AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0274970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 262 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTACTTCCAAGGTTAATT+TGG 0.111458 2_3:+6824103 Msa0274970:three_prime_UTR
CCGTTAGGTTTGAATATTTC+AGG 0.147372 2_3:+6822686 Msa0274970:three_prime_UTR
AGATTAAAACTAGCACTATT+TGG 0.183352 2_3:+6825049 Msa0274970:three_prime_UTR
TCAAGAATTGGGATATTAAA+TGG 0.205351 2_3:+6823757 Msa0274970:three_prime_UTR
ATCCACGGAAGGGTGAAATT+TGG 0.210229 2_3:+6824561 Msa0274970:three_prime_UTR
TTAATCTGACCATAGTATTT+TGG 0.222364 2_3:-6824314 None:intergenic
TGAAATTTGGGGATTGTATA+GGG 0.227079 2_3:+6824574 Msa0274970:three_prime_UTR
CCAACTCAGCAGGGGCTTAA+TGG 0.229078 2_3:+6822625 Msa0274970:three_prime_UTR
TCCCATCTAATAACTTTCTT+AGG 0.239915 2_3:-6824401 None:intergenic
GATCAGAATGGTTTGGCTTC+TGG 0.249018 2_3:+6823198 Msa0274970:three_prime_UTR
CTTATGATGATACTCTTTCT+TGG 0.250770 2_3:-6822899 None:intergenic
AAAGAGGAATGTTTCGCTTC+TGG 0.254433 2_3:+6823441 Msa0274970:three_prime_UTR
GCAGAAATCTGAGAGGCTTC+TGG 0.266113 2_3:+6824837 Msa0274970:three_prime_UTR
AGCAATATCCTTGGCCCTTA+AGG 0.267509 2_3:-6822104 None:intergenic
TCCACGGAAGGGTGAAATTT+GGG 0.269923 2_3:+6824562 Msa0274970:three_prime_UTR
GAACTTGAACACTGCTTGTT+TGG 0.281217 2_3:+6820072 Msa0274970:CDS
GATTACTCTTCCTGATGATT+TGG 0.287879 2_3:+6824067 Msa0274970:three_prime_UTR
GTGAAATTTGGGGATTGTAT+AGG 0.292252 2_3:+6824573 Msa0274970:three_prime_UTR
ATTATCTCAGCAAGGAATAA+TGG 0.293308 2_3:+6824888 Msa0274970:three_prime_UTR
CATCCACTCCAAACCCTTCC+AGG 0.296798 2_3:+6819747 Msa0274970:CDS
ATTATTCCTTGCTGAGATAA+TGG 0.300567 2_3:-6824886 None:intergenic
GATTCGGAGTATTGTTCTTC+TGG 0.300900 2_3:-6822822 None:intergenic
CTGCGCTCCTCTTCGTCATC+TGG 0.301755 2_3:-6823576 None:intergenic
AATTCAACTCGGCAAGCTTT+TGG 0.307178 2_3:+6822799 Msa0274970:three_prime_UTR
GGAAGCTCAAAGAGTTCTTT+TGG 0.311227 2_3:+6822423 Msa0274970:three_prime_UTR
AGTTTGAGGCGGGCCAGATT+TGG 0.314911 2_3:+6824264 Msa0274970:three_prime_UTR
AAATATAGATGTGAAAATTA+AGG 0.320750 2_3:+6823284 Msa0274970:three_prime_UTR
TAATTTATCTTACTGATTGC+TGG 0.321072 2_3:+6824375 Msa0274970:three_prime_UTR
GTTTCGCTTCTGGGCAGATA+TGG 0.321667 2_3:+6823451 Msa0274970:three_prime_UTR
TTGGGATATTAAATGGTATA+TGG 0.323572 2_3:+6823764 Msa0274970:three_prime_UTR
GGATATTGCTGAAAAGAAAA+TGG 0.333749 2_3:+6822117 Msa0274970:three_prime_UTR
GAATGGTTTGGCTTCTGGTC+TGG 0.339378 2_3:+6823203 Msa0274970:three_prime_UTR
TACCTAAGAAAGTTATTAGA+TGG 0.342918 2_3:+6824399 Msa0274970:three_prime_UTR
AAGAGGAATGTTTCGCTTCT+GGG 0.343632 2_3:+6823442 Msa0274970:three_prime_UTR
ATCTGAATGATTTGTTGATT+TGG 0.354595 2_3:-6823370 None:intergenic
ACCAACACAACCTCTTTAAC+AGG 0.355928 2_3:-6825137 None:intergenic
CAGAATGATAGTGGCAATAT+AGG 0.356181 2_3:+6819610 Msa0274970:CDS
TTGATCAAAGCATAGAATCT+AGG 0.361416 2_3:-6823501 None:intergenic
CTCTGCTGAGCAGAAATTAC+TGG 0.362025 2_3:+6822246 Msa0274970:three_prime_UTR
ACAGTCCTCGCATTCAGATT+TGG 0.362364 2_3:-6821977 None:intergenic
GAAGCTGCATTTAAGCTGAT+TGG 0.364130 2_3:+6822400 Msa0274970:three_prime_UTR
ATCTCATCAGAAGTATGATT+TGG 0.365143 2_3:+6823794 Msa0274970:three_prime_UTR
TTGTTATTAGTAGTACTCTT+AGG 0.365249 2_3:-6819643 None:intergenic
TTCCTCTTTCTCTTTCCATC+TGG 0.368177 2_3:-6822952 None:intergenic
AGGATTTATGTTTGGGAAAA+CGG 0.372107 2_3:-6822575 None:intergenic
GTCACTTCCATTCTCCTTGT+AGG 0.372842 2_3:-6823124 None:intergenic
CTCACGGAAACCTTCAAAAC+AGG 0.373315 2_3:+6823155 Msa0274970:three_prime_UTR
GTTTGAGGCGGGCCAGATTT+GGG 0.373748 2_3:+6824265 Msa0274970:three_prime_UTR
AATAGATGGCATGGCAGGTT+TGG 0.375145 2_3:-6822497 None:intergenic
TGCTGTCATAACTCATAATC+AGG 0.376227 2_3:+6822040 Msa0274970:three_prime_UTR
AGAGGAGCGCAGGTGGGTTA+AGG 0.376360 2_3:+6823587 Msa0274970:three_prime_UTR
GAACATTGGTTGATCTTTAG+TGG 0.377445 2_3:-6823658 None:intergenic
TCTTCCATCGGCAAGGATAT+AGG 0.378977 2_3:-6824044 None:intergenic
GATTAAAACTAGCACTATTT+GGG 0.379481 2_3:+6825050 Msa0274970:three_prime_UTR
AAGCTGCATTTAAGCTGATT+GGG 0.381476 2_3:+6822401 Msa0274970:three_prime_UTR
TGAACGAACCTGGAAGGGTT+TGG 0.382004 2_3:-6819755 None:intergenic
CCATTAAGCCCCTGCTGAGT+TGG 0.382613 2_3:-6822625 None:intergenic
GTCTAAGAAGCCAACTCAGC+AGG 0.385465 2_3:+6822615 Msa0274970:three_prime_UTR
CACCATAAAATGCCCAAATC+TGG 0.388005 2_3:-6824277 None:intergenic
GCAATAAAGAAGAGGCCTTA+AGG 0.393138 2_3:+6822089 Msa0274970:three_prime_UTR
TGCCGAGTTGAATTAGTTGC+CGG 0.394141 2_3:-6822790 None:intergenic
TCCTCTTCGTCATCTGGATC+TGG 0.395746 2_3:-6823570 None:intergenic
CAGAAATCTGAGAGGCTTCT+GGG 0.401330 2_3:+6824838 Msa0274970:three_prime_UTR
GACGAACTTCCAAAATACTA+TGG 0.401455 2_3:+6824305 Msa0274970:three_prime_UTR
GGATTTATGTTTGGGAAAAC+GGG 0.403433 2_3:-6822574 None:intergenic
TGTTGAGGAGGATTTATGTT+TGG 0.407863 2_3:-6822583 None:intergenic
TCAGAAACTATATCCTGATT+TGG 0.408301 2_3:+6822183 Msa0274970:three_prime_UTR
CATAACTCATAATCAGGCTT+TGG 0.409499 2_3:+6822046 Msa0274970:three_prime_UTR
AGAAAGAAAACGTGCTTGTA+AGG 0.409928 2_3:-6819705 None:intergenic
CAATAAAGAAGAGGCCTTAA+GGG 0.410268 2_3:+6822090 Msa0274970:three_prime_UTR
TATAGACTCGGAACTTTCAC+TGG 0.413142 2_3:-6822989 None:intergenic
AGGGAGCAGCATTTGCTAAC+CGG 0.415051 2_3:+6824972 Msa0274970:three_prime_UTR
TGAGCGATATTCTCCAAATC+AGG 0.418029 2_3:-6822196 None:intergenic
TGTTAGAGCTCCATCAGTTT+CGG 0.419365 2_3:+6824175 Msa0274970:three_prime_UTR
GGCTCGTACATTTGCACATA+AGG 0.419479 2_3:+6822159 Msa0274970:three_prime_UTR
TTATCTCAGCAAGGAATAAT+GGG 0.423675 2_3:+6824889 Msa0274970:three_prime_UTR
GGAGGGGACTTATGCATTGT+TGG 0.425957 2_3:+6822007 Msa0274970:three_prime_UTR
GATTTAAGTTGCAGATAACT+TGG 0.429434 2_3:+6823541 Msa0274970:three_prime_UTR
GTAAGTTGTACAGAAATTGC+AGG 0.429808 2_3:+6821950 Msa0274970:intron
GCAAGGAATAATGGGTAAGT+TGG 0.433726 2_3:+6824897 Msa0274970:three_prime_UTR
TTCAGCATCAAATTGATTGA+AGG 0.433817 2_3:-6824228 None:intergenic
TTTAAAGTGTATCCTAGAAA+AGG 0.438839 2_3:+6823717 Msa0274970:three_prime_UTR
GGGAGTATTTGTTTCATACT+TGG 0.438908 2_3:+6823854 Msa0274970:three_prime_UTR
TTGAAAATGCAGAATGATAG+TGG 0.440619 2_3:+6819601 None:intergenic
ATTAAATGCGTTCGGAGGAT+TGG 0.441380 2_3:+6824332 Msa0274970:three_prime_UTR
CGGACATTAGTTTGCATCAC+AGG 0.441445 2_3:-6822550 None:intergenic
GTTGAGGAGGATTTATGTTT+GGG 0.442059 2_3:-6822582 None:intergenic
AGTTGTTCAGATTCTCTCAC+AGG 0.449518 2_3:+6823955 Msa0274970:three_prime_UTR
TCGAGTTCAAAGGCTCCTAC+AGG 0.450890 2_3:-6824020 None:intergenic
AATTTATCTTACTGATTGCT+GGG 0.453279 2_3:+6824376 Msa0274970:three_prime_UTR
CATTCTCCTTGTAGGAAACC+TGG 0.454097 2_3:-6823116 None:intergenic
TTTCGCTTCTGGGCAGATAT+GGG 0.454800 2_3:+6823452 Msa0274970:three_prime_UTR
TCCTTCAGTTCCAAATCATC+AGG 0.456260 2_3:-6824077 None:intergenic
GTTCTACCTGCCTGTTAAAG+AGG 0.456691 2_3:+6825127 Msa0274970:three_prime_UTR
CACCAATTCTGTTTCACATC+AGG 0.457196 2_3:+6824496 Msa0274970:three_prime_UTR
CAAATGAACTGTAATTATGC+AGG 0.458818 2_3:-6825086 None:intergenic
TCCTGATGATTTGGAACTGA+AGG 0.462015 2_3:+6824076 Msa0274970:three_prime_UTR
TAGTGCTAAACTGTTTAGCC+AGG 0.464920 2_3:+6824952 Msa0274970:three_prime_UTR
AATGAATGATCAGAATGGTT+TGG 0.466017 2_3:+6823191 Msa0274970:three_prime_UTR
TTAGACTGCTGTTGCTGTTG+AGG 0.468443 2_3:-6822598 None:intergenic
ATCCTAGAAAAGGAGAAACT+TGG 0.468645 2_3:+6823727 Msa0274970:three_prime_UTR
AATTGATTGAAGGAAGGGTC+TGG 0.472960 2_3:-6824218 None:intergenic
TTTGGGGATTGTATAGGGGA+TGG 0.477728 2_3:+6824579 Msa0274970:three_prime_UTR
TCCGAATCACGGTGCTCCTA+AGG 0.479436 2_3:+6822837 Msa0274970:three_prime_UTR
GTTTCTTAATTATTCCATCA+TGG 0.479714 2_3:-6822321 None:intergenic
ACCTTAGGAGCACCGTGATT+CGG 0.481672 2_3:-6822838 None:intergenic
CAAGGAATAATGGGTAAGTT+GGG 0.485033 2_3:+6824898 Msa0274970:three_prime_UTR
ATGGTCAGATTAAATGCGTT+CGG 0.485378 2_3:+6824324 Msa0274970:three_prime_UTR
AGTTATTAGATGGGAAGATA+AGG 0.488752 2_3:+6824409 Msa0274970:three_prime_UTR
AGATGTGAAAATTAAGGAGG+TGG 0.492209 2_3:+6823290 Msa0274970:three_prime_UTR
AGTGAAAGTTCCGAGTCTAT+AGG 0.493626 2_3:+6822991 Msa0274970:three_prime_UTR
AAAGAGTATCATCATAAGAA+AGG 0.494543 2_3:+6822904 Msa0274970:three_prime_UTR
GATGAGAGAAGAATCGAAGA+AGG 0.494568 2_3:-6819728 None:intergenic
TCATCGTATACTTTATGAAA+AGG 0.495949 2_3:+6823683 Msa0274970:three_prime_UTR
AACAGAATTGGTGTTGTTGT+AGG 0.497331 2_3:-6824486 None:intergenic
GCCTGTTAAAGAGGTTGTGT+TGG 0.500583 2_3:+6825136 Msa0274970:three_prime_UTR
CTTCCGTCAGTTTGAAAGCA+GGG 0.503543 2_3:-6824808 None:intergenic
GTTATCTGCAACTTAAATCC+AGG 0.504899 2_3:-6823537 None:intergenic
CTTTGGAATTTAGACTTCGA+TGG 0.506540 2_3:+6822063 Msa0274970:three_prime_UTR
CACCTGATGTGAAACAGAAT+TGG 0.506845 2_3:-6824498 None:intergenic
AACGGGCAGCTCAAAGATAG+AGG 0.509577 2_3:+6823326 Msa0274970:three_prime_UTR
ACCCACCTCATATGCAATGA+AGG 0.510885 2_3:-6822752 None:intergenic
TCATACTTGGCTAAGTTGAA+AGG 0.511550 2_3:+6823867 Msa0274970:three_prime_UTR
AAGCAACTCAGTAGAGGAGA+AGG 0.512454 2_3:+6824130 Msa0274970:three_prime_UTR
CGTTAGGTTTGAATATTTCA+GGG 0.514181 2_3:+6822687 Msa0274970:three_prime_UTR
AGCCAGATGGAAAGAGAAAG+AGG 0.514187 2_3:+6822950 Msa0274970:three_prime_UTR
TTCAAGGGTAAATTAAGTAA+CGG 0.514783 2_3:+6824725 Msa0274970:three_prime_UTR
AAGTCATTGAACTCTGGATC+GGG 0.516861 2_3:-6823405 None:intergenic
TCTCGAATTACGAAGGGAGG+TGG 0.517185 2_3:+6823906 Msa0274970:three_prime_UTR
GACTGCTGTTGCTGTTGAGG+AGG 0.518186 2_3:-6822595 None:intergenic
AGGCTTCTGGGAACTTGATC+CGG 0.521662 2_3:+6824850 Msa0274970:three_prime_UTR
TGATATTTCCCACAAGCACT+TGG 0.523248 2_3:-6823618 None:intergenic
TAAGCCCTTCATTGCATATG+AGG 0.523474 2_3:+6822747 Msa0274970:three_prime_UTR
GAGAAACTGCCAAGTGCTTG+TGG 0.524452 2_3:+6823609 Msa0274970:three_prime_UTR
TTATTTCTGGAGAAGGTAAG+TGG 0.525653 2_3:+6824689 Msa0274970:three_prime_UTR
GTGGGAGGAAAAGAAACAAC+GGG 0.525910 2_3:+6823309 Msa0274970:three_prime_UTR
GGGTCCACAGAGTACAAAAC+CGG 0.526787 2_3:+6822771 Msa0274970:three_prime_UTR
TCGGATTATGTTGAAGGCGC+GGG 0.527387 2_3:+6823834 Msa0274970:three_prime_UTR
TGAGATCCAACACCAACCTT+AGG 0.527546 2_3:-6822853 None:intergenic
CAGGTTTCCTACAAGGAGAA+TGG 0.529926 2_3:+6823117 Msa0274970:three_prime_UTR
TCTCTAGAAGTAGAAACGCC+AGG 0.530087 2_3:-6823060 None:intergenic
TCAATCAATTTGATGCTGAA+AGG 0.532462 2_3:+6824231 Msa0274970:three_prime_UTR
ATCACAGGATTAAAGTTCAC+CGG 0.534280 2_3:-6822535 None:intergenic
CCACGGAAGGGTGAAATTTG+GGG 0.534533 2_3:+6824563 Msa0274970:three_prime_UTR
AAGGTTGGTGTTGGATCTCA+AGG 0.536385 2_3:+6822856 Msa0274970:three_prime_UTR
GGTGCTCCTAAGGTTGGTGT+TGG 0.537663 2_3:+6822847 Msa0274970:three_prime_UTR
GCTTCTTTCCAAATTAACCT+TGG 0.537905 2_3:-6824111 None:intergenic
TCTTCCGTCAGTTTGAAAGC+AGG 0.538427 2_3:-6824809 None:intergenic
TTGTCAAAGTCATTGAACTC+TGG 0.538570 2_3:-6823411 None:intergenic
TCCTAGAAAAGGAGAAACTT+GGG 0.540925 2_3:+6823728 Msa0274970:three_prime_UTR
ATGGAGAGCAAAGATTTCAC+AGG 0.541304 2_3:+6822136 Msa0274970:three_prime_UTR
GATGTGAAAATTAAGGAGGT+GGG 0.541319 2_3:+6823291 Msa0274970:three_prime_UTR
AGATTTGAACGAACCTGGAA+GGG 0.542798 2_3:-6819760 None:intergenic
TCCCATGAAAAGTTTGAGGC+GGG 0.542823 2_3:+6824254 Msa0274970:three_prime_UTR
GAAATTTGGGGATTGTATAG+GGG 0.543940 2_3:+6824575 Msa0274970:three_prime_UTR
GCATCAAATTGATTGAAGGA+AGG 0.544407 2_3:-6824224 None:intergenic
GAGATTTGAACGAACCTGGA+AGG 0.546742 2_3:-6819761 None:intergenic
CATCAAATTGATTGAAGGAA+GGG 0.546925 2_3:-6824223 None:intergenic
AAATGAACTGTAATTATGCA+GGG 0.547127 2_3:-6825085 None:intergenic
CTGTGATGCAAACTAATGTC+CGG 0.547207 2_3:+6822551 Msa0274970:three_prime_UTR
TAATGGTGTGGTACTGCTGC+CGG 0.550049 2_3:-6824869 None:intergenic
AAAGTCATTGAACTCTGGAT+CGG 0.550894 2_3:-6823406 None:intergenic
TGGTGGATTTGTATAGAAGA+AGG 0.553468 2_3:+6820100 Msa0274970:CDS
CGATCCTATATCCTTGCCGA+TGG 0.555561 2_3:+6824040 Msa0274970:three_prime_UTR
CAGCAGGGGCTTAATGGCAG+TGG 0.555761 2_3:+6822631 Msa0274970:three_prime_UTR
ACCTAAGAAAGTTATTAGAT+GGG 0.557163 2_3:+6824400 Msa0274970:three_prime_UTR
CTTTGACAAGGACAAGAAAG+AGG 0.557198 2_3:+6823425 Msa0274970:three_prime_UTR
GGTTAGCAAATGCTGCTCCC+TGG 0.559020 2_3:-6824970 None:intergenic
TCTAAGAAGCCAACTCAGCA+GGG 0.559454 2_3:+6822616 Msa0274970:three_prime_UTR
ATTGATCGCAATGACCATGA+TGG 0.559804 2_3:+6822307 Msa0274970:three_prime_UTR
AAAACACCAGGTTTCCTACA+AGG 0.560797 2_3:+6823110 Msa0274970:three_prime_UTR
GCCCTTCATTGCATATGAGG+TGG 0.561607 2_3:+6822750 Msa0274970:three_prime_UTR
GAGAATCTGAACAACTCAGC+TGG 0.561764 2_3:-6823948 None:intergenic
AGAAACTGCCAAGTGCTTGT+GGG 0.563507 2_3:+6823610 Msa0274970:three_prime_UTR
AATGTCTCTGTAAAGCCAGA+TGG 0.563630 2_3:+6822937 Msa0274970:three_prime_UTR
AAAGATAGAGGAAGCTTCAG+AGG 0.566259 2_3:+6823338 Msa0274970:three_prime_UTR
CCCCAAATTTCACCCTTCCG+TGG 0.567235 2_3:-6824563 None:intergenic
GATTCTGCAACCGAAACTGA+TGG 0.568717 2_3:-6824185 None:intergenic
AGTTGCTCAGATTCTCTCAC+AGG 0.572226 2_3:+6824783 Msa0274970:three_prime_UTR
GTCGGATTATGTTGAAGGCG+CGG 0.572346 2_3:+6823833 Msa0274970:three_prime_UTR
ATATGAAATTTATCCACGGA+AGG 0.572612 2_3:+6824550 Msa0274970:three_prime_UTR
CCTTCGTAATTCGAGAGAAG+AGG 0.575376 2_3:-6823899 None:intergenic
AGCGTCCACGTAGATCTTCA+CGG 0.576823 2_3:+6823085 Msa0274970:three_prime_UTR
GTTGTTCAGATTCTCTCACA+GGG 0.577108 2_3:+6823956 Msa0274970:three_prime_UTR
ATGACGAAGAGGAGCGCAGG+TGG 0.577366 2_3:+6823580 Msa0274970:three_prime_UTR
CCCTTCATTGCATATGAGGT+GGG 0.577708 2_3:+6822751 Msa0274970:three_prime_UTR
CCTGAAATATTCAAACCTAA+CGG 0.578272 2_3:-6822686 None:intergenic
AGTGCTAAACTGTTTAGCCA+GGG 0.584913 2_3:+6824953 Msa0274970:three_prime_UTR
CAGATGACGAAGAGGAGCGC+AGG 0.586014 2_3:+6823577 Msa0274970:three_prime_UTR
ACACAACCTCTTTAACAGGC+AGG 0.587781 2_3:-6825133 None:intergenic
ACTGAAATGAATGATCAGAA+TGG 0.588501 2_3:+6823186 Msa0274970:three_prime_UTR
TTATGTTTGGGAAAACGGGC+CGG 0.588548 2_3:-6822570 None:intergenic
GCCAGATCCAGATGACGAAG+AGG 0.590540 2_3:+6823569 Msa0274970:three_prime_UTR
GGATATAGGATCGAGTTCAA+AGG 0.591968 2_3:-6824030 None:intergenic
ATCAGTGCTGCCTATAGACT+CGG 0.593654 2_3:-6823001 None:intergenic
AGAAAACGTGCTTGTAAGGG+TGG 0.594734 2_3:-6819701 None:intergenic
TTACTGAAGATGCTGATATG+TGG 0.595321 2_3:+6824657 Msa0274970:three_prime_UTR
AGAAGAGGCCTTAAGGGCCA+AGG 0.596768 2_3:+6822096 Msa0274970:three_prime_UTR
CTCTTCTCTCGAATTACGAA+GGG 0.597804 2_3:+6823900 Msa0274970:three_prime_UTR
GAAACCTTCAAAACAGGGAA+AGG 0.598081 2_3:+6823161 Msa0274970:three_prime_UTR
GGAAAGAAGCAACTCAGTAG+AGG 0.598293 2_3:+6824124 Msa0274970:three_prime_UTR
ATGACTGGTCTGGAAAGAGC+AGG 0.598484 2_3:+6823993 Msa0274970:three_prime_UTR
TATAGATGTGAAAATTAAGG+AGG 0.599093 2_3:+6823287 Msa0274970:three_prime_UTR
AGCTGCATTTAAGCTGATTG+GGG 0.602250 2_3:+6822402 Msa0274970:three_prime_UTR
GAAAGAGCAGGCGTCCCTGT+AGG 0.602401 2_3:+6824005 Msa0274970:three_prime_UTR
TTCTCTCGAATTACGAAGGG+AGG 0.602519 2_3:+6823903 Msa0274970:three_prime_UTR
GAAGGATACATCTACTTCCA+AGG 0.604395 2_3:+6824094 Msa0274970:three_prime_UTR
AATCACGGTGCTCCTAAGGT+TGG 0.605145 2_3:+6822841 Msa0274970:three_prime_UTR
TCTGGAAGATGATCAGAAAG+AGG 0.605661 2_3:+6823221 Msa0274970:three_prime_UTR
GTCCCATGAAAAGTTTGAGG+CGG 0.608243 2_3:+6824253 Msa0274970:three_prime_UTR
GTGAGAGAATCTGAGCAACT+CGG 0.610716 2_3:-6824780 None:intergenic
GTAATACTAATGTGGTGGAC+TGG 0.611478 2_3:+6822269 Msa0274970:three_prime_UTR
CCCACCTCATATGCAATGAA+GGG 0.613211 2_3:-6822751 None:intergenic
CTCGAATTACGAAGGGAGGT+GGG 0.613918 2_3:+6823907 Msa0274970:three_prime_UTR
AGGAATATGAAATTTATCCA+CGG 0.614576 2_3:+6824546 Msa0274970:three_prime_UTR
GAAAGAAAACGTGCTTGTAA+GGG 0.614683 2_3:-6819704 None:intergenic
CTCGGTCCTATCGATAGTCA+TGG 0.615174 2_3:-6824762 None:intergenic
AAGGTCCCATGAAAAGTTTG+AGG 0.615424 2_3:+6824250 Msa0274970:three_prime_UTR
TCTGCTGAGCAGAAATTACT+GGG 0.615704 2_3:+6822247 Msa0274970:three_prime_UTR
AGTAATCTCTTCCATCGGCA+AGG 0.617474 2_3:-6824051 None:intergenic
AGCACTAATACAGTGAAACA+AGG 0.618210 2_3:-6824936 None:intergenic
TAGGTGCAGAGCTTACCACT+TGG 0.618861 2_3:-6824467 None:intergenic
GCTGTCCAAATCTGAATGCG+AGG 0.621383 2_3:+6821972 Msa0274970:three_prime_UTR
AATCTGAACAACTCAGCTGG+TGG 0.622075 2_3:-6823945 None:intergenic
GAAGTGACGACGATGACTCA+CGG 0.623679 2_3:+6823139 Msa0274970:three_prime_UTR
AAACTGTGAGTATGACATAG+TGG 0.623986 2_3:+6824631 Msa0274970:three_prime_UTR
TGGAGAGCAAAGATTTCACA+GGG 0.624124 2_3:+6822137 Msa0274970:three_prime_UTR
GCTTGTGGGAAATATCAACT+TGG 0.624831 2_3:+6823624 Msa0274970:three_prime_UTR
CCTCTTCTCTCGAATTACGA+AGG 0.625976 2_3:+6823899 Msa0274970:three_prime_UTR
ATTACTGGGTAATACTAATG+TGG 0.626275 2_3:+6822261 Msa0274970:three_prime_UTR
GTCAGATTAAATGCGTTCGG+AGG 0.627109 2_3:+6824327 Msa0274970:three_prime_UTR
TTCAAACTGACGGAAGAACA+TGG 0.627670 2_3:+6824815 Msa0274970:three_prime_UTR
AGATGACCATGACTATCGAT+AGG 0.630507 2_3:+6824756 Msa0274970:three_prime_UTR
AAGAACAATACTCCGAATCA+CGG 0.631389 2_3:+6822826 Msa0274970:three_prime_UTR
GATGGATTGCAATAAAGAAG+AGG 0.636257 2_3:+6822081 Msa0274970:three_prime_UTR
ACTGGGTAATACTAATGTGG+TGG 0.636662 2_3:+6822264 Msa0274970:three_prime_UTR
GTGAAAATTAAGGAGGTGGG+AGG 0.637325 2_3:+6823294 Msa0274970:three_prime_UTR
TATGAAATTTATCCACGGAA+GGG 0.639556 2_3:+6824551 Msa0274970:three_prime_UTR
CGAGTTCAAAGGCTCCTACA+GGG 0.645467 2_3:-6824019 None:intergenic
GATCCCTGCTTTCAAACTGA+CGG 0.646604 2_3:+6824805 Msa0274970:three_prime_UTR
ACCACACCATTATCTCAGCA+AGG 0.646629 2_3:+6824880 Msa0274970:three_prime_UTR
AGTATACGATGAGAGAACAT+TGG 0.647284 2_3:-6823672 None:intergenic
CTAAGAAGCCAACTCAGCAG+GGG 0.647584 2_3:+6822617 Msa0274970:three_prime_UTR
GGAAGAGTAATCTCTTCCAT+CGG 0.651816 2_3:-6824056 None:intergenic
AACCGGCAACTAATTCAACT+CGG 0.654528 2_3:+6822788 Msa0274970:three_prime_UTR
AAGGGTAAATTAAGTAACGG+AGG 0.655997 2_3:+6824728 Msa0274970:three_prime_UTR
GCTGTTTATGATGATACAGA+TGG 0.656316 2_3:+6823474 Msa0274970:three_prime_UTR
TGACGAAGAGGAGCGCAGGT+GGG 0.660160 2_3:+6823581 Msa0274970:three_prime_UTR
TAGTGCTGTTCGAAACAACA+AGG 0.661852 2_3:+6824526 Msa0274970:three_prime_UTR
GAACCTGGAAGGGTTTGGAG+TGG 0.664704 2_3:-6819750 None:intergenic
AAGGATATGATCATTTCCTG+TGG 0.671661 2_3:+6824428 Msa0274970:three_prime_UTR
GCAGGTAGAACAACAAACAC+AGG 0.673725 2_3:-6825115 None:intergenic
GGTGGGAGGAAAAGAAACAA+CGG 0.678584 2_3:+6823308 Msa0274970:three_prime_UTR
AGAGTTCAATGACTTTGACA+AGG 0.684191 2_3:+6823413 Msa0274970:three_prime_UTR
TCACGGAAACCTTCAAAACA+GGG 0.685759 2_3:+6823156 Msa0274970:three_prime_UTR
AATGAACTGTAATTATGCAG+GGG 0.687472 2_3:-6825084 None:intergenic
GATACACTTTAAAAGTAGAG+CGG 0.692073 2_3:-6823707 None:intergenic
AAGGTGATTTGTATGCTAAG+AGG 0.700453 2_3:+6822875 Msa0274970:three_prime_UTR
AGATTTAAAATCAATCCAAG+TGG 0.713999 2_3:+6824452 Msa0274970:three_prime_UTR
TCCTTGCTGAGATAATGGTG+TGG 0.715462 2_3:-6824881 None:intergenic
GAACATGGCAGAAATCTGAG+AGG 0.745585 2_3:+6824830 Msa0274970:three_prime_UTR
GGAGAGCAAAGATTTCACAG+GGG 0.834919 2_3:+6822138 Msa0274970:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAAAAAAAAAAAAACTTTT+AGG - chr2_3:6825013-6825032 None:intergenic 10.0%
!! ATTTGTAAGATACAAATTAT+AGG - chr2_3:6819869-6819888 None:intergenic 15.0%
!! TGTTAATTTCAGAATAAATT+AGG + chr2_3:6820007-6820026 Msa0274970:intron 15.0%
!! GTTAATTTCAGAATAAATTA+GGG + chr2_3:6820008-6820027 Msa0274970:intron 15.0%
!!! TTTAACTGTTAAGAATTTTT+AGG + chr2_3:6820223-6820242 Msa0274970:intron 15.0%
!!! TTTAACTGTTAAGAATTTTT+AGG + chr2_3:6820223-6820242 Msa0274970:intron 15.0%
!! ATTTAATTCCTCAATTAAAA+AGG + chr2_3:6820667-6820686 Msa0274970:intron 15.0%
!! CTTGTTTATAAAATCTAAAT+TGG + chr2_3:6820913-6820932 Msa0274970:intron 15.0%
!!! AGAAAGATTAAAATTTTAGT+GGG + chr2_3:6821219-6821238 Msa0274970:intron 15.0%
!!! AATTTATTTCTTATTTGTGT+GGG - chr2_3:6821598-6821617 None:intergenic 15.0%
!!! AAATTTATTTCTTATTTGTG+TGG - chr2_3:6821599-6821618 None:intergenic 15.0%
!!! TTTTATATCTTATAAAAGGT+AGG - chr2_3:6821710-6821729 None:intergenic 15.0%
!! AAACATAAAGTTTATGAATA+AGG - chr2_3:6821859-6821878 None:intergenic 15.0%
!! AAATATAGATGTGAAAATTA+AGG + chr2_3:6823284-6823303 Msa0274970:three_prime_UTR 15.0%
!! AGTAAGAGTGAAAAATTAAA+CGG - chr2_3:6819816-6819835 None:intergenic 20.0%
!!! TAAAGGTAGTTTTTTTTGTA+TGG + chr2_3:6819948-6819967 Msa0274970:intron 20.0%
!!! AAAGGTAGTTTTTTTTGTAT+GGG + chr2_3:6819949-6819968 Msa0274970:intron 20.0%
!!! TTCAATTTTTTCTTTCTTTC+AGG + chr2_3:6820044-6820063 Msa0274970:intron 20.0%
!!! GTTATTTTAACTTATTACTG+TGG + chr2_3:6820935-6820954 Msa0274970:intron 20.0%
!! TTTCTCAATATATACACATA+GGG - chr2_3:6821204-6821223 None:intergenic 20.0%
!!! GAGAAAGATTAAAATTTTAG+TGG + chr2_3:6821218-6821237 Msa0274970:intron 20.0%
!!! GAAAGATTAAAATTTTAGTG+GGG + chr2_3:6821220-6821239 Msa0274970:intron 20.0%
!! CTAACTAAAAAATCAAATGA+AGG - chr2_3:6821318-6821337 None:intergenic 20.0%
!!! ATTTATTTCTTATTTGTGTG+GGG - chr2_3:6821597-6821616 None:intergenic 20.0%
!! AAATAAATTTCAGTGAAAAG+AGG + chr2_3:6821609-6821628 Msa0274970:intron 20.0%
!!! AGGAAGAAAATAGTTTATTT+TGG + chr2_3:6821629-6821648 Msa0274970:intron 20.0%
!! TTGTTATTAGTAGTACTCTT+AGG - chr2_3:6819646-6819665 None:intergenic 25.0%
! GTAAGAGTGAAAAATTAAAC+GGG - chr2_3:6819815-6819834 None:intergenic 25.0%
!! TTTCACTCTTACTGAATTTT+AGG + chr2_3:6819823-6819842 Msa0274970:intron 25.0%
!! TTCACTCTTACTGAATTTTA+GGG + chr2_3:6819824-6819843 Msa0274970:intron 25.0%
!!! CGTTTTTTCTTTAGTTGTAA+AGG + chr2_3:6819931-6819950 Msa0274970:intron 25.0%
!!! TTTTTCTTTCTTTCAGGTTT+CGG + chr2_3:6820050-6820069 Msa0274970:intron 25.0%
!!! AATGAATTTTTAGACTGTGT+TGG + chr2_3:6820159-6820178 Msa0274970:intron 25.0%
! TTGTGTTTATAGATTTGTGA+TGG + chr2_3:6820186-6820205 Msa0274970:intron 25.0%
!!! AATGATTTTTTAGACTGTGT+TGG + chr2_3:6820291-6820310 Msa0274970:intron 25.0%
! TTGTGTTTATAGATTTGTGA+TGG + chr2_3:6820186-6820205 Msa0274970:intron 25.0%
!!! TGGATCAAGAAATTTTAAGT+AGG + chr2_3:6820409-6820428 Msa0274970:intron 25.0%
! ACATATCAAATGATAGTAGT+GGG - chr2_3:6821180-6821199 None:intergenic 25.0%
! TTCTCAATATATACACATAG+GGG - chr2_3:6821203-6821222 None:intergenic 25.0%
! CTTTCTCAATATATACACAT+AGG - chr2_3:6821205-6821224 None:intergenic 25.0%
!! GAAAATCAATAGAAGTGTAA+GGG - chr2_3:6821549-6821568 None:intergenic 25.0%
!! AGAAAATCAATAGAAGTGTA+AGG - chr2_3:6821550-6821569 None:intergenic 25.0%
! TCAACCAAAAATTCTCAAAA+AGG - chr2_3:6821913-6821932 None:intergenic 25.0%
! GTTTCTTAATTATTCCATCA+TGG - chr2_3:6822324-6822343 None:intergenic 25.0%
!!! ATTTCAGGGTAGTTTTAAAT+AGG + chr2_3:6822701-6822720 Msa0274970:three_prime_UTR 25.0%
!!! AAAGAGTATCATCATAAGAA+AGG + chr2_3:6822904-6822923 Msa0274970:three_prime_UTR 25.0%
! TATAGATGTGAAAATTAAGG+AGG + chr2_3:6823287-6823306 Msa0274970:three_prime_UTR 25.0%
!!! ATCTGAATGATTTGTTGATT+TGG - chr2_3:6823373-6823392 None:intergenic 25.0%
!!! ATCAAAAAAGTTTTTTCTCC+TGG + chr2_3:6823519-6823538 Msa0274970:three_prime_UTR 25.0%
! TCATCGTATACTTTATGAAA+AGG + chr2_3:6823683-6823702 Msa0274970:three_prime_UTR 25.0%
!! TTTAAAGTGTATCCTAGAAA+AGG + chr2_3:6823717-6823736 Msa0274970:three_prime_UTR 25.0%
! TCAAGAATTGGGATATTAAA+TGG + chr2_3:6823757-6823776 Msa0274970:three_prime_UTR 25.0%
! TTGGGATATTAAATGGTATA+TGG + chr2_3:6823764-6823783 Msa0274970:three_prime_UTR 25.0%
!! TTAATCTGACCATAGTATTT+TGG - chr2_3:6824317-6824336 None:intergenic 25.0%
!! TTACTTGCAACTCAATTTTT+GGG - chr2_3:6824358-6824377 None:intergenic 25.0%
!! ATTACTTGCAACTCAATTTT+TGG - chr2_3:6824359-6824378 None:intergenic 25.0%
!! TAATTTATCTTACTGATTGC+TGG + chr2_3:6824375-6824394 Msa0274970:three_prime_UTR 25.0%
!! AATTTATCTTACTGATTGCT+GGG + chr2_3:6824376-6824395 Msa0274970:three_prime_UTR 25.0%
! TACCTAAGAAAGTTATTAGA+TGG + chr2_3:6824399-6824418 Msa0274970:three_prime_UTR 25.0%
! ACCTAAGAAAGTTATTAGAT+GGG + chr2_3:6824400-6824419 Msa0274970:three_prime_UTR 25.0%
!!! ATTGATTTTAAATCTTCCAC+AGG - chr2_3:6824447-6824466 None:intergenic 25.0%
!! AGATTTAAAATCAATCCAAG+TGG + chr2_3:6824452-6824471 Msa0274970:three_prime_UTR 25.0%
! AGGAATATGAAATTTATCCA+CGG + chr2_3:6824546-6824565 Msa0274970:three_prime_UTR 25.0%
! TTCAAGGGTAAATTAAGTAA+CGG + chr2_3:6824725-6824744 Msa0274970:three_prime_UTR 25.0%
! TAGGTTCAAAAAATGAAATC+CGG - chr2_3:6824994-6825013 None:intergenic 25.0%
! AGATTAAAACTAGCACTATT+TGG + chr2_3:6825049-6825068 Msa0274970:three_prime_UTR 25.0%
! GATTAAAACTAGCACTATTT+GGG + chr2_3:6825050-6825069 Msa0274970:three_prime_UTR 25.0%
! AAATGAACTGTAATTATGCA+GGG - chr2_3:6825088-6825107 None:intergenic 25.0%
! TTATAGATTTGTGATGGTGT+AGG + chr2_3:6820192-6820211 Msa0274970:intron 30.0%
TATAGATTTGTGATGGTTGT+TGG + chr2_3:6820325-6820344 Msa0274970:intron 30.0%
TGTTGCATATATGTTGTAGT+TGG + chr2_3:6820436-6820455 Msa0274970:intron 30.0%
GTTGCATATATGTTGTAGTT+GGG + chr2_3:6820437-6820456 Msa0274970:intron 30.0%
GGGTATCAATAGTACTTATA+CGG + chr2_3:6820457-6820476 Msa0274970:intron 30.0%
GGTATCAATAGTACTTATAC+GGG + chr2_3:6820458-6820477 Msa0274970:intron 30.0%
GTATCAATAGTACTTATACG+GGG + chr2_3:6820459-6820478 Msa0274970:intron 30.0%
TTGTTCATATGTGTGCTATA+CGG + chr2_3:6820602-6820621 Msa0274970:intron 30.0%
! TGAATCTAAAACCGCATATT+TGG - chr2_3:6820781-6820800 None:intergenic 30.0%
AAAAACAGAGAGACTTTAGA+AGG + chr2_3:6820980-6820999 Msa0274970:intron 30.0%
ATAGTAATCATGCAAAAGAG+AGG + chr2_3:6821050-6821069 Msa0274970:intron 30.0%
TAGTAATCATGCAAAAGAGA+GGG + chr2_3:6821051-6821070 Msa0274970:intron 30.0%
GACATATCAAATGATAGTAG+TGG - chr2_3:6821181-6821200 None:intergenic 30.0%
! AAAGTTTTGCCATAGAAAGT+GGG + chr2_3:6821338-6821357 Msa0274970:intron 30.0%
ATCGAAATACTTTGCTCAAT+AGG - chr2_3:6821453-6821472 None:intergenic 30.0%
TTTCAGATTATCAAACCTCT+AGG + chr2_3:6821476-6821495 Msa0274970:intron 30.0%
TTCAGATTATCAAACCTCTA+GGG + chr2_3:6821477-6821496 Msa0274970:intron 30.0%
TCTGTACTTTGTATCTTTGT+TGG + chr2_3:6821567-6821586 Msa0274970:intron 30.0%
TACTTTGTATCTTTGTTGGT+TGG + chr2_3:6821571-6821590 Msa0274970:intron 30.0%
TGAATTCATCAAACACAACA+AGG - chr2_3:6821682-6821701 None:intergenic 30.0%
! TTGTTGTGGATTTTCTGTTT+TGG + chr2_3:6821783-6821802 Msa0274970:intron 30.0%
CCAAAAATTCTCAAAAAGGA+TGG - chr2_3:6821909-6821928 None:intergenic 30.0%
!! CCATCCTTTTTGAGAATTTT+TGG + chr2_3:6821906-6821925 Msa0274970:intron 30.0%
!!! TTGAGAATTTTTGGTTGATG+TGG + chr2_3:6821915-6821934 Msa0274970:intron 30.0%
!!! TGAGAATTTTTGGTTGATGT+GGG + chr2_3:6821916-6821935 Msa0274970:intron 30.0%
! TTTCTTTTCAGCAATATCCT+TGG - chr2_3:6822116-6822135 None:intergenic 30.0%
GGATATTGCTGAAAAGAAAA+TGG + chr2_3:6822117-6822136 Msa0274970:three_prime_UTR 30.0%
TCAGAAACTATATCCTGATT+TGG + chr2_3:6822183-6822202 Msa0274970:three_prime_UTR 30.0%
ATTACTGGGTAATACTAATG+TGG + chr2_3:6822261-6822280 Msa0274970:three_prime_UTR 30.0%
AGGATTTATGTTTGGGAAAA+CGG - chr2_3:6822578-6822597 None:intergenic 30.0%
CCTGAAATATTCAAACCTAA+CGG - chr2_3:6822689-6822708 None:intergenic 30.0%
CGTTAGGTTTGAATATTTCA+GGG + chr2_3:6822687-6822706 Msa0274970:three_prime_UTR 30.0%
CTTATGATGATACTCTTTCT+TGG - chr2_3:6822902-6822921 None:intergenic 30.0%
! GATACATTTTCTGACAACAA+TGG + chr2_3:6823033-6823052 Msa0274970:three_prime_UTR 30.0%
ACTGAAATGAATGATCAGAA+TGG + chr2_3:6823186-6823205 Msa0274970:three_prime_UTR 30.0%
AATGAATGATCAGAATGGTT+TGG + chr2_3:6823191-6823210 Msa0274970:three_prime_UTR 30.0%
TTGATCAAAGCATAGAATCT+AGG - chr2_3:6823504-6823523 None:intergenic 30.0%
!! GATTTAAGTTGCAGATAACT+TGG + chr2_3:6823541-6823560 Msa0274970:three_prime_UTR 30.0%
! GATACACTTTAAAAGTAGAG+CGG - chr2_3:6823710-6823729 None:intergenic 30.0%
! ATCTCATCAGAAGTATGATT+TGG + chr2_3:6823794-6823813 Msa0274970:three_prime_UTR 30.0%
!!! GGAATTTGTTGAAGTTTTGT+CGG + chr2_3:6823815-6823834 Msa0274970:three_prime_UTR 30.0%
!!! GTTCCATCTTTTAAAATGAC+TGG + chr2_3:6823978-6823997 Msa0274970:three_prime_UTR 30.0%
!! AGACCAGTCATTTTAAAAGA+TGG - chr2_3:6823984-6824003 None:intergenic 30.0%
!!! ATCTTTTAAAATGACTGGTC+TGG + chr2_3:6823983-6824002 Msa0274970:three_prime_UTR 30.0%
ATCTACTTCCAAGGTTAATT+TGG + chr2_3:6824103-6824122 Msa0274970:three_prime_UTR 30.0%
CATCAAATTGATTGAAGGAA+GGG - chr2_3:6824226-6824245 None:intergenic 30.0%
TTCAGCATCAAATTGATTGA+AGG - chr2_3:6824231-6824250 None:intergenic 30.0%
TCAATCAATTTGATGCTGAA+AGG + chr2_3:6824231-6824250 Msa0274970:three_prime_UTR 30.0%
TCCCATCTAATAACTTTCTT+AGG - chr2_3:6824404-6824423 None:intergenic 30.0%
AGTTATTAGATGGGAAGATA+AGG + chr2_3:6824409-6824428 Msa0274970:three_prime_UTR 30.0%
ATATGAAATTTATCCACGGA+AGG + chr2_3:6824550-6824569 Msa0274970:three_prime_UTR 30.0%
TATGAAATTTATCCACGGAA+GGG + chr2_3:6824551-6824570 Msa0274970:three_prime_UTR 30.0%
TGAAATTTGGGGATTGTATA+GGG + chr2_3:6824574-6824593 Msa0274970:three_prime_UTR 30.0%
!!! AGATGTTTTATTTCTGGAGA+AGG + chr2_3:6824682-6824701 Msa0274970:three_prime_UTR 30.0%
ATTATTCCTTGCTGAGATAA+TGG - chr2_3:6824889-6824908 None:intergenic 30.0%
ATTATCTCAGCAAGGAATAA+TGG + chr2_3:6824888-6824907 Msa0274970:three_prime_UTR 30.0%
TTATCTCAGCAAGGAATAAT+GGG + chr2_3:6824889-6824908 Msa0274970:three_prime_UTR 30.0%
AATGAACTGTAATTATGCAG+GGG - chr2_3:6825087-6825106 None:intergenic 30.0%
CAAATGAACTGTAATTATGC+AGG - chr2_3:6825089-6825108 None:intergenic 30.0%
!! CAGAATGATAGTGGCAATAT+AGG + chr2_3:6819610-6819629 Msa0274970:CDS 35.0%
GAAAGAAAACGTGCTTGTAA+GGG - chr2_3:6819707-6819726 None:intergenic 35.0%
AGAAAGAAAACGTGCTTGTA+AGG - chr2_3:6819708-6819727 None:intergenic 35.0%
AAAAGAGATTTGAACGAACC+TGG - chr2_3:6819768-6819787 None:intergenic 35.0%
TATTCCTCTTCAAATCAGAG+GGG - chr2_3:6819911-6819930 None:intergenic 35.0%
GTATTCCTCTTCAAATCAGA+GGG - chr2_3:6819912-6819931 None:intergenic 35.0%
!! TGGTGGATTTGTATAGAAGA+AGG + chr2_3:6820100-6820119 Msa0274970:CDS 35.0%
ACGTTGTAGAATTAAGTCAC+TGG + chr2_3:6820389-6820408 Msa0274970:intron 35.0%
TGTTCATATGTGTGCTATAC+GGG + chr2_3:6820603-6820622 Msa0274970:intron 35.0%
TTATCACTCTCGTTGAATGT+CGG + chr2_3:6820714-6820733 Msa0274970:intron 35.0%
CACGTTCTTTACCAAATATG+CGG + chr2_3:6820767-6820786 Msa0274970:intron 35.0%
AATGCCTATCATGTCATATG+CGG + chr2_3:6820806-6820825 Msa0274970:intron 35.0%
AAGAAGCAATTATGTAGCAG+TGG - chr2_3:6820865-6820884 None:intergenic 35.0%
AGTAATCATGCAAAAGAGAG+GGG + chr2_3:6821052-6821071 Msa0274970:intron 35.0%
GGTAACAGACAAAAGAAGAA+GGG + chr2_3:6821074-6821093 Msa0274970:intron 35.0%
! GAAAGTTTTGCCATAGAAAG+TGG + chr2_3:6821337-6821356 Msa0274970:intron 35.0%
TCAGATTATCAAACCTCTAG+GGG + chr2_3:6821478-6821497 Msa0274970:intron 35.0%
TACTTATCCAATTCCACATG+TGG + chr2_3:6821747-6821766 Msa0274970:intron 35.0%
GTAAGTTGTACAGAAATTGC+AGG + chr2_3:6821950-6821969 Msa0274970:intron 35.0%
! AATGCGAGGACTGTAATTTT+TGG + chr2_3:6821986-6822005 Msa0274970:three_prime_UTR 35.0%
TGCTGTCATAACTCATAATC+AGG + chr2_3:6822040-6822059 Msa0274970:three_prime_UTR 35.0%
CATAACTCATAATCAGGCTT+TGG + chr2_3:6822046-6822065 Msa0274970:three_prime_UTR 35.0%
!! CTTTGGAATTTAGACTTCGA+TGG + chr2_3:6822063-6822082 Msa0274970:three_prime_UTR 35.0%
!! GATGGATTGCAATAAAGAAG+AGG + chr2_3:6822081-6822100 Msa0274970:three_prime_UTR 35.0%
CAATAAAGAAGAGGCCTTAA+GGG + chr2_3:6822090-6822109 Msa0274970:three_prime_UTR 35.0%
!!! CAAACTTGTTTTTGTCAGGA+TGG - chr2_3:6822372-6822391 None:intergenic 35.0%
AAGCTGCATTTAAGCTGATT+GGG + chr2_3:6822401-6822420 Msa0274970:three_prime_UTR 35.0%
!! CCATGCCATCTATTTTTCAA+CGG + chr2_3:6822506-6822525 Msa0274970:three_prime_UTR 35.0%
ACGTTCCGTTGAAAAATAGA+TGG - chr2_3:6822514-6822533 None:intergenic 35.0%
!! TATTTTTCAACGGAACGTTC+CGG + chr2_3:6822516-6822535 Msa0274970:three_prime_UTR 35.0%
ATCACAGGATTAAAGTTCAC+CGG - chr2_3:6822538-6822557 None:intergenic 35.0%
GGATTTATGTTTGGGAAAAC+GGG - chr2_3:6822577-6822596 None:intergenic 35.0%
GTTGAGGAGGATTTATGTTT+GGG - chr2_3:6822585-6822604 None:intergenic 35.0%
TGTTGAGGAGGATTTATGTT+TGG - chr2_3:6822586-6822605 None:intergenic 35.0%
AGCACATAGTCCAAAAAGTA+GGG - chr2_3:6822657-6822676 None:intergenic 35.0%
CCGTTAGGTTTGAATATTTC+AGG + chr2_3:6822686-6822705 Msa0274970:three_prime_UTR 35.0%
AAGAACAATACTCCGAATCA+CGG + chr2_3:6822826-6822845 Msa0274970:three_prime_UTR 35.0%
! AAGGTGATTTGTATGCTAAG+AGG + chr2_3:6822875-6822894 Msa0274970:three_prime_UTR 35.0%
AGATGTGAAAATTAAGGAGG+TGG + chr2_3:6823290-6823309 Msa0274970:three_prime_UTR 35.0%
GATGTGAAAATTAAGGAGGT+GGG + chr2_3:6823291-6823310 Msa0274970:three_prime_UTR 35.0%
AAAGTCATTGAACTCTGGAT+CGG - chr2_3:6823409-6823428 None:intergenic 35.0%
TTGTCAAAGTCATTGAACTC+TGG - chr2_3:6823414-6823433 None:intergenic 35.0%
AGAGTTCAATGACTTTGACA+AGG + chr2_3:6823413-6823432 Msa0274970:three_prime_UTR 35.0%
GCTGTTTATGATGATACAGA+TGG + chr2_3:6823474-6823493 Msa0274970:three_prime_UTR 35.0%
GTTATCTGCAACTTAAATCC+AGG - chr2_3:6823540-6823559 None:intergenic 35.0%
! GAACATTGGTTGATCTTTAG+TGG - chr2_3:6823661-6823680 None:intergenic 35.0%
AGTATACGATGAGAGAACAT+TGG - chr2_3:6823675-6823694 None:intergenic 35.0%
ATCCTAGAAAAGGAGAAACT+TGG + chr2_3:6823727-6823746 Msa0274970:three_prime_UTR 35.0%
TCCTAGAAAAGGAGAAACTT+GGG + chr2_3:6823728-6823747 Msa0274970:three_prime_UTR 35.0%
!! TTGGGCTCTTTTCAAGAATT+GGG + chr2_3:6823746-6823765 Msa0274970:three_prime_UTR 35.0%
! GTTTTGTCGGATTATGTTGA+AGG + chr2_3:6823828-6823847 Msa0274970:three_prime_UTR 35.0%
!! GGGAGTATTTGTTTCATACT+TGG + chr2_3:6823854-6823873 Msa0274970:three_prime_UTR 35.0%
! TCATACTTGGCTAAGTTGAA+AGG + chr2_3:6823867-6823886 Msa0274970:three_prime_UTR 35.0%
GATTACTCTTCCTGATGATT+TGG + chr2_3:6824067-6824086 Msa0274970:three_prime_UTR 35.0%
GCTTCTTTCCAAATTAACCT+TGG - chr2_3:6824114-6824133 None:intergenic 35.0%
GCATCAAATTGATTGAAGGA+AGG - chr2_3:6824227-6824246 None:intergenic 35.0%
GACGAACTTCCAAAATACTA+TGG + chr2_3:6824305-6824324 Msa0274970:three_prime_UTR 35.0%
ATGGTCAGATTAAATGCGTT+CGG + chr2_3:6824324-6824343 Msa0274970:three_prime_UTR 35.0%
AAGGATATGATCATTTCCTG+TGG + chr2_3:6824428-6824447 Msa0274970:three_prime_UTR 35.0%
!! AACAGAATTGGTGTTGTTGT+AGG - chr2_3:6824489-6824508 None:intergenic 35.0%
GTGAAATTTGGGGATTGTAT+AGG + chr2_3:6824573-6824592 Msa0274970:three_prime_UTR 35.0%
GAAATTTGGGGATTGTATAG+GGG + chr2_3:6824575-6824594 Msa0274970:three_prime_UTR 35.0%
AAACTGTGAGTATGACATAG+TGG + chr2_3:6824631-6824650 Msa0274970:three_prime_UTR 35.0%
TTACTGAAGATGCTGATATG+TGG + chr2_3:6824657-6824676 Msa0274970:three_prime_UTR 35.0%
!!! GTGGACAGATGTTTTATTTC+TGG + chr2_3:6824676-6824695 Msa0274970:three_prime_UTR 35.0%
!! TTATTTCTGGAGAAGGTAAG+TGG + chr2_3:6824689-6824708 Msa0274970:three_prime_UTR 35.0%
! TGGTTACAGTTCAGTTTTCA+AGG + chr2_3:6824709-6824728 Msa0274970:three_prime_UTR 35.0%
! GGTTACAGTTCAGTTTTCAA+GGG + chr2_3:6824710-6824729 Msa0274970:three_prime_UTR 35.0%
AAGGGTAAATTAAGTAACGG+AGG + chr2_3:6824728-6824747 Msa0274970:three_prime_UTR 35.0%
!! CAAGGAATAATGGGTAAGTT+GGG + chr2_3:6824898-6824917 Msa0274970:three_prime_UTR 35.0%
AGCACTAATACAGTGAAACA+AGG - chr2_3:6824939-6824958 None:intergenic 35.0%
GATGAGAGAAGAATCGAAGA+AGG - chr2_3:6819731-6819750 None:intergenic 40.0%
AGATTTGAACGAACCTGGAA+GGG - chr2_3:6819763-6819782 None:intergenic 40.0%
ATTCCTCTTCAAATCAGAGG+GGG - chr2_3:6819910-6819929 None:intergenic 40.0%
CGTATTCCTCTTCAAATCAG+AGG - chr2_3:6819913-6819932 None:intergenic 40.0%
GAACTTGAACACTGCTTGTT+TGG + chr2_3:6820072-6820091 Msa0274970:CDS 40.0%
!!! ACACTGCTTGTTTGGTTTTG+TGG + chr2_3:6820080-6820099 Msa0274970:CDS 40.0%
ACGTTGTAGAATGAAGTCAC+TGG + chr2_3:6820256-6820275 Msa0274970:intron 40.0%
GTTCATATGTGTGCTATACG+GGG + chr2_3:6820604-6820623 Msa0274970:intron 40.0%
TTCATATGTGTGCTATACGG+GGG + chr2_3:6820605-6820624 Msa0274970:intron 40.0%
GGGAGTTAATATGAGAGACT+TGG + chr2_3:6820625-6820644 Msa0274970:intron 40.0%
!! CACACGTGCCTTTTTAATTG+AGG - chr2_3:6820678-6820697 None:intergenic 40.0%
TTCAGCGGAAAAAATTGGGT+GGG - chr2_3:6820840-6820859 None:intergenic 40.0%
TTTCAGCGGAAAAAATTGGG+TGG - chr2_3:6820841-6820860 None:intergenic 40.0%
GGCTTTCAGCGGAAAAAATT+GGG - chr2_3:6820844-6820863 None:intergenic 40.0%
TGGCTTTCAGCGGAAAAAAT+TGG - chr2_3:6820845-6820864 None:intergenic 40.0%
GTAATCATGCAAAAGAGAGG+GGG + chr2_3:6821053-6821072 Msa0274970:intron 40.0%
GGGTAACAGACAAAAGAAGA+AGG + chr2_3:6821073-6821092 Msa0274970:intron 40.0%
GGGTTAATGTGAGAGATTAG+AGG - chr2_3:6821160-6821179 None:intergenic 40.0%
TACAACGTACCCACTTTCTA+TGG - chr2_3:6821350-6821369 None:intergenic 40.0%
TACGTTGTAAGCTCAATGGA+GGG + chr2_3:6821361-6821380 Msa0274970:intron 40.0%
ACTTACAGTTCGCGTATCAA+GGG + chr2_3:6821389-6821408 Msa0274970:intron 40.0%
TTATCCAATTCCACATGTGG+TGG + chr2_3:6821750-6821769 Msa0274970:intron 40.0%
!! CGAGGACTGTAATTTTTGGA+GGG + chr2_3:6821990-6822009 Msa0274970:three_prime_UTR 40.0%
!! GAGGACTGTAATTTTTGGAG+GGG + chr2_3:6821991-6822010 Msa0274970:three_prime_UTR 40.0%
GCAATAAAGAAGAGGCCTTA+AGG + chr2_3:6822089-6822108 Msa0274970:three_prime_UTR 40.0%
ATGGAGAGCAAAGATTTCAC+AGG + chr2_3:6822136-6822155 Msa0274970:three_prime_UTR 40.0%
TGGAGAGCAAAGATTTCACA+GGG + chr2_3:6822137-6822156 Msa0274970:three_prime_UTR 40.0%
TGAGCGATATTCTCCAAATC+AGG - chr2_3:6822199-6822218 None:intergenic 40.0%
TCTGCTGAGCAGAAATTACT+GGG + chr2_3:6822247-6822266 Msa0274970:three_prime_UTR 40.0%
ACTGGGTAATACTAATGTGG+TGG + chr2_3:6822264-6822283 Msa0274970:three_prime_UTR 40.0%
!! GTAATACTAATGTGGTGGAC+TGG + chr2_3:6822269-6822288 Msa0274970:three_prime_UTR 40.0%
ATTGATCGCAATGACCATGA+TGG + chr2_3:6822307-6822326 Msa0274970:three_prime_UTR 40.0%
!! TGTTTTTGTCAGGATGGAGT+TGG - chr2_3:6822366-6822385 None:intergenic 40.0%
!!! CCAGCAAACTTGTTTTTGTC+AGG - chr2_3:6822376-6822395 None:intergenic 40.0%
CCTGACAAAAACAAGTTTGC+TGG + chr2_3:6822373-6822392 Msa0274970:three_prime_UTR 40.0%
GAAGCTGCATTTAAGCTGAT+TGG + chr2_3:6822400-6822419 Msa0274970:three_prime_UTR 40.0%
AGCTGCATTTAAGCTGATTG+GGG + chr2_3:6822402-6822421 Msa0274970:three_prime_UTR 40.0%
! GGAAGCTCAAAGAGTTCTTT+TGG + chr2_3:6822423-6822442 Msa0274970:three_prime_UTR 40.0%
TGAAAAATAGATGGCATGGC+AGG - chr2_3:6822505-6822524 None:intergenic 40.0%
CCGTTGAAAAATAGATGGCA+TGG - chr2_3:6822509-6822528 None:intergenic 40.0%
CTGTGATGCAAACTAATGTC+CGG + chr2_3:6822551-6822570 Msa0274970:three_prime_UTR 40.0%
GAGCACATAGTCCAAAAAGT+AGG - chr2_3:6822658-6822677 None:intergenic 40.0%
! TGTGCTCATTTTGTTCCGTT+AGG + chr2_3:6822671-6822690 Msa0274970:three_prime_UTR 40.0%
TAAGCCCTTCATTGCATATG+AGG + chr2_3:6822747-6822766 Msa0274970:three_prime_UTR 40.0%
AACCGGCAACTAATTCAACT+CGG + chr2_3:6822788-6822807 Msa0274970:three_prime_UTR 40.0%
! AATTCAACTCGGCAAGCTTT+TGG + chr2_3:6822799-6822818 Msa0274970:three_prime_UTR 40.0%
!! GATTCGGAGTATTGTTCTTC+TGG - chr2_3:6822825-6822844 None:intergenic 40.0%
AATGTCTCTGTAAAGCCAGA+TGG + chr2_3:6822937-6822956 Msa0274970:three_prime_UTR 40.0%
TTCCTCTTTCTCTTTCCATC+TGG - chr2_3:6822955-6822974 None:intergenic 40.0%
TATAGACTCGGAACTTTCAC+TGG - chr2_3:6822992-6823011 None:intergenic 40.0%
AGTGAAAGTTCCGAGTCTAT+AGG + chr2_3:6822991-6823010 Msa0274970:three_prime_UTR 40.0%
! TCTGACAACAATGGTTTTCC+TGG + chr2_3:6823042-6823061 Msa0274970:three_prime_UTR 40.0%
AAAACACCAGGTTTCCTACA+AGG + chr2_3:6823110-6823129 Msa0274970:three_prime_UTR 40.0%
TCACGGAAACCTTCAAAACA+GGG + chr2_3:6823156-6823175 Msa0274970:three_prime_UTR 40.0%
GAAACCTTCAAAACAGGGAA+AGG + chr2_3:6823161-6823180 Msa0274970:three_prime_UTR 40.0%
!! GTTTCCTTTCCCTGTTTTGA+AGG - chr2_3:6823168-6823187 None:intergenic 40.0%
TCTGGAAGATGATCAGAAAG+AGG + chr2_3:6823221-6823240 Msa0274970:three_prime_UTR 40.0%
AAAGATAGAGGAAGCTTCAG+AGG + chr2_3:6823338-6823357 Msa0274970:three_prime_UTR 40.0%
AAGTCATTGAACTCTGGATC+GGG - chr2_3:6823408-6823427 None:intergenic 40.0%
CTTTGACAAGGACAAGAAAG+AGG + chr2_3:6823425-6823444 Msa0274970:three_prime_UTR 40.0%
AAAGAGGAATGTTTCGCTTC+TGG + chr2_3:6823441-6823460 Msa0274970:three_prime_UTR 40.0%
AAGAGGAATGTTTCGCTTCT+GGG + chr2_3:6823442-6823461 Msa0274970:three_prime_UTR 40.0%
TGATATTTCCCACAAGCACT+TGG - chr2_3:6823621-6823640 None:intergenic 40.0%
GCTTGTGGGAAATATCAACT+TGG + chr2_3:6823624-6823643 Msa0274970:three_prime_UTR 40.0%
!! CTTGGGCTCTTTTCAAGAAT+TGG + chr2_3:6823745-6823764 Msa0274970:three_prime_UTR 40.0%
CTCTTCTCTCGAATTACGAA+GGG + chr2_3:6823900-6823919 Msa0274970:three_prime_UTR 40.0%
AGTTGTTCAGATTCTCTCAC+AGG + chr2_3:6823955-6823974 Msa0274970:three_prime_UTR 40.0%
GTTGTTCAGATTCTCTCACA+GGG + chr2_3:6823956-6823975 Msa0274970:three_prime_UTR 40.0%
GGATATAGGATCGAGTTCAA+AGG - chr2_3:6824033-6824052 None:intergenic 40.0%
GGAAGAGTAATCTCTTCCAT+CGG - chr2_3:6824059-6824078 None:intergenic 40.0%
! TCCTGATGATTTGGAACTGA+AGG + chr2_3:6824076-6824095 Msa0274970:three_prime_UTR 40.0%
TCCTTCAGTTCCAAATCATC+AGG - chr2_3:6824080-6824099 None:intergenic 40.0%
GAAGGATACATCTACTTCCA+AGG + chr2_3:6824094-6824113 Msa0274970:three_prime_UTR 40.0%
TGTTAGAGCTCCATCAGTTT+CGG + chr2_3:6824175-6824194 Msa0274970:three_prime_UTR 40.0%
AATTGATTGAAGGAAGGGTC+TGG - chr2_3:6824221-6824240 None:intergenic 40.0%
AAGGTCCCATGAAAAGTTTG+AGG + chr2_3:6824250-6824269 Msa0274970:three_prime_UTR 40.0%
CACCATAAAATGCCCAAATC+TGG - chr2_3:6824280-6824299 None:intergenic 40.0%
!! TTGGGCATTTTATGGTGATG+AGG + chr2_3:6824283-6824302 Msa0274970:three_prime_UTR 40.0%
ATTAAATGCGTTCGGAGGAT+TGG + chr2_3:6824332-6824351 Msa0274970:three_prime_UTR 40.0%
CACCAATTCTGTTTCACATC+AGG + chr2_3:6824496-6824515 Msa0274970:three_prime_UTR 40.0%
CACCTGATGTGAAACAGAAT+TGG - chr2_3:6824501-6824520 None:intergenic 40.0%
! TAGTGCTGTTCGAAACAACA+AGG + chr2_3:6824526-6824545 Msa0274970:three_prime_UTR 40.0%
AGATGACCATGACTATCGAT+AGG + chr2_3:6824756-6824775 Msa0274970:three_prime_UTR 40.0%
TTCAAACTGACGGAAGAACA+TGG + chr2_3:6824815-6824834 Msa0274970:three_prime_UTR 40.0%
!! GCAAGGAATAATGGGTAAGT+TGG + chr2_3:6824897-6824916 Msa0274970:three_prime_UTR 40.0%
TAGTGCTAAACTGTTTAGCC+AGG + chr2_3:6824952-6824971 Msa0274970:three_prime_UTR 40.0%
AGTGCTAAACTGTTTAGCCA+GGG + chr2_3:6824953-6824972 Msa0274970:three_prime_UTR 40.0%
ACCAACACAACCTCTTTAAC+AGG - chr2_3:6825140-6825159 None:intergenic 40.0%
!!! TGTTGGTTTTATGCTGCGTT+TGG + chr2_3:6825153-6825172 Msa0274970:three_prime_UTR 40.0%
AGAAAACGTGCTTGTAAGGG+TGG - chr2_3:6819704-6819723 None:intergenic 45.0%
GAGATTTGAACGAACCTGGA+AGG - chr2_3:6819764-6819783 None:intergenic 45.0%
!!! CTGCTTGTTTGGTTTTGTGG+TGG + chr2_3:6820083-6820102 Msa0274970:CDS 45.0%
GTGTTATCATGCGAGATGAG+AGG + chr2_3:6820500-6820519 Msa0274970:intron 45.0%
TCAGCGGAAAAAATTGGGTG+GGG - chr2_3:6820839-6820858 None:intergenic 45.0%
TATGTAGCAGTGGCTTTCAG+CGG - chr2_3:6820855-6820874 None:intergenic 45.0%
CTTTGCCCCTCTTAGTCATA+TGG + chr2_3:6821272-6821291 Msa0274970:intron 45.0%
CACTGCCATATGACTAAGAG+GGG - chr2_3:6821280-6821299 None:intergenic 45.0%
GCACTGCCATATGACTAAGA+GGG - chr2_3:6821281-6821300 None:intergenic 45.0%
TGGGTACGTTGTAAGCTCAA+TGG + chr2_3:6821357-6821376 Msa0274970:intron 45.0%
GTACGTTGTAAGCTCAATGG+AGG + chr2_3:6821360-6821379 Msa0274970:intron 45.0%
GACTTACAGTTCGCGTATCA+AGG + chr2_3:6821388-6821407 Msa0274970:intron 45.0%
CGCGTATCAAGGGTCATTAT+TGG + chr2_3:6821399-6821418 Msa0274970:intron 45.0%
! GATTATCAAACCTCTAGGGG+TGG + chr2_3:6821481-6821500 Msa0274970:intron 45.0%
TATATCCAATCCACCCCTAG+AGG - chr2_3:6821494-6821513 None:intergenic 45.0%
GCAAAAATGATCACGCGTAC+AGG - chr2_3:6821527-6821546 None:intergenic 45.0%
!! GTGGTCTGCTAAGTTTGTTG+TGG + chr2_3:6821769-6821788 Msa0274970:intron 45.0%
ACAGTCCTCGCATTCAGATT+TGG - chr2_3:6821980-6821999 None:intergenic 45.0%
!! GCGAGGACTGTAATTTTTGG+AGG + chr2_3:6821989-6822008 Msa0274970:three_prime_UTR 45.0%
AGCAATATCCTTGGCCCTTA+AGG - chr2_3:6822107-6822126 None:intergenic 45.0%
GGAGAGCAAAGATTTCACAG+GGG + chr2_3:6822138-6822157 Msa0274970:three_prime_UTR 45.0%
GGCTCGTACATTTGCACATA+AGG + chr2_3:6822159-6822178 Msa0274970:three_prime_UTR 45.0%
CTCTGCTGAGCAGAAATTAC+TGG + chr2_3:6822246-6822265 Msa0274970:three_prime_UTR 45.0%
AATAGATGGCATGGCAGGTT+TGG - chr2_3:6822500-6822519 None:intergenic 45.0%
!! CGGACATTAGTTTGCATCAC+AGG - chr2_3:6822553-6822572 None:intergenic 45.0%
TTATGTTTGGGAAAACGGGC+CGG - chr2_3:6822573-6822592 None:intergenic 45.0%
! TTAGACTGCTGTTGCTGTTG+AGG - chr2_3:6822601-6822620 None:intergenic 45.0%
TCTAAGAAGCCAACTCAGCA+GGG + chr2_3:6822616-6822635 Msa0274970:three_prime_UTR 45.0%
CCCACCTCATATGCAATGAA+GGG - chr2_3:6822754-6822773 None:intergenic 45.0%
CCCTTCATTGCATATGAGGT+GGG + chr2_3:6822751-6822770 Msa0274970:three_prime_UTR 45.0%
ACCCACCTCATATGCAATGA+AGG - chr2_3:6822755-6822774 None:intergenic 45.0%
! TGCCGAGTTGAATTAGTTGC+CGG - chr2_3:6822793-6822812 None:intergenic 45.0%
TGAGATCCAACACCAACCTT+AGG - chr2_3:6822856-6822875 None:intergenic 45.0%
!! AAGGTTGGTGTTGGATCTCA+AGG + chr2_3:6822856-6822875 Msa0274970:three_prime_UTR 45.0%
AGCCAGATGGAAAGAGAAAG+AGG + chr2_3:6822950-6822969 Msa0274970:three_prime_UTR 45.0%
ATCAGTGCTGCCTATAGACT+CGG - chr2_3:6823004-6823023 None:intergenic 45.0%
! TCTCTAGAAGTAGAAACGCC+AGG - chr2_3:6823063-6823082 None:intergenic 45.0%
! TTTTGCCGTGAAGATCTACG+TGG - chr2_3:6823093-6823112 None:intergenic 45.0%
ATCTTCACGGCAAAAACACC+AGG + chr2_3:6823098-6823117 Msa0274970:three_prime_UTR 45.0%
CATTCTCCTTGTAGGAAACC+TGG - chr2_3:6823119-6823138 None:intergenic 45.0%
CAGGTTTCCTACAAGGAGAA+TGG + chr2_3:6823117-6823136 Msa0274970:three_prime_UTR 45.0%
GTCACTTCCATTCTCCTTGT+AGG - chr2_3:6823127-6823146 None:intergenic 45.0%
CTCACGGAAACCTTCAAAAC+AGG + chr2_3:6823155-6823174 Msa0274970:three_prime_UTR 45.0%
! GATCAGAATGGTTTGGCTTC+TGG + chr2_3:6823198-6823217 Msa0274970:three_prime_UTR 45.0%
GTGAAAATTAAGGAGGTGGG+AGG + chr2_3:6823294-6823313 Msa0274970:three_prime_UTR 45.0%
GGTGGGAGGAAAAGAAACAA+CGG + chr2_3:6823308-6823327 Msa0274970:three_prime_UTR 45.0%
GTGGGAGGAAAAGAAACAAC+GGG + chr2_3:6823309-6823328 Msa0274970:three_prime_UTR 45.0%
TTTCGCTTCTGGGCAGATAT+GGG + chr2_3:6823452-6823471 Msa0274970:three_prime_UTR 45.0%
AGAAACTGCCAAGTGCTTGT+GGG + chr2_3:6823610-6823629 Msa0274970:three_prime_UTR 45.0%
! GCCCAAGTTTCTCCTTTTCT+AGG - chr2_3:6823732-6823751 None:intergenic 45.0%
CCTTCGTAATTCGAGAGAAG+AGG - chr2_3:6823902-6823921 None:intergenic 45.0%
CCTCTTCTCTCGAATTACGA+AGG + chr2_3:6823899-6823918 Msa0274970:three_prime_UTR 45.0%
TTCTCTCGAATTACGAAGGG+AGG + chr2_3:6823903-6823922 Msa0274970:three_prime_UTR 45.0%
AATCTGAACAACTCAGCTGG+TGG - chr2_3:6823948-6823967 None:intergenic 45.0%
GAGAATCTGAACAACTCAGC+TGG - chr2_3:6823951-6823970 None:intergenic 45.0%
TCTTCCATCGGCAAGGATAT+AGG - chr2_3:6824047-6824066 None:intergenic 45.0%
AGTAATCTCTTCCATCGGCA+AGG - chr2_3:6824054-6824073 None:intergenic 45.0%
GGAAAGAAGCAACTCAGTAG+AGG + chr2_3:6824124-6824143 Msa0274970:three_prime_UTR 45.0%
AAGCAACTCAGTAGAGGAGA+AGG + chr2_3:6824130-6824149 Msa0274970:three_prime_UTR 45.0%
GATTCTGCAACCGAAACTGA+TGG - chr2_3:6824188-6824207 None:intergenic 45.0%
GTCCCATGAAAAGTTTGAGG+CGG + chr2_3:6824253-6824272 Msa0274970:three_prime_UTR 45.0%
! TCCCATGAAAAGTTTGAGGC+GGG + chr2_3:6824254-6824273 Msa0274970:three_prime_UTR 45.0%
! GGCCAGATTTGGGCATTTTA+TGG + chr2_3:6824275-6824294 Msa0274970:three_prime_UTR 45.0%
GTCAGATTAAATGCGTTCGG+AGG + chr2_3:6824327-6824346 Msa0274970:three_prime_UTR 45.0%
ATCCACGGAAGGGTGAAATT+TGG + chr2_3:6824561-6824580 Msa0274970:three_prime_UTR 45.0%
TCCACGGAAGGGTGAAATTT+GGG + chr2_3:6824562-6824581 Msa0274970:three_prime_UTR 45.0%
TTTGGGGATTGTATAGGGGA+TGG + chr2_3:6824579-6824598 Msa0274970:three_prime_UTR 45.0%
GTGAGAGAATCTGAGCAACT+CGG - chr2_3:6824783-6824802 None:intergenic 45.0%
AGTTGCTCAGATTCTCTCAC+AGG + chr2_3:6824783-6824802 Msa0274970:three_prime_UTR 45.0%
GATCCCTGCTTTCAAACTGA+CGG + chr2_3:6824805-6824824 Msa0274970:three_prime_UTR 45.0%
CTTCCGTCAGTTTGAAAGCA+GGG - chr2_3:6824811-6824830 None:intergenic 45.0%
TCTTCCGTCAGTTTGAAAGC+AGG - chr2_3:6824812-6824831 None:intergenic 45.0%
GAACATGGCAGAAATCTGAG+AGG + chr2_3:6824830-6824849 Msa0274970:three_prime_UTR 45.0%
CAGAAATCTGAGAGGCTTCT+GGG + chr2_3:6824838-6824857 Msa0274970:three_prime_UTR 45.0%
ACCACACCATTATCTCAGCA+AGG + chr2_3:6824880-6824899 Msa0274970:three_prime_UTR 45.0%
! TCCTTGCTGAGATAATGGTG+TGG - chr2_3:6824884-6824903 None:intergenic 45.0%
GCAGGTAGAACAACAAACAC+AGG - chr2_3:6825118-6825137 None:intergenic 45.0%
GTTCTACCTGCCTGTTAAAG+AGG + chr2_3:6825127-6825146 Msa0274970:three_prime_UTR 45.0%
ACACAACCTCTTTAACAGGC+AGG - chr2_3:6825136-6825155 None:intergenic 45.0%
GCCTGTTAAAGAGGTTGTGT+TGG + chr2_3:6825136-6825155 Msa0274970:three_prime_UTR 45.0%
!!! TTTATTTTAATTTTATCTAA+CGG - chr2_3:6820538-6820557 None:intergenic 5.0%
!!! ATTTTTTTATATCTTATAAA+AGG - chr2_3:6821714-6821733 None:intergenic 5.0%
TGAACGAACCTGGAAGGGTT+TGG - chr2_3:6819758-6819777 None:intergenic 50.0%
! CTTCCCCCTCTGATTTGAAG+AGG + chr2_3:6819904-6819923 Msa0274970:intron 50.0%
! GGTGCCGCATATGACATGAT+AGG - chr2_3:6820813-6820832 None:intergenic 50.0%
GGAAAAAATTGGGTGGGGTG+AGG - chr2_3:6820834-6820853 None:intergenic 50.0%
! GAGACTTTAGAAGGCTCTGC+TGG + chr2_3:6820989-6821008 Msa0274970:intron 50.0%
TTCCCTCACTGTGGTACAAG+TGG + chr2_3:6821249-6821268 Msa0274970:intron 50.0%
AGCCACTTGTACCACAGTGA+GGG - chr2_3:6821254-6821273 None:intergenic 50.0%
AAGCCACTTGTACCACAGTG+AGG - chr2_3:6821255-6821274 None:intergenic 50.0%
CGCACTGCCATATGACTAAG+AGG - chr2_3:6821282-6821301 None:intergenic 50.0%
! TCAAACCTCTAGGGGTGGAT+TGG + chr2_3:6821486-6821505 Msa0274970:intron 50.0%
CAGACCACCACATGTGGAAT+TGG - chr2_3:6821757-6821776 None:intergenic 50.0%
ACTTAGCAGACCACCACATG+TGG - chr2_3:6821763-6821782 None:intergenic 50.0%
GCTGTCCAAATCTGAATGCG+AGG + chr2_3:6821972-6821991 Msa0274970:three_prime_UTR 50.0%
GGAGGGGACTTATGCATTGT+TGG + chr2_3:6822007-6822026 Msa0274970:three_prime_UTR 50.0%
GTCTAAGAAGCCAACTCAGC+AGG + chr2_3:6822615-6822634 Msa0274970:three_prime_UTR 50.0%
CTAAGAAGCCAACTCAGCAG+GGG + chr2_3:6822617-6822636 Msa0274970:three_prime_UTR 50.0%
!! ATGGCAGTGGCCCTACTTTT+TGG + chr2_3:6822644-6822663 Msa0274970:three_prime_UTR 50.0%
GCCCTTCATTGCATATGAGG+TGG + chr2_3:6822750-6822769 Msa0274970:three_prime_UTR 50.0%
GGGTCCACAGAGTACAAAAC+CGG + chr2_3:6822771-6822790 Msa0274970:three_prime_UTR 50.0%
!!! GTTGCCGGTTTTGTACTCTG+TGG - chr2_3:6822778-6822797 None:intergenic 50.0%
!! ACCTTAGGAGCACCGTGATT+CGG - chr2_3:6822841-6822860 None:intergenic 50.0%
AATCACGGTGCTCCTAAGGT+TGG + chr2_3:6822841-6822860 Msa0274970:three_prime_UTR 50.0%
AGCGTCCACGTAGATCTTCA+CGG + chr2_3:6823085-6823104 Msa0274970:three_prime_UTR 50.0%
GAAGTGACGACGATGACTCA+CGG + chr2_3:6823139-6823158 Msa0274970:three_prime_UTR 50.0%
! GAATGGTTTGGCTTCTGGTC+TGG + chr2_3:6823203-6823222 Msa0274970:three_prime_UTR 50.0%
AACGGGCAGCTCAAAGATAG+AGG + chr2_3:6823326-6823345 Msa0274970:three_prime_UTR 50.0%
GTTTCGCTTCTGGGCAGATA+TGG + chr2_3:6823451-6823470 Msa0274970:three_prime_UTR 50.0%
TCCTCTTCGTCATCTGGATC+TGG - chr2_3:6823573-6823592 None:intergenic 50.0%
GAGAAACTGCCAAGTGCTTG+TGG + chr2_3:6823609-6823628 Msa0274970:three_prime_UTR 50.0%
GTCGGATTATGTTGAAGGCG+CGG + chr2_3:6823833-6823852 Msa0274970:three_prime_UTR 50.0%
! TCGGATTATGTTGAAGGCGC+GGG + chr2_3:6823834-6823853 Msa0274970:three_prime_UTR 50.0%
TCTCGAATTACGAAGGGAGG+TGG + chr2_3:6823906-6823925 Msa0274970:three_prime_UTR 50.0%
CTCGAATTACGAAGGGAGGT+GGG + chr2_3:6823907-6823926 Msa0274970:three_prime_UTR 50.0%
!! ATGACTGGTCTGGAAAGAGC+AGG + chr2_3:6823993-6824012 Msa0274970:three_prime_UTR 50.0%
CGAGTTCAAAGGCTCCTACA+GGG - chr2_3:6824022-6824041 None:intergenic 50.0%
TCGAGTTCAAAGGCTCCTAC+AGG - chr2_3:6824023-6824042 None:intergenic 50.0%
CGATCCTATATCCTTGCCGA+TGG + chr2_3:6824040-6824059 Msa0274970:three_prime_UTR 50.0%
! GCCCGCCTCAAACTTTTCAT+GGG - chr2_3:6824258-6824277 None:intergenic 50.0%
TAGGTGCAGAGCTTACCACT+TGG - chr2_3:6824470-6824489 None:intergenic 50.0%
CCACGGAAGGGTGAAATTTG+GGG + chr2_3:6824563-6824582 Msa0274970:three_prime_UTR 50.0%
CTCGGTCCTATCGATAGTCA+TGG - chr2_3:6824765-6824784 None:intergenic 50.0%
GCAGAAATCTGAGAGGCTTC+TGG + chr2_3:6824837-6824856 Msa0274970:three_prime_UTR 50.0%
! AGGCTTCTGGGAACTTGATC+CGG + chr2_3:6824850-6824869 Msa0274970:three_prime_UTR 50.0%
TAATGGTGTGGTACTGCTGC+CGG - chr2_3:6824872-6824891 None:intergenic 50.0%
! AGGGAGCAGCATTTGCTAAC+CGG + chr2_3:6824972-6824991 Msa0274970:three_prime_UTR 50.0%
CATCCACTCCAAACCCTTCC+AGG + chr2_3:6819747-6819766 Msa0274970:CDS 55.0%
GAACCTGGAAGGGTTTGGAG+TGG - chr2_3:6819753-6819772 None:intergenic 55.0%
AGAAGAGGCCTTAAGGGCCA+AGG + chr2_3:6822096-6822115 Msa0274970:three_prime_UTR 55.0%
! GACTGCTGTTGCTGTTGAGG+AGG - chr2_3:6822598-6822617 None:intergenic 55.0%
CCATTAAGCCCCTGCTGAGT+TGG - chr2_3:6822628-6822647 None:intergenic 55.0%
CCAACTCAGCAGGGGCTTAA+TGG + chr2_3:6822625-6822644 Msa0274970:three_prime_UTR 55.0%
TCCGAATCACGGTGCTCCTA+AGG + chr2_3:6822837-6822856 Msa0274970:three_prime_UTR 55.0%
!! GGTGCTCCTAAGGTTGGTGT+TGG + chr2_3:6822847-6822866 Msa0274970:three_prime_UTR 55.0%
GCCAGATCCAGATGACGAAG+AGG + chr2_3:6823569-6823588 Msa0274970:three_prime_UTR 55.0%
! GGCCCGCCTCAAACTTTTCA+TGG - chr2_3:6824259-6824278 None:intergenic 55.0%
! AGTTTGAGGCGGGCCAGATT+TGG + chr2_3:6824264-6824283 Msa0274970:three_prime_UTR 55.0%
! GTTTGAGGCGGGCCAGATTT+GGG + chr2_3:6824265-6824284 Msa0274970:three_prime_UTR 55.0%
CCCCAAATTTCACCCTTCCG+TGG - chr2_3:6824566-6824585 None:intergenic 55.0%
GGTTAGCAAATGCTGCTCCC+TGG - chr2_3:6824973-6824992 None:intergenic 55.0%
CAGCAGGGGCTTAATGGCAG+TGG + chr2_3:6822631-6822650 Msa0274970:three_prime_UTR 60.0%
CTGCGCTCCTCTTCGTCATC+TGG - chr2_3:6823579-6823598 None:intergenic 60.0%
! CAGATGACGAAGAGGAGCGC+AGG + chr2_3:6823577-6823596 Msa0274970:three_prime_UTR 60.0%
! ATGACGAAGAGGAGCGCAGG+TGG + chr2_3:6823580-6823599 Msa0274970:three_prime_UTR 60.0%
! TGACGAAGAGGAGCGCAGGT+GGG + chr2_3:6823581-6823600 Msa0274970:three_prime_UTR 60.0%
!! AGAGGAGCGCAGGTGGGTTA+AGG + chr2_3:6823587-6823606 Msa0274970:three_prime_UTR 60.0%
GAAAGAGCAGGCGTCCCTGT+AGG + chr2_3:6824005-6824024 Msa0274970:three_prime_UTR 60.0%
GGGAGCGAGTTCCCTCACTG+TGG + chr2_3:6821240-6821259 Msa0274970:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 6819607 6825182 6819607 ID=Msa0274970;Name=Msa0274970
chr2_3 mRNA 6819607 6825182 6819607 ID=Msa0274970-mRNA-1;Parent=Msa0274970;Name=Msa0274970-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.66|1|0.5|0.66|3|3227|74
chr2_3 exon 6819607 6819768 6819607 ID=Msa0274970-mRNA-1:exon:3219;Parent=Msa0274970-mRNA-1
chr2_3 exon 6820066 6820135 6820066 ID=Msa0274970-mRNA-1:exon:3220;Parent=Msa0274970-mRNA-1
chr2_3 exon 6821963 6825182 6821963 ID=Msa0274970-mRNA-1:exon:3221;Parent=Msa0274970-mRNA-1
chr2_3 CDS 6819607 6819768 6819607 ID=Msa0274970-mRNA-1:cds;Parent=Msa0274970-mRNA-1
chr2_3 CDS 6820066 6820128 6820066 ID=Msa0274970-mRNA-1:cds;Parent=Msa0274970-mRNA-1
chr2_3 three_prime_UTR 6820129 6820135 6820129 ID=Msa0274970-mRNA-1:three_prime_utr;Parent=Msa0274970-mRNA-1
chr2_3 three_prime_UTR 6821963 6825182 6821963 ID=Msa0274970-mRNA-1:three_prime_utr;Parent=Msa0274970-mRNA-1
Gene Sequence

>Msa0274970

ATGCAGAATGATAGTGGCAATATAGGAAGAAAACAACCTAAGAGTACTACTAATAACAATAACAATGATATTGAGAAGCTGTTTCTTCAACTCTCCACCCTTACAAGCACGTTTTCTTTCTCCTTCTTCGATTCTTCTCTCATCCACTCCAAACCCTTCCAGGTTTCGGAACTTGAACACTGCTTGTTTGGTTTTGTGGTGGATTTGTATAGAAGAAGGTGTTGA
Protein sequence

>Msa0274970

MQNDSGNIGRKQPKSTTNNNNNDIEKLFLQLSTLTSTFSFSFFDSSLIHSKPFQVSELEHCLFGFVVDLYRRRC*