:+70987313 | Msa1035230:CDS |
| GATGTTGATGTAGGCTTCGC+CGG | 0.537363 | 7_1:-70986762 | None:intergenic |
| AATCTCACTGTTTCCTGGGA+AGG | 0.538242 | 7_1:+70986818 | Msa1035230:CDS |
| TGTGGTGGAGAACACTGAAA+GGG | 0.538891 | 7_1:+70988955 | Msa1035230:CDS |
| AGATTCGGGAGCTGGATTGA+TGG | 0.538981 | 7_1:+70987418 | Msa1035230:CDS |
| AAGGAAGAATATTGTGATGA+CGG | 0.539210 | 7_1:+70987210 | Msa1035230:CDS |
| TGACGGAGAAGTTTAATTGT+CGG | 0.541011 | 7_1:+70987227 | Msa1035230:CDS |
| TTGAAGATGAAAGTCCGATT+GGG | 0.542765 | 7_1:+70986951 | Msa1035230:CDS |
| TGGTGAGGGAGTGAAGGGAA+GGG | 0.543266 | 7_1:-70986500 | None:intergenic |
| GCGATGTTTCAGAAAGGGAA+AGG | 0.546048 | 7_1:+70986989 | Msa1035230:CDS |
| CGGAGACAAACTGTCTAGAA+TGG | 0.546185 | 7_1:+70986645 | Msa1035230:CDS |
| GGATGGTGAGATTGGAGAGA+AGG | 0.546910 | 7_1:-70986688 | None:intergenic |
| GATGGATGAGAATAGGTGGA+AGG | 0.547723 | 7_1:+70987273 | Msa1035230:CDS |
| GAAAGGTCTAGAAAGAAGGA+TGG | 0.548106 | 7_1:-70986454 | None:intergenic |
| GTTACCTTCGCCGTTGAGGA+TGG | 0.556749 | 7_1:-70986705 | None:intergenic |
| AGAACACTGAAAGGGGATGG+AGG | 0.557325 | 7_1:+70988963 | Msa1035230:CDS |
| CTGTGGTGGAGAACACTGAA+AGG | 0.557979 | 7_1:+70988954 | Msa1035230:CDS |
| AAAGATTAATGGATTCACAT+TGG | 0.558333 | 7_1:+70989088 | Msa1035230:three_prime_UTR |
| TCAACTATAACCCTAACATC+AGG | 0.558454 | 7_1:-70986932 | None:intergenic |
| GAACACTGAAAGGGGATGGA+GGG | 0.559482 | 7_1:+70988964 | Msa1035230:CDS |
| AATACTAACCTATCTTCCTC+AGG | 0.560053 | 7_1:-70988840 | None:intergenic |
| AAGGATGCGATGTTTCAGAA+AGG | 0.560413 | 7_1:+70986983 | Msa1035230:CDS |
| AGCCTACATCAACATCCGTA+AGG | 0.561299 | 7_1:+70986769 | Msa1035230:CDS |
| TATTGATGGATGAGAATAGG+TGG | 0.562657 | 7_1:+70987269 | Msa1035230:CDS |
| AGGTTTACAACAGTAACTCC+TGG | 0.563635 | 7_1:-70988801 | None:intergenic |
| ATGAAAGTCCGATTGGGAGG+AGG | 0.565459 | 7_1:+70986957 | Msa1035230:CDS |
| GGTGAAGCGAAGGATAATGA+AGG | 0.566763 | 7_1:+70986839 | Msa1035230:CDS |
| GCAATGTGGAGTTGCAAGAA+GGG | 0.570659 | 7_1:+70987374 | Msa1035230:CDS |
| TGGAGAACACTGAAAGGGGA+TGG | 0.571952 | 7_1:+70988960 | Msa1035230:CDS |
| TACATTATCTTTATTACTGT+AGG | 0.571983 | 7_1:+70989137 | Msa1035230:three_prime_UTR |
| GGTGAGATTGGAGAGAAGGT+TGG | 0.574769 | 7_1:-70986684 | None:intergenic |
| AGCAATGTGGAGTTGCAAGA+AGG | 0.575330 | 7_1:+70987373 | Msa1035230:CDS |
| TGATGAGGATCCTGATGTTA+GGG | 0.576854 | 7_1:+70986922 | Msa1035230:CDS |
| CTCACCATCCTCAACGGCGA+AGG | 0.582871 | 7_1:+70986701 | Msa1035230:CDS |
| GCCTACATCAACATCCGTAA+GGG | 0.584822 | 7_1:+70986770 | Msa1035230:CDS |
| TCCAATCTCACCATCCTCAA+CGG | 0.585506 | 7_1:+70986695 | Msa1035230:CDS |
| AGAGGTTACCTTCGCCGTTG+AGG | 0.594117 | 7_1:-70986709 | None:intergenic |
| TGAGATTGATTTCATACCCA+GGG | 0.595629 | 7_1:-70986802 | None:intergenic |
| CCTATCTTCCTCAGGTACAT+CGG | 0.599844 | 7_1:-70988832 | None:intergenic |
| ATCGTTGAAGAACGTCCAGA+CGG | 0.600203 | 7_1:+70986596 | Msa1035230:CDS |
| TTAAGAAAGAAGGGTTGGAA+AGG | 0.603291 | 7_1:-70986471 | None:intergenic |
| TGGGTTGATAGTATGGCGAG+AGG | 0.616427 | 7_1:+70987037 | Msa1035230:CDS |
| CACCAATTCTCACCGTACGA+TGG | 0.617366 | 7_1:+70986544 | Msa1035230:exon |
| AAGATGAAAGTCCGATTGGG+AGG | 0.618852 | 7_1:+70986954 | Msa1035230:CDS |
| GAGAGGTGGTCCTGTTAAGG+AGG | 0.620858 | 7_1:+70987054 | Msa1035230:CDS |
| CGTTCACAACTGGCACTGGT+CGG | 0.625893 | 7_1:+70986625 | Msa1035230:CDS |
| TTGGATGCTGAAAATTGCAA+TGG | 0.632986 | 7_1:+70989107 | Msa1035230:three_prime_UTR |
| GTGAAGCGAAGGATAATGAA+GGG | 0.634620 | 7_1:+70986840 | Msa1035230:CDS |
| GTGAGATTGATTTCATACCC+AGG | 0.635538 | 7_1:-70986803 | None:intergenic |
| TTCCTGGGAAGGTGAAGCGA+AGG | 0.635710 | 7_1:+70986829 | Msa1035230:CDS |
| GGTGAGGCTACGGAGAGTAG+TGG | 0.639392 | 7_1:-70986741 | None:intergenic |
| GTTGATAGTATGGCGAGAGG+TGG | 0.642074 | 7_1:+70987040 | Msa1035230:CDS |
| TTCTGATGAGAATGCTGATG+AGG | 0.643664 | 7_1:+70986907 | Msa1035230:CDS |
| AAGTCCTTCTGTTAAGAAGG+AGG | 0.644149 | 7_1:+70987162 | Msa1035230:CDS |
| TGATGTAGGCTTCGCCGGTG+AGG | 0.647107 | 7_1:-70986757 | None:intergenic |
| ACGGCGAAGGTGATAAACGA+TGG | 0.652154 | 7_1:+70986573 | Msa1035230:CDS |
| GATGTTTCAGAAAGGGAAAG+GGG | 0.652723 | 7_1:+70986991 | Msa1035230:CDS |
| CCTACATCAACATCCGTAAG+GGG | 0.655539 | 7_1:+70986771 | Msa1035230:CDS |
| GACACATACCGATGTACCTG+AGG | 0.657140 | 7_1:+70988824 | Msa1035230:CDS |
| GTATGGGAATGCTACTGTGG+TGG | 0.667144 | 7_1:+70988940 | Msa1035230:CDS |
| GTAAGGGGAAGATTATCCCT+GGG | 0.667636 | 7_1:+70986786 | Msa1035230:CDS |
| ACGATGGCGAAATACGGCGA+AGG | 0.671334 | 7_1:+70986560 | Msa1035230:exon |
| AAGGGAAGTTGATTGTGCAG+AGG | 0.679090 | 7_1:+70987392 | Msa1035230:CDS |
| CAGGTATGGGAATGCTACTG+TGG | 0.679562 | 7_1:+70988937 | Msa1035230:intron |
| TTTGGAGGTTAAGAAGCCGG+CGG | 0.691214 | 7_1:+70987078 | Msa1035230:CDS |
| GTCTGTCACTGGAAGCAATG+TGG | 0.701493 | 7_1:+70987360 | Msa1035230:CDS |
| AGGATTAGTAAGGAGGTTGG+GGG | 0.725145 | 7_1:+70987316 | Msa1035230:CDS |
| GTGGTGGAGAACACTGAAAG+GGG | 0.728002 | 7_1:+70988956 | Msa1035230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGTAAATAAATAATGCT+AGG | + | chr7_1:70987864-70987883 | Msa1035230:intron | 15.0% |
| !!! | TGACATCATATATATTTTTT+AGG | - | chr7_1:70988585-70988604 | None:intergenic | 15.0% |
| !! | AAAAAATATATATGATGTCA+TGG | + | chr7_1:70988585-70988604 | Msa1035230:intron | 15.0% |
| !!! | TAGGTTAGTATTTTAAATAT+TGG | + | chr7_1:70988851-70988870 | Msa1035230:intron | 15.0% |
| !!! | AGGTTAGTATTTTAAATATT+GGG | + | chr7_1:70988852-70988871 | Msa1035230:intron | 15.0% |
| !!! | AATGTTTATTTTATCTTTCT+GGG | + | chr7_1:70988884-70988903 | Msa1035230:intron | 15.0% |
| !!! | TTTTTATAAGGAAAGATTAA+TGG | + | chr7_1:70989077-70989096 | Msa1035230:three_prime_UTR | 15.0% |
| !! | TAATGAGTAAATACTCAAAT+TGG | + | chr7_1:70987928-70987947 | Msa1035230:intron | 20.0% |
| !!! | AATCAAATTTTTCTTTTCCT+TGG | + | chr7_1:70988038-70988057 | Msa1035230:intron | 20.0% |
| !!! | TAAAGTTGATATATCATGAA+TGG | + | chr7_1:70988214-70988233 | Msa1035230:intron | 20.0% |
| !! | AATCTAATTGAATAATGCTA+GGG | + | chr7_1:70988242-70988261 | Msa1035230:intron | 20.0% |
| !! | ATAACAAATAGTATTCACTT+CGG | - | chr7_1:70988468-70988487 | None:intergenic | 20.0% |
| !!! | ATTTTGAAAAAAGTCATCAA+TGG | - | chr7_1:70988620-70988639 | None:intergenic | 20.0% |
| !!! | TTTTAAATATTGGGAATGAT+TGG | + | chr7_1:70988861-70988880 | Msa1035230:intron | 20.0% |
| !!! | GAATGTTTATTTTATCTTTC+TGG | + | chr7_1:70988883-70988902 | Msa1035230:intron | 20.0% |
| !!! | TGCAGATTTTGATTTTTATA+AGG | + | chr7_1:70989065-70989084 | Msa1035230:three_prime_UTR | 20.0% |
| !! | TACATTATCTTTATTACTGT+AGG | + | chr7_1:70989137-70989156 | Msa1035230:three_prime_UTR | 20.0% |
| !!! | GTGAGTTTAGTATTTTTGAT+GGG | + | chr7_1:70987338-70987357 | Msa1035230:CDS | 25.0% |
| ! | GTTATTATACGAGACAAAAT+TGG | - | chr7_1:70987507-70987526 | None:intergenic | 25.0% |
| !! | TGTTAGTTTATAAGTTGAGT+AGG | + | chr7_1:70987704-70987723 | Msa1035230:intron | 25.0% |
| !! | GTTAGTTTATAAGTTGAGTA+GGG | + | chr7_1:70987705-70987724 | Msa1035230:intron | 25.0% |
| ! | TCAGTGTATAAGACTAAATT+GGG | - | chr7_1:70987747-70987766 | None:intergenic | 25.0% |
| ! | AGACTTTAATTGCATTTAGT+TGG | + | chr7_1:70987818-70987837 | Msa1035230:intron | 25.0% |
| ! | TGAGTATTTACTCATTAATC+AGG | - | chr7_1:70987925-70987944 | None:intergenic | 25.0% |
| ! | AATTGGTACTTGAAATTGTA+AGG | + | chr7_1:70987945-70987964 | Msa1035230:intron | 25.0% |
| ! | ATAAAATCTCGATAATCTGA+GGG | - | chr7_1:70987986-70988005 | None:intergenic | 25.0% |
| ! | TATAAAATCTCGATAATCTG+AGG | - | chr7_1:70987987-70988006 | None:intergenic | 25.0% |
| ! | GAATCTAATTGAATAATGCT+AGG | + | chr7_1:70988241-70988260 | Msa1035230:intron | 25.0% |
| ! | TAATTGATACTGTGAAGAAT+CGG | + | chr7_1:70988511-70988530 | Msa1035230:intron | 25.0% |
| ! | TTAAATGTTGTTGTGTTGAA+TGG | + | chr7_1:70988647-70988666 | Msa1035230:intron | 25.0% |
| !!! | AAAGATTAATGGATTCACAT+TGG | + | chr7_1:70989088-70989107 | Msa1035230:three_prime_UTR | 25.0% |
| AATTCGTTGTTGAAGGTTAA+CGG | + | chr7_1:70986863-70986882 | Msa1035230:CDS | 30.0% | |
| GCATTCTCATCAGAAATATA+CGG | - | chr7_1:70986902-70986921 | None:intergenic | 30.0% | |
| GCAGAATAATGTTAATGTTC+CGG | + | chr7_1:70987114-70987133 | Msa1035230:CDS | 30.0% | |
| AAGGAAGAATATTGTGATGA+CGG | + | chr7_1:70987210-70987229 | Msa1035230:CDS | 30.0% | |
| ! | GGATTTGTTTGAGATATTGA+TGG | + | chr7_1:70987255-70987274 | Msa1035230:CDS | 30.0% |
| ! | AGATATTGATGGATGAGAAT+AGG | + | chr7_1:70987266-70987285 | Msa1035230:CDS | 30.0% |
| !! | GGTGAGTTTAGTATTTTTGA+TGG | + | chr7_1:70987337-70987356 | Msa1035230:CDS | 30.0% |
| ATCCTACAATAAAATGTACC+GGG | - | chr7_1:70987581-70987600 | None:intergenic | 30.0% | |
| CATCCTACAATAAAATGTAC+CGG | - | chr7_1:70987582-70987601 | None:intergenic | 30.0% | |
| ATGTTAGAATACCAATGAAC+CGG | - | chr7_1:70987620-70987639 | None:intergenic | 30.0% | |
| ! | ATTATAGACTATGATGACGT+TGG | + | chr7_1:70987638-70987657 | Msa1035230:intron | 30.0% |
| ! | TTATAGACTATGATGACGTT+GGG | + | chr7_1:70987639-70987658 | Msa1035230:intron | 30.0% |
| GTCAGTGTATAAGACTAAAT+TGG | - | chr7_1:70987748-70987767 | None:intergenic | 30.0% | |
| !! | TTCTAGAATGTTCGTTAGAT+TGG | + | chr7_1:70987772-70987791 | Msa1035230:intron | 30.0% |
| CTATTAGAATACAAATGCAG+CGG | - | chr7_1:70987800-70987819 | None:intergenic | 30.0% | |
| GATTGGTACTTGAAATTGTA+TGG | + | chr7_1:70988071-70988090 | Msa1035230:intron | 30.0% | |
| ! | TAGTATCGAATCTCGATAAT+TGG | - | chr7_1:70988116-70988135 | None:intergenic | 30.0% |
| CAATGAGTAAATATCGAAGT+TGG | - | chr7_1:70988382-70988401 | None:intergenic | 30.0% | |
| ATCAATTACAATAGCAACGA+GGG | - | chr7_1:70988499-70988518 | None:intergenic | 30.0% | |
| TATCAATTACAATAGCAACG+AGG | - | chr7_1:70988500-70988519 | None:intergenic | 30.0% | |
| GTTGAATGATGTCGAATTAA+CGG | + | chr7_1:70988723-70988742 | Msa1035230:intron | 30.0% | |
| ATTAACGGAATGATGCATAA+TGG | + | chr7_1:70988738-70988757 | Msa1035230:intron | 30.0% | |
| !!! | GCATAATGGTTTATTTTTGC+AGG | + | chr7_1:70988752-70988771 | Msa1035230:intron | 30.0% |
| !!! | TATGGTTGGTTTTCTTATAC+AGG | + | chr7_1:70988918-70988937 | Msa1035230:intron | 30.0% |
| !! | TTGGTTTTCTTATACAGGTA+TGG | + | chr7_1:70988923-70988942 | Msa1035230:intron | 30.0% |
| ! | TGGTTTTCTTATACAGGTAT+GGG | + | chr7_1:70988924-70988943 | Msa1035230:intron | 30.0% |
| TTAAGAAAGAAGGGTTGGAA+AGG | - | chr7_1:70986474-70986493 | None:intergenic | 35.0% | |
| TTGGTTTAAGAAAGAAGGGT+TGG | - | chr7_1:70986479-70986498 | None:intergenic | 35.0% | |
| ! | GGGTTTGGTTTAAGAAAGAA+GGG | - | chr7_1:70986483-70986502 | None:intergenic | 35.0% |
| ! | AGGGTTTGGTTTAAGAAAGA+AGG | - | chr7_1:70986484-70986503 | None:intergenic | 35.0% |
| ! | TGAGATTGATTTCATACCCA+GGG | - | chr7_1:70986805-70986824 | None:intergenic | 35.0% |
| AAATCAATCTCACTGTTTCC+TGG | + | chr7_1:70986813-70986832 | Msa1035230:CDS | 35.0% | |
| AATCAATCTCACTGTTTCCT+GGG | + | chr7_1:70986814-70986833 | Msa1035230:CDS | 35.0% | |
| TCAACTATAACCCTAACATC+AGG | - | chr7_1:70986935-70986954 | None:intergenic | 35.0% | |
| TTGAAGATGAAAGTCCGATT+GGG | + | chr7_1:70986951-70986970 | Msa1035230:CDS | 35.0% | |
| AAGAAGAAGGAGAGTAAGAA+GGG | + | chr7_1:70987187-70987206 | Msa1035230:CDS | 35.0% | |
| TGACGGAGAAGTTTAATTGT+CGG | + | chr7_1:70987227-70987246 | Msa1035230:CDS | 35.0% | |
| ! | TATTGATGGATGAGAATAGG+TGG | + | chr7_1:70987269-70987288 | Msa1035230:CDS | 35.0% |
| GATGTTAGTTAGATTTGTCC+CGG | + | chr7_1:70987560-70987579 | Msa1035230:intron | 35.0% | |
| GATGTTAGTTAGATTTGTCC+CGG | + | chr7_1:70987560-70987579 | Msa1035230:intron | 35.0% | |
| TGTTAGAATACCAATGAACC+GGG | - | chr7_1:70987619-70987638 | None:intergenic | 35.0% | |
| ! | GTTGAGTAGGGAAATTTTGT+AGG | + | chr7_1:70987717-70987736 | Msa1035230:intron | 35.0% |
| ! | TTGATAACAGATCCAGACAT+AGG | + | chr7_1:70987893-70987912 | Msa1035230:intron | 35.0% |
| TGATAACAGATCCAGACATA+GGG | + | chr7_1:70987894-70987913 | Msa1035230:intron | 35.0% | |
| TGGTACTTGAAATTGTAAGG+CGG | + | chr7_1:70987948-70987967 | Msa1035230:intron | 35.0% | |
| ! | TCTTTTCCTTGGTATTTGCA+AGG | + | chr7_1:70988049-70988068 | Msa1035230:intron | 35.0% |
| TGGTACTTGAAATTGTATGG+TGG | + | chr7_1:70988074-70988093 | Msa1035230:intron | 35.0% | |
| ATCGAATCTCGATAATTGGA+GGG | - | chr7_1:70988112-70988131 | None:intergenic | 35.0% | |
| TATCGAATCTCGATAATTGG+AGG | - | chr7_1:70988113-70988132 | None:intergenic | 35.0% | |
| TTCCTAGAGAATTCAGACAT+AGG | + | chr7_1:70988271-70988290 | Msa1035230:intron | 35.0% | |
| TCCTAGAGAATTCAGACATA+GGG | + | chr7_1:70988272-70988291 | Msa1035230:intron | 35.0% | |
| TGATACACCTTACAATTTCG+AGG | + | chr7_1:70988355-70988374 | Msa1035230:intron | 35.0% | |
| ACTTCGGTCTATGGAATTAT+AGG | - | chr7_1:70988452-70988471 | None:intergenic | 35.0% | |
| ATAGTATTCACTTCGGTCTA+TGG | - | chr7_1:70988461-70988480 | None:intergenic | 35.0% | |
| TCAATTACAATAGCAACGAG+GGG | - | chr7_1:70988498-70988517 | None:intergenic | 35.0% | |
| AATACTAACCTATCTTCCTC+AGG | - | chr7_1:70988843-70988862 | None:intergenic | 35.0% | |
| TTGGATGCTGAAAATTGCAA+TGG | + | chr7_1:70989107-70989126 | Msa1035230:three_prime_UTR | 35.0% | |
| GAAAGGTCTAGAAAGAAGGA+TGG | - | chr7_1:70986457-70986476 | None:intergenic | 40.0% | |
| GTTGGAAAGGTCTAGAAAGA+AGG | - | chr7_1:70986461-70986480 | None:intergenic | 40.0% | |
| !!! | GAGTAGTGGTTTTGATGAAG+AGG | - | chr7_1:70986730-70986749 | None:intergenic | 40.0% |
| ! | GTGAGATTGATTTCATACCC+AGG | - | chr7_1:70986806-70986825 | None:intergenic | 40.0% |
| GTGAAGCGAAGGATAATGAA+GGG | + | chr7_1:70986840-70986859 | Msa1035230:CDS | 40.0% | |
| TGAAGGGAATTCGTTGTTGA+AGG | + | chr7_1:70986856-70986875 | Msa1035230:CDS | 40.0% | |
| TTCTGATGAGAATGCTGATG+AGG | + | chr7_1:70986907-70986926 | Msa1035230:CDS | 40.0% | |
| TGATGAGGATCCTGATGTTA+GGG | + | chr7_1:70986922-70986941 | Msa1035230:CDS | 40.0% | |
| GTTGAAGATGAAAGTCCGAT+TGG | + | chr7_1:70986950-70986969 | Msa1035230:CDS | 40.0% | |
| AAGGATGCGATGTTTCAGAA+AGG | + | chr7_1:70986983-70987002 | Msa1035230:CDS | 40.0% | |
| AGGATGCGATGTTTCAGAAA+GGG | + | chr7_1:70986984-70987003 | Msa1035230:CDS | 40.0% | |
| CGATGTTTCAGAAAGGGAAA+GGG | + | chr7_1:70986990-70987009 | Msa1035230:CDS | 40.0% | |
| GATGTTTCAGAAAGGGAAAG+GGG | + | chr7_1:70986991-70987010 | Msa1035230:CDS | 40.0% | |
| !! | GGTGATTTTGGAGAAGGTTA+GGG | + | chr7_1:70987012-70987031 | Msa1035230:CDS | 40.0% |
| !! | TTTTGGAGAAGGTTAGGGTT+TGG | + | chr7_1:70987017-70987036 | Msa1035230:CDS | 40.0% |
| TTTGGAGAAGGTTAGGGTTT+GGG | + | chr7_1:70987018-70987037 | Msa1035230:CDS | 40.0% | |
| !! | TAGGGTTTGGGTTGATAGTA+TGG | + | chr7_1:70987030-70987049 | Msa1035230:CDS | 40.0% |
| TAATGTTAATGTTCCGGCGA+CGG | + | chr7_1:70987120-70987139 | Msa1035230:CDS | 40.0% | |
| GTCAAGTCCTTCTGTTAAGA+AGG | + | chr7_1:70987159-70987178 | Msa1035230:CDS | 40.0% | |
| AAGTCCTTCTGTTAAGAAGG+AGG | + | chr7_1:70987162-70987181 | Msa1035230:CDS | 40.0% | |
| TTCTCCTCCTTCTTAACAGA+AGG | - | chr7_1:70987169-70987188 | None:intergenic | 40.0% | |
| TAAGAAGGAGGAGAAGAAGA+AGG | + | chr7_1:70987174-70987193 | Msa1035230:CDS | 40.0% | |
| GAAGAAGAAGGAGAGTAAGA+AGG | + | chr7_1:70987186-70987205 | Msa1035230:CDS | 40.0% | |
| GACGGAGAAGTTTAATTGTC+GGG | + | chr7_1:70987228-70987247 | Msa1035230:CDS | 40.0% | |
| ATGGATGAGAATAGGTGGAA+GGG | + | chr7_1:70987274-70987293 | Msa1035230:CDS | 40.0% | |
| ! | GAGTAATGCGAGGATTAGTA+AGG | + | chr7_1:70987306-70987325 | Msa1035230:CDS | 40.0% |
| ! | TAATGCGAGGATTAGTAAGG+AGG | + | chr7_1:70987309-70987328 | Msa1035230:CDS | 40.0% |
| !! | ATTTTTGATGGGTCTGTCAC+TGG | + | chr7_1:70987349-70987368 | Msa1035230:CDS | 40.0% |
| ! | GTCCCGGTACATTTTATTGT+AGG | + | chr7_1:70987576-70987595 | Msa1035230:intron | 40.0% |
| TTAGATTTGTCCCGGTTCAT+TGG | + | chr7_1:70987606-70987625 | Msa1035230:intron | 40.0% | |
| !! | GCATTTAGTTGGTAATGACG+TGG | + | chr7_1:70987829-70987848 | Msa1035230:intron | 40.0% |
| TCCTTGGTATTTGCAAGGAT+TGG | + | chr7_1:70988054-70988073 | Msa1035230:intron | 40.0% | |
| ACCAATCCTTGCAAATACCA+AGG | - | chr7_1:70988058-70988077 | None:intergenic | 40.0% | |
| GATAATTGGAGGGTCTAGAT+TGG | - | chr7_1:70988102-70988121 | None:intergenic | 40.0% | |
| TCCTTGCAAATACTAAGGGA+GGG | - | chr7_1:70988179-70988198 | None:intergenic | 40.0% | |
| GTCCTCCTTGCAAATACTAA+GGG | - | chr7_1:70988183-70988202 | None:intergenic | 40.0% | |
| AGTCCTCCTTGCAAATACTA+AGG | - | chr7_1:70988184-70988203 | None:intergenic | 40.0% | |
| TCCCTATGTCTGAATTCTCT+AGG | - | chr7_1:70988276-70988295 | None:intergenic | 40.0% | |
| TAGTCACCAAGAAACGATCT+CGG | - | chr7_1:70988324-70988343 | None:intergenic | 40.0% | |
| ! | TTCTTGGTGACTAGGTTGAA+TGG | + | chr7_1:70988331-70988350 | Msa1035230:intron | 40.0% |
| AGTTGGTCCTCGAAATTGTA+AGG | - | chr7_1:70988365-70988384 | None:intergenic | 40.0% | |
| CAATTACAATAGCAACGAGG+GGG | - | chr7_1:70988497-70988516 | None:intergenic | 40.0% | |
| AGGTTTACAACAGTAACTCC+TGG | - | chr7_1:70988804-70988823 | None:intergenic | 40.0% | |
| !! | TTCTGGGTGATTTGCTGATA+TGG | + | chr7_1:70988900-70988919 | Msa1035230:intron | 40.0% |
| !! | GGAGGGAACTTATTTTCCAA+AGG | + | chr7_1:70988981-70989000 | Msa1035230:CDS | 40.0% |
| CAAAAACAGCACGTATCCTT+TGG | - | chr7_1:70989000-70989019 | None:intergenic | 40.0% | |
| !!! | CAAAGGATACGTGCTGTTTT+TGG | + | chr7_1:70988998-70989017 | Msa1035230:CDS | 40.0% |
| !!! | ATACGTGCTGTTTTTGGCTT+TGG | + | chr7_1:70989004-70989023 | Msa1035230:CDS | 40.0% |
| !!! | TGTGGATGTGGTTTTGGTGA+GGG | - | chr7_1:70986517-70986536 | None:intergenic | 45.0% |
| !!! | TTGTGGATGTGGTTTTGGTG+AGG | - | chr7_1:70986518-70986537 | None:intergenic | 45.0% |
| ! | TTCGGTTGTGGATGTGGTTT+TGG | - | chr7_1:70986523-70986542 | None:intergenic | 45.0% |
| ! | TACGGTGAGAATTGGTGGTT+CGG | - | chr7_1:70986541-70986560 | None:intergenic | 45.0% |
| ATCGTTGAAGAACGTCCAGA+CGG | + | chr7_1:70986596-70986615 | Msa1035230:CDS | 45.0% | |
| TTGTGAACGTTAGTTCCGTC+TGG | - | chr7_1:70986614-70986633 | None:intergenic | 45.0% | |
| ACGGAACTAACGTTCACAAC+TGG | + | chr7_1:70986615-70986634 | Msa1035230:CDS | 45.0% | |
| CGGAGACAAACTGTCTAGAA+TGG | + | chr7_1:70986645-70986664 | Msa1035230:CDS | 45.0% | |
| TCCAATCTCACCATCCTCAA+CGG | + | chr7_1:70986695-70986714 | Msa1035230:CDS | 45.0% | |
| AGCCTACATCAACATCCGTA+AGG | + | chr7_1:70986769-70986788 | Msa1035230:CDS | 45.0% | |
| GCCTACATCAACATCCGTAA+GGG | + | chr7_1:70986770-70986789 | Msa1035230:CDS | 45.0% | |
| CCTACATCAACATCCGTAAG+GGG | + | chr7_1:70986771-70986790 | Msa1035230:CDS | 45.0% | |
| CAGGGATAATCTTCCCCTTA+CGG | - | chr7_1:70986787-70986806 | None:intergenic | 45.0% | |
| GTAAGGGGAAGATTATCCCT+GGG | + | chr7_1:70986786-70986805 | Msa1035230:CDS | 45.0% | |
| AATCTCACTGTTTCCTGGGA+AGG | + | chr7_1:70986818-70986837 | Msa1035230:CDS | 45.0% | |
| GGTGAAGCGAAGGATAATGA+AGG | + | chr7_1:70986839-70986858 | Msa1035230:CDS | 45.0% | |
| CTGATGAGGATCCTGATGTT+AGG | + | chr7_1:70986921-70986940 | Msa1035230:CDS | 45.0% | |
| AAGATGAAAGTCCGATTGGG+AGG | + | chr7_1:70986954-70986973 | Msa1035230:CDS | 45.0% | |
| TCCTTAATCCTCCTCCCAAT+CGG | - | chr7_1:70986968-70986987 | None:intergenic | 45.0% | |
| GCGATGTTTCAGAAAGGGAA+AGG | + | chr7_1:70986989-70987008 | Msa1035230:CDS | 45.0% | |
| ! | GAAAGGGAAAGGGGTGATTT+TGG | + | chr7_1:70987000-70987019 | Msa1035230:CDS | 45.0% |
| !! | GAAAGGGGTGATTTTGGAGA+AGG | + | chr7_1:70987006-70987025 | Msa1035230:CDS | 45.0% |
| !! | GGGTGATTTTGGAGAAGGTT+AGG | + | chr7_1:70987011-70987030 | Msa1035230:CDS | 45.0% |
| TGGTCCTGTTAAGGAGGATT+TGG | + | chr7_1:70987060-70987079 | Msa1035230:CDS | 45.0% | |
| TCCTGTTAAGGAGGATTTGG+AGG | + | chr7_1:70987063-70987082 | Msa1035230:CDS | 45.0% | |
| ACCTCCAAATCCTCCTTAAC+AGG | - | chr7_1:70987067-70987086 | None:intergenic | 45.0% | |
| GGATTTGGAGGTTAAGAAGC+CGG | + | chr7_1:70987075-70987094 | Msa1035230:CDS | 45.0% | |
| AGAAGGAGAGTAAGAAGGGA+AGG | + | chr7_1:70987191-70987210 | Msa1035230:CDS | 45.0% | |
| GAAGTTTAATTGTCGGGCGA+AGG | + | chr7_1:70987234-70987253 | Msa1035230:CDS | 45.0% | |
| GATGGATGAGAATAGGTGGA+AGG | + | chr7_1:70987273-70987292 | Msa1035230:CDS | 45.0% | |
| ! | GTTTTACGCAGAGTAATGCG+AGG | + | chr7_1:70987296-70987315 | Msa1035230:CDS | 45.0% |
| ! | CGAGGATTAGTAAGGAGGTT+GGG | + | chr7_1:70987314-70987333 | Msa1035230:CDS | 45.0% |
| ! | GAGGATTAGTAAGGAGGTTG+GGG | + | chr7_1:70987315-70987334 | Msa1035230:CDS | 45.0% |
| ! | AGGATTAGTAAGGAGGTTGG+GGG | + | chr7_1:70987316-70987335 | Msa1035230:CDS | 45.0% |
| AGCAATGTGGAGTTGCAAGA+AGG | + | chr7_1:70987373-70987392 | Msa1035230:CDS | 45.0% | |
| GCAATGTGGAGTTGCAAGAA+GGG | + | chr7_1:70987374-70987393 | Msa1035230:CDS | 45.0% | |
| ! | AAGGGAAGTTGATTGTGCAG+AGG | + | chr7_1:70987392-70987411 | Msa1035230:CDS | 45.0% |
| ATTGTGCAGAGGTGGAGATT+CGG | + | chr7_1:70987403-70987422 | Msa1035230:CDS | 45.0% | |
| !! | GATTGATGGTGCTCAATCTC+AGG | + | chr7_1:70987432-70987451 | Msa1035230:CDS | 45.0% |
| ! | AGACTATGATGACGTTGGGT+TGG | + | chr7_1:70987643-70987662 | Msa1035230:intron | 45.0% |
| !! | GATGACGTTGGGTTGGTATT+CGG | + | chr7_1:70987650-70987669 | Msa1035230:intron | 45.0% |
| !! | TGGGTTGGTATTCGGTAATG+TGG | + | chr7_1:70987658-70987677 | Msa1035230:intron | 45.0% |
| ATCAGGTTCATCCCTATGTC+TGG | - | chr7_1:70987908-70987927 | None:intergenic | 45.0% | |
| TCCCTCCCTTAGTATTTGCA+AGG | + | chr7_1:70988175-70988194 | Msa1035230:intron | 45.0% | |
| CTCCTTGCAAATACTAAGGG+AGG | - | chr7_1:70988180-70988199 | None:intergenic | 45.0% | |
| CTCCCTTAGTATTTGCAAGG+AGG | + | chr7_1:70988178-70988197 | Msa1035230:intron | 45.0% | |
| ACCATTCCGAGATCGTTTCT+TGG | + | chr7_1:70988315-70988334 | Msa1035230:intron | 45.0% | |
| ACCAAGAAACGATCTCGGAA+TGG | - | chr7_1:70988319-70988338 | None:intergenic | 45.0% | |
| ! | GAGATCGTTTCTTGGTGACT+AGG | + | chr7_1:70988323-70988342 | Msa1035230:intron | 45.0% |
| ACAACAGTAACTCCTGGTTC+AGG | - | chr7_1:70988798-70988817 | None:intergenic | 45.0% | |
| CCTATCTTCCTCAGGTACAT+CGG | - | chr7_1:70988835-70988854 | None:intergenic | 45.0% | |
| !! | GGGTGATTTGCTGATATGGT+TGG | + | chr7_1:70988904-70988923 | Msa1035230:intron | 45.0% |
| ! | TGTGGTGGAGAACACTGAAA+GGG | + | chr7_1:70988955-70988974 | Msa1035230:CDS | 45.0% |
| !!! | TTAATTTTTTACAATTTTAA+AGG | + | chr7_1:70988403-70988422 | Msa1035230:intron | 5.0% |
| !! | GGTTTTGGTGAGGGAGTGAA+GGG | - | chr7_1:70986508-70986527 | None:intergenic | 50.0% |
| !!! | TGGTTTTGGTGAGGGAGTGA+AGG | - | chr7_1:70986509-70986528 | None:intergenic | 50.0% |
| !! | GAGAATTGGTGGTTCGGTTG+TGG | - | chr7_1:70986535-70986554 | None:intergenic | 50.0% |
| CATCGTACGGTGAGAATTGG+TGG | - | chr7_1:70986546-70986565 | None:intergenic | 50.0% | |
| CACCAATTCTCACCGTACGA+TGG | + | chr7_1:70986544-70986563 | Msa1035230:exon | 50.0% | |
| CACCGTACGATGGCGAAATA+CGG | + | chr7_1:70986554-70986573 | Msa1035230:exon | 50.0% | |
| ACGGCGAAGGTGATAAACGA+TGG | + | chr7_1:70986573-70986592 | Msa1035230:CDS | 50.0% | |
| CTAACGTTCACAACTGGCAC+TGG | + | chr7_1:70986621-70986640 | Msa1035230:CDS | 50.0% | |
| !! | GGAGAGAAGGTTGGTGAAGA+AGG | - | chr7_1:70986678-70986697 | None:intergenic | 50.0% |
| GGTGAGATTGGAGAGAAGGT+TGG | - | chr7_1:70986687-70986706 | None:intergenic | 50.0% | |
| GGATGGTGAGATTGGAGAGA+AGG | - | chr7_1:70986691-70986710 | None:intergenic | 50.0% | |
| GATGTTGATGTAGGCTTCGC+CGG | - | chr7_1:70986765-70986784 | None:intergenic | 50.0% | |
| CCCCTTACGGATGTTGATGT+AGG | - | chr7_1:70986774-70986793 | None:intergenic | 50.0% | |
| CGTAAGGGGAAGATTATCCC+TGG | + | chr7_1:70986785-70986804 | Msa1035230:CDS | 50.0% | |
| ATGAAAGTCCGATTGGGAGG+AGG | + | chr7_1:70986957-70986976 | Msa1035230:CDS | 50.0% | |
| TCCGATTGGGAGGAGGATTA+AGG | + | chr7_1:70986964-70986983 | Msa1035230:CDS | 50.0% | |
| !! | TGGGTTGATAGTATGGCGAG+AGG | + | chr7_1:70987037-70987056 | Msa1035230:CDS | 50.0% |
| !! | GTTGATAGTATGGCGAGAGG+TGG | + | chr7_1:70987040-70987059 | Msa1035230:CDS | 50.0% |
| TTTGGAGGTTAAGAAGCCGG+CGG | + | chr7_1:70987078-70987097 | Msa1035230:CDS | 50.0% | |
| ! | GCGAGGATTAGTAAGGAGGT+TGG | + | chr7_1:70987313-70987332 | Msa1035230:CDS | 50.0% |
| GTCTGTCACTGGAAGCAATG+TGG | + | chr7_1:70987360-70987379 | Msa1035230:CDS | 50.0% | |
| ! | GGAAGTTGATTGTGCAGAGG+TGG | + | chr7_1:70987395-70987414 | Msa1035230:CDS | 50.0% |
| TTGTGCAGAGGTGGAGATTC+GGG | + | chr7_1:70987404-70987423 | Msa1035230:CDS | 50.0% | |
| AGATTCGGGAGCTGGATTGA+TGG | + | chr7_1:70987418-70987437 | Msa1035230:CDS | 50.0% | |
| GGTGCTCAATCTCAGGTATG+TGG | + | chr7_1:70987439-70987458 | Msa1035230:intron | 50.0% | |
| GGCTGATGTCGCATTAATCG+TGG | + | chr7_1:70988532-70988551 | Msa1035230:intron | 50.0% | |
| !! | GCAGGTGAGACTTGTTTTCG+AGG | + | chr7_1:70988770-70988789 | Msa1035230:intron | 50.0% |
| CAGGTACATCGGTATGTGTC+AGG | - | chr7_1:70988824-70988843 | None:intergenic | 50.0% | |
| GACACATACCGATGTACCTG+AGG | + | chr7_1:70988824-70988843 | Msa1035230:CDS | 50.0% | |
| CCGATGTACCTGAGGAAGAT+AGG | + | chr7_1:70988832-70988851 | Msa1035230:CDS | 50.0% | |
| CAGGTATGGGAATGCTACTG+TGG | + | chr7_1:70988937-70988956 | Msa1035230:intron | 50.0% | |
| GTATGGGAATGCTACTGTGG+TGG | + | chr7_1:70988940-70988959 | Msa1035230:CDS | 50.0% | |
| ! | CTGTGGTGGAGAACACTGAA+AGG | + | chr7_1:70988954-70988973 | Msa1035230:CDS | 50.0% |
| ! | GTGGTGGAGAACACTGAAAG+GGG | + | chr7_1:70988956-70988975 | Msa1035230:CDS | 50.0% |
| TGGAGAACACTGAAAGGGGA+TGG | + | chr7_1:70988960-70988979 | Msa1035230:CDS | 50.0% | |
| AGAACACTGAAAGGGGATGG+AGG | + | chr7_1:70988963-70988982 | Msa1035230:CDS | 50.0% | |
| GAACACTGAAAGGGGATGGA+GGG | + | chr7_1:70988964-70988983 | Msa1035230:CDS | 50.0% | |
| AGGGAGTGAAGGGAAGGGTT+TGG | - | chr7_1:70986498-70986517 | None:intergenic | 55.0% | |
| TGGTGAGGGAGTGAAGGGAA+GGG | - | chr7_1:70986503-70986522 | None:intergenic | 55.0% | |
| TTGGTGAGGGAGTGAAGGGA+AGG | - | chr7_1:70986504-70986523 | None:intergenic | 55.0% | |
| !! | TGGTGGTTCGGTTGTGGATG+TGG | - | chr7_1:70986529-70986548 | None:intergenic | 55.0% |
| CGCCATCGTACGGTGAGAAT+TGG | - | chr7_1:70986549-70986568 | None:intergenic | 55.0% | |
| CGCCGTATTTCGCCATCGTA+CGG | - | chr7_1:70986559-70986578 | None:intergenic | 55.0% | |
| ACGATGGCGAAATACGGCGA+AGG | + | chr7_1:70986560-70986579 | Msa1035230:exon | 55.0% | |
| !! | CGTTCACAACTGGCACTGGT+CGG | + | chr7_1:70986625-70986644 | Msa1035230:CDS | 55.0% |
| GCCGTTGAGGATGGTGAGAT+TGG | - | chr7_1:70986699-70986718 | None:intergenic | 55.0% | |
| GTTACCTTCGCCGTTGAGGA+TGG | - | chr7_1:70986708-70986727 | None:intergenic | 55.0% | |
| AGAGGTTACCTTCGCCGTTG+AGG | - | chr7_1:70986712-70986731 | None:intergenic | 55.0% | |
| ACTACTCTCCGTAGCCTCAC+CGG | + | chr7_1:70986743-70986762 | Msa1035230:CDS | 55.0% | |
| TTCCTGGGAAGGTGAAGCGA+AGG | + | chr7_1:70986829-70986848 | Msa1035230:CDS | 55.0% | |
| ATCCTTCGCTTCACCTTCCC+AGG | - | chr7_1:70986834-70986853 | None:intergenic | 55.0% | |
| GAGAGGTGGTCCTGTTAAGG+AGG | + | chr7_1:70987054-70987073 | Msa1035230:CDS | 55.0% | |
| !! | GTTTTCGAGGAGCCTGAACC+AGG | + | chr7_1:70988783-70988802 | Msa1035230:CDS | 55.0% |
| CTCACCATCCTCAACGGCGA+AGG | + | chr7_1:70986701-70986720 | Msa1035230:CDS | 60.0% | |
| GGTGAGGCTACGGAGAGTAG+TGG | - | chr7_1:70986744-70986763 | None:intergenic | 60.0% | |
| TGATGTAGGCTTCGCCGGTG+AGG | - | chr7_1:70986760-70986779 | None:intergenic | 60.0% | |
| GGCGAGAGGTGGTCCTGTTA+AGG | + | chr7_1:70987051-70987070 | Msa1035230:CDS | 60.0% | |
| GCTGTTGTTGTCACCGTCGC+CGG | - | chr7_1:70987136-70987155 | None:intergenic | 60.0% | |
| AGAGGTGGAGATTCGGGAGC+TGG | + | chr7_1:70987410-70987429 | Msa1035230:CDS | 60.0% | |
| AGGCTTCGCCGGTGAGGCTA+CGG | - | chr7_1:70986754-70986773 | None:intergenic | 65.0% | |
| GGTTAAGAAGCCGGCGGCTC+AGG | + | chr7_1:70987084-70987103 | Msa1035230:CDS | 65.0% | |
| TGCTTCACTGCCTGAGCCGC+CGG | - | chr7_1:70987097-70987116 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 70986445 | 70989254 | 70986445 | ID=Msa1035230;Name=Msa1035230 |
| chr7_1 | mRNA | 70986445 | 70989254 | 70986445 | ID=Msa1035230-mRNA-1;Parent=Msa1035230;Name=Msa1035230-mRNA-1;_AED=0.01;_eAED=0.01;_QI=118|1|1|1|1|1|3|221|354 |
| chr7_1 | exon | 70986445 | 70987453 | 70986445 | ID=Msa1035230-mRNA-1:exon:17051;Parent=Msa1035230-mRNA-1 |
| chr7_1 | exon | 70988774 | 70988853 | 70988774 | ID=Msa1035230-mRNA-1:exon:17052;Parent=Msa1035230-mRNA-1 |
| chr7_1 | exon | 70988940 | 70989254 | 70988940 | ID=Msa1035230-mRNA-1:exon:17053;Parent=Msa1035230-mRNA-1 |
| chr7_1 | five_prime_UTR | 70986445 | 70986562 | 70986445 | ID=Msa1035230-mRNA-1:five_prime_utr;Parent=Msa1035230-mRNA-1 |
| chr7_1 | CDS | 70986563 | 70987453 | 70986563 | ID=Msa1035230-mRNA-1:cds;Parent=Msa1035230-mRNA-1 |
| chr7_1 | CDS | 70988774 | 70988853 | 70988774 | ID=Msa1035230-mRNA-1:cds;Parent=Msa1035230-mRNA-1 |
| chr7_1 | CDS | 70988940 | 70989033 | 70988940 | ID=Msa1035230-mRNA-1:cds;Parent=Msa1035230-mRNA-1 |
| chr7_1 | three_prime_UTR | 70989034 | 70989254 | 70989034 | ID=Msa1035230-mRNA-1:three_prime_utr;Parent=Msa1035230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
