AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1118450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1118450 MtrunA17_Chr7g0253981 95.977 522 17 2 12 533 1 518 0.0 1018
Msa1118450 MtrunA17_Chr5g0401031 35.185 486 291 9 30 511 13 478 2.00e-75 246
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1118450 AT1G28760.1 50.881 454 186 11 86 529 49 475 5.18e-149 436
Msa1118450 AT5G67610.1 34.898 490 276 12 31 509 16 473 7.98e-78 253
Msa1118450 AT5G67610.2 35.575 461 260 10 60 509 51 485 6.24e-77 251
Msa1118450 AT3G49840.2 32.179 491 270 16 30 509 17 455 2.54e-63 214
Msa1118450 AT3G49840.1 31.976 491 270 15 30 509 17 454 3.77e-63 214

Find 125 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACTTCTGGGACTCAATT+AGG 0.139513 7_3:-67109556 Msa1118450:CDS
TGTATCTCCTTCCTTACTTT+TGG 0.163842 7_3:-67113139 Msa1118450:CDS
TGTGAGCGCGTTCAAGTTTC+TGG 0.164433 7_3:-67113078 Msa1118450:CDS
CAGGAAGTGGAAATGGATTT+TGG 0.174652 7_3:-67109312 Msa1118450:CDS
GGTGTTGTATCACCATCTTC+TGG 0.180077 7_3:-67109589 Msa1118450:CDS
TTCCTGTACATTACCATATA+TGG 0.198198 7_3:-67112308 Msa1118450:CDS
TGTGAACTTCTTTCTGTTGC+CGG 0.253295 7_3:+67109504 None:intergenic
GAGATTGCATAACAAAATTA+AGG 0.256111 7_3:-67112980 Msa1118450:CDS
CTGGAGCTGCTTTAGGCTAC+TGG 0.290809 7_3:-67111498 Msa1118450:CDS
AAACTTCTGGGACTCAATTA+GGG 0.296814 7_3:-67109555 Msa1118450:CDS
ATTGAACTGCTATAATAAAA+TGG 0.300837 7_3:+67112497 None:intergenic
GGTTGCTCTTTCTGTACTAC+TGG 0.305584 7_3:-67111533 Msa1118450:CDS
CAATGTGGAACAACCCTAAA+AGG 0.312072 7_3:-67110300 Msa1118450:CDS
AAATGGGCAATGCGCGTTAT+TGG 0.321806 7_3:-67111409 Msa1118450:CDS
ACGATCCAGTCAGTGAATTC+TGG 0.325513 7_3:+67109415 None:intergenic
GATTGTTCAGGCTTACAGTT+TGG 0.335474 7_3:+67109118 None:intergenic
TTGTTACCTTTGAGGGTGAT+AGG 0.342713 7_3:+67113762 None:intergenic
GAACAATCATGTCAAATCTA+TGG 0.349932 7_3:-67109103 Msa1118450:three_prime_UTR
AACAGTAACGAATGTAATTT+AGG 0.354262 7_3:-67109212 Msa1118450:three_prime_UTR
TGTACTACTGGGTATCATCT+TGG 0.358173 7_3:-67111521 Msa1118450:CDS
TAGATTTGACATGATTGTTC+AGG 0.364828 7_3:+67109106 None:intergenic
GTGTTGTATCACCATCTTCT+GGG 0.371482 7_3:-67109588 Msa1118450:CDS
ACTCACCACTGATCCATATA+TGG 0.376935 7_3:+67112295 None:intergenic
GGGGTGTACAGAAAGGGATT+TGG 0.386641 7_3:-67112801 Msa1118450:CDS
ATTCAATTCTTCAGAGTCTT+GGG 0.388913 7_3:-67112133 Msa1118450:CDS
TACTCTTGCAGTTGGAGCCT+TGG 0.388943 7_3:-67110973 Msa1118450:CDS
TATAGCAGTTCAATGGCTAT+AGG 0.395624 7_3:-67112488 Msa1118450:CDS
TAATTCATTGCATGTTACTT+TGG 0.398470 7_3:-67113025 Msa1118450:CDS
AATTTACGATCATAGAGAAT+TGG 0.399637 7_3:+67112153 None:intergenic
GGCTCCAATTGTTAGCAGTT+GGG 0.402028 7_3:-67112522 Msa1118450:CDS
AATTCAATTCTTCAGAGTCT+TGG 0.407150 7_3:-67112134 Msa1118450:CDS
GGGTTGCTCAGTTTGTGAAA+TGG 0.409305 7_3:-67111426 Msa1118450:CDS
CAAAGCAAGCTTTAGCTGAA+TGG 0.415906 7_3:-67109447 Msa1118450:CDS
GAGGAGAGTTGTTACCTTTG+AGG 0.420427 7_3:+67113754 None:intergenic
ACAGAGGCAGGAAGTGGAAA+TGG 0.422390 7_3:-67109319 Msa1118450:CDS
TGGCTCCAATTGTTAGCAGT+TGG 0.424714 7_3:-67112523 Msa1118450:CDS
GGTTGCTCAGTTTGTGAAAT+GGG 0.425437 7_3:-67111425 Msa1118450:CDS
ACTGCTTCCGAGCGAGAGTT+CGG 0.428570 7_3:-67109371 Msa1118450:CDS
TGGATTGATATTGCTGCTGT+TGG 0.429242 7_3:-67112543 Msa1118450:CDS
AGGAGAGTTGTTACCTTTGA+GGG 0.429598 7_3:+67113755 None:intergenic
GGTGAGAGGAACCCGTGGTC+GGG 0.430495 7_3:-67110392 Msa1118450:CDS
CAATACAATTGCTTCATGAA+TGG 0.432133 7_3:-67110917 Msa1118450:intron
ATGATGATTATTCACTAGAA+TGG 0.434162 7_3:-67110414 Msa1118450:CDS
AGGAGAAGATTGATCATTGT+TGG 0.439643 7_3:+67113782 None:intergenic
ATCTTGGCTGGAGCTGCTTT+AGG 0.440307 7_3:-67111505 Msa1118450:CDS
GGAACCCAACTGCTAACAAT+TGG 0.440479 7_3:+67112518 None:intergenic
AGAAGTTCACAAAGGAAGAA+TGG 0.440891 7_3:-67109492 Msa1118450:CDS
TTCAGCTAAAGCTTGCTTTG+TGG 0.441989 7_3:+67109450 None:intergenic
CTTTAGGCTACTGGATTGTC+AGG 0.442622 7_3:-67111489 Msa1118450:CDS
CAAGATCGATTGTGAAATAC+CGG 0.445444 7_3:-67112737 Msa1118450:CDS
CGCCTCATTAGTCTTGCAGT+TGG 0.453752 7_3:-67112563 Msa1118450:CDS
GAAGTTCACAAAGGAAGAAT+GGG 0.457343 7_3:-67109491 Msa1118450:CDS
CTTTAGGAGGTGACTTGCTA+AGG 0.458852 7_3:+67110362 None:intergenic
AATTGAGTCCCAGAAGTTTG+TGG 0.462194 7_3:+67109559 None:intergenic
GTTACAGTTGCACTTAAAGA+AGG 0.464576 7_3:-67112709 Msa1118450:intron
TGATATTGAAAGTCCAACTT+TGG 0.466308 7_3:-67113163 Msa1118450:CDS
TCTTTCTGTTGCCGGTCTTG+TGG 0.469024 7_3:+67109512 None:intergenic
TCATAGAGAATTGGTGCAAA+AGG 0.472297 7_3:+67112162 None:intergenic
ATCAGACTGCCCCAAAAGTA+AGG 0.473066 7_3:+67113128 None:intergenic
AAAGCAAGCTTTAGCTGAAT+GGG 0.473252 7_3:-67109446 Msa1118450:CDS
CTTGATAATACTCTTGCAGT+TGG 0.479961 7_3:-67110981 Msa1118450:CDS
TTTGTTATTTCAAAAGAAGA+TGG 0.483979 7_3:-67111463 Msa1118450:CDS
TGATGATTATTCACTAGAAT+GGG 0.484137 7_3:-67110413 Msa1118450:CDS
GATATTGAAAGTCCAACTTT+GGG 0.484800 7_3:-67113162 Msa1118450:CDS
GAATCGGATTCCACAGAGGC+AGG 0.485362 7_3:-67109331 Msa1118450:CDS
GGTATGAAATTATTGCCAAC+TGG 0.490927 7_3:-67112341 Msa1118450:CDS
GACTGGAGGGGTGTACAGAA+AGG 0.493026 7_3:-67112808 Msa1118450:CDS
AAGCGCCATCAGCAAATTCA+AGG 0.494398 7_3:-67113871 Msa1118450:CDS
ATCCATATATGGTAATGTAC+AGG 0.507199 7_3:+67112306 None:intergenic
TATTCAACATTCCACAAGAC+CGG 0.507281 7_3:-67109523 Msa1118450:CDS
CTACTGGGTATCATCTTGGC+TGG 0.511645 7_3:-67111517 Msa1118450:CDS
CTTAGCAAGTCACCTCCTAA+AGG 0.513329 7_3:-67110361 Msa1118450:CDS
CTCTCAGGAATTGCAACAGA+TGG 0.513447 7_3:+67113000 None:intergenic
TCAACATATCTAGTTTCATA+AGG 0.515189 7_3:+67112763 None:intergenic
GATTCCACAGAGGCAGGAAG+TGG 0.517050 7_3:-67109325 Msa1118450:CDS
ATTTCCACTTCCTGCCTCTG+TGG 0.523838 7_3:+67109321 None:intergenic
AAGGAATTCCGCCCGACCAC+GGG 0.524500 7_3:+67110381 None:intergenic
AAGATGGCAGTGTAGATGCC+GGG 0.526101 7_3:-67111447 Msa1118450:CDS
ATGTGCAGGAATAATACTCT+TGG 0.528936 7_3:-67112853 Msa1118450:intron
GTCTCGTCCGAACTCTCGCT+CGG 0.529462 7_3:+67109364 None:intergenic
GAGAGGAACCCGTGGTCGGG+CGG 0.540107 7_3:-67110389 Msa1118450:CDS
GCTTACAGTTTGGAAAATCC+AGG 0.540329 7_3:+67109128 None:intergenic
CGAGACAATGGAGAGTGAAT+CGG 0.541615 7_3:-67109347 Msa1118450:CDS
GAGTGAAGAGATGCACAATC+CGG 0.541797 7_3:-67112108 Msa1118450:intron
GTCAGTGTGAAAAGGATGAC+TGG 0.542317 7_3:-67112825 Msa1118450:CDS
GAAGATGGCAGTGTAGATGC+CGG 0.547920 7_3:-67111448 Msa1118450:CDS
CGAGAGTTCGGACGAGACAA+TGG 0.548252 7_3:-67109359 Msa1118450:CDS
GAAGGAGATACACCCAAAGT+TGG 0.548963 7_3:+67113150 None:intergenic
GCAACCCTTGAATTTGCTGA+TGG 0.558035 7_3:+67113866 None:intergenic
TGTGGCGAAAACCCAGAAGA+TGG 0.564971 7_3:+67109577 None:intergenic
GTTGCTCTTTCTGTACTACT+GGG 0.565412 7_3:-67111532 Msa1118450:CDS
CATCTCCAGAATTCACTGAC+TGG 0.568556 7_3:-67109420 Msa1118450:CDS
GACTGCCCCAAAAGTAAGGA+AGG 0.573761 7_3:+67113132 None:intergenic
ACTGGAGGGGTGTACAGAAA+GGG 0.573841 7_3:-67112807 Msa1118450:CDS
TGGTCTGACTCTCCTGTGAG+AGG 0.576376 7_3:-67110271 Msa1118450:intron
GGGTGAGAGGAACCCGTGGT+CGG 0.579700 7_3:-67110393 Msa1118450:CDS
ATGTGGAATAGCCCTAAAAG+TGG 0.582042 7_3:-67110334 Msa1118450:CDS
TCTTCTCCTATCACCCTCAA+AGG 0.590992 7_3:-67113768 Msa1118450:intron
TGGATGGTGTCAGTGTGAAA+AGG 0.597753 7_3:-67112833 Msa1118450:CDS
TTGGGGCAGTCTGATACTCA+AGG 0.597921 7_3:-67113120 Msa1118450:CDS
TTTCACAAACTGAGCAACCC+CGG 0.604583 7_3:+67111429 None:intergenic
ATCCAACTGCAAGACTAATG+AGG 0.607041 7_3:+67112561 None:intergenic
CATTACCATATATGGATCAG+TGG 0.608996 7_3:-67112300 Msa1118450:intron
GGTATCTCAAGATTGAAGCT+CGG 0.614150 7_3:-67113057 Msa1118450:CDS
TGGAAAGACATACCTCTCAC+AGG 0.621342 7_3:+67110259 None:intergenic
GGATCGTTGACCATGCAGAT+CGG 0.623735 7_3:-67109399 Msa1118450:CDS
GTTGGCGAGTGAAGAAGTGA+AGG 0.631703 7_3:+67113800 None:intergenic
GTGTGAAAAGGATGACTGGA+GGG 0.637824 7_3:-67112821 Msa1118450:CDS
AGCGCCATCAGCAAATTCAA+GGG 0.640054 7_3:-67113870 Msa1118450:CDS
TAACAACTAGAGTGATGAGG+TGG 0.642956 7_3:-67113926 Msa1118450:exon
ACAACCCTAAAAGGACGTCA+TGG 0.645076 7_3:-67110291 Msa1118450:CDS
AACTTCTGGGACTCAATTAG+GGG 0.646073 7_3:-67109554 Msa1118450:CDS
TATTCACTAGAATGGGTGAG+AGG 0.650160 7_3:-67110406 Msa1118450:CDS
AGATGGCAGTGTAGATGCCG+GGG 0.652953 7_3:-67111446 Msa1118450:CDS
AGTGCAACTGTAACTGAACC+CGG 0.653087 7_3:+67112718 None:intergenic
AACAGCTCCACAAAAGACCA+AGG 0.662563 7_3:+67110956 None:intergenic
AAGTAACAACTAGAGTGATG+AGG 0.669323 7_3:-67113929 Msa1118450:exon
GCAGGAATAATACTCTTGGA+TGG 0.680449 7_3:-67112849 Msa1118450:intron
AAGATCGATTGTGAAATACC+GGG 0.694905 7_3:-67112736 Msa1118450:CDS
CAACAGAAAGAAGTTCACAA+AGG 0.699080 7_3:-67109500 Msa1118450:CDS
GTGGCTCTAAAGCAACAATG+TGG 0.703894 7_3:-67110315 Msa1118450:CDS
AGTGTGAAAAGGATGACTGG+AGG 0.709404 7_3:-67112822 Msa1118450:CDS
TGTGAAAAGGATGACTGGAG+GGG 0.715947 7_3:-67112820 Msa1118450:CDS
GAATGGGTGAGAGGAACCCG+TGG 0.719365 7_3:-67110397 Msa1118450:CDS
GAGTGAATCGGATTCCACAG+AGG 0.750499 7_3:-67109335 Msa1118450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAAATCAATTTTAAAAAAAA+TGG + chr7_3:67109425-67109444 None:intergenic 10.0%
!! ATATATGTATATCTTATATA+CGG - chr7_3:67111129-67111148 Msa1118450:intron 10.0%
!! TAAATTATTATATACTGAAA+GGG + chr7_3:67111329-67111348 None:intergenic 10.0%
!! TTAAATTATTATATACTGAA+AGG + chr7_3:67111330-67111349 None:intergenic 10.0%
!! AAAAAAAATCAGAATAAATA+GGG + chr7_3:67112024-67112043 None:intergenic 10.0%
!! AAAAAAAAATCAGAATAAAT+AGG + chr7_3:67112025-67112044 None:intergenic 10.0%
!!! TTTTCATTTTTACATAATAT+AGG - chr7_3:67112397-67112416 Msa1118450:intron 10.0%
!! AAAAATATAAAAAATGATTC+TGG + chr7_3:67112928-67112947 None:intergenic 10.0%
!!! TAAGATTTTTTAAAATTTCT+TGG - chr7_3:67113206-67113225 Msa1118450:intron 10.0%
!!! ATAAATTGTTGCATTTTTTA+TGG - chr7_3:67110989-67111008 Msa1118450:CDS 15.0%
!! AAATTATTATATACTGAAAG+GGG + chr7_3:67111328-67111347 None:intergenic 15.0%
!!! AATCCATTTCTTTATTTATT+TGG - chr7_3:67111981-67112000 Msa1118450:intron 15.0%
!! AAAAAAATCAGAATAAATAG+GGG + chr7_3:67112023-67112042 None:intergenic 15.0%
!! AAATAATGATAAAATAACAC+AGG + chr7_3:67112493-67112512 None:intergenic 15.0%
!!! TAAAATTTTGTTGATTGTAA+TGG - chr7_3:67113138-67113157 Msa1118450:CDS 15.0%
!! AACAAAAAAATCAAATTCGA+TGG - chr7_3:67109148-67109167 Msa1118450:three_prime_UTR 20.0%
!! ACAAAAAAATCAAATTCGAT+GGG - chr7_3:67109149-67109168 Msa1118450:three_prime_UTR 20.0%
!! TTTCTTTATGTGATTCTATT+GGG - chr7_3:67109554-67109573 Msa1118450:CDS 20.0%
!! GTAAAACATAATAAGACAAA+AGG + chr7_3:67109770-67109789 None:intergenic 20.0%
!!! AAATTAAGGTTTGTTTTCAT+AGG - chr7_3:67110080-67110099 Msa1118450:intron 20.0%
!! ATTGAACTGCTATAATAAAA+TGG + chr7_3:67110552-67110571 None:intergenic 20.0%
!!! ATTTTATTATAGCAGTTCAA+TGG - chr7_3:67110551-67110570 Msa1118450:intron 20.0%
!!! CATTATAATCATTCTTTTTC+AGG - chr7_3:67110593-67110612 Msa1118450:intron 20.0%
!! AATTACCTTTGTATTATACA+TGG - chr7_3:67110621-67110640 Msa1118450:intron 20.0%
!! CATAACACAAAAGTAATATT+AGG + chr7_3:67110841-67110860 None:intergenic 20.0%
!! TATCTAACAAAAAAATAGAC+AGG + chr7_3:67110972-67110991 None:intergenic 20.0%
!!! ATATAATAAGGTTTTCTCTT+TGG - chr7_3:67111243-67111262 Msa1118450:intron 20.0%
!!! TATAATAAGGTTTTCTCTTT+GGG - chr7_3:67111244-67111263 Msa1118450:intron 20.0%
!! TATTTCATAAGAAGAATTGA+CGG + chr7_3:67111473-67111492 None:intergenic 20.0%
!!! TTTGTTATTTCAAAAGAAGA+TGG - chr7_3:67111583-67111602 Msa1118450:intron 20.0%
!! AGTTAGAAAAAGACATATAT+TGG - chr7_3:67111890-67111909 Msa1118450:intron 20.0%
!! AAAAAGACATATATTGGTAT+TGG - chr7_3:67111896-67111915 Msa1118450:intron 20.0%
!! CAACCAAATAAATAAAGAAA+TGG + chr7_3:67111987-67112006 None:intergenic 20.0%
!!! AAAGTATTAATAAAGCTGAA+AGG + chr7_3:67112169-67112188 None:intergenic 20.0%
!! AAAGCACATAATCTTATTAT+AGG - chr7_3:67112334-67112353 Msa1118450:CDS 20.0%
!! GAAGAATCAAATAATATCAT+AGG + chr7_3:67113166-67113185 None:intergenic 20.0%
!! ATGATATTATTTGATTCTTC+TGG - chr7_3:67113166-67113185 Msa1118450:CDS 20.0%
!!! CAGAAATTGATTTTTTCATA+GGG - chr7_3:67113805-67113824 Msa1118450:CDS 20.0%
!! TAAGAAAAATATCTACATGT+TGG + chr7_3:67113893-67113912 None:intergenic 20.0%
! GTTTCTTTATGTGATTCTAT+TGG - chr7_3:67109553-67109572 Msa1118450:CDS 25.0%
! ATTTGAAGATTTATATGAGC+TGG - chr7_3:67109601-67109620 Msa1118450:intron 25.0%
! CGACTATTTCAAGATTTATA+TGG - chr7_3:67109652-67109671 Msa1118450:intron 25.0%
!! TAATTCATTGCATGTTACTT+TGG - chr7_3:67110021-67110040 Msa1118450:intron 25.0%
! GAGATTGCATAACAAAATTA+AGG - chr7_3:67110066-67110085 Msa1118450:intron 25.0%
!! TCAACATATCTAGTTTCATA+AGG + chr7_3:67110286-67110305 None:intergenic 25.0%
! GAAATCCATGTATAATACAA+AGG + chr7_3:67110629-67110648 None:intergenic 25.0%
! AAGAAACTGGTTAGAAAAAT+TGG + chr7_3:67110670-67110689 None:intergenic 25.0%
!!! TTTTGTGTTATGTTTTAGCT+TGG - chr7_3:67110849-67110868 Msa1118450:intron 25.0%
! AATTTACGATCATAGAGAAT+TGG + chr7_3:67110896-67110915 None:intergenic 25.0%
! GATGTTCAATATAGATGTTA+AGG + chr7_3:67111069-67111088 None:intergenic 25.0%
! AACATCTATATTGAACATCT+AGG - chr7_3:67111070-67111089 Msa1118450:intron 25.0%
! ATTATATTTCAAAGATCGCA+TGG + chr7_3:67111230-67111249 None:intergenic 25.0%
!!! GCGATCTTTGAAATATAATA+AGG - chr7_3:67111231-67111250 Msa1118450:intron 25.0%
! AAACAGTAAAAACAGCATAT+GGG + chr7_3:67112440-67112459 None:intergenic 25.0%
! AAAACAGTAAAAACAGCATA+TGG + chr7_3:67112441-67112460 None:intergenic 25.0%
! TTGAATGAATGATCTTTGAT+GGG + chr7_3:67112533-67112552 None:intergenic 25.0%
! TTGAAGTTTGTAATTTATGC+AGG - chr7_3:67112593-67112612 Msa1118450:intron 25.0%
! ATGATGATTATTCACTAGAA+TGG - chr7_3:67112632-67112651 Msa1118450:intron 25.0%
! TGATGATTATTCACTAGAAT+GGG - chr7_3:67112633-67112652 Msa1118450:intron 25.0%
! TTATCACATATCAACAAGAT+TGG + chr7_3:67112810-67112829 None:intergenic 25.0%
! TAATGTATACTGCATGTTAT+TGG - chr7_3:67112827-67112846 Msa1118450:CDS 25.0%
!! AGATTTTGTCTACCAAAATA+TGG - chr7_3:67112857-67112876 Msa1118450:intron 25.0%
!! GATTTTGTCTACCAAAATAT+GGG - chr7_3:67112858-67112877 Msa1118450:intron 25.0%
! TGTCAAAAAAAAAACTGAAG+TGG - chr7_3:67112969-67112988 Msa1118450:CDS 25.0%
!!! ATGGATTTTGGCTTTTTAAT+TGG - chr7_3:67113746-67113765 Msa1118450:intron 25.0%
! ATGAAAAAATCAATTTCTGC+TGG + chr7_3:67113804-67113823 None:intergenic 25.0%
!!! GCAGAAATTGATTTTTTCAT+AGG - chr7_3:67113804-67113823 Msa1118450:CDS 25.0%
!!! ATTGATTTTTTCATAGGGTT+AGG - chr7_3:67113810-67113829 Msa1118450:CDS 25.0%
! AACAGTAACGAATGTAATTT+AGG - chr7_3:67113834-67113853 Msa1118450:CDS 25.0%
TTGAAAAAGAGAATGAGAAG+AGG + chr7_3:67109314-67109333 None:intergenic 30.0%
AGTGAAAAGAAGAAATGGAT+TGG + chr7_3:67109343-67109362 None:intergenic 30.0%
AAGACAGTGAAAAGAAGAAA+TGG + chr7_3:67109348-67109367 None:intergenic 30.0%
! TTTTCACTGTCTTCTTTCTA+GGG - chr7_3:67109355-67109374 Msa1118450:CDS 30.0%
ATTTGTTTCGTTGCACTTTA+GGG - chr7_3:67109440-67109459 Msa1118450:CDS 30.0%
! CGAAAATTATAGCTTTTTGC+TGG + chr7_3:67109475-67109494 None:intergenic 30.0%
TTATGTGATTCTATTGGGTT+TGG - chr7_3:67109559-67109578 Msa1118450:CDS 30.0%
CTTGTTTCCTAGATAGTAAT+TGG - chr7_3:67109734-67109753 Msa1118450:intron 30.0%
! AAACATAACTTGCACACATT+TGG + chr7_3:67109810-67109829 None:intergenic 30.0%
TGATATTGAAAGTCCAACTT+TGG - chr7_3:67109883-67109902 Msa1118450:intron 30.0%
GATATTGAAAGTCCAACTTT+GGG - chr7_3:67109884-67109903 Msa1118450:intron 30.0%
!! ATTTTGTTATGCAATCTCTC+AGG + chr7_3:67110064-67110083 None:intergenic 30.0%
! ATATTTCCCATTTTCTGACA+CGG + chr7_3:67110373-67110392 None:intergenic 30.0%
AAACTGGTTAGAAAAATTGG+AGG + chr7_3:67110667-67110686 None:intergenic 30.0%
!!! AGGAAATTTTTTCTTCCAGT+TGG + chr7_3:67110723-67110742 None:intergenic 30.0%
TTCCTGTACATTACCATATA+TGG - chr7_3:67110738-67110757 Msa1118450:intron 30.0%
! ATCCATATATGGTAATGTAC+AGG + chr7_3:67110743-67110762 None:intergenic 30.0%
AATTCAATTCTTCAGAGTCT+TGG - chr7_3:67110912-67110931 Msa1118450:intron 30.0%
ATTCAATTCTTCAGAGTCTT+GGG - chr7_3:67110913-67110932 Msa1118450:intron 30.0%
AAAAACCAACCAAAAGGATT+GGG + chr7_3:67111098-67111117 None:intergenic 30.0%
AAAAAACCAACCAAAAGGAT+TGG + chr7_3:67111099-67111118 None:intergenic 30.0%
TGAAGAAAAAACCAACCAAA+AGG + chr7_3:67111104-67111123 None:intergenic 30.0%
! TATACGGTGAGCTAAATTTT+TGG - chr7_3:67111145-67111164 Msa1118450:intron 30.0%
! ATACGGTGAGCTAAATTTTT+GGG - chr7_3:67111146-67111165 Msa1118450:intron 30.0%
!! ATTGGTAATGATTCTGAAAG+TGG - chr7_3:67111914-67111933 Msa1118450:intron 30.0%
CAATACAATTGCTTCATGAA+TGG - chr7_3:67112129-67112148 Msa1118450:CDS 30.0%
!! TGCATTTGCATAGTCATTTT+AGG - chr7_3:67112211-67112230 Msa1118450:intron 30.0%
! AGTAGATGAAATGGTTTTCA+TGG - chr7_3:67112254-67112273 Msa1118450:intron 30.0%
CTTGAATGAATGATCTTTGA+TGG + chr7_3:67112534-67112553 None:intergenic 30.0%
CATCAAAGATCATTCATTCA+AGG - chr7_3:67112532-67112551 Msa1118450:CDS 30.0%
! CTATTCCACATTTTTCCTTT+AGG + chr7_3:67112703-67112722 None:intergenic 30.0%
! ATTCAGTAGGCATAATTTTC+GGG + chr7_3:67112901-67112920 None:intergenic 30.0%
! CATTCAGTAGGCATAATTTT+CGG + chr7_3:67112902-67112921 None:intergenic 30.0%
!! TTATAGTGGATCAGAATTCA+GGG + chr7_3:67113020-67113039 None:intergenic 30.0%
!! TTTATAGTGGATCAGAATTC+AGG + chr7_3:67113021-67113040 None:intergenic 30.0%
CAATTATAGAAGCTGAGTTA+TGG + chr7_3:67113056-67113075 None:intergenic 30.0%
AAATCTTCCATTCAGATAGA+TGG - chr7_3:67113077-67113096 Msa1118450:CDS 30.0%
ACTTTATCCATCTATCTGAA+TGG + chr7_3:67113087-67113106 None:intergenic 30.0%
! GATATTTTTCTTACTTTGCC+TGG - chr7_3:67113900-67113919 Msa1118450:CDS 30.0%
TAGATTTGACATGATTGTTC+AGG + chr7_3:67113943-67113962 None:intergenic 30.0%
GAACAATCATGTCAAATCTA+TGG - chr7_3:67113943-67113962 Msa1118450:five_prime_UTR 30.0%
AAGTAACAACTAGAGTGATG+AGG - chr7_3:67109117-67109136 Msa1118450:three_prime_UTR 35.0%
GAAAGAAGAGAAAAAGAACG+AGG + chr7_3:67109223-67109242 None:intergenic 35.0%
AGGAGAAGATTGATCATTGT+TGG + chr7_3:67109267-67109286 None:intergenic 35.0%
! CTTTTCACTGTCTTCTTTCT+AGG - chr7_3:67109354-67109373 Msa1118450:CDS 35.0%
!! ACCGCTAATTCATTTTTCCT+AGG - chr7_3:67109389-67109408 Msa1118450:CDS 35.0%
CCCTAGGAAAAATGAATTAG+CGG + chr7_3:67109393-67109412 None:intergenic 35.0%
!! CCGCTAATTCATTTTTCCTA+GGG - chr7_3:67109390-67109409 Msa1118450:CDS 35.0%
AAAATGGAGAAAGAAACCCT+AGG + chr7_3:67109409-67109428 None:intergenic 35.0%
! GATTTGTTTCGTTGCACTTT+AGG - chr7_3:67109439-67109458 Msa1118450:CDS 35.0%
AGTGACACCAATTACTATCT+AGG + chr7_3:67109744-67109763 None:intergenic 35.0%
GCACACATTTGGATAATTGA+TGG + chr7_3:67109799-67109818 None:intergenic 35.0%
! TGTATCTCCTTCCTTACTTT+TGG - chr7_3:67109907-67109926 Msa1118450:intron 35.0%
!! GTATCTCCTTCCTTACTTTT+GGG - chr7_3:67109908-67109927 Msa1118450:intron 35.0%
!! TATCTCCTTCCTTACTTTTG+GGG - chr7_3:67109909-67109928 Msa1118450:intron 35.0%
!! AATTGCTGTTTCTTATGTGC+AGG - chr7_3:67110179-67110198 Msa1118450:intron 35.0%
ATGTGCAGGAATAATACTCT+TGG - chr7_3:67110193-67110212 Msa1118450:intron 35.0%
CAAGATCGATTGTGAAATAC+CGG - chr7_3:67110309-67110328 Msa1118450:CDS 35.0%
AAGATCGATTGTGAAATACC+GGG - chr7_3:67110310-67110329 Msa1118450:CDS 35.0%
GTTACAGTTGCACTTAAAGA+AGG - chr7_3:67110337-67110356 Msa1118450:CDS 35.0%
TTTCTTCCGTGTCAGAAAAT+GGG - chr7_3:67110364-67110383 Msa1118450:CDS 35.0%
TATAGCAGTTCAATGGCTAT+AGG - chr7_3:67110558-67110577 Msa1118450:intron 35.0%
GGTATGAAATTATTGCCAAC+TGG - chr7_3:67110705-67110724 Msa1118450:intron 35.0%
CATTACCATATATGGATCAG+TGG - chr7_3:67110746-67110765 Msa1118450:intron 35.0%
!! TGGTGAGTTTGGTTCATTTT+TGG - chr7_3:67110766-67110785 Msa1118450:intron 35.0%
!!! TTATGTTTTAGCTTGGAGCT+GGG - chr7_3:67110856-67110875 Msa1118450:intron 35.0%
TCATAGAGAATTGGTGCAAA+AGG + chr7_3:67110887-67110906 None:intergenic 35.0%
AAATAGACAGGTACACTTAC+CGG + chr7_3:67110960-67110979 None:intergenic 35.0%
ATATTTCAAAGATCGCATGG+TGG + chr7_3:67111227-67111246 None:intergenic 35.0%
GTCTTCCATCATATGGAATT+TGG - chr7_3:67111435-67111454 Msa1118450:CDS 35.0%
ACACACCAAATTCCATATGA+TGG + chr7_3:67111443-67111462 None:intergenic 35.0%
! ACTTTACCTCTATGATTTGC+AGG - chr7_3:67111492-67111511 Msa1118450:CDS 35.0%
!!! TGGAACTACTTTTGTTTTGC+AGG - chr7_3:67111657-67111676 Msa1118450:intron 35.0%
CAAAACATGTCACATATGAC+AGG + chr7_3:67111740-67111759 None:intergenic 35.0%
! CATATGTGACATGTTTTGCT+AGG - chr7_3:67111742-67111761 Msa1118450:intron 35.0%
!! ATATTTTTGATGCAGCTGCA+CGG - chr7_3:67111949-67111968 Msa1118450:intron 35.0%
! CTTGATAATACTCTTGCAGT+TGG - chr7_3:67112065-67112084 Msa1118450:intron 35.0%
!!! TTTTAGGTTTGTCTTGTCCA+AGG - chr7_3:67112227-67112246 Msa1118450:intron 35.0%
!! TGCTAACAACTTGCTACTAA+GGG - chr7_3:67112277-67112296 Msa1118450:intron 35.0%
! TCATTCATTCAAGGCATTCA+AGG - chr7_3:67112541-67112560 Msa1118450:CDS 35.0%
! TTCCACATTTTTCCTTTAGG+AGG + chr7_3:67112700-67112719 None:intergenic 35.0%
!!! TTGCTTTAGAGCCACTTTTA+GGG + chr7_3:67112726-67112745 None:intergenic 35.0%
TTGGTAGACAAAATCTTGCT+TGG + chr7_3:67112853-67112872 None:intergenic 35.0%
! AAGACAGACTACCCATATTT+TGG + chr7_3:67112872-67112891 None:intergenic 35.0%
! TGATTCTGGTTACATTCAGT+AGG + chr7_3:67112914-67112933 None:intergenic 35.0%
AATTCAGGGCATATGCATAT+TGG + chr7_3:67113006-67113025 None:intergenic 35.0%
! GACATCAAAGTGCTTTATAG+TGG + chr7_3:67113034-67113053 None:intergenic 35.0%
TTTCTGATTTCTTGACCTCT+GGG - chr7_3:67113237-67113256 Msa1118450:intron 35.0%
! GTGCTATTACTGAAAACAAG+TGG - chr7_3:67113360-67113379 Msa1118450:intron 35.0%
TAATTCGCTTTCTCTGTTTC+AGG - chr7_3:67113436-67113455 Msa1118450:intron 35.0%
!! AAACTTCTGGGACTCAATTA+GGG - chr7_3:67113491-67113510 Msa1118450:intron 35.0%
TATTCAACATTCCACAAGAC+CGG - chr7_3:67113523-67113542 Msa1118450:intron 35.0%
CAACAGAAAGAAGTTCACAA+AGG - chr7_3:67113546-67113565 Msa1118450:intron 35.0%
AGAAGTTCACAAAGGAAGAA+TGG - chr7_3:67113554-67113573 Msa1118450:intron 35.0%
GAAGTTCACAAAGGAAGAAT+GGG - chr7_3:67113555-67113574 Msa1118450:intron 35.0%
! AAAGCAAGCTTTAGCTGAAT+GGG - chr7_3:67113600-67113619 Msa1118450:intron 35.0%
TAACAACTAGAGTGATGAGG+TGG - chr7_3:67109120-67109139 Msa1118450:three_prime_UTR 40.0%
AGAGAAAAAGAACGAGGTTG+AGG + chr7_3:67109217-67109236 None:intergenic 40.0%
! TTGTTACCTTTGAGGGTGAT+AGG + chr7_3:67109287-67109306 None:intergenic 40.0%
AGGAGAGTTGTTACCTTTGA+GGG + chr7_3:67109294-67109313 None:intergenic 40.0%
GCTGGTTGATCTTCATTTGT+CGG - chr7_3:67109619-67109638 Msa1118450:intron 40.0%
! TTGATCTTCATTTGTCGGCT+GGG - chr7_3:67109624-67109643 Msa1118450:intron 40.0%
GGTATCTCAAGATTGAAGCT+CGG - chr7_3:67109989-67110008 Msa1118450:intron 40.0%
AGTGCATAACACCTTCCTAT+CGG - chr7_3:67110105-67110124 Msa1118450:intron 40.0%
GCAGGAATAATACTCTTGGA+TGG - chr7_3:67110197-67110216 Msa1118450:intron 40.0%
GTTTCTTCCGTGTCAGAAAA+TGG - chr7_3:67110363-67110382 Msa1118450:CDS 40.0%
CTGCACGAATTGTTGTAGAA+CGG + chr7_3:67110449-67110468 None:intergenic 40.0%
ATCCAACTGCAAGACTAATG+AGG + chr7_3:67110488-67110507 None:intergenic 40.0%
TGGATTGATATTGCTGCTGT+TGG - chr7_3:67110503-67110522 Msa1118450:intron 40.0%
ACTCACCACTGATCCATATA+TGG + chr7_3:67110754-67110773 None:intergenic 40.0%
ATATGGATCAGTGGTGAGTT+TGG - chr7_3:67110755-67110774 Msa1118450:intron 40.0%
!!! GTTATGTTTTAGCTTGGAGC+TGG - chr7_3:67110855-67110874 Msa1118450:intron 40.0%
! ATCTAGGTTCCCAATCCTTT+TGG - chr7_3:67111086-67111105 Msa1118450:intron 40.0%
AGTTGACAATTCTTGCCTAG+CGG + chr7_3:67111415-67111434 None:intergenic 40.0%
GTCAACTGTCTTCCATCATA+TGG - chr7_3:67111428-67111447 Msa1118450:CDS 40.0%
GTTGCTCTTTCTGTACTACT+GGG - chr7_3:67111514-67111533 Msa1118450:CDS 40.0%
TGTACTACTGGGTATCATCT+TGG - chr7_3:67111525-67111544 Msa1118450:CDS 40.0%
GGTTGCTCAGTTTGTGAAAT+GGG - chr7_3:67111621-67111640 Msa1118450:intron 40.0%
CATTTCATCTACTGCTTCCT+TGG + chr7_3:67112247-67112266 None:intergenic 40.0%
CAAGGAAGCAGTAGATGAAA+TGG - chr7_3:67112245-67112264 Msa1118450:intron 40.0%
!! GTGCTAACAACTTGCTACTA+AGG - chr7_3:67112276-67112295 Msa1118450:intron 40.0%
CTTGCTACTAAGGGATGAAT+TGG - chr7_3:67112286-67112305 Msa1118450:intron 40.0%
! TTTGATGGGTCACGACAAAA+GGG + chr7_3:67112519-67112538 None:intergenic 40.0%
TATTCACTAGAATGGGTGAG+AGG - chr7_3:67112640-67112659 Msa1118450:intron 40.0%
CACCTCCTAAAGGAAAAATG+TGG - chr7_3:67112695-67112714 Msa1118450:intron 40.0%
ATGTGGAATAGCCCTAAAAG+TGG - chr7_3:67112712-67112731 Msa1118450:CDS 40.0%
!!! GTTGCTTTAGAGCCACTTTT+AGG + chr7_3:67112727-67112746 None:intergenic 40.0%
CAATGTGGAACAACCCTAAA+AGG - chr7_3:67112746-67112765 Msa1118450:CDS 40.0%
GTTTCTGATTTCTTGACCTC+TGG - chr7_3:67113236-67113255 Msa1118450:intron 40.0%
GTGTTGTATCACCATCTTCT+GGG - chr7_3:67113458-67113477 Msa1118450:intron 40.0%
AATTGAGTCCCAGAAGTTTG+TGG + chr7_3:67113490-67113509 None:intergenic 40.0%
!! CAAACTTCTGGGACTCAATT+AGG - chr7_3:67113490-67113509 Msa1118450:intron 40.0%
!! AACTTCTGGGACTCAATTAG+GGG - chr7_3:67113492-67113511 Msa1118450:intron 40.0%
TGTGAACTTCTTTCTGTTGC+CGG + chr7_3:67113545-67113564 None:intergenic 40.0%
! TTCAGCTAAAGCTTGCTTTG+TGG + chr7_3:67113599-67113618 None:intergenic 40.0%
! CAAAGCAAGCTTTAGCTGAA+TGG - chr7_3:67113599-67113618 Msa1118450:intron 40.0%
!! CAGGAAGTGGAAATGGATTT+TGG - chr7_3:67113734-67113753 Msa1118450:intron 40.0%
GCTTACAGTTTGGAAAATCC+AGG + chr7_3:67113921-67113940 None:intergenic 40.0%
GATTGTTCAGGCTTACAGTT+TGG + chr7_3:67113931-67113950 None:intergenic 40.0%
AAGCGCCATCAGCAAATTCA+AGG - chr7_3:67109175-67109194 Msa1118450:three_prime_UTR 45.0%
AGCGCCATCAGCAAATTCAA+GGG - chr7_3:67109176-67109195 Msa1118450:three_prime_UTR 45.0%
!! GCAACCCTTGAATTTGCTGA+TGG + chr7_3:67109183-67109202 None:intergenic 45.0%
TCTTCTCCTATCACCCTCAA+AGG - chr7_3:67109278-67109297 Msa1118450:exon 45.0%
GAGGAGAGTTGTTACCTTTG+AGG + chr7_3:67109295-67109314 None:intergenic 45.0%
GTTGATCTTCATTTGTCGGC+TGG - chr7_3:67109623-67109642 Msa1118450:intron 45.0%
GAAGGAGATACACCCAAAGT+TGG + chr7_3:67109899-67109918 None:intergenic 45.0%
ATCAGACTGCCCCAAAAGTA+AGG + chr7_3:67109921-67109940 None:intergenic 45.0%
CTCTCAGGAATTGCAACAGA+TGG + chr7_3:67110049-67110068 None:intergenic 45.0%
! TGGATGGTGTCAGTGTGAAA+AGG - chr7_3:67110213-67110232 Msa1118450:intron 45.0%
GTCAGTGTGAAAAGGATGAC+TGG - chr7_3:67110221-67110240 Msa1118450:intron 45.0%
AGTGTGAAAAGGATGACTGG+AGG - chr7_3:67110224-67110243 Msa1118450:intron 45.0%
GTGTGAAAAGGATGACTGGA+GGG - chr7_3:67110225-67110244 Msa1118450:intron 45.0%
TGTGAAAAGGATGACTGGAG+GGG - chr7_3:67110226-67110245 Msa1118450:intron 45.0%
AGTGCAACTGTAACTGAACC+CGG + chr7_3:67110331-67110350 None:intergenic 45.0%
TGGCTCCAATTGTTAGCAGT+TGG - chr7_3:67110523-67110542 Msa1118450:intron 45.0%
GGCTCCAATTGTTAGCAGTT+GGG - chr7_3:67110524-67110543 Msa1118450:intron 45.0%
GGAACCCAACTGCTAACAAT+TGG + chr7_3:67110531-67110550 None:intergenic 45.0%
TTTCTTCCGACTGTGATGCA+GGG - chr7_3:67110684-67110703 Msa1118450:intron 45.0%
TTCATACCCTGCATCACAGT+CGG + chr7_3:67110693-67110712 None:intergenic 45.0%
GAGTGAAGAGATGCACAATC+CGG - chr7_3:67110938-67110957 Msa1118450:CDS 45.0%
! AGGTTCCCAATCCTTTTGGT+TGG - chr7_3:67111090-67111109 Msa1118450:intron 45.0%
TCAGCAGAGAATAGCTGCTA+AGG - chr7_3:67111287-67111306 Msa1118450:intron 45.0%
AATATGGCCAGCAAGCATCA+GGG + chr7_3:67111385-67111404 None:intergenic 45.0%
AAATATGGCCAGCAAGCATC+AGG + chr7_3:67111386-67111405 None:intergenic 45.0%
GAGCAACCTGCAAATCATAG+AGG + chr7_3:67111501-67111520 None:intergenic 45.0%
GGTTGCTCTTTCTGTACTAC+TGG - chr7_3:67111513-67111532 Msa1118450:CDS 45.0%
CTTTAGGCTACTGGATTGTC+AGG - chr7_3:67111557-67111576 Msa1118450:intron 45.0%
TTTCACAAACTGAGCAACCC+CGG + chr7_3:67111620-67111639 None:intergenic 45.0%
GGGTTGCTCAGTTTGTGAAA+TGG - chr7_3:67111620-67111639 Msa1118450:intron 45.0%
AAATGGGCAATGCGCGTTAT+TGG - chr7_3:67111637-67111656 Msa1118450:intron 45.0%
! ATTCTGAAAGTGGCGTAGCT+TGG - chr7_3:67111924-67111943 Msa1118450:intron 45.0%
AACAGCTCCACAAAAGACCA+AGG + chr7_3:67112093-67112112 None:intergenic 45.0%
! CTTTGATGGGTCACGACAAA+AGG + chr7_3:67112520-67112539 None:intergenic 45.0%
!! CTTTAGGAGGTGACTTGCTA+AGG + chr7_3:67112687-67112706 None:intergenic 45.0%
CTTAGCAAGTCACCTCCTAA+AGG - chr7_3:67112685-67112704 Msa1118450:intron 45.0%
!! GTGGCTCTAAAGCAACAATG+TGG - chr7_3:67112731-67112750 Msa1118450:CDS 45.0%
ACAACCCTAAAAGGACGTCA+TGG - chr7_3:67112755-67112774 Msa1118450:CDS 45.0%
! CAGACCATGACGTCCTTTTA+GGG + chr7_3:67112762-67112781 None:intergenic 45.0%
! TCAGACCATGACGTCCTTTT+AGG + chr7_3:67112763-67112782 None:intergenic 45.0%
TGGAAAGACATACCTCTCAC+AGG + chr7_3:67112790-67112809 None:intergenic 45.0%
! GGTGTTGTATCACCATCTTC+TGG - chr7_3:67113457-67113476 Msa1118450:intron 45.0%
! GGTTTTCGCCACAAACTTCT+GGG - chr7_3:67113479-67113498 Msa1118450:intron 45.0%
CATCTCCAGAATTCACTGAC+TGG - chr7_3:67113626-67113645 Msa1118450:intron 45.0%
ACGATCCAGTCAGTGAATTC+TGG + chr7_3:67113634-67113653 None:intergenic 45.0%
!! GCAGTTTTATCCGATCTGCA+TGG + chr7_3:67113660-67113679 None:intergenic 45.0%
CGAGACAATGGAGAGTGAAT+CGG - chr7_3:67113699-67113718 Msa1118450:intron 45.0%
GTTGGCGAGTGAAGAAGTGA+AGG + chr7_3:67109249-67109268 None:intergenic 50.0%
AACACCTGCAGTTGTAACGC+AGG + chr7_3:67109864-67109883 None:intergenic 50.0%
GACTGCCCCAAAAGTAAGGA+AGG + chr7_3:67109917-67109936 None:intergenic 50.0%
TTGGGGCAGTCTGATACTCA+AGG - chr7_3:67109926-67109945 Msa1118450:intron 50.0%
! TGTGAGCGCGTTCAAGTTTC+TGG - chr7_3:67109968-67109987 Msa1118450:intron 50.0%
AACACCTTCCTATCGGCATC+TGG - chr7_3:67110112-67110131 Msa1118450:intron 50.0%
ACACCTTCCTATCGGCATCT+GGG - chr7_3:67110113-67110132 Msa1118450:intron 50.0%
! ACTGGAGGGGTGTACAGAAA+GGG - chr7_3:67110239-67110258 Msa1118450:intron 50.0%
GGGGTGTACAGAAAGGGATT+TGG - chr7_3:67110245-67110264 Msa1118450:intron 50.0%
!! CGCCTCATTAGTCTTGCAGT+TGG - chr7_3:67110483-67110502 Msa1118450:intron 50.0%
GCATCACAGTCGGAAGAAAC+TGG + chr7_3:67110683-67110702 None:intergenic 50.0%
GTTTCTTCCGACTGTGATGC+AGG - chr7_3:67110683-67110702 Msa1118450:intron 50.0%
AGCAGCTATTCTCTGCTGAC+TGG + chr7_3:67111286-67111305 None:intergenic 50.0%
GCAGAGAATAGCTGCTAAGG+TGG - chr7_3:67111290-67111309 Msa1118450:intron 50.0%
GCCATATTTGCTTGTCCGCT+AGG - chr7_3:67111397-67111416 Msa1118450:CDS 50.0%
! GCCTAGCGGACAAGCAAATA+TGG + chr7_3:67111401-67111420 None:intergenic 50.0%
CTACTGGGTATCATCTTGGC+TGG - chr7_3:67111529-67111548 Msa1118450:CDS 50.0%
! ATCTTGGCTGGAGCTGCTTT+AGG - chr7_3:67111541-67111560 Msa1118450:intron 50.0%
GAAGATGGCAGTGTAGATGC+CGG - chr7_3:67111598-67111617 Msa1118450:intron 50.0%
AAGATGGCAGTGTAGATGCC+GGG - chr7_3:67111599-67111618 Msa1118450:intron 50.0%
TACTCTTGCAGTTGGAGCCT+TGG - chr7_3:67112073-67112092 Msa1118450:intron 50.0%
!! GTTGGAGCCTTGGTCTTTTG+TGG - chr7_3:67112083-67112102 Msa1118450:intron 50.0%
GATTTCTTGACCTCTGGGTC+TGG - chr7_3:67113242-67113261 Msa1118450:intron 50.0%
TGTGGCGAAAACCCAGAAGA+TGG + chr7_3:67113472-67113491 None:intergenic 50.0%
! GGGTTTTCGCCACAAACTTC+TGG - chr7_3:67113478-67113497 Msa1118450:intron 50.0%
TCTTTCTGTTGCCGGTCTTG+TGG + chr7_3:67113537-67113556 None:intergenic 50.0%
GGATCGTTGACCATGCAGAT+CGG - chr7_3:67113647-67113666 Msa1118450:intron 50.0%
GAGTGAATCGGATTCCACAG+AGG - chr7_3:67113711-67113730 Msa1118450:intron 50.0%
ATTTCCACTTCCTGCCTCTG+TGG + chr7_3:67113728-67113747 None:intergenic 50.0%
ACAGAGGCAGGAAGTGGAAA+TGG - chr7_3:67113727-67113746 Msa1118450:intron 50.0%
AGTGCCTGCGTTACAACTGC+AGG - chr7_3:67109857-67109876 Msa1118450:intron 55.0%
GTATGCTCCCAGATGCCGAT+AGG + chr7_3:67110123-67110142 None:intergenic 55.0%
! GACTGGAGGGGTGTACAGAA+AGG - chr7_3:67110238-67110257 Msa1118450:intron 55.0%
ACATGTGCCCTGATGCTTGC+TGG - chr7_3:67111375-67111394 Msa1118450:intron 55.0%
! CTGGAGCTGCTTTAGGCTAC+TGG - chr7_3:67111548-67111567 Msa1118450:intron 55.0%
AGATGGCAGTGTAGATGCCG+GGG - chr7_3:67111600-67111619 Msa1118450:intron 55.0%
TAAGGAATTCCGCCCGACCA+CGG + chr7_3:67112669-67112688 None:intergenic 55.0%
TGGTCTGACTCTCCTGTGAG+AGG - chr7_3:67112775-67112794 Msa1118450:CDS 55.0%
ACTGCTTCCGAGCGAGAGTT+CGG - chr7_3:67113675-67113694 Msa1118450:intron 55.0%
CGAGAGTTCGGACGAGACAA+TGG - chr7_3:67113687-67113706 Msa1118450:intron 55.0%
GAATCGGATTCCACAGAGGC+AGG - chr7_3:67113715-67113734 Msa1118450:intron 55.0%
GATTCCACAGAGGCAGGAAG+TGG - chr7_3:67113721-67113740 Msa1118450:intron 55.0%
GCTCCCAGATGCCGATAGGA+AGG + chr7_3:67110119-67110138 None:intergenic 60.0%
GAATGGGTGAGAGGAACCCG+TGG - chr7_3:67112649-67112668 Msa1118450:intron 60.0%
AAGGAATTCCGCCCGACCAC+GGG + chr7_3:67112668-67112687 None:intergenic 60.0%
! TGACCTCTGGGTCTGGCTTG+TGG - chr7_3:67113249-67113268 Msa1118450:intron 60.0%
TCACCACAAGCCAGACCCAG+AGG + chr7_3:67113255-67113274 None:intergenic 60.0%
GTCTCGTCCGAACTCTCGCT+CGG + chr7_3:67113685-67113704 None:intergenic 60.0%
GGGTGAGAGGAACCCGTGGT+CGG - chr7_3:67112653-67112672 Msa1118450:intron 65.0%
GGTGAGAGGAACCCGTGGTC+GGG - chr7_3:67112654-67112673 Msa1118450:intron 65.0%
GAGAGGAACCCGTGGTCGGG+CGG - chr7_3:67112657-67112676 Msa1118450:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 67109079 67113989 67109079 ID=Msa1118450;Name=Msa1118450
chr7_3 mRNA 67109079 67113989 67109079 ID=Msa1118450-mRNA-1;Parent=Msa1118450;Name=Msa1118450-mRNA-1;_AED=0.17;_eAED=0.17;_QI=55|1|1|1|1|1|10|218|533
chr7_3 exon 67109079 67109610 67109079 ID=Msa1118450-mRNA-1:exon:16447;Parent=Msa1118450-mRNA-1
chr7_3 exon 67110272 67110453 67110272 ID=Msa1118450-mRNA-1:exon:16446;Parent=Msa1118450-mRNA-1
chr7_3 exon 67110918 67111009 67110918 ID=Msa1118450-mRNA-1:exon:16445;Parent=Msa1118450-mRNA-1
chr7_3 exon 67111390 67111554 67111390 ID=Msa1118450-mRNA-1:exon:16444;Parent=Msa1118450-mRNA-1
chr7_3 exon 67112109 67112201 67112109 ID=Msa1118450-mRNA-1:exon:16443;Parent=Msa1118450-mRNA-1
chr7_3 exon 67112301 67112363 67112301 ID=Msa1118450-mRNA-1:exon:16442;Parent=Msa1118450-mRNA-1
chr7_3 exon 67112454 67112599 67112454 ID=Msa1118450-mRNA-1:exon:16441;Parent=Msa1118450-mRNA-1
chr7_3 exon 67112710 67112867 67112710 ID=Msa1118450-mRNA-1:exon:16440;Parent=Msa1118450-mRNA-1
chr7_3 exon 67112967 67113189 67112967 ID=Msa1118450-mRNA-1:exon:16439;Parent=Msa1118450-mRNA-1
chr7_3 exon 67113769 67113989 67113769 ID=Msa1118450-mRNA-1:exon:16438;Parent=Msa1118450-mRNA-1
chr7_3 five_prime_UTR 67113935 67113989 67113935 ID=Msa1118450-mRNA-1:five_prime_utr;Parent=Msa1118450-mRNA-1
chr7_3 CDS 67113769 67113934 67113769 ID=Msa1118450-mRNA-1:cds;Parent=Msa1118450-mRNA-1
chr7_3 CDS 67112967 67113189 67112967 ID=Msa1118450-mRNA-1:cds;Parent=Msa1118450-mRNA-1
chr7_3 CDS 67112710 67112867 67112710 ID=Msa1118450-mRNA-1:cds;Parent=Msa1118450-mRNA-1
chr7_3 CDS 67112454 67112599 67112454 ID=Msa1118450-mRNA-1:cds;Parent=Msa1118450-mRNA-1
chr7_3 CDS 67112301 67112363 67112301 ID=Msa1118450-mRNA-1:cds;Parent=Msa1118450-mRNA-1
chr7_3 CDS 67112109 67112201 67112109 ID=Msa1118450-mRNA-1:cds;Parent=Msa1118450-mRNA-1
chr7_3 CDS 67111390 67111554 67111390 ID=Msa1118450-mRNA-1:cds;Parent=Msa1118450-mRNA-1
chr7_3 CDS 67110918 67111009 67110918 ID=Msa1118450-mRNA-1:cds;Parent=Msa1118450-mRNA-1
chr7_3 CDS 67110272 67110453 67110272 ID=Msa1118450-mRNA-1:cds;Parent=Msa1118450-mRNA-1
chr7_3 CDS 67109297 67109610 67109297 ID=Msa1118450-mRNA-1:cds;Parent=Msa1118450-mRNA-1
chr7_3 three_prime_UTR 67109079 67109296 67109079 ID=Msa1118450-mRNA-1:three_prime_utr;Parent=Msa1118450-mRNA-1
Gene Sequence

>Msa1118450

ATGAGGTGGAGTAAAACAAAAAAATCAAATTCGATGGGAAGAAGCGCCATCAGCAAATTCAAGGGTTGCTTCTCTCTCAACCTCAACCTCGTTCTTTTTCTCTTCTTTCTCTCCTTCACTTCTTCACTCGCCAACAATGATCAATCTTCTCCTATCACCCTCAAAGGTGTTGATATTGAAAGTCCAACTTTGGGTGTATCTCCTTCCTTACTTTTGGGGCAGTCTGATACTCAAGGTGCTAAAAACATTATGCGATGTGAGCGCGTTCAAGTTTCTGGTATCTCAAGATTGAAGCTCGGAAGTTATGCTAATTCATTGCATGTTACTTTGGCTCCATCTGTTGCAATTCCTGAGAGATTGCATAACAAAATTAAGGTTTGTTTTCATAGGAATAATACTCTTGGATGGTGTCAGTGTGAAAAGGATGACTGGAGGGGTGTACAGAAAGGGATTTGGAGTGCAGTCATGTCACCTTATGAAACTAGATATGTTGATGTCAAGATCGATTGTGAAATACCGGGTTCAGTTACAGTTGCACTTAAAGAAGATTTTCAGCAATTGCGCCTCATTAGTCTTGCAGTTGGATTGATATTGCTGCTGTTGGCTCCAATTGTTAGCAGTTGGGTTCCATTTTATTATAGCAGTTCAATGGCTATAGGAATCTTTCTTGTCATTATAATCATTCTTTTTCAGGGTATGAAATTATTGCCAACTGGAAGAAAAAATTTCCTGTACATTACCATATATGGATCAGTGCTTGGAGCTGGGTCAATCCTTTTGCACCAATTCTCTATGATCGTAAATTCAATTCTTCAGAGTCTTGGGATGAGTGAAGAGATGCACAATCCGGTTGCTCTTTCTGTACTACTGGGTATCATCTTGGCTGGAGCTGCTTTAGGCTACTGGATTGTCAGGAGATTTGTTATTTCAAAAGAAGATGGCAGTGTAGATGCCGGGGTTGCTCAGTTTGTGAAATGGGCAATGCGCGTTATTGGAACTACTTTTGTTTTGCAGAGCACTCTTGATAATACTCTTGCAGTTGGAGCCTTGGTCTTTTGTGGAGCTGTTTGCAAGCTTATTTCTTCAATACAATTGCTTCATGAATGGTATGAAACTTCAGAGAATGATGATTATTCACTAGAATGGGTGAGAGGAACCCGTGGTCGGGCGGAATTCCTTAGCAAGTCACCTCCTAAAGGAAAAATGTGGAATAGCCCTAAAAGTGGCTCTAAAGCAACAATGTGGAACAACCCTAAAAGGACGTCATGGTCTGACTCTCCTGTGAGAGGTGTTGTATCACCATCTTCTGGGTTTTCGCCACAAACTTCTGGGACTCAATTAGGGGAAAATTATTATTCAACATTCCACAAGACCGGCAACAGAAAGAAGTTCACAAAGGAAGAATGGGATGACTTCACGAGAGACTCCACAAAGCAAGCTTTAGCTGAATGGGCAGCATCTCCAGAATTCACTGACTGGATCGTTGACCATGCAGATCGGATAAAACTGCTTCCGAGCGAGAGTTCGGACGAGACAATGGAGAGTGAATCGGATTCCACAGAGGCAGGAAGTGGAAATGGATTTTGGCTTTTTAATTGGTAG

Protein sequence

>Msa1118450

MRWSKTKKSNSMGRSAISKFKGCFSLNLNLVLFLFFLSFTSSLANNDQSSPITLKGVDIESPTLGVSPSLLLGQSDTQGAKNIMRCERVQVSGISRLKLGSYANSLHVTLAPSVAIPERLHNKIKVCFHRNNTLGWCQCEKDDWRGVQKGIWSAVMSPYETRYVDVKIDCEIPGSVTVALKEDFQQLRLISLAVGLILLLLAPIVSSWVPFYYSSSMAIGIFLVIIIILFQGMKLLPTGRKNFLYITIYGSVLGAGSILLHQFSMIVNSILQSLGMSEEMHNPVALSVLLGIILAGAALGYWIVRRFVISKEDGSVDAGVAQFVKWAMRVIGTTFVLQSTLDNTLAVGALVFCGAVCKLISSIQLLHEWYETSENDDYSLEWVRGTRGRAEFLSKSPPKGKMWNSPKSGSKATMWNNPKRTSWSDSPVRGVVSPSSGFSPQTSGTQLGENYYSTFHKTGNRKKFTKEEWDDFTRDSTKQALAEWAASPEFTDWIVDHADRIKLLPSESSDETMESESDSTEAGSGNGFWLFNW*