AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0203820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0203820 MtrunA17_Chr2g0301621 99.751 804 2 0 1 804 1 804 0.0 1660
Msa0203820 MtrunA17_Chr4g0070011 88.750 800 90 0 4 803 6 805 0.0 1483
Msa0203820 MtrunA17_Chr7g0269581 70.025 804 239 2 2 804 5 807 0.0 1199
Msa0203820 MtrunA17_Chr1g0195241 71.354 768 215 3 35 798 20 786 0.0 1160
Msa0203820 MtrunA17_Chr5g0433761 54.523 807 361 4 3 804 6 811 0.0 934
Msa0203820 MtrunA17_Chr3g0109841 55.742 775 337 4 35 804 41 814 0.0 929
Msa0203820 MtrunA17_Chr6g0481131 54.568 799 357 4 10 803 15 812 0.0 919
Msa0203820 MtrunA17_Chr6g0481171 57.771 682 285 2 124 803 4 684 0.0 840
Msa0203820 MtrunA17_Chr6g0481241 50.602 166 60 1 629 794 1 144 1.64e-54 188
Msa0203820 MtrunA17_Chr6g0481261 72.000 100 28 0 632 731 4 103 9.17e-47 161
Msa0203820 MtrunA17_Chr4g0064501 28.155 515 301 19 277 751 168 653 6.64e-38 152
Msa0203820 MtrunA17_Chr5g0443091 26.306 536 310 22 277 760 171 673 4.05e-36 147
Msa0203820 MtrunA17_Chr3g0096241 25.235 531 319 19 277 760 167 666 8.79e-36 146
Msa0203820 MtrunA17_Chr6g0481151 65.714 70 21 2 563 630 27 95 8.12e-21 88.6
Msa0203820 MtrunA17_Chr7g0223521 67.273 55 18 0 124 178 27 81 1.90e-16 75.5
Msa0203820 MtrunA17_Chr6g0481161 63.636 44 16 0 681 724 1 44 6.15e-15 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0203820 AT3G43190.2 83.146 801 135 0 4 804 8 808 0.0 1410
Msa0203820 AT3G43190.1 83.146 801 135 0 4 804 8 808 0.0 1410
Msa0203820 AT5G20830.3 81.398 801 149 0 4 804 8 808 0.0 1367
Msa0203820 AT5G20830.2 81.398 801 149 0 4 804 8 808 0.0 1367
Msa0203820 AT5G20830.1 81.398 801 149 0 4 804 8 808 0.0 1367
Msa0203820 AT4G02280.1 67.289 804 260 2 4 804 6 809 0.0 1173
Msa0203820 AT5G49190.1 68.454 802 250 2 6 804 5 806 0.0 1169
Msa0203820 AT5G49190.2 68.966 783 240 2 25 804 14 796 0.0 1154
Msa0203820 AT5G49190.3 71.042 739 213 1 67 804 2 740 0.0 1134
Msa0203820 AT1G73370.3 56.219 804 346 4 2 800 7 809 0.0 950
Msa0203820 AT1G73370.1 56.219 804 346 4 2 800 7 809 0.0 950
Msa0203820 AT1G73370.2 57.833 766 317 4 40 800 1 765 0.0 935
Msa0203820 AT5G37180.1 52.065 799 374 5 7 800 5 799 0.0 885
Msa0203820 AT5G37180.2 58.007 612 254 2 191 800 1 611 0.0 788
Msa0203820 AT5G37180.3 60.469 554 216 2 249 800 1 553 0.0 745
Msa0203820 AT4G10120.4 27.379 515 304 19 277 751 23 507 8.13e-40 159
Msa0203820 AT4G10120.2 27.379 515 304 19 277 751 197 681 1.23e-39 158
Msa0203820 AT4G10120.3 27.379 515 304 19 277 751 197 681 1.23e-39 158
Msa0203820 AT4G10120.1 27.379 515 304 19 277 751 197 681 1.23e-39 158
Msa0203820 AT4G10120.5 27.308 509 300 19 283 751 2 480 1.98e-38 154
Msa0203820 AT5G20280.1 26.557 546 327 19 277 778 170 685 2.22e-36 148
Msa0203820 AT1G04920.1 26.554 531 312 22 277 760 172 671 1.31e-35 146
Msa0203820 AT5G11110.1 25.735 544 315 20 277 771 177 680 3.33e-35 144

Find 246 sgRNAs with CRISPR-Local

Find 526 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTCACAGGATTGAAATTT+TGG 0.126047 2_1:-28309438 Msa0203820:CDS
CTCCAAATTTCGCTATAAAA+AGG 0.128540 2_1:-28313030 Msa0203820:five_prime_UTR
AATCTAGGTTGTGTACATTT+TGG 0.174039 2_1:-28307738 Msa0203820:intron
TTATTGGAAATCTTCAAATT+TGG 0.183547 2_1:-28304551 Msa0203820:three_prime_UTR
GGCCTTCTCTTCTAAGTCTT+TGG 0.203476 2_1:+28306144 None:intergenic
CTTGCCATTGTGAAGATAAT+TGG 0.208482 2_1:+28306277 None:intergenic
ATTCCCTTCTCTGTTCTAAA+TGG 0.239326 2_1:+28307449 None:intergenic
CACACTGCCTTCACCCTTCC+TGG 0.253911 2_1:-28306762 Msa0203820:CDS
ATTTGCTCTATTTCTTCATT+AGG 0.257257 2_1:-28312877 Msa0203820:five_prime_UTR
CCTGCTATTTATGAAGCTTT+TGG 0.259435 2_1:-28305983 Msa0203820:CDS
TATGTGCCTTCAATTCAATT+TGG 0.259774 2_1:-28304500 Msa0203820:three_prime_UTR
CTAACCTGTCCACCGGTATC+AGG 0.264436 2_1:+28307920 None:intergenic
TTGACCCTAACTGGTGTCTA+TGG 0.275360 2_1:-28305114 Msa0203820:CDS
AATTCAATTTGGGTGTTTAT+TGG 0.278338 2_1:-28304489 Msa0203820:three_prime_UTR
TTCGTCCAAGGCCTGGTGTT+TGG 0.278602 2_1:-28308780 Msa0203820:CDS
TCTTTGTTAGCTCATAAATT+AGG 0.285126 2_1:-28307191 Msa0203820:CDS
GTAAACCTCGTCGTCGTTGC+TGG 0.289826 2_1:-28306184 Msa0203820:CDS
ATCATTGTTCATGGAAAATC+TGG 0.297657 2_1:-28305890 Msa0203820:CDS
ACCCAGAGTCTGAGCTTTAC+TGG 0.301401 2_1:-28307025 Msa0203820:CDS
TTACCAATTTGCTGTACTTA+AGG 0.301757 2_1:+28305025 None:intergenic
AATTCCGAGTAGGGTGTTTC+GGG 0.305391 2_1:+28308151 None:intergenic
GTAAGGCTGATCCATCTTAT+TGG 0.306276 2_1:-28305802 Msa0203820:CDS
CGAAATGATCCAGCTTCTAT+TGG 0.307782 2_1:-28308065 Msa0203820:CDS
GACTCTTAATGTAGTTCTAA+TGG 0.322624 2_1:-28308535 Msa0203820:intron
CTCAGGCTTCACAACTATAA+TGG 0.329859 2_1:-28308355 Msa0203820:CDS
AAATTCCGAGTAGGGTGTTT+CGG 0.330652 2_1:+28308150 None:intergenic
GAATTGGCCGTTTAATTTGT+AGG 0.332537 2_1:+28306090 None:intergenic
CAAACTCAGCAATTACTTGA+TGG 0.333638 2_1:+28309007 None:intergenic
AAAGCTCTCCGTTCCGAATT+CGG 0.333816 2_1:+28306044 None:intergenic
CAACTCCTTTGCAAGTTCAT+TGG 0.335439 2_1:+28307268 None:intergenic
CCTCACAAATGAACCGAATT+CGG 0.338600 2_1:-28306057 Msa0203820:CDS
TAACTGGTGTCTATGGCTTC+TGG 0.339864 2_1:-28305107 Msa0203820:CDS
CAATTACTTGATGGTGTTGT+AGG 0.340347 2_1:+28309016 None:intergenic
ATGTGCCTTCAATTCAATTT+GGG 0.346520 2_1:-28304499 Msa0203820:three_prime_UTR
AAACTAGTTAATGGAGCCTT+TGG 0.352176 2_1:-28308958 Msa0203820:CDS
TCGTCCAAGGCCTGGTGTTT+GGG 0.354122 2_1:-28308779 Msa0203820:CDS
TACCAATTTGCTGTACTTAA+GGG 0.362659 2_1:+28305026 None:intergenic
TGCCCTTAAGTACAGCAAAT+TGG 0.373423 2_1:-28305028 Msa0203820:intron
CACCATGATAAGGATCAATA+TGG 0.381811 2_1:+28305864 None:intergenic
TAAAGAAGTTCTTCAATCTC+AGG 0.382829 2_1:+28306615 None:intergenic
GTGAGGAAATCCATCTGAAT+TGG 0.385686 2_1:+28306074 None:intergenic
CATGTAGTTCCCACTGCATC+AGG 0.398573 2_1:+28307527 None:intergenic
CTACGCTCAGTCTCAGTGTA+TGG 0.401836 2_1:+28306654 None:intergenic
AGTAAGTTCACCTAAACATT+TGG 0.402773 2_1:-28304666 Msa0203820:three_prime_UTR
AAAGCCACAAGTAAATGAAA+TGG 0.406892 2_1:+28312972 None:intergenic
GACCGAGTGAAGAACATTAC+AGG 0.409732 2_1:-28306250 Msa0203820:CDS
TTAATTTGTAGGTCTCGATT+AGG 0.411051 2_1:+28306101 None:intergenic
TTCCAGTAAAGCTCAGACTC+TGG 0.414563 2_1:+28307023 None:intergenic
AAGCCACAAGTAAATGAAAT+GGG 0.415055 2_1:+28312973 None:intergenic
TAAGGCTGATCCATCTTATT+GGG 0.418041 2_1:-28305801 Msa0203820:CDS
CTGAACAAGTCGATTGGAAA+TGG 0.418865 2_1:-28308454 Msa0203820:CDS
GAACACAAATTCCAGGATAG+TGG 0.423851 2_1:-28308127 Msa0203820:CDS
AAACACCCAAATTGAATTGA+AGG 0.428634 2_1:+28304494 None:intergenic
CGTTCTCCAAGGCGCGAACT+TGG 0.429343 2_1:+28307714 None:intergenic
CAAATTCCAGGATAGTGGTT+TGG 0.430669 2_1:-28308122 Msa0203820:CDS
AAATTGCTGTTGGTATGTTT+AGG 0.431627 2_1:-28304629 Msa0203820:three_prime_UTR
AGAAGCCATAGACACCAGTT+AGG 0.433351 2_1:+28305109 None:intergenic
TTCACCCTCGAGAAATTCCT+TGG 0.433410 2_1:-28308019 Msa0203820:CDS
TATCTTCACAATGGCAAGGC+TGG 0.433434 2_1:-28306272 Msa0203820:CDS
TACCATATTGATCCTTATCA+TGG 0.436098 2_1:-28305866 Msa0203820:CDS
GGAATTTGAACACAAATTCC+AGG 0.436372 2_1:-28308134 Msa0203820:CDS
TTTACCTTCCAGCAATCTCT+TGG 0.440269 2_1:+28306910 None:intergenic
TGAATTCTTTGAGAAGAGTA+AGG 0.441019 2_1:-28305819 Msa0203820:CDS
ATCGAGACCTACAAATTAAA+CGG 0.441331 2_1:-28306097 Msa0203820:CDS
AGCCACTGTTGGAATTCCTC+AGG 0.441665 2_1:-28308372 Msa0203820:CDS
TAGTGGTTTGGAGAGAGGCT+GGG 0.447293 2_1:-28308110 Msa0203820:CDS
GGATCTCAAGATTCGAAGTC+TGG 0.450885 2_1:-28307415 Msa0203820:CDS
GGACTTTACCGTGTGGTTCA+CGG 0.453896 2_1:-28306741 Msa0203820:CDS
AGAAGGGAATTGTTCGCAAA+TGG 0.455318 2_1:-28307436 Msa0203820:CDS
AAGCTCAGACTCTGGGTACT+TGG 0.455502 2_1:+28307031 None:intergenic
TCATTACAGATGTGTGTTGA+AGG 0.456041 2_1:-28306311 Msa0203820:intron
GCTTCAAACTTTCTTTGCCA+TGG 0.457880 2_1:+28308392 None:intergenic
TTCTCGAGGGTGAAAGGATC+AGG 0.458802 2_1:+28308028 None:intergenic
TTCGCCCAAGATAATGTCTT+GGG 0.461070 2_1:-28307947 Msa0203820:CDS
CCGACATTTGCAACTTGTAA+TGG 0.461435 2_1:-28305926 Msa0203820:CDS
AGTGGTTTGGAGAGAGGCTG+GGG 0.462129 2_1:-28308109 Msa0203820:CDS
CGAGGAAAAGACGCGTTGAA+TGG 0.466225 2_1:+28308484 None:intergenic
GTTAAAAGGATTGAAGCAAA+GGG 0.468146 2_1:-28309048 Msa0203820:intron
CTTGCTGTTCGTCCAAGGCC+TGG 0.468696 2_1:-28308787 Msa0203820:CDS
TTGCTCTTGCTGTTCGTCCA+AGG 0.470683 2_1:-28308792 Msa0203820:CDS
GTAAATGCTCATATCAGCTC+CGG 0.470864 2_1:+28306680 None:intergenic
TACTCCCAAACACCAGGCCT+TGG 0.471056 2_1:+28308775 None:intergenic
GGTGAGACAATGTTGAACTT+TGG 0.471624 2_1:+28306702 None:intergenic
GTTTGCTCTCACGACGATCA+AGG 0.472761 2_1:+28305070 None:intergenic
TCGAAGAATGTGGCAATGTT+CGG 0.473650 2_1:+28307475 None:intergenic
TAGTTTCCGACGATCAGATC+AGG 0.475507 2_1:+28307236 None:intergenic
TTTGGACCAAGTTCGCGCCT+TGG 0.478871 2_1:-28307720 Msa0203820:CDS
ATAGTGGTTTGGAGAGAGGC+TGG 0.479218 2_1:-28308111 Msa0203820:CDS
GGTATCCCAAGACATTATCT+TGG 0.480082 2_1:+28307942 None:intergenic
CCTGCTGAGATCATTGTTCA+TGG 0.481836 2_1:-28305899 Msa0203820:CDS
AGTACCTTCCAAGAGATTGC+TGG 0.483138 2_1:-28306918 Msa0203820:CDS
TTGTGTTCAAATTCCGAGTA+GGG 0.484194 2_1:+28308142 None:intergenic
TTCCCCATTTCATTTACTTG+TGG 0.484962 2_1:-28312976 Msa0203820:five_prime_UTR
TGAGCAGGTACCTTGACAAA+AGG 0.485813 2_1:+28309414 None:intergenic
TCGTCGTCGTTGCTGGAGAC+AGG 0.489687 2_1:-28306177 Msa0203820:CDS
ATATTGAATGAGACAAGAAA+AGG 0.491889 2_1:+28312898 None:intergenic
AGGAATTTCTCGAGGGTGAA+AGG 0.491963 2_1:+28308022 None:intergenic
ACATTACAGGACTTGTTGAA+TGG 0.494942 2_1:-28306237 Msa0203820:CDS
CCATGAACAATGATCTCAGC+AGG 0.496312 2_1:+28305899 None:intergenic
TTCAAGGAGGAACTTGTTGA+AGG 0.496874 2_1:-28308691 Msa0203820:CDS
CATGGCAGATTTATTCTGAC+AGG 0.500835 2_1:-28305140 Msa0203820:CDS
CTCCTTGAACTTGAGATACT+CGG 0.501482 2_1:+28308705 None:intergenic
TCCAGTAAAGCTCAGACTCT+GGG 0.501940 2_1:+28307024 None:intergenic
TAGCAGAAAGATGGCGATTG+AGG 0.504618 2_1:+28308422 None:intergenic
GCAGCTTGGTCACCATGATA+AGG 0.504961 2_1:+28305854 None:intergenic
CGAAGTAACCATGTGGAGAA+AGG 0.505734 2_1:+28307966 None:intergenic
TGTGTGAAGAGTGAAGAATT+TGG 0.505981 2_1:+28313003 None:intergenic
AATTAAACGGCCAATTCAGA+TGG 0.507944 2_1:-28306084 Msa0203820:CDS
AGAAAGTTTGAAGCCACTGT+TGG 0.510593 2_1:-28308383 Msa0203820:CDS
AATCTCAATATCAAAATCAA+TGG 0.510815 2_1:+28304739 None:intergenic
ATCTTACTCTTCAACAGCAA+GGG 0.512532 2_1:+28304843 None:intergenic
GAGCAGGTACCTTGACAAAA+GGG 0.513195 2_1:+28309415 None:intergenic
TGCTCCCGAAACACCCTACT+CGG 0.514165 2_1:-28308155 Msa0203820:CDS
TGCCGAGTATCTCAAGTTCA+AGG 0.514172 2_1:-28308707 Msa0203820:CDS
CGTGTCATTTGCGACACAAA+GGG 0.514663 2_1:-28306019 Msa0203820:CDS
CGAGAAGATCCAATAGAAGC+TGG 0.515967 2_1:+28308056 None:intergenic
GAAAAGGGTGGCAAAGAATG+AGG 0.516205 2_1:+28312914 None:intergenic
CAATGAACTTGCAAAGGAGT+TGG 0.518656 2_1:-28307267 Msa0203820:CDS
CCGTCTTCTCCCTGATGCAG+TGG 0.520059 2_1:-28307537 Msa0203820:CDS
CCAATCGACTTGTTCAGAGT+TGG 0.521348 2_1:+28308460 None:intergenic
CTTCGCCCAAGATAATGTCT+TGG 0.521487 2_1:-28307948 Msa0203820:CDS
CTCTCTCCAAACCACTATCC+TGG 0.522430 2_1:+28308116 None:intergenic
ATGAATCTCTCACTGCTCAC+AGG 0.524220 2_1:-28309451 Msa0203820:CDS
ACGTATCAAGCAACAAGGCT+TGG 0.525038 2_1:-28307681 Msa0203820:CDS
GTATCCCAAGACATTATCTT+GGG 0.525625 2_1:+28307943 None:intergenic
TTACAGCTCAGTGGAGAATG+AGG 0.526495 2_1:-28306595 Msa0203820:CDS
CCAAAAGCTTCATAAATAGC+AGG 0.526595 2_1:+28305983 None:intergenic
CAGGATAGTGGTTTGGAGAG+AGG 0.526637 2_1:-28308115 Msa0203820:CDS
TGTTAAAAGGATTGAAGCAA+AGG 0.529921 2_1:-28309049 Msa0203820:intron
CTCACGGAGAGAAGTTGAAC+GGG 0.530279 2_1:+28309481 None:intergenic
CCTTCCAGCAATCTCTTGGA+AGG 0.531997 2_1:+28306914 None:intergenic
AGTTCCATTTAGAACAGAGA+AGG 0.533452 2_1:-28307453 Msa0203820:CDS
AATGTGGAGTTAGAGTTTGA+GGG 0.533959 2_1:+28304457 None:intergenic
TCATAAATTAGGCGTAACTC+AGG 0.534056 2_1:-28307180 Msa0203820:intron
CAACGAGAGTCTCAGCAGCT+TGG 0.540496 2_1:+28305840 None:intergenic
ATACCCTGATACCGGTGGAC+AGG 0.541586 2_1:-28307924 Msa0203820:intron
GAAGCCATAGACACCAGTTA+GGG 0.543187 2_1:+28305110 None:intergenic
CCGAATTCGGTTCATTTGTG+AGG 0.543711 2_1:+28306057 None:intergenic
AGGAGGAACTTGTTGAAGGA+AGG 0.543952 2_1:-28308687 Msa0203820:intron
TTTGTGTTCAAATTCCGAGT+AGG 0.546503 2_1:+28308141 None:intergenic
AAGGATTGAAGCAAAGGGGA+AGG 0.547697 2_1:-28309043 Msa0203820:CDS
ACAGGACTTGTTGAATGGTA+CGG 0.548107 2_1:-28306232 Msa0203820:CDS
ATCCAAAGACTTAGAAGAGA+AGG 0.548215 2_1:-28306146 Msa0203820:CDS
AGGATTGAAGCAAAGGGGAA+GGG 0.550201 2_1:-28309042 Msa0203820:CDS
GTGTGAAGAGATTGTGGGAC+TGG 0.552492 2_1:-28304810 Msa0203820:three_prime_UTR
AGACCATAGGGATTCTTCCA+AGG 0.552527 2_1:+28308002 None:intergenic
GTTCAACTTCTCTCCGTGAG+AGG 0.554184 2_1:-28309478 Msa0203820:CDS
GGAAAAGCTTAGCAGAAAGA+TGG 0.555134 2_1:+28308413 None:intergenic
ATAGAAGCTGGATCATTTCG+AGG 0.556921 2_1:+28308068 None:intergenic
GGAGAGAGGCTGGGGTGACA+CGG 0.557920 2_1:-28308101 Msa0203820:CDS
CGGCAAGAATGCTCGCCTGA+GGG 0.558901 2_1:-28306212 Msa0203820:CDS
CCACTGCATCAGGGAGAAGA+CGG 0.559888 2_1:+28307537 None:intergenic
GTTGTCATCCTTTCTCCACA+TGG 0.560561 2_1:-28307974 Msa0203820:CDS
TGGTAACTTTGTGCTTGAGT+TGG 0.561400 2_1:-28308515 Msa0203820:CDS
GTCTTGGGATACCCTGATAC+CGG 0.561417 2_1:-28307932 Msa0203820:CDS
TTGGTTATTGCAGACTATGA+TGG 0.562281 2_1:-28308251 Msa0203820:intron
AAGAAATCCCTGAGGAGAAG+AGG 0.562571 2_1:-28308984 Msa0203820:CDS
CGAACAGCAAGAGCAACAAA+TGG 0.564212 2_1:+28308799 None:intergenic
ATGACAACATTAAAGACCAT+AGG 0.564245 2_1:+28307989 None:intergenic
CCAACTCTGAACAAGTCGAT+TGG 0.567156 2_1:-28308460 Msa0203820:CDS
TATTGAATGAGACAAGAAAA+GGG 0.568952 2_1:+28312899 None:intergenic
TACGCTCAGTCTCAGTGTAT+GGG 0.569999 2_1:+28306655 None:intergenic
CACTGCATCAGGGAGAAGAC+GGG 0.571721 2_1:+28307538 None:intergenic
TAACCTGTCCACCGGTATCA+GGG 0.572337 2_1:+28307921 None:intergenic
TTCTTCCAAGGAATTTCTCG+AGG 0.573017 2_1:+28308014 None:intergenic
GCTGAAGTGTGAAGAGATTG+TGG 0.575427 2_1:-28304816 Msa0203820:three_prime_UTR
GATCATTTCGAGGACACGCT+CGG 0.575605 2_1:+28308078 None:intergenic
CACGAAGTTCATCGACAACA+AGG 0.575747 2_1:+28308731 None:intergenic
ATTCCTTGGAAGAATCCCTA+TGG 0.575921 2_1:-28308005 Msa0203820:CDS
CTCAGATACTCCCAAACACC+AGG 0.576481 2_1:+28308769 None:intergenic
TGACAACATTAAAGACCATA+GGG 0.577414 2_1:+28307990 None:intergenic
CGTCTTCTCCCTGATGCAGT+GGG 0.579457 2_1:-28307536 Msa0203820:CDS
GTTGTTGAAGCTATGACTTG+TGG 0.579504 2_1:-28305953 Msa0203820:CDS
GTCCTGTAATGTTCTTCACT+CGG 0.580858 2_1:+28306248 None:intergenic
GCCGAGATGAAGAAAATGTA+CGG 0.580994 2_1:-28306124 Msa0203820:CDS
GTTAGAGTTTGAGGGAAATG+TGG 0.585866 2_1:+28304465 None:intergenic
TAAATGCTCATATCAGCTCC+GGG 0.590659 2_1:+28306681 None:intergenic
ATATGAAGAAACATAGAATG+AGG 0.592133 2_1:-28313068 Msa0203820:five_prime_UTR
CCATTACAAGTTGCAAATGT+CGG 0.592261 2_1:+28305926 None:intergenic
CGTTGCTGGAGACAGGAGGA+AGG 0.595412 2_1:-28306170 Msa0203820:CDS
GAACTTGCAAAGGAGTTGGA+AGG 0.595807 2_1:-28307263 Msa0203820:CDS
AAAGAAGTTCTTCAATCTCA+GGG 0.596300 2_1:+28306616 None:intergenic
CTTGCATTTCAATTACAACA+AGG 0.596685 2_1:-28312852 Msa0203820:intron
TGAACCACACGGTAAAGTCC+AGG 0.597530 2_1:+28306744 None:intergenic
CATTATAGTTGTGAAGCCTG+AGG 0.598237 2_1:+28308356 None:intergenic
GACTTGTTCAGAGTTGGTCG+AGG 0.602139 2_1:+28308466 None:intergenic
TCTGAGCATCTCGTTCTCCA+AGG 0.604058 2_1:+28307703 None:intergenic
GCTTCTATTGGATCTTCTCG+AGG 0.604364 2_1:-28308053 Msa0203820:CDS
TCACTGAAAGTCTCAAGGTA+GGG 0.604479 2_1:+28307392 None:intergenic
TGTTGCCAATGAACTTGCAA+AGG 0.609688 2_1:-28307273 Msa0203820:CDS
TAAGGGCATAGAACATCTCA+AGG 0.609957 2_1:+28305043 None:intergenic
AAGTTCAACATTGTCTCACC+CGG 0.610294 2_1:-28306699 Msa0203820:CDS
TCACCTCACTGAAAGTCTCA+AGG 0.610558 2_1:+28307387 None:intergenic
AGAACTTCTTTACAGCTCAG+TGG 0.610956 2_1:-28306604 Msa0203820:CDS
CTGAAGTGTGAAGAGATTGT+GGG 0.611188 2_1:-28304815 Msa0203820:three_prime_UTR
GTTCCATTTAGAACAGAGAA+GGG 0.612440 2_1:-28307452 Msa0203820:CDS
AGATCTCAAAACTTCTCCAA+AGG 0.612771 2_1:+28308942 None:intergenic
GTAAAGTCCAGGAAGGGTGA+AGG 0.613197 2_1:+28306755 None:intergenic
GATCTTACTCTTCAACAGCA+AGG 0.613460 2_1:+28304842 None:intergenic
CCGTGTCATTTGCGACACAA+AGG 0.614846 2_1:-28306020 Msa0203820:CDS
AAAAGGGTGGCAAAGAATGA+GGG 0.615660 2_1:+28312915 None:intergenic
ACGGCAAGAATGCTCGCCTG+AGG 0.618531 2_1:-28306213 Msa0203820:CDS
GCAAAGAATGAGGGAAAGCA+AGG 0.619825 2_1:+28312924 None:intergenic
TCTTACAGCAAGGATACTGT+TGG 0.620279 2_1:-28306798 Msa0203820:intron
CTCAGACGTATCAAGCAACA+AGG 0.621096 2_1:-28307686 Msa0203820:CDS
TCTTACTCTTCAACAGCAAG+GGG 0.621368 2_1:+28304844 None:intergenic
CGAGGTTTACTAGCTCCCTC+AGG 0.621910 2_1:+28306197 None:intergenic
CCTTTGTGTCGCAAATGACA+CGG 0.621984 2_1:+28306020 None:intergenic
CATCGATACCGTGAACCACA+CGG 0.622524 2_1:+28306733 None:intergenic
ACATTTGCAACTTGTAATGG+TGG 0.624115 2_1:-28305923 Msa0203820:CDS
CTCACTGAAAGTCTCAAGGT+AGG 0.625955 2_1:+28307391 None:intergenic
GCTTCACAACTATAATGGAA+AGG 0.633989 2_1:-28308350 Msa0203820:intron
GGAAAACCTGATCTGATCGT+CGG 0.634848 2_1:-28307242 Msa0203820:CDS
TCGTCGTTGCTGGAGACAGG+AGG 0.634930 2_1:-28306174 Msa0203820:CDS
TATTGGGACAAAATCTCACA+TGG 0.639281 2_1:-28305785 Msa0203820:CDS
GAGATTCATCAAACCTCTCA+CGG 0.641200 2_1:+28309465 None:intergenic
ACAGCAAGAGCAACAAATGG+TGG 0.641715 2_1:+28308802 None:intergenic
TTGGGATACCCTGATACCGG+TGG 0.642154 2_1:-28307929 Msa0203820:CDS
CAATTATCTTCACAATGGCA+AGG 0.645721 2_1:-28306276 Msa0203820:CDS
ATCGTCGGAAACTACAGTGA+CGG 0.646568 2_1:-28307227 Msa0203820:CDS
CAAGCCAATTATCTTCACAA+TGG 0.650586 2_1:-28306281 Msa0203820:CDS
ATGTAGTTCCCACTGCATCA+GGG 0.651011 2_1:+28307528 None:intergenic
TCTCACGGAGAGAAGTTGAA+CGG 0.651030 2_1:+28309480 None:intergenic
TCTTCCAAGGAATTTCTCGA+GGG 0.651573 2_1:+28308015 None:intergenic
AGCCACAAGTAAATGAAATG+GGG 0.656262 2_1:+28312974 None:intergenic
GAACATACAATGAGAATGCG+AGG 0.657678 2_1:+28307650 None:intergenic
CCACACGGTAAAGTCCAGGA+AGG 0.660583 2_1:+28306748 None:intergenic
TGAAGATAATTGGCTTGCTG+CGG 0.663234 2_1:+28306287 None:intergenic
TGTCTCCAGCAACGACGACG+AGG 0.663856 2_1:+28306179 None:intergenic
CCTTCCAAGAGATTGCTGGA+AGG 0.664168 2_1:-28306914 Msa0203820:intron
CAAATGAACCGAATTCGGAA+CGG 0.665343 2_1:-28306052 Msa0203820:CDS
TAATTTATGAGCTAACAAAG+AGG 0.668235 2_1:+28307193 None:intergenic
TAAATGGAACTCGAAGAATG+TGG 0.681789 2_1:+28307465 None:intergenic
CCTTCCTGGACTTTACCGTG+TGG 0.684012 2_1:-28306748 Msa0203820:CDS
TTAAAAGGATTGAAGCAAAG+GGG 0.690144 2_1:-28309047 Msa0203820:intron
CACACGGTAAAGTCCAGGAA+GGG 0.700015 2_1:+28306749 None:intergenic
CTACCTTGAGACTTTCAGTG+AGG 0.714222 2_1:-28307390 Msa0203820:intron
GAAGTTCTTCAATCTCAGGG+TGG 0.724225 2_1:+28306619 None:intergenic
CGAGTATCTCAAGTTCAAGG+AGG 0.731271 2_1:-28308704 Msa0203820:CDS
TCTTGGGCGAAGTAACCATG+TGG 0.731443 2_1:+28307959 None:intergenic
TGAATGAGACAAGAAAAGGG+TGG 0.734498 2_1:+28312902 None:intergenic
GATGCAGTGGGAACTACATG+TGG 0.734555 2_1:-28307524 Msa0203820:CDS
TGAGTTTGAAGAAATCCCTG+AGG 0.737076 2_1:-28308992 Msa0203820:CDS
AGCCTGAGGAATTCCAACAG+TGG 0.740321 2_1:+28308370 None:intergenic
TGGGACAAAATCTCACATGG+AGG 0.743384 2_1:-28305782 Msa0203820:CDS
TTGTGATGATAAAATCTGTG+TGG 0.754238 2_1:+28306940 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTGATGTTATATTTTTTT+TGG + chr2_1:28306127-28306146 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr2_1:28306685-28306704 Msa0203820:CDS 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr2_1:28306686-28306705 Msa0203820:CDS 10.0%
!! AAAATGAAATATATTGTATT+GGG - chr2_1:28306710-28306729 Msa0203820:CDS 10.0%
!!! TTATTATTTTGTTTATGTTA+TGG - chr2_1:28307580-28307599 Msa0203820:intron 10.0%
!! AATTAATATTATCATTCTTT+AGG - chr2_1:28307855-28307874 Msa0203820:intron 10.0%
!!! TTTATATTATTTTTGTTACA+TGG - chr2_1:28307990-28308009 Msa0203820:CDS 10.0%
!! GAATAAAATTATATTTAACT+AGG + chr2_1:28312641-28312660 None:intergenic 10.0%
!!! AAAAGAAAGTTTAATTTTGA+TGG - chr2_1:28305831-28305850 Msa0203820:CDS 15.0%
!!! AAAGAAAGTTTAATTTTGAT+GGG - chr2_1:28305832-28305851 Msa0203820:CDS 15.0%
!! AATTAAGATGTAATAATACA+TGG + chr2_1:28306519-28306538 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr2_1:28306687-28306706 Msa0203820:CDS 15.0%
!! GAAAATGAAATATATTGTAT+TGG - chr2_1:28306709-28306728 Msa0203820:CDS 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr2_1:28306753-28306772 Msa0203820:CDS 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr2_1:28306754-28306773 Msa0203820:CDS 15.0%
!!! GACACTTTTTTTTAAAAAAT+GGG - chr2_1:28306823-28306842 Msa0203820:intron 15.0%
!! TAGAAAGAAAAAAAAATTGA+GGG + chr2_1:28306891-28306910 None:intergenic 15.0%
!! TATATTTCGTCAAAAATATA+TGG - chr2_1:28306948-28306967 Msa0203820:CDS 15.0%
!! ATATTTCGTCAAAAATATAT+GGG - chr2_1:28306949-28306968 Msa0203820:CDS 15.0%
!!! AATATTTTACCTTTTTTGTT+TGG - chr2_1:28307017-28307036 Msa0203820:CDS 15.0%
!!! TTTCTTTTTGTCTTATTTTA+TGG - chr2_1:28307406-28307425 Msa0203820:CDS 15.0%
!! AAAATAAAAAATAATTGAGC+AGG + chr2_1:28308156-28308175 None:intergenic 15.0%
!!! TTTATTTTTTGATGATGTTT+GGG + chr2_1:28308300-28308319 None:intergenic 15.0%
!!! TCATAGTTTTCATAATATTA+AGG - chr2_1:28309673-28309692 Msa0203820:intron 15.0%
!!! GTTAATTTCTAGAATTTTTT+TGG - chr2_1:28312580-28312599 Msa0203820:intron 15.0%
!!! AACAGCAATTTTTTTTTTTT+GGG + chr2_1:28312914-28312933 None:intergenic 15.0%
!!! TACTTTATTTTTTCCATTTT+TGG - chr2_1:28312975-28312994 Msa0203820:five_prime_UTR 15.0%
!!! ATTCTTGTTATAATGTCTTT+AGG - chr2_1:28304751-28304770 Msa0203820:three_prime_UTR 20.0%
!! TGATACTTAATATATAAGCT+TGG - chr2_1:28304801-28304820 Msa0203820:three_prime_UTR 20.0%
!! AGATCAAATCAAATGTATTT+CGG - chr2_1:28304833-28304852 Msa0203820:exon 20.0%
!!! CTAAACTTTTAAGCAAAAAT+CGG + chr2_1:28304916-28304935 None:intergenic 20.0%
!!! ATACTTTAGTACTATTTTTG+TGG + chr2_1:28304996-28305015 None:intergenic 20.0%
!!! TGTTTTAAATTTTAATCCCT+TGG + chr2_1:28305039-28305058 None:intergenic 20.0%
!! AATTCCATTTCTGTTAATAA+AGG + chr2_1:28305064-28305083 None:intergenic 20.0%
!!! ATATTGAGCGTATTTTTATA+TGG - chr2_1:28305155-28305174 Msa0203820:intron 20.0%
!!! AAGAAAGTTTAATTTTGATG+GGG - chr2_1:28305833-28305852 Msa0203820:CDS 20.0%
!!! AATTTTTTGATTTCAACTGA+TGG + chr2_1:28305938-28305957 None:intergenic 20.0%
!! TTGAAATCAAAAAATTACAG+TGG - chr2_1:28305942-28305961 Msa0203820:CDS 20.0%
!!! GATGTTATATTTTTTTTGGT+TGG + chr2_1:28306123-28306142 None:intergenic 20.0%
!!! ATAACATCAATTTTCAATGT+AGG - chr2_1:28306135-28306154 Msa0203820:CDS 20.0%
!!! TAACATCAATTTTCAATGTA+GGG - chr2_1:28306136-28306155 Msa0203820:CDS 20.0%
!! AATATATGACTAGAACTTAA+CGG - chr2_1:28306475-28306494 Msa0203820:intron 20.0%
!! TTACATCTTAATTTATACCT+TGG - chr2_1:28306526-28306545 Msa0203820:intron 20.0%
!! TACATCTTAATTTATACCTT+GGG - chr2_1:28306527-28306546 Msa0203820:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr2_1:28306786-28306805 Msa0203820:CDS 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - chr2_1:28306787-28306806 Msa0203820:CDS 20.0%
!!! GGACACTTTTTTTTAAAAAA+TGG - chr2_1:28306822-28306841 Msa0203820:intron 20.0%
!! CTAGAAAGAAAAAAAAATTG+AGG + chr2_1:28306892-28306911 None:intergenic 20.0%
!! TATTTCGTCAAAAATATATG+GGG - chr2_1:28306950-28306969 Msa0203820:CDS 20.0%
!! TGTTAATTTATAGACAAGAA+TGG + chr2_1:28307074-28307093 None:intergenic 20.0%
!!! AATCTTTAACTCTGTTTTTA+AGG - chr2_1:28307364-28307383 Msa0203820:intron 20.0%
!!! TGTCTTATTTTATGGTATTA+CGG - chr2_1:28307414-28307433 Msa0203820:CDS 20.0%
!!! TTTTTGCTATTTTTTTCTTG+TGG - chr2_1:28307452-28307471 Msa0203820:CDS 20.0%
!!! TTTTGCTATTTTTTTCTTGT+GGG - chr2_1:28307453-28307472 Msa0203820:CDS 20.0%
!!! AATTATAAACTAAGTATTGC+AGG + chr2_1:28307631-28307650 None:intergenic 20.0%
!! ACTATTAAAAAATTGCATCT+TGG - chr2_1:28307770-28307789 Msa0203820:intron 20.0%
!!! ATATTATTTTTGTTACATGG+TGG - chr2_1:28307993-28308012 Msa0203820:CDS 20.0%
!!! TTATTTTTTGATGATGTTTG+GGG + chr2_1:28308299-28308318 None:intergenic 20.0%
!!! CTTTATTTTTTGATGATGTT+TGG + chr2_1:28308301-28308320 None:intergenic 20.0%
!! AACAATCTTAGTCTATAATT+CGG + chr2_1:28308449-28308468 None:intergenic 20.0%
!! TGTTACAATGAATCTATATT+TGG - chr2_1:28308671-28308690 Msa0203820:intron 20.0%
!!! GTTTTGATTTTACTGAATTA+TGG - chr2_1:28309276-28309295 Msa0203820:intron 20.0%
!!! ATTTTACTGAATTATGGTTT+TGG - chr2_1:28309282-28309301 Msa0203820:intron 20.0%
!! TATGAAAACTATGATTTATC+AGG + chr2_1:28309667-28309686 None:intergenic 20.0%
!!! ATATAAGTTTTAAATTGCGA+TGG + chr2_1:28309726-28309745 None:intergenic 20.0%
!!! TATTCATAAGTTTGTTTCTA+AGG - chr2_1:28310682-28310701 Msa0203820:intron 20.0%
!!! TTGAAGTTTCGTTAATTTTA+GGG + chr2_1:28311011-28311030 None:intergenic 20.0%
!!! TTTGAAGTTTCGTTAATTTT+AGG + chr2_1:28311012-28311031 None:intergenic 20.0%
!! TTCAAAATGATTACTGAAAT+TGG - chr2_1:28311026-28311045 Msa0203820:intron 20.0%
!! TGTGAAATATTAGGTAAAAA+AGG + chr2_1:28311903-28311922 None:intergenic 20.0%
!!! GATGATTTTTGTGAAATATT+AGG + chr2_1:28311912-28311931 None:intergenic 20.0%
!!! GATTATTTTGGTGAAATATT+AGG + chr2_1:28311966-28311985 None:intergenic 20.0%
!!! ACTCAAGGTTTTAATTTTTT+TGG - chr2_1:28311991-28312010 Msa0203820:intron 20.0%
!!! ACTGATATTAATTTGAGTAT+CGG + chr2_1:28312207-28312226 None:intergenic 20.0%
!! AATCTCAATATCAAAATCAA+TGG + chr2_1:28312816-28312835 None:intergenic 20.0%
!!! CAACAGCAATTTTTTTTTTT+TGG + chr2_1:28312915-28312934 None:intergenic 20.0%
!! CAAAAAAAAAAAATTGCTGT+TGG - chr2_1:28312913-28312932 Msa0203820:five_prime_UTR 20.0%
!! TTATTGGAAATCTTCAAATT+TGG - chr2_1:28313001-28313020 Msa0203820:five_prime_UTR 20.0%
! ATATGAAGAAACATAGAATG+AGG - chr2_1:28304484-28304503 Msa0203820:three_prime_UTR 25.0%
! TCCAAATTTCGCTATAAAAA+GGG - chr2_1:28304523-28304542 Msa0203820:three_prime_UTR 25.0%
! TATTGAATGAGACAAGAAAA+GGG + chr2_1:28304656-28304675 None:intergenic 25.0%
! ATATTGAATGAGACAAGAAA+AGG + chr2_1:28304657-28304676 None:intergenic 25.0%
!! ATTTGCTCTATTTCTTCATT+AGG - chr2_1:28304675-28304694 Msa0203820:three_prime_UTR 25.0%
!! TTAGGTGTAAGATTTTGAAT+TGG - chr2_1:28304769-28304788 Msa0203820:three_prime_UTR 25.0%
! AATCAAATGTATTTCGGATA+TGG - chr2_1:28304839-28304858 Msa0203820:exon 25.0%
! AGTTTAGATATTGAAATTGC+AGG - chr2_1:28304929-28304948 Msa0203820:intron 25.0%
! ATTAATAATTGAAGTGACCA+AGG - chr2_1:28305019-28305038 Msa0203820:intron 25.0%
! TTAATAATTGAAGTGACCAA+GGG - chr2_1:28305020-28305039 Msa0203820:intron 25.0%
! CAAACCTTTATTAACAGAAA+TGG - chr2_1:28305057-28305076 Msa0203820:CDS 25.0%
! AAAATACGCTCAATATCAAT+AGG + chr2_1:28305151-28305170 None:intergenic 25.0%
! GTGTTCATATACATTTATGA+TGG - chr2_1:28305177-28305196 Msa0203820:intron 25.0%
!!! TTTTCCTTTGATTTTATCCA+TGG + chr2_1:28305400-28305419 None:intergenic 25.0%
!!! AGAGTTCTAAAACTTTATAG+TGG - chr2_1:28305580-28305599 Msa0203820:intron 25.0%
!!! GAGTTCTAAAACTTTATAGT+GGG - chr2_1:28305581-28305600 Msa0203820:intron 25.0%
!! AACATCAATTTTCAATGTAG+GGG - chr2_1:28306137-28306156 Msa0203820:CDS 25.0%
! ATAAAAGAAAGTGGAAAGAA+TGG + chr2_1:28306204-28306223 None:intergenic 25.0%
! TTGTTTGGTATAAAAGAAAG+TGG + chr2_1:28306213-28306232 None:intergenic 25.0%
! GAGATGATTATTTAGTTGTT+TGG + chr2_1:28306228-28306247 None:intergenic 25.0%
! TTGTGTCAATTAAATTGAGA+CGG + chr2_1:28306646-28306665 None:intergenic 25.0%
! TATTGAAAATTGAAATGGGT+CGG - chr2_1:28306791-28306810 Msa0203820:CDS 25.0%
!! CAATGATCTTTAAGAGTTTA+AGG + chr2_1:28307282-28307301 None:intergenic 25.0%
! AAGTTTGTAACATTGATCTT+TGG - chr2_1:28307321-28307340 Msa0203820:intron 25.0%
!!! TAACATTGATCTTTGGTTTT+TGG - chr2_1:28307328-28307347 Msa0203820:intron 25.0%
!!! TTTGCTATTTTTTTCTTGTG+GGG - chr2_1:28307454-28307473 Msa0203820:CDS 25.0%
! ATTATCATTCTTTAGGTAGT+TGG - chr2_1:28307862-28307881 Msa0203820:intron 25.0%
! TCTAGATGATTAGATTGAAT+TGG + chr2_1:28307915-28307934 None:intergenic 25.0%
! TATAGACTAAGATTGTTGTA+TGG - chr2_1:28308452-28308471 Msa0203820:CDS 25.0%
! CAAAATCTCATGATGTTAAA+AGG - chr2_1:28308490-28308509 Msa0203820:CDS 25.0%
! TACAATGAATCTATATTTGG+TGG - chr2_1:28308674-28308693 Msa0203820:intron 25.0%
!!! GTTTGTTAAGAGTTTTCTTT+TGG - chr2_1:28308698-28308717 Msa0203820:CDS 25.0%
!!! AACTCTTAATGTAGTTCTAA+TGG - chr2_1:28308981-28309000 Msa0203820:CDS 25.0%
!! CAATATAACTGCAATTTTGA+TGG - chr2_1:28309700-28309719 Msa0203820:intron 25.0%
! TTAACAAAAATCACAAGAAG+TGG + chr2_1:28309984-28310003 None:intergenic 25.0%
!!! GTATTTTTTTCCCTTTCATT+AGG - chr2_1:28310255-28310274 Msa0203820:intron 25.0%
! TAATTTATGAGCTAACAAAG+AGG + chr2_1:28310362-28310381 None:intergenic 25.0%
! TCTTTGTTAGCTCATAAATT+AGG - chr2_1:28310361-28310380 Msa0203820:intron 25.0%
!!! CAACTTTTTTAGGAACTAAA+AGG + chr2_1:28310408-28310427 None:intergenic 25.0%
!!! CAAACGATAACAACTTTTTT+AGG + chr2_1:28310418-28310437 None:intergenic 25.0%
! TTAAAACAAGGTAGAAACTT+AGG + chr2_1:28310461-28310480 None:intergenic 25.0%
!! AGGTTTTGCGAAATAAAAAT+GGG + chr2_1:28311203-28311222 None:intergenic 25.0%
! ACTATTATTGTGAGTGATAA+TGG + chr2_1:28311876-28311895 None:intergenic 25.0%
! GGTGAAATATTAGGTAAAAA+AGG + chr2_1:28311957-28311976 None:intergenic 25.0%
!! TGATATTAATTTGAGTATCG+GGG + chr2_1:28312205-28312224 None:intergenic 25.0%
!! CTGATATTAATTTGAGTATC+GGG + chr2_1:28312206-28312225 None:intergenic 25.0%
!!! CTCTAGTAAAATTTTTGGTA+AGG + chr2_1:28312289-28312308 None:intergenic 25.0%
!! CTTACCAAAAATTTTACTAG+AGG - chr2_1:28312287-28312306 Msa0203820:intron 25.0%
!! TGATCCTCTAGTAAAATTTT+TGG + chr2_1:28312294-28312313 None:intergenic 25.0%
!!! TTTTATTGCTTTTCCTCAAT+AGG - chr2_1:28312385-28312404 Msa0203820:intron 25.0%
!!! TGTCATTTTTGTGATCTTTT+AGG - chr2_1:28312674-28312693 Msa0203820:intron 25.0%
!!! TTTTTATTGTTTGGAGTTGA+TGG - chr2_1:28312766-28312785 Msa0203820:intron 25.0%
!!! TTTCCATTTTTGGATCTTAT+TGG - chr2_1:28312985-28313004 Msa0203820:five_prime_UTR 25.0%
! TTTCCAATAAGATCCAAAAA+TGG + chr2_1:28312991-28313010 None:intergenic 25.0%
! AATTCAATTTGGGTGTTTAT+TGG - chr2_1:28313063-28313082 Msa0203820:five_prime_UTR 25.0%
CTCCAAATTTCGCTATAAAA+AGG - chr2_1:28304522-28304541 Msa0203820:three_prime_UTR 30.0%
CCAAATTTCGCTATAAAAAG+GGG - chr2_1:28304524-28304543 Msa0203820:three_prime_UTR 30.0%
AAGCCACAAGTAAATGAAAT+GGG + chr2_1:28304582-28304601 None:intergenic 30.0%
AAAGCCACAAGTAAATGAAA+TGG + chr2_1:28304583-28304602 None:intergenic 30.0%
! CTTTATCATTCTTTTGCGTT+TGG - chr2_1:28304599-28304618 Msa0203820:three_prime_UTR 30.0%
CTTGCATTTCAATTACAACA+AGG - chr2_1:28304700-28304719 Msa0203820:three_prime_UTR 30.0%
ACAATATTCAATGTGGTATG+TGG + chr2_1:28304969-28304988 None:intergenic 30.0%
GAACACGAAATACTCATATA+TGG - chr2_1:28305218-28305237 Msa0203820:intron 30.0%
GTTAATCCAAATTCTTCATG+AGG - chr2_1:28305273-28305292 Msa0203820:intron 30.0%
CATAAACCTCATGAAGAATT+TGG + chr2_1:28305282-28305301 None:intergenic 30.0%
CAAATTCTTCATGAGGTTTA+TGG - chr2_1:28305280-28305299 Msa0203820:intron 30.0%
AATTACACGCAATAACTTTC+TGG + chr2_1:28305340-28305359 None:intergenic 30.0%
TATCCATGGAGAGAATTATT+CGG + chr2_1:28305386-28305405 None:intergenic 30.0%
AGGAAAATCTGCCAAAAAAA+AGG - chr2_1:28305413-28305432 Msa0203820:intron 30.0%
!!! AAGTACATGGACCTTTTTTT+TGG + chr2_1:28305427-28305446 None:intergenic 30.0%
! TCCATGTACTTTTATCGAAA+AGG - chr2_1:28305436-28305455 Msa0203820:intron 30.0%
!! TCCTTTTCGATAAAAGTACA+TGG + chr2_1:28305440-28305459 None:intergenic 30.0%
CACTAGAACCTATAATGTTT+GGG - chr2_1:28305668-28305687 Msa0203820:intron 30.0%
ATGTGAATAGTATGTGACAA+TGG + chr2_1:28305707-28305726 None:intergenic 30.0%
TGTCACATACTATTCACATT+AGG - chr2_1:28305708-28305727 Msa0203820:intron 30.0%
GTCACATACTATTCACATTA+GGG - chr2_1:28305709-28305728 Msa0203820:intron 30.0%
TATTCACATTAGGGTATGTT+TGG - chr2_1:28305718-28305737 Msa0203820:intron 30.0%
GTGACAAGCAAATTAATGAA+GGG + chr2_1:28305982-28306001 None:intergenic 30.0%
GTAAGAGGAAAGAATGTTTA+AGG + chr2_1:28306282-28306301 None:intergenic 30.0%
GTTTAAGGAAAGAAAGTAAG+AGG + chr2_1:28306297-28306316 None:intergenic 30.0%
CAAACAAAGCCTTAAATCTA+CGG - chr2_1:28306331-28306350 Msa0203820:intron 30.0%
TTATCGAAACCGTAGATTTA+AGG + chr2_1:28306343-28306362 None:intergenic 30.0%
!!! ATTTTTTTCTCTGAATCCCA+AGG + chr2_1:28306546-28306565 None:intergenic 30.0%
AAAAAATGGGTCAGTTATTC+CGG - chr2_1:28306836-28306855 Msa0203820:intron 30.0%
CTACGTGTAGAAAAATGTTT+GGG - chr2_1:28306986-28307005 Msa0203820:CDS 30.0%
AGAAACGTACCAAACAAAAA+AGG + chr2_1:28307029-28307048 None:intergenic 30.0%
AAAGAAGAGAAAGGAATGAA+TGG + chr2_1:28307115-28307134 None:intergenic 30.0%
TGAATGAACGCAAAAAATGA+GGG + chr2_1:28307146-28307165 None:intergenic 30.0%
ATGAATGAACGCAAAAAATG+AGG + chr2_1:28307147-28307166 None:intergenic 30.0%
ACAAAGAGAAAGAAAGAGAA+GGG + chr2_1:28307192-28307211 None:intergenic 30.0%
AACAAAGAGAAAGAAAGAGA+AGG + chr2_1:28307193-28307212 None:intergenic 30.0%
! TGATCTTTAAGAGTTTAAGG+TGG + chr2_1:28307279-28307298 None:intergenic 30.0%
!! ATGGATGCATTTGATTTTAG+AGG - chr2_1:28307599-28307618 Msa0203820:intron 30.0%
!!! ATTTTTGACTTGCTAGCTTT+TGG - chr2_1:28307704-28307723 Msa0203820:CDS 30.0%
! TATTTTTCCTGCACTTTGTA+AGG - chr2_1:28307795-28307814 Msa0203820:intron 30.0%
! TTTGTAAGGCAGAGAAATTT+TGG - chr2_1:28307809-28307828 Msa0203820:intron 30.0%
!!! GAGAAATTTTGGTTCAACTA+AGG - chr2_1:28307820-28307839 Msa0203820:intron 30.0%
! TTTGGTTCAACTAAGGAATA+TGG - chr2_1:28307827-28307846 Msa0203820:intron 30.0%
!!! GTTTTAAGCTTTTGAAGCAA+TGG - chr2_1:28308039-28308058 Msa0203820:CDS 30.0%
ATTATGCATTGTATCAACTG+AGG + chr2_1:28308254-28308273 None:intergenic 30.0%
TGCATAATATATGCAAAGTC+CGG - chr2_1:28308266-28308285 Msa0203820:intron 30.0%
TGTTAAAAGGATTGAAGCAA+AGG - chr2_1:28308503-28308522 Msa0203820:CDS 30.0%
GTTAAAAGGATTGAAGCAAA+GGG - chr2_1:28308504-28308523 Msa0203820:CDS 30.0%
TTAAAAGGATTGAAGCAAAG+GGG - chr2_1:28308505-28308524 Msa0203820:CDS 30.0%
AAGAGGCAAAAACTAGTTAA+TGG - chr2_1:28308585-28308604 Msa0203820:intron 30.0%
!! GACTCTTAATGTAGTTCTAA+TGG - chr2_1:28309017-28309036 Msa0203820:CDS 30.0%
TGACAACATTAAAGACCATA+GGG + chr2_1:28309565-28309584 None:intergenic 30.0%
ATGACAACATTAAAGACCAT+AGG + chr2_1:28309566-28309585 None:intergenic 30.0%
GCTTAATGATTCTCTAATCT+AGG - chr2_1:28309799-28309818 Msa0203820:intron 30.0%
! AATCTAGGTTGTGTACATTT+TGG - chr2_1:28309814-28309833 Msa0203820:intron 30.0%
ATAGCTATCATAGTTACGTA+TGG - chr2_1:28309939-28309958 Msa0203820:intron 30.0%
TCATAGTTACGTATGGTTTA+TGG - chr2_1:28309946-28309965 Msa0203820:intron 30.0%
! GGTGAAATTTTCATCGTAAA+TGG - chr2_1:28310183-28310202 Msa0203820:intron 30.0%
TTGTGATGATAAAATCTGTG+TGG + chr2_1:28310615-28310634 None:intergenic 30.0%
AAAGAAGTTCTTCAATCTCA+GGG + chr2_1:28310939-28310958 None:intergenic 30.0%
TAAAGAAGTTCTTCAATCTC+AGG + chr2_1:28310940-28310959 None:intergenic 30.0%
TGAGCGAATTAATACAATCA+AGG + chr2_1:28311059-28311078 None:intergenic 30.0%
GATTGTATTAATTCGCTCAT+CGG - chr2_1:28311060-28311079 Msa0203820:intron 30.0%
! GTCAATATCTGAAACTTTCT+TGG - chr2_1:28311082-28311101 Msa0203820:intron 30.0%
! AATATCTGAAACTTTCTTGG+CGG - chr2_1:28311085-28311104 Msa0203820:intron 30.0%
! CAGGTTTTGCGAAATAAAAA+TGG + chr2_1:28311204-28311223 None:intergenic 30.0%
!! TTAATTTGTAGGTCTCGATT+AGG + chr2_1:28311454-28311473 None:intergenic 30.0%
ATCGAGACCTACAAATTAAA+CGG - chr2_1:28311455-28311474 Msa0203820:intron 30.0%
ATCATTGTTCATGGAAAATC+TGG - chr2_1:28311662-28311681 Msa0203820:intron 30.0%
TACCATATTGATCCTTATCA+TGG - chr2_1:28311686-28311705 Msa0203820:intron 30.0%
! TGAATTCTTTGAGAAGAGTA+AGG - chr2_1:28311733-28311752 Msa0203820:intron 30.0%
!!! ATTGTGAGTGATAATGGTTT+TGG + chr2_1:28311870-28311889 None:intergenic 30.0%
! CTTGAGTGTCATGATTATTT+TGG + chr2_1:28311978-28311997 None:intergenic 30.0%
CAAAATAATCATGACACTCA+AGG - chr2_1:28311976-28311995 Msa0203820:intron 30.0%
ATAGATTGCAACATGAACAT+CGG + chr2_1:28312176-28312195 None:intergenic 30.0%
!! TACCAATTTGCTGTACTTAA+GGG + chr2_1:28312529-28312548 None:intergenic 30.0%
!! TTACCAATTTGCTGTACTTA+AGG + chr2_1:28312530-28312549 None:intergenic 30.0%
AGTAAGTTCACCTAAACATT+TGG - chr2_1:28312886-28312905 Msa0203820:five_prime_UTR 30.0%
!!! TTTTTGGGTACCAAATGTTT+AGG + chr2_1:28312899-28312918 None:intergenic 30.0%
! AAATTGCTGTTGGTATGTTT+AGG - chr2_1:28312923-28312942 Msa0203820:five_prime_UTR 30.0%
TATGTGCCTTCAATTCAATT+TGG - chr2_1:28313052-28313071 Msa0203820:five_prime_UTR 30.0%
ATGTGCCTTCAATTCAATTT+GGG - chr2_1:28313053-28313072 Msa0203820:five_prime_UTR 30.0%
AAACACCCAAATTGAATTGA+AGG + chr2_1:28313061-28313080 None:intergenic 30.0%
! CCCCTTTTTATAGCGAAATT+TGG + chr2_1:28304527-28304546 None:intergenic 35.0%
TGTGTGAAGAGTGAAGAATT+TGG + chr2_1:28304552-28304571 None:intergenic 35.0%
TTCCCCATTTCATTTACTTG+TGG - chr2_1:28304576-28304595 Msa0203820:three_prime_UTR 35.0%
AGCCACAAGTAAATGAAATG+GGG + chr2_1:28304581-28304600 None:intergenic 35.0%
TGGAGTGACAATATTCAATG+TGG + chr2_1:28304976-28304995 None:intergenic 35.0%
TTCTTCATGAGGTTTATGGT+AGG - chr2_1:28305284-28305303 Msa0203820:intron 35.0%
CTCTCCATGGATAAAATCAA+AGG - chr2_1:28305393-28305412 Msa0203820:intron 35.0%
GCACTAGAACCTATAATGTT+TGG - chr2_1:28305667-28305686 Msa0203820:intron 35.0%
TTGGAACTGCAGAAACAATA+AGG - chr2_1:28305737-28305756 Msa0203820:intron 35.0%
AATAAGGAAAGAAAGCAGAG+AGG - chr2_1:28305753-28305772 Msa0203820:intron 35.0%
AAAACATTCTTTCCCTTGCA+TGG - chr2_1:28305792-28305811 Msa0203820:CDS 35.0%
CGTGACAAGCAAATTAATGA+AGG + chr2_1:28305983-28306002 None:intergenic 35.0%
GAAAGTGGAAAGAATGGTAA+AGG + chr2_1:28306198-28306217 None:intergenic 35.0%
GAAAGTGAATAGAAAGTGAG+TGG + chr2_1:28306256-28306275 None:intergenic 35.0%
GGAAGAGAAGAGAAAGTTTA+AGG + chr2_1:28306312-28306331 None:intergenic 35.0%
!! CGTAGATTTAAGGCTTTGTT+TGG + chr2_1:28306333-28306352 None:intergenic 35.0%
TGTCAATTAAATTGAGACGG+AGG + chr2_1:28306643-28306662 None:intergenic 35.0%
! TTGAAATGGGTCGGTTATTT+TGG - chr2_1:28306800-28306819 Msa0203820:intron 35.0%
!! TGAAATGGGTCGGTTATTTT+GGG - chr2_1:28306801-28306820 Msa0203820:intron 35.0%
AAAAATGGGTCAGTTATTCC+GGG - chr2_1:28306837-28306856 Msa0203820:intron 35.0%
GCTACGTGTAGAAAAATGTT+TGG - chr2_1:28306985-28307004 Msa0203820:CDS 35.0%
AATGGAAAAGAAAGTGGTGA+AGG + chr2_1:28307097-28307116 None:intergenic 35.0%
GGAATGAATGGAAAAGAAAG+TGG + chr2_1:28307103-28307122 None:intergenic 35.0%
GAATGAACGCAAAAAATGAG+GGG + chr2_1:28307145-28307164 None:intergenic 35.0%
! TGCGTTCATTCATTTTCTTC+AGG - chr2_1:28307154-28307173 Msa0203820:intron 35.0%
AGAAAGAGAAGGGAAAGAAA+GGG + chr2_1:28307182-28307201 None:intergenic 35.0%
AAGAAAGAGAAGGGAAAGAA+AGG + chr2_1:28307183-28307202 None:intergenic 35.0%
GATCATTGTAAAGAAACCAC+TGG - chr2_1:28307294-28307313 Msa0203820:intron 35.0%
TGTTACAAACTTTGATCCAG+TGG + chr2_1:28307313-28307332 None:intergenic 35.0%
ACAAAGAAGATCCTAGTTCA+AGG + chr2_1:28307536-28307555 None:intergenic 35.0%
TGAACTAGGATCTTCTTTGT+TGG - chr2_1:28307536-28307555 Msa0203820:CDS 35.0%
TCATTCTTTAGGTAGTTGGT+TGG - chr2_1:28307866-28307885 Msa0203820:intron 35.0%
! TGCTCACAGGATTGAAATTT+TGG - chr2_1:28308114-28308133 Msa0203820:CDS 35.0%
!! AAATTTTGGCCCTTTTGTCA+AGG - chr2_1:28308128-28308147 Msa0203820:CDS 35.0%
GCATAATATATGCAAAGTCC+GGG - chr2_1:28308267-28308286 Msa0203820:intron 35.0%
ATAAAGACTCGTGTTGAGTT+TGG - chr2_1:28308315-28308334 Msa0203820:intron 35.0%
TGTTGAGTTTGGCAAAATCA+CGG - chr2_1:28308326-28308345 Msa0203820:intron 35.0%
!! CAATTACTTGATGGTGTTGT+AGG + chr2_1:28308539-28308558 None:intergenic 35.0%
CAAACTCAGCAATTACTTGA+TGG + chr2_1:28308548-28308567 None:intergenic 35.0%
AAACTAGTTAATGGAGCCTT+TGG - chr2_1:28308594-28308613 Msa0203820:intron 35.0%
AGATCTCAAAACTTCTCCAA+AGG + chr2_1:28308613-28308632 None:intergenic 35.0%
!!! AGAAGTTTTGAGATCTACTC+AGG - chr2_1:28308617-28308636 Msa0203820:intron 35.0%
!!! TCTTTTGGTTTGTGTTGTGT+AGG - chr2_1:28308713-28308732 Msa0203820:CDS 35.0%
!! CTCTTGATTTGTTCTGCAAT+GGG - chr2_1:28308911-28308930 Msa0203820:intron 35.0%
! GCTTCACAACTATAATGGAA+AGG - chr2_1:28309202-28309221 Msa0203820:intron 35.0%
TTGGTTATTGCAGACTATGA+TGG - chr2_1:28309301-28309320 Msa0203820:intron 35.0%
TTGTGTTCAAATTCCGAGTA+GGG + chr2_1:28309413-28309432 None:intergenic 35.0%
TTTGTGTTCAAATTCCGAGT+AGG + chr2_1:28309414-28309433 None:intergenic 35.0%
GGAATTTGAACACAAATTCC+AGG - chr2_1:28309418-28309437 Msa0203820:intron 35.0%
GTATCCCAAGACATTATCTT+GGG + chr2_1:28309612-28309631 None:intergenic 35.0%
ACAAGTCACTCAATATTGAG+AGG + chr2_1:28309779-28309798 None:intergenic 35.0%
TAAATGGAACTCGAAGAATG+TGG + chr2_1:28310090-28310109 None:intergenic 35.0%
! AGTTCCATTTAGAACAGAGA+AGG - chr2_1:28310099-28310118 Msa0203820:intron 35.0%
! GTTCCATTTAGAACAGAGAA+GGG - chr2_1:28310100-28310119 Msa0203820:intron 35.0%
! ATTCCCTTCTCTGTTCTAAA+TGG + chr2_1:28310106-28310125 None:intergenic 35.0%
TTGGCAACATCCTAATGAAA+GGG + chr2_1:28310268-28310287 None:intergenic 35.0%
ATTGGCAACATCCTAATGAA+AGG + chr2_1:28310269-28310288 None:intergenic 35.0%
TCATAAATTAGGCGTAACTC+AGG - chr2_1:28310372-28310391 Msa0203820:intron 35.0%
AAGGTAGAAACTTAGGATAC+TGG + chr2_1:28310454-28310473 None:intergenic 35.0%
CAAAAAGATCGGCAGTAAAT+TGG + chr2_1:28310585-28310604 None:intergenic 35.0%
GTGGTTCATTGCAAAAAGAT+CGG + chr2_1:28310596-28310615 None:intergenic 35.0%
GCGAATTAATACAATCAAGG+AGG + chr2_1:28311056-28311075 None:intergenic 35.0%
GAAATGTCGTTAAATCAGAC+AGG + chr2_1:28311223-28311242 None:intergenic 35.0%
TCATTACAGATGTGTGTTGA+AGG - chr2_1:28311241-28311260 Msa0203820:intron 35.0%
CAAGCCAATTATCTTCACAA+TGG - chr2_1:28311271-28311290 Msa0203820:intron 35.0%
CTTGCCATTGTGAAGATAAT+TGG + chr2_1:28311278-28311297 None:intergenic 35.0%
CAATTATCTTCACAATGGCA+AGG - chr2_1:28311276-28311295 Msa0203820:intron 35.0%
!! ACATTACAGGACTTGTTGAA+TGG - chr2_1:28311315-28311334 Msa0203820:intron 35.0%
ATCCAAAGACTTAGAAGAGA+AGG - chr2_1:28311406-28311425 Msa0203820:intron 35.0%
!! GAATTGGCCGTTTAATTTGT+AGG + chr2_1:28311465-28311484 None:intergenic 35.0%
AATTAAACGGCCAATTCAGA+TGG - chr2_1:28311468-28311487 Msa0203820:intron 35.0%
CCAAAAGCTTCATAAATAGC+AGG + chr2_1:28311572-28311591 None:intergenic 35.0%
!! CCTGCTATTTATGAAGCTTT+TGG - chr2_1:28311569-28311588 Msa0203820:intron 35.0%
CCATTACAAGTTGCAAATGT+CGG + chr2_1:28311629-28311648 None:intergenic 35.0%
ACATTTGCAACTTGTAATGG+TGG - chr2_1:28311629-28311648 Msa0203820:intron 35.0%
CACCATGATAAGGATCAATA+TGG + chr2_1:28311691-28311710 None:intergenic 35.0%
TAAGGCTGATCCATCTTATT+GGG - chr2_1:28311751-28311770 Msa0203820:intron 35.0%
! GAGATTTTGTCCCAATAAGA+TGG + chr2_1:28311764-28311783 None:intergenic 35.0%
TATTGGGACAAAATCTCACA+TGG - chr2_1:28311767-28311786 Msa0203820:intron 35.0%
AATTGAATGTACGCATGTGT+CGG + chr2_1:28312096-28312115 None:intergenic 35.0%
! TTTTGGTAAGGAGAGACTAT+TGG + chr2_1:28312277-28312296 None:intergenic 35.0%
! TTTTCCTCAATAGGTACACA+TGG - chr2_1:28312394-28312413 Msa0203820:intron 35.0%
ATCTTACTCTTCAACAGCAA+GGG + chr2_1:28312712-28312731 None:intergenic 35.0%
AAAAGGGTGGCAAAGAATGA+GGG + chr2_1:28304640-28304659 None:intergenic 40.0%
TGAATGAGACAAGAAAAGGG+TGG + chr2_1:28304653-28304672 None:intergenic 40.0%
ATATATGGTCAAGCCTCATG+AGG - chr2_1:28305233-28305252 Msa0203820:intron 40.0%
TATATGGTCAAGCCTCATGA+GGG - chr2_1:28305234-28305253 Msa0203820:intron 40.0%
TGGATTAACTGCAGTGAATC+TGG + chr2_1:28305262-28305281 None:intergenic 40.0%
AGAACCTATAATGTTTGGGC+AGG - chr2_1:28305672-28305691 Msa0203820:intron 40.0%
AGTATGTGACAATGGCACAT+GGG + chr2_1:28305699-28305718 None:intergenic 40.0%
TAGTATGTGACAATGGCACA+TGG + chr2_1:28305700-28305719 None:intergenic 40.0%
AGAAAGCAGAGAGGAAAGAA+AGG - chr2_1:28305762-28305781 Msa0203820:CDS 40.0%
!! AGCAGAAAGTTTTAGCACGT+GGG + chr2_1:28305859-28305878 None:intergenic 40.0%
GTGCTAAAACTTTCTGCTCA+TGG - chr2_1:28305861-28305880 Msa0203820:CDS 40.0%
GGTGTGAAGAAAGAAGAGAA+AGG + chr2_1:28307124-28307143 None:intergenic 40.0%
!!! TTTGACTTGCTAGCTTTTGG+TGG - chr2_1:28307707-28307726 Msa0203820:CDS 40.0%
!! TTTAGGTAGTTGGTTGGTGA+GGG - chr2_1:28307872-28307891 Msa0203820:intron 40.0%
GAGATTCATCAAACCTCTCA+CGG + chr2_1:28308090-28308109 None:intergenic 40.0%
TATCAACTGAGGTAAGCTCA+CGG + chr2_1:28308243-28308262 None:intergenic 40.0%
TGAGTTTGAAGAAATCCCTG+AGG - chr2_1:28308560-28308579 Msa0203820:intron 40.0%
CTCCTTGAACTTGAGATACT+CGG + chr2_1:28308850-28308869 None:intergenic 40.0%
!! TTCAAGGAGGAACTTGTTGA+AGG - chr2_1:28308861-28308880 Msa0203820:intron 40.0%
!! GAACTTGTTGAAGGAAGGTA+AGG - chr2_1:28308870-28308889 Msa0203820:intron 40.0%
CCATTGCAGAACAAATCAAG+AGG + chr2_1:28308913-28308932 None:intergenic 40.0%
!! CCTCTTGATTTGTTCTGCAA+TGG - chr2_1:28308910-28308929 Msa0203820:intron 40.0%
TGGTAACTTTGTGCTTGAGT+TGG - chr2_1:28309037-28309056 Msa0203820:CDS 40.0%
CTGAACAAGTCGATTGGAAA+TGG - chr2_1:28309098-28309117 Msa0203820:intron 40.0%
GGAAAAGCTTAGCAGAAAGA+TGG + chr2_1:28309142-28309161 None:intergenic 40.0%
! CTTTCTGCTAAGCTTTTCCA+TGG - chr2_1:28309143-28309162 Msa0203820:intron 40.0%
GCTTCAAACTTTCTTTGCCA+TGG + chr2_1:28309163-28309182 None:intergenic 40.0%
! AGAAAGTTTGAAGCCACTGT+TGG - chr2_1:28309169-28309188 Msa0203820:intron 40.0%
CATTATAGTTGTGAAGCCTG+AGG + chr2_1:28309199-28309218 None:intergenic 40.0%
CTCAGGCTTCACAACTATAA+TGG - chr2_1:28309197-28309216 Msa0203820:intron 40.0%
! AAATTCCGAGTAGGGTGTTT+CGG + chr2_1:28309405-28309424 None:intergenic 40.0%
GAACACAAATTCCAGGATAG+TGG - chr2_1:28309425-28309444 Msa0203820:CDS 40.0%
! CAAATTCCAGGATAGTGGTT+TGG - chr2_1:28309430-28309449 Msa0203820:CDS 40.0%
ATAGAAGCTGGATCATTTCG+AGG + chr2_1:28309487-28309506 None:intergenic 40.0%
CGAAATGATCCAGCTTCTAT+TGG - chr2_1:28309487-28309506 Msa0203820:CDS 40.0%
TCTTCCAAGGAATTTCTCGA+GGG + chr2_1:28309540-28309559 None:intergenic 40.0%
TTCTTCCAAGGAATTTCTCG+AGG + chr2_1:28309541-28309560 None:intergenic 40.0%
ATTCCTTGGAAGAATCCCTA+TGG - chr2_1:28309547-28309566 Msa0203820:intron 40.0%
TTCGCCCAAGATAATGTCTT+GGG - chr2_1:28309605-28309624 Msa0203820:intron 40.0%
GGTATCCCAAGACATTATCT+TGG + chr2_1:28309613-28309632 None:intergenic 40.0%
!!! ATTTTGACTAACCTGTCCAC+CGG + chr2_1:28309642-28309661 None:intergenic 40.0%
GAACATACAATGAGAATGCG+AGG + chr2_1:28309905-28309924 None:intergenic 40.0%
TCGAAGAATGTGGCAATGTT+CGG + chr2_1:28310080-28310099 None:intergenic 40.0%
AGAAGGGAATTGTTCGCAAA+TGG - chr2_1:28310116-28310135 Msa0203820:intron 40.0%
TCACTGAAAGTCTCAAGGTA+GGG + chr2_1:28310163-28310182 None:intergenic 40.0%
TGTTGCCAATGAACTTGCAA+AGG - chr2_1:28310279-28310298 Msa0203820:intron 40.0%
CAACTCCTTTGCAAGTTCAT+TGG + chr2_1:28310287-28310306 None:intergenic 40.0%
CAATGAACTTGCAAAGGAGT+TGG - chr2_1:28310285-28310304 Msa0203820:intron 40.0%
TTTACCTTCCAGCAATCTCT+TGG + chr2_1:28310645-28310664 None:intergenic 40.0%
TCTTACAGCAAGGATACTGT+TGG - chr2_1:28310754-28310773 Msa0203820:intron 40.0%
GGTGAGACAATGTTGAACTT+TGG + chr2_1:28310853-28310872 None:intergenic 40.0%
AAGTTCAACATTGTCTCACC+CGG - chr2_1:28310853-28310872 Msa0203820:intron 40.0%
TAAATGCTCATATCAGCTCC+GGG + chr2_1:28310874-28310893 None:intergenic 40.0%
GTAAATGCTCATATCAGCTC+CGG + chr2_1:28310875-28310894 None:intergenic 40.0%
AGAACTTCTTTACAGCTCAG+TGG - chr2_1:28310948-28310967 Msa0203820:intron 40.0%
!! TGAAGATAATTGGCTTGCTG+CGG + chr2_1:28311268-28311287 None:intergenic 40.0%
GTCCTGTAATGTTCTTCACT+CGG + chr2_1:28311307-28311326 None:intergenic 40.0%
!! ACAGGACTTGTTGAATGGTA+CGG - chr2_1:28311320-28311339 Msa0203820:intron 40.0%
GCCGAGATGAAGAAAATGTA+CGG - chr2_1:28311428-28311447 Msa0203820:intron 40.0%
! GCCGTACATTTTCTTCATCT+CGG + chr2_1:28311432-28311451 None:intergenic 40.0%
GTGAGGAAATCCATCTGAAT+TGG + chr2_1:28311481-28311500 None:intergenic 40.0%
CCTCACAAATGAACCGAATT+CGG - chr2_1:28311495-28311514 Msa0203820:intron 40.0%
CAAATGAACCGAATTCGGAA+CGG - chr2_1:28311500-28311519 Msa0203820:intron 40.0%
GTTGTTGAAGCTATGACTTG+TGG - chr2_1:28311599-28311618 Msa0203820:intron 40.0%
CCGACATTTGCAACTTGTAA+TGG - chr2_1:28311626-28311645 Msa0203820:intron 40.0%
GTAAGGCTGATCCATCTTAT+TGG - chr2_1:28311750-28311769 Msa0203820:intron 40.0%
GCGGATTCATCACTATATCA+AGG + chr2_1:28312035-28312054 None:intergenic 40.0%
TAGTGATGAATCCGCAATTG+TGG - chr2_1:28312040-28312059 Msa0203820:intron 40.0%
CATGGCAGATTTATTCTGAC+AGG - chr2_1:28312412-28312431 Msa0203820:intron 40.0%
! TAAGGGCATAGAACATCTCA+AGG + chr2_1:28312512-28312531 None:intergenic 40.0%
TGCCCTTAAGTACAGCAAAT+TGG - chr2_1:28312524-28312543 Msa0203820:intron 40.0%
TCTTACTCTTCAACAGCAAG+GGG + chr2_1:28312711-28312730 None:intergenic 40.0%
GATCTTACTCTTCAACAGCA+AGG + chr2_1:28312713-28312732 None:intergenic 40.0%
CTGAAGTGTGAAGAGATTGT+GGG - chr2_1:28312737-28312756 Msa0203820:intron 40.0%
!!! GGGACTGGCTTTTTATTGTT+TGG - chr2_1:28312757-28312776 Msa0203820:intron 40.0%
GCAAAGAATGAGGGAAAGCA+AGG + chr2_1:28304631-28304650 None:intergenic 45.0%
GAAAAGGGTGGCAAAGAATG+AGG + chr2_1:28304641-28304660 None:intergenic 45.0%
ATATGGTCAAGCCTCATGAG+GGG - chr2_1:28305235-28305254 Msa0203820:intron 45.0%
CCATGGAGAGAATTATTCGG+TGG + chr2_1:28305383-28305402 None:intergenic 45.0%
CCACCGAATAATTCTCTCCA+TGG - chr2_1:28305380-28305399 Msa0203820:intron 45.0%
CTCACAATGCAACCATGCAA+GGG + chr2_1:28305807-28305826 None:intergenic 45.0%
TCTCACAATGCAACCATGCA+AGG + chr2_1:28305808-28305827 None:intergenic 45.0%
!! GAGCAGAAAGTTTTAGCACG+TGG + chr2_1:28305860-28305879 None:intergenic 45.0%
TCATGGCAGCGAAGAAAGTT+GGG - chr2_1:28305878-28305897 Msa0203820:CDS 45.0%
AAATATTACTCCCTCCGTCC+CGG + chr2_1:28306858-28306877 None:intergenic 45.0%
TTCTCTGCCTTACAAAGTGC+AGG + chr2_1:28307805-28307824 None:intergenic 45.0%
! CTTTAGGTAGTTGGTTGGTG+AGG - chr2_1:28307871-28307890 Msa0203820:intron 45.0%
TCTCACGGAGAGAAGTTGAA+CGG + chr2_1:28308075-28308094 None:intergenic 45.0%
ATGAATCTCTCACTGCTCAC+AGG - chr2_1:28308101-28308120 Msa0203820:CDS 45.0%
GAGCAGGTACCTTGACAAAA+GGG + chr2_1:28308140-28308159 None:intergenic 45.0%
TGAGCAGGTACCTTGACAAA+AGG + chr2_1:28308141-28308160 None:intergenic 45.0%
TGAGTTTGGCAAAATCACGG+TGG - chr2_1:28308329-28308348 Msa0203820:intron 45.0%
! ACAGCGCGTCACAATGATTT+TGG + chr2_1:28308403-28308422 None:intergenic 45.0%
AAGGATTGAAGCAAAGGGGA+AGG - chr2_1:28308509-28308528 Msa0203820:CDS 45.0%
AGGATTGAAGCAAAGGGGAA+GGG - chr2_1:28308510-28308529 Msa0203820:CDS 45.0%
AAGAAATCCCTGAGGAGAAG+AGG - chr2_1:28308568-28308587 Msa0203820:intron 45.0%
! GTTTTTGCCTCTTCTCCTCA+GGG + chr2_1:28308578-28308597 None:intergenic 45.0%
! AGTTTTTGCCTCTTCTCCTC+AGG + chr2_1:28308579-28308598 None:intergenic 45.0%
ACAGCAAGAGCAACAAATGG+TGG + chr2_1:28308753-28308772 None:intergenic 45.0%
CGAACAGCAAGAGCAACAAA+TGG + chr2_1:28308756-28308775 None:intergenic 45.0%
CACGAAGTTCATCGACAACA+AGG + chr2_1:28308824-28308843 None:intergenic 45.0%
TGCCGAGTATCTCAAGTTCA+AGG - chr2_1:28308845-28308864 Msa0203820:intron 45.0%
CGAGTATCTCAAGTTCAAGG+AGG - chr2_1:28308848-28308867 Msa0203820:intron 45.0%
!! AGGAGGAACTTGTTGAAGGA+AGG - chr2_1:28308865-28308884 Msa0203820:intron 45.0%
!! CCAATCGACTTGTTCAGAGT+TGG + chr2_1:28309095-28309114 None:intergenic 45.0%
CCAACTCTGAACAAGTCGAT+TGG - chr2_1:28309092-28309111 Msa0203820:intron 45.0%
TAGCAGAAAGATGGCGATTG+AGG + chr2_1:28309133-28309152 None:intergenic 45.0%
! AATTCCGAGTAGGGTGTTTC+GGG + chr2_1:28309404-28309423 None:intergenic 45.0%
CGAGAAGATCCAATAGAAGC+TGG + chr2_1:28309499-28309518 None:intergenic 45.0%
GCTTCTATTGGATCTTCTCG+AGG - chr2_1:28309499-28309518 Msa0203820:exon 45.0%
AGGAATTTCTCGAGGGTGAA+AGG + chr2_1:28309533-28309552 None:intergenic 45.0%
TTCACCCTCGAGAAATTCCT+TGG - chr2_1:28309533-28309552 Msa0203820:intron 45.0%
AGACCATAGGGATTCTTCCA+AGG + chr2_1:28309553-28309572 None:intergenic 45.0%
GTTGTCATCCTTTCTCCACA+TGG - chr2_1:28309578-28309597 Msa0203820:intron 45.0%
CGAAGTAACCATGTGGAGAA+AGG + chr2_1:28309589-28309608 None:intergenic 45.0%
CTTCGCCCAAGATAATGTCT+TGG - chr2_1:28309604-28309623 Msa0203820:intron 45.0%
CTCAGACGTATCAAGCAACA+AGG - chr2_1:28309866-28309885 Msa0203820:intron 45.0%
ACGTATCAAGCAACAAGGCT+TGG - chr2_1:28309871-28309890 Msa0203820:intron 45.0%
ATGTAGTTCCCACTGCATCA+GGG + chr2_1:28310027-28310046 None:intergenic 45.0%
GGATCTCAAGATTCGAAGTC+TGG - chr2_1:28310137-28310156 Msa0203820:intron 45.0%
CTCACTGAAAGTCTCAAGGT+AGG + chr2_1:28310164-28310183 None:intergenic 45.0%
CTACCTTGAGACTTTCAGTG+AGG - chr2_1:28310162-28310181 Msa0203820:intron 45.0%
TCACCTCACTGAAAGTCTCA+AGG + chr2_1:28310168-28310187 None:intergenic 45.0%
GAACTTGCAAAGGAGTTGGA+AGG - chr2_1:28310289-28310308 Msa0203820:intron 45.0%
GGAAAACCTGATCTGATCGT+CGG - chr2_1:28310310-28310329 Msa0203820:intron 45.0%
TAGTTTCCGACGATCAGATC+AGG + chr2_1:28310319-28310338 None:intergenic 45.0%
ATCGTCGGAAACTACAGTGA+CGG - chr2_1:28310325-28310344 Msa0203820:intron 45.0%
CTGCGATTGGCGTTAAAACA+AGG + chr2_1:28310473-28310492 None:intergenic 45.0%
GAGCAATAGTACACTGCGAT+TGG + chr2_1:28310486-28310505 None:intergenic 45.0%
TCCAGTAAAGCTCAGACTCT+GGG + chr2_1:28310531-28310550 None:intergenic 45.0%
TTCCAGTAAAGCTCAGACTC+TGG + chr2_1:28310532-28310551 None:intergenic 45.0%
AGTACCTTCCAAGAGATTGC+TGG - chr2_1:28310634-28310653 Msa0203820:intron 45.0%
GACTTTGTGCTCTTACAGCA+AGG - chr2_1:28310744-28310763 Msa0203820:intron 45.0%
TACGCTCAGTCTCAGTGTAT+GGG + chr2_1:28310900-28310919 None:intergenic 45.0%
GAAGTTCTTCAATCTCAGGG+TGG + chr2_1:28310936-28310955 None:intergenic 45.0%
TTACAGCTCAGTGGAGAATG+AGG - chr2_1:28310957-28310976 Msa0203820:intron 45.0%
TATCTTCACAATGGCAAGGC+TGG - chr2_1:28311280-28311299 Msa0203820:intron 45.0%
GACCGAGTGAAGAACATTAC+AGG - chr2_1:28311302-28311321 Msa0203820:intron 45.0%
GGCCTTCTCTTCTAAGTCTT+TGG + chr2_1:28311411-28311430 None:intergenic 45.0%
CCGAATTCGGTTCATTTGTG+AGG + chr2_1:28311498-28311517 None:intergenic 45.0%
AAAGCTCTCCGTTCCGAATT+CGG + chr2_1:28311511-28311530 None:intergenic 45.0%
CCTTTGTGTCGCAAATGACA+CGG + chr2_1:28311535-28311554 None:intergenic 45.0%
!! CGTGTCATTTGCGACACAAA+GGG - chr2_1:28311533-28311552 Msa0203820:intron 45.0%
CCATGAACAATGATCTCAGC+AGG + chr2_1:28311656-28311675 None:intergenic 45.0%
CCTGCTGAGATCATTGTTCA+TGG - chr2_1:28311653-28311672 Msa0203820:intron 45.0%
TGGGACAAAATCTCACATGG+AGG - chr2_1:28311770-28311789 Msa0203820:intron 45.0%
TTGCAACACGACCACAATTG+CGG + chr2_1:28312054-28312073 None:intergenic 45.0%
TCTGCCATGTGTACCTATTG+AGG + chr2_1:28312401-28312420 None:intergenic 45.0%
TTGACCCTAACTGGTGTCTA+TGG - chr2_1:28312438-28312457 Msa0203820:intron 45.0%
GAAGCCATAGACACCAGTTA+GGG + chr2_1:28312445-28312464 None:intergenic 45.0%
AGAAGCCATAGACACCAGTT+AGG + chr2_1:28312446-28312465 None:intergenic 45.0%
TAACTGGTGTCTATGGCTTC+TGG - chr2_1:28312445-28312464 Msa0203820:intron 45.0%
GCTGAAGTGTGAAGAGATTG+TGG - chr2_1:28312736-28312755 Msa0203820:intron 45.0%
!!! CTAATAATAAATTTTATTTA+CGG + chr2_1:28306063-28306082 None:intergenic 5.0%
!!! TAATTAAAATAATGTTATTT+TGG - chr2_1:28307740-28307759 Msa0203820:intron 5.0%
GGGACCTGCCCAAACATTAT+AGG + chr2_1:28305679-28305698 None:intergenic 50.0%
CTCATGGCAGCGAAGAAAGT+TGG - chr2_1:28305877-28305896 Msa0203820:CDS 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - chr2_1:28306841-28306860 Msa0203820:intron 50.0%
! GCTTGTAACAGTAGCCTTGC+TGG - chr2_1:28307510-28307529 Msa0203820:CDS 50.0%
ATCCTAGTTCAAGGCCAGCA+AGG + chr2_1:28307527-28307546 None:intergenic 50.0%
CTCACGGAGAGAAGTTGAAC+GGG + chr2_1:28308074-28308093 None:intergenic 50.0%
GTTCAACTTCTCTCCGTGAG+AGG - chr2_1:28308074-28308093 Msa0203820:CDS 50.0%
! TGATGTTTGGGGTTCGAACC+CGG + chr2_1:28308288-28308307 None:intergenic 50.0%
!! TTGCTCTTGCTGTTCGTCCA+AGG - chr2_1:28308760-28308779 Msa0203820:CDS 50.0%
CTCAGATACTCCCAAACACC+AGG + chr2_1:28308786-28308805 None:intergenic 50.0%
CGAGGAAAAGACGCGTTGAA+TGG + chr2_1:28309071-28309090 None:intergenic 50.0%
! GACTTGTTCAGAGTTGGTCG+AGG + chr2_1:28309089-28309108 None:intergenic 50.0%
AGCCACTGTTGGAATTCCTC+AGG - chr2_1:28309180-28309199 Msa0203820:intron 50.0%
AGCCTGAGGAATTCCAACAG+TGG + chr2_1:28309185-28309204 None:intergenic 50.0%
CTCTCTCCAAACCACTATCC+TGG + chr2_1:28309439-28309458 None:intergenic 50.0%
! CAGGATAGTGGTTTGGAGAG+AGG - chr2_1:28309437-28309456 Msa0203820:CDS 50.0%
! ATAGTGGTTTGGAGAGAGGC+TGG - chr2_1:28309441-28309460 Msa0203820:CDS 50.0%
! TAGTGGTTTGGAGAGAGGCT+GGG - chr2_1:28309442-28309461 Msa0203820:CDS 50.0%
GATCATTTCGAGGACACGCT+CGG + chr2_1:28309477-28309496 None:intergenic 50.0%
TTCTCGAGGGTGAAAGGATC+AGG + chr2_1:28309527-28309546 None:intergenic 50.0%
TCTTGGGCGAAGTAACCATG+TGG + chr2_1:28309596-28309615 None:intergenic 50.0%
GTCTTGGGATACCCTGATAC+CGG - chr2_1:28309620-28309639 Msa0203820:intron 50.0%
TAACCTGTCCACCGGTATCA+GGG + chr2_1:28309634-28309653 None:intergenic 50.0%
TCTGAGCATCTCGTTCTCCA+AGG + chr2_1:28309852-28309871 None:intergenic 50.0%
CATGTAGTTCCCACTGCATC+AGG + chr2_1:28310028-28310047 None:intergenic 50.0%
GATGCAGTGGGAACTACATG+TGG - chr2_1:28310028-28310047 Msa0203820:intron 50.0%
AAGCTCAGACTCTGGGTACT+TGG + chr2_1:28310524-28310543 None:intergenic 50.0%
ACCCAGAGTCTGAGCTTTAC+TGG - chr2_1:28310527-28310546 Msa0203820:intron 50.0%
CCTTCCAGCAATCTCTTGGA+AGG + chr2_1:28310641-28310660 None:intergenic 50.0%
CCTTCCAAGAGATTGCTGGA+AGG - chr2_1:28310638-28310657 Msa0203820:intron 50.0%
GTAAAGTCCAGGAAGGGTGA+AGG + chr2_1:28310800-28310819 None:intergenic 50.0%
CACACGGTAAAGTCCAGGAA+GGG + chr2_1:28310806-28310825 None:intergenic 50.0%
TGAACCACACGGTAAAGTCC+AGG + chr2_1:28310811-28310830 None:intergenic 50.0%
GGACTTTACCGTGTGGTTCA+CGG - chr2_1:28310811-28310830 Msa0203820:intron 50.0%
CATCGATACCGTGAACCACA+CGG + chr2_1:28310822-28310841 None:intergenic 50.0%
CTACGCTCAGTCTCAGTGTA+TGG + chr2_1:28310901-28310920 None:intergenic 50.0%
!! CCGTGTCATTTGCGACACAA+AGG - chr2_1:28311532-28311551 Msa0203820:intron 50.0%
GCAGCTTGGTCACCATGATA+AGG + chr2_1:28311701-28311720 None:intergenic 50.0%
! GACAGGCTTTTGACCCTAAC+TGG - chr2_1:28312429-28312448 Msa0203820:intron 50.0%
GTTTGCTCTCACGACGATCA+AGG + chr2_1:28312485-28312504 None:intergenic 50.0%
GTGTGAAGAGATTGTGGGAC+TGG - chr2_1:28312742-28312761 Msa0203820:intron 50.0%
GTGAATCTGGTCCCCTCATG+AGG + chr2_1:28305249-28305268 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr2_1:28306845-28306864 Msa0203820:intron 55.0%
!! AGCCTTGCTGGCCTTGAACT+AGG - chr2_1:28307522-28307541 Msa0203820:CDS 55.0%
TTCGTCCAAGGCCTGGTGTT+TGG - chr2_1:28308772-28308791 Msa0203820:CDS 55.0%
TCGTCCAAGGCCTGGTGTTT+GGG - chr2_1:28308773-28308792 Msa0203820:CDS 55.0%
TACTCCCAAACACCAGGCCT+TGG + chr2_1:28308780-28308799 None:intergenic 55.0%
TGCTCCCGAAACACCCTACT+CGG - chr2_1:28309397-28309416 Msa0203820:intron 55.0%
! AGTGGTTTGGAGAGAGGCTG+GGG - chr2_1:28309443-28309462 Msa0203820:CDS 55.0%
TTGGGATACCCTGATACCGG+TGG - chr2_1:28309623-28309642 Msa0203820:intron 55.0%
ATACCCTGATACCGGTGGAC+AGG - chr2_1:28309628-28309647 Msa0203820:intron 55.0%
CTAACCTGTCCACCGGTATC+AGG + chr2_1:28309635-28309654 None:intergenic 55.0%
TTTGGACCAAGTTCGCGCCT+TGG - chr2_1:28309832-28309851 Msa0203820:intron 55.0%
CACTGCATCAGGGAGAAGAC+GGG + chr2_1:28310017-28310036 None:intergenic 55.0%
CCACTGCATCAGGGAGAAGA+CGG + chr2_1:28310018-28310037 None:intergenic 55.0%
CGTCTTCTCCCTGATGCAGT+GGG - chr2_1:28310016-28310035 Msa0203820:intron 55.0%
CCACACGGTAAAGTCCAGGA+AGG + chr2_1:28310807-28310826 None:intergenic 55.0%
CCTTCCTGGACTTTACCGTG+TGG - chr2_1:28310804-28310823 Msa0203820:intron 55.0%
CGAGGTTTACTAGCTCCCTC+AGG + chr2_1:28311358-28311377 None:intergenic 55.0%
GTAAACCTCGTCGTCGTTGC+TGG - chr2_1:28311368-28311387 Msa0203820:intron 55.0%
CAACGAGAGTCTCAGCAGCT+TGG + chr2_1:28311715-28311734 None:intergenic 55.0%
GGTCAGTTATTCCGGGACGG+AGG - chr2_1:28306844-28306863 Msa0203820:intron 60.0%
!! CTTGCTGTTCGTCCAAGGCC+TGG - chr2_1:28308765-28308784 Msa0203820:CDS 60.0%
CGTTCTCCAAGGCGCGAACT+TGG + chr2_1:28309841-28309860 None:intergenic 60.0%
CCGTCTTCTCCCTGATGCAG+TGG - chr2_1:28310015-28310034 Msa0203820:intron 60.0%
CACACTGCCTTCACCCTTCC+TGG - chr2_1:28310790-28310809 Msa0203820:intron 60.0%
ACGGCAAGAATGCTCGCCTG+AGG - chr2_1:28311339-28311358 Msa0203820:intron 60.0%
CGGCAAGAATGCTCGCCTGA+GGG - chr2_1:28311340-28311359 Msa0203820:intron 60.0%
TGTCTCCAGCAACGACGACG+AGG + chr2_1:28311376-28311395 None:intergenic 60.0%
TCGTCGTCGTTGCTGGAGAC+AGG - chr2_1:28311375-28311394 Msa0203820:intron 60.0%
TCGTCGTTGCTGGAGACAGG+AGG - chr2_1:28311378-28311397 Msa0203820:intron 60.0%
CGTTGCTGGAGACAGGAGGA+AGG - chr2_1:28311382-28311401 Msa0203820:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 28304472 28313102 28304472 ID=Msa0203820;Name=Msa0203820
chr2_1 mRNA 28304472 28313102 28304472 ID=Msa0203820-mRNA-1;Parent=Msa0203820;Name=Msa0203820-mRNA-1;_AED=0.14;_eAED=0.14;_QI=274|1|1|1|0.84|0.78|14|374|804
chr2_1 exon 28304472 28304878 28304472 ID=Msa0203820-mRNA-1:exon:10314;Parent=Msa0203820-mRNA-1
chr2_1 exon 28305029 28305167 28305029 ID=Msa0203820-mRNA-1:exon:10313;Parent=Msa0203820-mRNA-1
chr2_1 exon 28305761 28306324 28305761 ID=Msa0203820-mRNA-1:exon:10312;Parent=Msa0203820-mRNA-1
chr2_1 exon 28306588 28306812 28306588 ID=Msa0203820-mRNA-1:exon:10311;Parent=Msa0203820-mRNA-1
chr2_1 exon 28306915 28307081 28306915 ID=Msa0203820-mRNA-1:exon:10310;Parent=Msa0203820-mRNA-1
chr2_1 exon 28307181 28307297 28307181 ID=Msa0203820-mRNA-1:exon:10309;Parent=Msa0203820-mRNA-1
chr2_1 exon 28307391 28307564 28307391 ID=Msa0203820-mRNA-1:exon:10308;Parent=Msa0203820-mRNA-1
chr2_1 exon 28307658 28307753 28307658 ID=Msa0203820-mRNA-1:exon:10307;Parent=Msa0203820-mRNA-1
chr2_1 exon 28307925 28308260 28307925 ID=Msa0203820-mRNA-1:exon:10306;Parent=Msa0203820-mRNA-1
chr2_1 exon 28308351 28308543 28308351 ID=Msa0203820-mRNA-1:exon:10305;Parent=Msa0203820-mRNA-1
chr2_1 exon 28308688 28308839 28308688 ID=Msa0203820-mRNA-1:exon:10304;Parent=Msa0203820-mRNA-1
chr2_1 exon 28308936 28309062 28308936 ID=Msa0203820-mRNA-1:exon:10303;Parent=Msa0203820-mRNA-1
chr2_1 exon 28309425 28309540 28309425 ID=Msa0203820-mRNA-1:exon:10302;Parent=Msa0203820-mRNA-1
chr2_1 exon 28312853 28313102 28312853 ID=Msa0203820-mRNA-1:exon:10301;Parent=Msa0203820-mRNA-1
chr2_1 five_prime_UTR 28312853 28313102 28312853 ID=Msa0203820-mRNA-1:five_prime_utr;Parent=Msa0203820-mRNA-1
chr2_1 five_prime_UTR 28309517 28309540 28309517 ID=Msa0203820-mRNA-1:five_prime_utr;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28309425 28309516 28309425 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28308936 28309062 28308936 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28308688 28308839 28308688 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28308351 28308543 28308351 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28307925 28308260 28307925 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28307658 28307753 28307658 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28307391 28307564 28307391 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28307181 28307297 28307181 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28306915 28307081 28306915 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28306588 28306812 28306588 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28305761 28306324 28305761 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28305029 28305167 28305029 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 CDS 28304846 28304878 28304846 ID=Msa0203820-mRNA-1:cds;Parent=Msa0203820-mRNA-1
chr2_1 three_prime_UTR 28304472 28304845 28304472 ID=Msa0203820-mRNA-1:three_prime_utr;Parent=Msa0203820-mRNA-1
Gene Sequence

>Msa0203820

ATGGCAAGTCTTACCCGTTCAACTTCTCTCCGTGAGAGGTTTGATGAATCTCTCACTGCTCACAGGATTGAAATTTTGGCCCTTTTGTCAAGGATTGAAGCAAAGGGGAAGGGAATCCTACAACACCATCAAGTAATTGCTGAGTTTGAAGAAATCCCTGAGGAGAAGAGGCAAAAACTAGTTAATGGAGCCTTTGGAGAAGTTTTGAGATCTACTCAGGAAGCTGTAGTGTTGCCACCATTTGTTGCTCTTGCTGTTCGTCCAAGGCCTGGTGTTTGGGAGTATCTGAGAGTTGATGTGCACAGCCTTGTTGTCGATGAACTTCGTGCTGCCGAGTATCTCAAGTTCAAGGAGGAACTTGTTGAAGGAAGTTCTAATGGTAACTTTGTGCTTGAGTTGGACTTTGAACCATTCAACGCGTCTTTTCCTCGACCAACTCTGAACAAGTCGATTGGAAATGGCGTCGAGTTCCTCAATCGCCATCTTTCTGCTAAGCTTTTCCATGGCAAAGAAAGTTTGAAGCCACTGTTGGAATTCCTCAGGCTTCACAACTATAATGGAAAGACTATGATGGTGAATGACAGAATTCAAAATCTGAATTCTCTTCAACATGTTTTGAGAACTGCAGAAGATTATCTTCGCACAATTGCTCCCGAAACACCCTACTCGGAATTTGAACACAAATTCCAGGATAGTGGTTTGGAGAGAGGCTGGGGTGACACGGCCGAGCGTGTCCTCGAAATGATCCAGCTTCTATTGGATCTTCTCGAGGCACCTGATCCTTTCACCCTCGAGAAATTCCTTGGAAGAATCCCTATGGTCTTTAATGTTGTCATCCTTTCTCCACATGGTTACTTCGCCCAAGATAATGTCTTGGGATACCCTGATACCGGTGGACAGGTTGTGTACATTTTGGACCAAGTTCGCGCCTTGGAGAACGAGATGCTCAGACGTATCAAGCAACAAGGCTTGGATATCAAGCCTCGCATTCTCATTATCACCCGTCTTCTCCCTGATGCAGTGGGAACTACATGTGGTGAACGTCTTGAGAAAGTATACGATACCGAACATTGCCACATTCTTCGAGTTCCATTTAGAACAGAGAAGGGAATTGTTCGCAAATGGATCTCAAGATTCGAAGTCTGGCCCTACCTTGAGACTTTCAGTGAGGATGTTGCCAATGAACTTGCAAAGGAGTTGGAAGGAAAACCTGATCTGATCGTCGGAAACTACAGTGACGGAAACATCGTTGCCTCTTTGTTAGCTCATAAATTAGGCGTAACTCAGTGTACTATTGCTCATGCACTCGAGAAGACCAAGTACCCAGAGTCTGAGCTTTACTGGAAAAAATTTGAAGACAAGTATCACTTCTCATGCCAATTTACTGCCGATCTTTTTGCAATGAACCACACAGATTTTATCATCACAAGTACCTTCCAAGAGATTGCTGGAAGCAAGGATACTGTTGGACAGTATGAGAGTCACACTGCCTTCACCCTTCCTGGACTTTACCGTGTGGTTCACGGTATCGATGTCTTTGATCCAAAGTTCAACATTGTCTCACCCGGAGCTGATATGAGCATTTACTTCCCATACACTGAGACTGAGCGTAGATTGACATCATTCCACCCTGAGATTGAAGAACTTCTTTACAGCTCAGTGGAGAATGAGGAGCACATATGTGTGTTGAAGGACCGCAGCAAGCCAATTATCTTCACAATGGCAAGGCTGGACCGAGTGAAGAACATTACAGGACTTGTTGAATGGTACGGCAAGAATGCTCGCCTGAGGGAGCTAGTAAACCTCGTCGTCGTTGCTGGAGACAGGAGGAAGGAATCCAAAGACTTAGAAGAGAAGGCCGAGATGAAGAAAATGTACGGCCTAATCGAGACCTACAAATTAAACGGCCAATTCAGATGGATTTCCTCACAAATGAACCGAATTCGGAACGGAGAGCTTTACCGTGTCATTTGCGACACAAAGGGAGCTTTTGTGCAGCCTGCTATTTATGAAGCTTTTGGTTTGACTGTTGTTGAAGCTATGACTTGTGGATTGCCGACATTTGCAACTTGTAATGGTGGTCCTGCTGAGATCATTGTTCATGGAAAATCTGGTTACCATATTGATCCTTATCATGGTGACCAAGCTGCTGAGACTCTCGTTGAATTCTTTGAGAAGAGTAAGGCTGATCCATCTTATTGGGACAAAATCTCACATGGAGGTCTCAAACGTATTCATGAGAAGTACACATGGCAGATTTATTCTGACAGGCTTTTGACCCTAACTGGTGTCTATGGCTTCTGGAAGCATGTGACAAACCTTGATCGTCGTGAGAGCAAACGTTACCTTGAGATGTTCTATGCCCTTAAGTACAGCAAATTGGCTGAATCTGTGCCCCTTGCTGTTGAAGAGTAA
Protein sequence

>Msa0203820

MASLTRSTSLRERFDESLTAHRIEILALLSRIEAKGKGILQHHQVIAEFEEIPEEKRQKLVNGAFGEVLRSTQEAVVLPPFVALAVRPRPGVWEYLRVDVHSLVVDELRAAEYLKFKEELVEGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHGKESLKPLLEFLRLHNYNGKTMMVNDRIQNLNSLQHVLRTAEDYLRTIAPETPYSEFEHKFQDSGLERGWGDTAERVLEMIQLLLDLLEAPDPFTLEKFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLRRIKQQGLDIKPRILIITRLLPDAVGTTCGERLEKVYDTEHCHILRVPFRTEKGIVRKWISRFEVWPYLETFSEDVANELAKELEGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESELYWKKFEDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTETERRLTSFHPEIEELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRIRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGYHIDPYHGDQAAETLVEFFEKSKADPSYWDKISHGGLKRIHEKYTWQIYSDRLLTLTGVYGFWKHVTNLDRRESKRYLEMFYALKYSKLAESVPLAVEE*