AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0424240


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0424240 MtrunA17_Chr3g0125961 98.295 352 6 0 1 352 1 352 0.0 721
Msa0424240 MtrunA17_Chr3g0125911 98.864 352 4 0 1 352 1 352 0.0 721
Msa0424240 MtrunA17_Chr3g0125941 97.734 353 7 1 1 352 1 353 0.0 707
Msa0424240 MtrunA17_Chr7g0262421 59.829 351 141 0 2 352 3 353 2.18e-158 449
Msa0424240 MtrunA17_Chr1g0183131 58.166 349 146 0 4 352 3 351 7.81e-154 437
Msa0424240 MtrunA17_Chr6g0478081 50.278 360 174 3 2 360 3 358 7.95e-130 377
Msa0424240 MtrunA17_Chr7g0242291 49.020 357 176 5 1 352 12 367 2.16e-114 338
Msa0424240 MtrunA17_Chr5g0440521 44.258 357 196 3 7 360 16 372 2.18e-108 322
Msa0424240 MtrunA17_Chr3g0132351 48.066 362 181 5 5 360 12 372 5.92e-106 316
Msa0424240 MtrunA17_Chr3g0118441 42.179 358 204 3 6 360 10 367 3.40e-98 296
Msa0424240 MtrunA17_Chr7g0242301 43.402 341 155 6 25 360 1 308 6.89e-89 270
Msa0424240 MtrunA17_Chr4g0021211 40.401 349 198 5 7 352 31 372 1.45e-82 256
Msa0424240 MtrunA17_Chr5g0419681 38.983 354 208 6 1 352 1 348 1.17e-78 246
Msa0424240 MtrunA17_Chr3g0118431 41.065 263 152 3 101 360 19 281 1.45e-64 207
Msa0424240 MtrunA17_Chr8g0385221 31.445 353 220 14 12 352 55 397 5.29e-41 149
Msa0424240 MtrunA17_Chr6g0474141 24.930 357 217 13 16 357 19 339 9.48e-19 86.7
Msa0424240 MtrunA17_Chr5g0411801 24.128 344 225 13 12 346 43 359 4.51e-12 67.0
Msa0424240 MtrunA17_Chr4g0064291 25.407 307 199 7 37 339 39 319 5.80e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0424240 AT1G77120.1 83.714 350 57 0 3 352 2 351 0.0 620
Msa0424240 AT5G43940.1 59.599 349 141 0 4 352 3 351 4.66e-157 446
Msa0424240 AT5G43940.2 57.341 361 142 1 4 352 3 363 8.99e-153 436
Msa0424240 AT5G24760.1 51.397 358 169 3 7 363 12 365 1.37e-135 392
Msa0424240 AT1G64710.1 50.559 358 171 3 3 354 2 359 3.75e-131 380
Msa0424240 AT1G32780.1 50.136 369 173 3 1 358 1 369 1.08e-130 380
Msa0424240 AT5G24760.2 50.000 340 165 3 25 363 1 336 2.25e-124 362
Msa0424240 AT5G24760.3 50.000 340 165 3 25 363 1 336 2.25e-124 362
Msa0424240 AT1G64710.2 49.405 336 164 3 25 354 1 336 1.57e-119 350
Msa0424240 AT5G42250.1 46.398 347 183 3 9 352 17 363 1.09e-107 321
Msa0424240 AT1G22440.1 47.554 368 179 7 2 360 5 367 2.41e-106 317
Msa0424240 AT1G22430.2 45.879 364 193 4 1 360 6 369 7.59e-105 314
Msa0424240 AT1G22430.1 45.879 364 193 4 1 360 6 369 7.59e-105 314
Msa0424240 AT4G22110.2 45.856 362 186 5 6 360 12 370 9.77e-101 303
Msa0424240 AT4G22110.1 45.856 362 186 5 6 360 12 370 9.77e-101 303
Msa0424240 AT1G64710.3 48.421 285 142 2 75 354 6 290 5.21e-97 291
Msa0424240 AT1G22430.3 50.350 286 139 3 1 283 6 291 4.97e-90 273
Msa0424240 AT1G22430.4 51.807 249 118 2 1 247 6 254 1.24e-81 251
Msa0424240 AT1G22430.5 51.807 249 118 2 1 247 6 254 1.24e-81 251
Msa0424240 AT5G24760.4 45.635 252 135 2 113 363 1 251 5.25e-81 248
Msa0424240 AT4G22110.3 52.033 246 110 3 6 246 12 254 2.36e-77 239
Msa0424240 AT5G63620.1 30.387 362 229 14 12 360 57 408 2.13e-37 139
Msa0424240 AT5G63620.2 29.722 360 234 12 12 360 57 408 6.50e-37 138
Msa0424240 AT5G63620.3 30.120 249 161 7 12 251 57 301 1.52e-28 113
Msa0424240 AT5G51970.1 23.592 373 232 14 1 357 6 341 2.60e-15 77.0
Msa0424240 AT5G51970.2 23.592 373 232 14 1 357 6 341 2.60e-15 77.0
Msa0424240 AT1G72680.1 26.962 293 187 7 37 327 37 304 1.08e-13 72.0
Msa0424240 AT4G37990.1 24.444 315 207 8 37 346 35 323 2.08e-12 68.2

Find 131 sgRNAs with CRISPR-Local

Find 502 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTCATCTGTTGCTATCTT+TGG 0.236969 3_2:+74447017 Msa0424240:CDS
ACGGGTTTGTCATGATCTTT+TGG 0.242014 3_2:-74447348 None:intergenic
GTCATACTGATGTTTACTTC+TGG 0.242164 3_2:+74445565 Msa0424240:CDS
GCTTTGTTAATCTCTGAAAA+TGG 0.242441 3_2:-74447986 None:intergenic
GTTTCTAGCCGATTTGAATT+AGG 0.268437 3_2:+74447204 Msa0424240:CDS
TGGTCTCAGCTAAGAAGTTT+GGG 0.291376 3_2:+74447307 Msa0424240:intron
CTTTCATTCAACAAATTCAT+AGG 0.292860 3_2:-74447741 None:intergenic
GGGTTTGTAGTTACCATAAA+AGG 0.296012 3_2:-74447778 None:intergenic
TTGGTCTCAGCTAAGAAGTT+TGG 0.297490 3_2:+74447306 Msa0424240:intron
TCAGTCAAGATTCTCTATTA+AGG 0.310729 3_2:+74446451 Msa0424240:CDS
GCAACATGTGTGATCTTCTT+AGG 0.311495 3_2:+74446393 Msa0424240:CDS
TGGGGTGTTGCTGTACTTGT+TGG 0.336473 3_2:+74447684 Msa0424240:CDS
ATGTACTTCTCTACAACATT+AGG 0.344846 3_2:-74447813 None:intergenic
TTGAATGCATCATCTTTGTT+TGG 0.346611 3_2:-74447711 None:intergenic
GCTGAAGGAGCAAGGATATC+TGG 0.347450 3_2:+74447153 Msa0424240:CDS
GTTGAATGAAAGGACTCTTA+AGG 0.347627 3_2:+74447752 Msa0424240:CDS
ATCTTTGGACTTGGAGCTGT+TGG 0.351212 3_2:+74447032 Msa0424240:CDS
ACTTTGTCAAGTGGTGCATC+AGG 0.352356 3_2:-74446557 None:intergenic
CTATGTTCTTGTTCTCAATC+TGG 0.372638 3_2:+74448109 Msa0424240:three_prime_UTR
TTGAATGAAAGGACTCTTAA+GGG 0.375052 3_2:+74447753 Msa0424240:CDS
GCAACAGATGAACCGGGTTT+CGG 0.376365 3_2:-74447008 None:intergenic
TATCTGCAGCTGCGGTTGCA+TGG 0.381586 3_2:+74445451 Msa0424240:intron
GCTGCGGTTGCATGGGAGGC+GGG 0.386440 3_2:+74445459 Msa0424240:intron
TCATACTGATGTTTACTTCT+GGG 0.391708 3_2:+74445566 Msa0424240:CDS
GGCGGGGAAGCCGCTGGTGA+TGG 0.393519 3_2:+74445476 Msa0424240:CDS
TGTTGAACTAACCTGTTGTA+CGG 0.403420 3_2:-74447367 None:intergenic
GACTCTTTGTGAAGTTTGAT+TGG 0.410028 3_2:+74448189 Msa0424240:three_prime_UTR
AGCTGCGGTTGCATGGGAGG+CGG 0.413137 3_2:+74445458 Msa0424240:intron
CTGTTGAAGGAGTCCCTACT+AGG 0.415464 3_2:+74448083 Msa0424240:three_prime_UTR
AAAGATAGCAACAGATGAAC+CGG 0.416086 3_2:-74447015 None:intergenic
TCTGTTGCTATCTTTGGACT+TGG 0.419387 3_2:+74447023 Msa0424240:CDS
ACAAATTCAATAATCAGAAA+TGG 0.420697 3_2:-74448166 None:intergenic
CATTATATTCATCATATACT+AGG 0.425714 3_2:-74448232 None:intergenic
CAGTCAAGATTCTCTATTAA+GGG 0.430904 3_2:+74446452 Msa0424240:CDS
TCATGACAAACCCGTACAAC+AGG 0.433809 3_2:+74447356 Msa0424240:CDS
GATCGTGCTGTTGAATGTAC+TGG 0.436537 3_2:+74447526 Msa0424240:CDS
ATCTGCAGCTGCGGTTGCAT+GGG 0.438978 3_2:+74445452 Msa0424240:intron
TCTAGCTAGAACACTGTTGA+AGG 0.447431 3_2:+74448070 Msa0424240:three_prime_UTR
TTGTAGAGAAGTACATGAAA+GGG 0.451043 3_2:+74447820 Msa0424240:CDS
TCTGGTGCATCAAGAATCAT+TGG 0.451804 3_2:+74447171 Msa0424240:CDS
CAAGAACATAGTCCCCTAGT+AGG 0.461232 3_2:-74448097 None:intergenic
GTAATTGCTGAAATGACAAA+TGG 0.467912 3_2:+74447496 Msa0424240:CDS
TTTCGGCTTAGCAACATTGA+TGG 0.472708 3_2:-74446991 None:intergenic
CCACACTCCCCTGTGAATAC+AGG 0.474104 3_2:-74446341 None:intergenic
CCTGTATTCACAGGGGAGTG+TGG 0.474817 3_2:+74446341 Msa0424240:CDS
CATGCCCTGCCTGTATTCAC+AGG 0.480140 3_2:+74446332 Msa0424240:CDS
GCCGCTGGTGATGGAGGAAG+TGG 0.480972 3_2:+74445485 Msa0424240:CDS
ACAGGCAGGGCATGATCCCC+TGG 0.483648 3_2:-74446323 None:intergenic
CTGTATTCACAGGGGAGTGT+GGG 0.483700 3_2:+74446342 Msa0424240:CDS
TTCTTAGGATCAACACTGAC+AGG 0.485136 3_2:+74446408 Msa0424240:CDS
TGCAGCTGCGGTTGCATGGG+AGG 0.488595 3_2:+74445455 Msa0424240:intron
ATGGGAGGCGGGGAAGCCGC+TGG 0.490732 3_2:+74445470 Msa0424240:CDS
CTATGAATTTGTTGAATGAA+AGG 0.494743 3_2:+74447742 Msa0424240:CDS
TGATTATGAGTGAGTTGAGT+GGG 0.497621 3_2:-74445223 None:intergenic
TATGTCGAACACTGTTGGTC+AGG 0.503188 3_2:+74445262 Msa0424240:exon
CATTCGGATGATGCATCTGA+TGG 0.504913 3_2:-74448035 None:intergenic
ACATTCGAAAGCTGAGATCA+TGG 0.510392 3_2:-74447560 None:intergenic
GCTGTACTCGACATGACTTA+AGG 0.513986 3_2:-74444347 None:intergenic
TTTCATTCAACAAATTCATA+GGG 0.514951 3_2:-74447740 None:intergenic
TAAGTCATGTCGAGTACAGC+TGG 0.515258 3_2:+74444350 Msa0424240:five_prime_UTR
GTTGAACTAACCTGTTGTAC+GGG 0.516621 3_2:-74447366 None:intergenic
AACATTAGGAAGATCAGTGC+GGG 0.517924 3_2:-74447799 None:intergenic
TCGTGTGTCCTTGTCGTTGT+GGG 0.521473 3_2:-74444247 None:intergenic
TACAAATTTCAGGCTGCTGA+AGG 0.521714 3_2:+74447138 Msa0424240:intron
GCATTGTACCTAATTCAAAT+CGG 0.523873 3_2:-74447212 None:intergenic
TGAAGGTCACTGACAGTAGT+TGG 0.527058 3_2:+74445197 Msa0424240:intron
CTGCGGTTGCATGGGAGGCG+GGG 0.533283 3_2:+74445460 Msa0424240:CDS
GGTGATGGAGGAAGTGGAGG+TGG 0.533501 3_2:+74445491 Msa0424240:CDS
GGGGAAGCCGCTGGTGATGG+AGG 0.533706 3_2:+74445479 Msa0424240:CDS
GTTGTAGAGAAGTACATGAA+AGG 0.537144 3_2:+74447819 Msa0424240:CDS
GAATATACTGTTGTTCATGC+TGG 0.538058 3_2:+74446515 Msa0424240:CDS
CTCAGCTGTGGAATATGCAC+AGG 0.542001 3_2:+74446587 Msa0424240:CDS
TGTTTACTTCTGGGAAGCTA+AGG 0.543162 3_2:+74445575 Msa0424240:CDS
AGACGGACTTCACCGGCTTG+TGG 0.546092 3_2:-74445519 None:intergenic
GTAAACATCAGTATGACAAA+GGG 0.554993 3_2:-74445559 None:intergenic
TGTTGAAGGAGTCCCTACTA+GGG 0.557314 3_2:+74448084 Msa0424240:three_prime_UTR
GTGCCGACGAAATGATGAAT+GGG 0.557629 3_2:-74446479 None:intergenic
AAAGTTTGTATTCTCAGCTG+TGG 0.560671 3_2:+74446575 Msa0424240:CDS
TATCTTGAGACGGACTTCAC+CGG 0.564597 3_2:-74445526 None:intergenic
TTAACTATGTCGAACACTGT+TGG 0.569566 3_2:+74445257 Msa0424240:exon
AGTAAACATCAGTATGACAA+AGG 0.570922 3_2:-74445560 None:intergenic
TGTGCCGACGAAATGATGAA+TGG 0.574064 3_2:-74446480 None:intergenic
CGAAAGCTGAGATCATGGCC+TGG 0.579058 3_2:-74447555 None:intergenic
ACTCCCCTGTGAATACAGGC+AGG 0.579461 3_2:-74446337 None:intergenic
CATGATGTTGATCAGGATTG+TGG 0.581178 3_2:+74446268 Msa0424240:intron
TTCAGGCTGCTGAAGGAGCA+AGG 0.586031 3_2:+74447145 Msa0424240:intron
CATCAGATGCATCATCCGAA+TGG 0.586918 3_2:+74448036 Msa0424240:three_prime_UTR
AAGAACATAGTCCCCTAGTA+GGG 0.588537 3_2:-74448096 None:intergenic
ATCGTGTGTCCTTGTCGTTG+TGG 0.589646 3_2:-74444248 None:intergenic
CAGCCCATTCATCATTTCGT+CGG 0.590024 3_2:+74446476 Msa0424240:CDS
TGTATTCACAGGGGAGTGTG+GGG 0.591767 3_2:+74446343 Msa0424240:CDS
CTTTGTCAAGTGGTGCATCA+GGG 0.593942 3_2:-74446556 None:intergenic
GATTGTGGAGAGCGTAGGCG+AGG 0.594735 3_2:+74446283 Msa0424240:CDS
AGAATACAAACTTTGTCAAG+TGG 0.596408 3_2:-74446566 None:intergenic
TGAATGTACTGGGAGCATCC+AGG 0.596660 3_2:+74447537 Msa0424240:CDS
GAGGTGGCGCCACCACAAGC+CGG 0.599089 3_2:+74445507 Msa0424240:CDS
GGTCAAGTCATCAAATGCAT+AGG 0.602436 3_2:+74444371 Msa0424240:five_prime_UTR
AATGTTGCTAAGCCGAAACC+CGG 0.606869 3_2:+74446996 Msa0424240:CDS
ATCGTGCTGTTGAATGTACT+GGG 0.609310 3_2:+74447527 Msa0424240:CDS
GTGTGACACATCTAAAACCA+GGG 0.609545 3_2:+74446306 Msa0424240:CDS
CGGACTTCACCGGCTTGTGG+TGG 0.618100 3_2:-74445516 None:intergenic
CTGTCCACATTGTAAGTCAG+AGG 0.618115 3_2:+74446367 Msa0424240:CDS
CAGATGCATCATCCGAATGG+AGG 0.625117 3_2:+74448039 Msa0424240:three_prime_UTR
TGTAGAGAAGTACATGAAAG+GGG 0.626357 3_2:+74447821 Msa0424240:CDS
AACATCAGTATGACAAAGGG+AGG 0.627239 3_2:-74445556 None:intergenic
GCTGGTGATGGAGGAAGTGG+AGG 0.628022 3_2:+74445488 Msa0424240:CDS
GGTGTGACACATCTAAAACC+AGG 0.629311 3_2:+74446305 Msa0424240:CDS
TGTTCTTGTTCTCAATCTGG+CGG 0.630642 3_2:+74448112 Msa0424240:three_prime_UTR
CTCTCCTCTGACTTACAATG+TGG 0.634714 3_2:-74446371 None:intergenic
ATTGGAGAGAGTGTGACACT+TGG 0.635834 3_2:+74448207 Msa0424240:three_prime_UTR
ATGCCCTGCCTGTATTCACA+GGG 0.640094 3_2:+74446333 Msa0424240:CDS
GGTCTCAGCTAAGAAGTTTG+GGG 0.642019 3_2:+74447308 Msa0424240:intron
AGGTGAAGAGTATCTTGAGA+CGG 0.642729 3_2:-74445536 None:intergenic
ATCAGGATTGTGGAGAGCGT+AGG 0.642832 3_2:+74446278 Msa0424240:intron
TCTTAGGATCAACACTGACA+GGG 0.645688 3_2:+74446409 Msa0424240:CDS
AATAAACTCCCACAACGACA+AGG 0.658527 3_2:+74444239 None:intergenic
GATTATGAGTGAGTTGAGTG+GGG 0.661865 3_2:-74445222 None:intergenic
ATTGTGGAGAGCGTAGGCGA+GGG 0.662603 3_2:+74446284 Msa0424240:CDS
AAGATAGCAACAGATGAACC+GGG 0.667433 3_2:-74447014 None:intergenic
ATGATTATGAGTGAGTTGAG+TGG 0.669238 3_2:-74445224 None:intergenic
ATTGCTGAAATGACAAATGG+AGG 0.669847 3_2:+74447499 Msa0424240:CDS
CTCCCCTGTGAATACAGGCA+GGG 0.674123 3_2:-74446336 None:intergenic
GGTCAGGTCATCAAGTGCAG+AGG 0.674142 3_2:+74445278 Msa0424240:CDS
CTTAGGATCAACACTGACAG+GGG 0.684115 3_2:+74446410 Msa0424240:CDS
TCCACTTCCTCCATCACCAG+CGG 0.690568 3_2:-74445486 None:intergenic
GTTGAAGGAGTCCCTACTAG+GGG 0.705935 3_2:+74448085 Msa0424240:three_prime_UTR
CAACATTAGGAAGATCAGTG+CGG 0.707517 3_2:-74447800 None:intergenic
TGAAATGACAAATGGAGGTG+TGG 0.709912 3_2:+74447504 Msa0424240:CDS
ACATTAGGAAGATCAGTGCG+GGG 0.718262 3_2:-74447798 None:intergenic
TGTGACACATCTAAAACCAG+GGG 0.732525 3_2:+74446307 Msa0424240:CDS
TGCCCTGCCTGTATTCACAG+GGG 0.737931 3_2:+74446334 Msa0424240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTTTGATTGTTTTTAT+TGG - chr3_2:74444725-74444744 None:intergenic 10.0%
!! ATAAAAACAATCAAAATTTA+CGG + chr3_2:74444725-74444744 Msa0424240:intron 10.0%
!!! CATTTTATAACTTTAATTTT+TGG - chr3_2:74445115-74445134 None:intergenic 10.0%
!!! TAAACATAGTAATTAATTTT+TGG - chr3_2:74445146-74445165 None:intergenic 10.0%
!!! TAAATTTTGATTGTTTTTAT+TGG - chr3_2:74444725-74444744 None:intergenic 10.0%
!! ATAAAAACAATCAAAATTTA+CGG + chr3_2:74444725-74444744 Msa0424240:intron 10.0%
!!! CATTTTATAACTTTAATTTT+TGG - chr3_2:74445115-74445134 None:intergenic 10.0%
!!! TAAACATAGTAATTAATTTT+TGG - chr3_2:74445146-74445165 None:intergenic 10.0%
!! TAAAAACAATCAAAATTTAC+GGG + chr3_2:74444726-74444745 Msa0424240:intron 15.0%
!!! ACATTTTACAACTTAATTTT+TGG - chr3_2:74445085-74445104 None:intergenic 15.0%
!!! TGAGTTTAATTTTAGATTAA+AGG + chr3_2:74445727-74445746 Msa0424240:intron 15.0%
!!! TAATTAATTCTTGTTTTTTG+AGG + chr3_2:74445951-74445970 Msa0424240:intron 15.0%
!!! AATTAATTCTTGTTTTTTGA+GGG + chr3_2:74445952-74445971 Msa0424240:intron 15.0%
!!! ATGAATTTTATTCATAATGT+TGG + chr3_2:74446245-74446264 Msa0424240:intron 15.0%
!!! AATAAGTTTAAAACAACTTA+TGG - chr3_2:74446708-74446727 None:intergenic 15.0%
!! TGAGATATTAATATATAACT+AGG + chr3_2:74446912-74446931 Msa0424240:intron 15.0%
!! AAAATTAAGTCATATAACTT+AGG - chr3_2:74447276-74447295 None:intergenic 15.0%
!!! CTTAATTTTTGAAATATTCT+TGG + chr3_2:74447287-74447306 Msa0424240:intron 15.0%
!! TAAAAACAATCAAAATTTAC+GGG + chr3_2:74444726-74444745 Msa0424240:intron 15.0%
!!! ACATTTTACAACTTAATTTT+TGG - chr3_2:74445085-74445104 None:intergenic 15.0%
!!! TGAGTTTAATTTTAGATTAA+AGG + chr3_2:74445727-74445746 Msa0424240:intron 15.0%
!!! TAATTAATTCTTGTTTTTTG+AGG + chr3_2:74445951-74445970 Msa0424240:intron 15.0%
!!! AATTAATTCTTGTTTTTTGA+GGG + chr3_2:74445952-74445971 Msa0424240:intron 15.0%
!!! ATGAATTTTATTCATAATGT+TGG + chr3_2:74446245-74446264 Msa0424240:intron 15.0%
!!! AATAAGTTTAAAACAACTTA+TGG - chr3_2:74446708-74446727 None:intergenic 15.0%
!! TGAGATATTAATATATAACT+AGG + chr3_2:74446912-74446931 Msa0424240:intron 15.0%
!! AAAATTAAGTCATATAACTT+AGG - chr3_2:74447276-74447295 None:intergenic 15.0%
!!! CTTAATTTTTGAAATATTCT+TGG + chr3_2:74447287-74447306 Msa0424240:intron 15.0%
!! ATAATCGTCTTTAAATCAAA+TGG - chr3_2:74444501-74444520 None:intergenic 20.0%
!! AAAAACAATCAAAATTTACG+GGG + chr3_2:74444727-74444746 Msa0424240:intron 20.0%
!! AATACATGTAATTATTGCAT+TGG + chr3_2:74444811-74444830 Msa0424240:intron 20.0%
!!! TTTCTTTTTTTTTGAACAAG+TGG + chr3_2:74445044-74445063 Msa0424240:intron 20.0%
!!! TTTTTCACTACTATAAATGA+AGG + chr3_2:74445180-74445199 Msa0424240:intron 20.0%
!!! AAATTGTGTTTTGCTTTTTA+TGG + chr3_2:74445342-74445361 Msa0424240:intron 20.0%
!! TGATTTGATTGTATATGAAA+AGG + chr3_2:74445667-74445686 Msa0424240:intron 20.0%
!! GATTTGATTGTATATGAAAA+GGG + chr3_2:74445668-74445687 Msa0424240:intron 20.0%
!! ATTTGATTGTATATGAAAAG+GGG + chr3_2:74445669-74445688 Msa0424240:intron 20.0%
!!! ATTAATTCTTGTTTTTTGAG+GGG + chr3_2:74445953-74445972 Msa0424240:intron 20.0%
!!! ACTTCATTTTTCTTACTATA+TGG + chr3_2:74446168-74446187 Msa0424240:intron 20.0%
!!! CTTATTTTTATAATCTCTCT+AGG + chr3_2:74446722-74446741 Msa0424240:intron 20.0%
!! TATATTAATATCTCAATGCA+AGG - chr3_2:74446907-74446926 None:intergenic 20.0%
!! GATTCAATAATACAAATTTC+AGG + chr3_2:74447128-74447147 Msa0424240:intron 20.0%
!! CTCAATCTTAAATCATTTAA+TGG - chr3_2:74447248-74447267 None:intergenic 20.0%
!!! CATTAAATGATTTAAGATTG+AGG + chr3_2:74447246-74447265 Msa0424240:intron 20.0%
!! TTTCATTCAACAAATTCATA+GGG - chr3_2:74447743-74447762 None:intergenic 20.0%
!! ACAAATTCAATAATCAGAAA+TGG - chr3_2:74448169-74448188 None:intergenic 20.0%
!! CATTATATTCATCATATACT+AGG - chr3_2:74448235-74448254 None:intergenic 20.0%
!! ATCCTAAAATAAAAAGATAG+AGG + chr3_2:74448310-74448329 Msa0424240:three_prime_UTR 20.0%
!!! ATCCTCTATCTTTTTATTTT+AGG - chr3_2:74448315-74448334 None:intergenic 20.0%
!! ATAATCGTCTTTAAATCAAA+TGG - chr3_2:74444501-74444520 None:intergenic 20.0%
!! AAAAACAATCAAAATTTACG+GGG + chr3_2:74444727-74444746 Msa0424240:intron 20.0%
!! AATACATGTAATTATTGCAT+TGG + chr3_2:74444811-74444830 Msa0424240:intron 20.0%
!!! TTTCTTTTTTTTTGAACAAG+TGG + chr3_2:74445044-74445063 Msa0424240:intron 20.0%
!!! TTTTTCACTACTATAAATGA+AGG + chr3_2:74445180-74445199 Msa0424240:intron 20.0%
!!! AAATTGTGTTTTGCTTTTTA+TGG + chr3_2:74445342-74445361 Msa0424240:intron 20.0%
!! TGATTTGATTGTATATGAAA+AGG + chr3_2:74445667-74445686 Msa0424240:intron 20.0%
!! GATTTGATTGTATATGAAAA+GGG + chr3_2:74445668-74445687 Msa0424240:intron 20.0%
!! ATTTGATTGTATATGAAAAG+GGG + chr3_2:74445669-74445688 Msa0424240:intron 20.0%
!!! ATTAATTCTTGTTTTTTGAG+GGG + chr3_2:74445953-74445972 Msa0424240:intron 20.0%
!!! ACTTCATTTTTCTTACTATA+TGG + chr3_2:74446168-74446187 Msa0424240:intron 20.0%
!!! CTTATTTTTATAATCTCTCT+AGG + chr3_2:74446722-74446741 Msa0424240:intron 20.0%
!! TATATTAATATCTCAATGCA+AGG - chr3_2:74446907-74446926 None:intergenic 20.0%
!! GATTCAATAATACAAATTTC+AGG + chr3_2:74447128-74447147 Msa0424240:intron 20.0%
!! CTCAATCTTAAATCATTTAA+TGG - chr3_2:74447248-74447267 None:intergenic 20.0%
!!! CATTAAATGATTTAAGATTG+AGG + chr3_2:74447246-74447265 Msa0424240:intron 20.0%
!! TTTCATTCAACAAATTCATA+GGG - chr3_2:74447743-74447762 None:intergenic 20.0%
!! ACAAATTCAATAATCAGAAA+TGG - chr3_2:74448169-74448188 None:intergenic 20.0%
!! CATTATATTCATCATATACT+AGG - chr3_2:74448235-74448254 None:intergenic 20.0%
!! ATCCTAAAATAAAAAGATAG+AGG + chr3_2:74448310-74448329 Msa0424240:three_prime_UTR 20.0%
!!! ATCCTCTATCTTTTTATTTT+AGG - chr3_2:74448315-74448334 None:intergenic 20.0%
!! TATTTGGAGTAGTATACAAT+TGG + chr3_2:74444686-74444705 Msa0424240:intron 25.0%
! ACAAGACCCAAAATTTATAA+AGG + chr3_2:74444912-74444931 Msa0424240:intron 25.0%
!! CCTCTTCCTTTATAAATTTT+GGG - chr3_2:74444921-74444940 None:intergenic 25.0%
! CCAAAATTTATAAAGGAAGA+GGG + chr3_2:74444919-74444938 Msa0424240:intron 25.0%
!! AGAATATTCTAGAAACGAAA+AGG + chr3_2:74444946-74444965 Msa0424240:intron 25.0%
! ACTATGTTTAGAAAATCACT+CGG + chr3_2:74445156-74445175 Msa0424240:intron 25.0%
! TTTGTAACAAAGAGAAAAAG+AGG - chr3_2:74445312-74445331 None:intergenic 25.0%
!!! TTTTGCTTTTTATGGATCTA+AGG + chr3_2:74445350-74445369 Msa0424240:intron 25.0%
!!! TTTGCTTTTTATGGATCTAA+GGG + chr3_2:74445351-74445370 Msa0424240:intron 25.0%
! TTTGATTGTATATGAAAAGG+GGG + chr3_2:74445670-74445689 Msa0424240:intron 25.0%
! TAGATTAAAGGAAATTAAGC+TGG + chr3_2:74445739-74445758 Msa0424240:intron 25.0%
!!! ATTGGAGTCTTTTTTAATCT+GGG + chr3_2:74445764-74445783 Msa0424240:intron 25.0%
! TATGAATTGAATCCTTTACA+AGG - chr3_2:74445981-74446000 None:intergenic 25.0%
! CAATAAATCAATCATATCTG+TGG - chr3_2:74446082-74446101 None:intergenic 25.0%
! CGTAAGTACTTAAATGATAA+GGG + chr3_2:74446825-74446844 Msa0424240:intron 25.0%
! AGGATATATTATACACTACT+TGG - chr3_2:74446887-74446906 None:intergenic 25.0%
! TATAAAAGTAACATACAGCA+AGG - chr3_2:74447058-74447077 None:intergenic 25.0%
! CTTTCATTCAACAAATTCAT+AGG - chr3_2:74447744-74447763 None:intergenic 25.0%
!!! CTATGAATTTGTTGAATGAA+AGG + chr3_2:74447742-74447761 Msa0424240:CDS 25.0%
!! TATTTGGAGTAGTATACAAT+TGG + chr3_2:74444686-74444705 Msa0424240:intron 25.0%
! ACAAGACCCAAAATTTATAA+AGG + chr3_2:74444912-74444931 Msa0424240:intron 25.0%
!! CCTCTTCCTTTATAAATTTT+GGG - chr3_2:74444921-74444940 None:intergenic 25.0%
! CCAAAATTTATAAAGGAAGA+GGG + chr3_2:74444919-74444938 Msa0424240:intron 25.0%
!! AGAATATTCTAGAAACGAAA+AGG + chr3_2:74444946-74444965 Msa0424240:intron 25.0%
! ACTATGTTTAGAAAATCACT+CGG + chr3_2:74445156-74445175 Msa0424240:intron 25.0%
! TTTGTAACAAAGAGAAAAAG+AGG - chr3_2:74445312-74445331 None:intergenic 25.0%
!!! TTTTGCTTTTTATGGATCTA+AGG + chr3_2:74445350-74445369 Msa0424240:intron 25.0%
!!! TTTGCTTTTTATGGATCTAA+GGG + chr3_2:74445351-74445370 Msa0424240:intron 25.0%
! TTTGATTGTATATGAAAAGG+GGG + chr3_2:74445670-74445689 Msa0424240:intron 25.0%
! TAGATTAAAGGAAATTAAGC+TGG + chr3_2:74445739-74445758 Msa0424240:intron 25.0%
!!! ATTGGAGTCTTTTTTAATCT+GGG + chr3_2:74445764-74445783 Msa0424240:intron 25.0%
! TATGAATTGAATCCTTTACA+AGG - chr3_2:74445981-74446000 None:intergenic 25.0%
! CAATAAATCAATCATATCTG+TGG - chr3_2:74446082-74446101 None:intergenic 25.0%
! CGTAAGTACTTAAATGATAA+GGG + chr3_2:74446825-74446844 Msa0424240:intron 25.0%
! AGGATATATTATACACTACT+TGG - chr3_2:74446887-74446906 None:intergenic 25.0%
! TATAAAAGTAACATACAGCA+AGG - chr3_2:74447058-74447077 None:intergenic 25.0%
! CTTTCATTCAACAAATTCAT+AGG - chr3_2:74447744-74447763 None:intergenic 25.0%
!!! CTATGAATTTGTTGAATGAA+AGG + chr3_2:74447742-74447761 Msa0424240:CDS 25.0%
AGAAAACAATAAATGTTGCC+TGG + chr3_2:74444607-74444626 Msa0424240:intron 30.0%
ATGCAAAAGTGACACATATT+TGG + chr3_2:74444670-74444689 Msa0424240:intron 30.0%
CCCAAAATTTATAAAGGAAG+AGG + chr3_2:74444918-74444937 Msa0424240:intron 30.0%
! CCCTCTTCCTTTATAAATTT+TGG - chr3_2:74444922-74444941 None:intergenic 30.0%
AGAAAGAAACACAATCCAAA+TGG - chr3_2:74445378-74445397 None:intergenic 30.0%
AGCTGCAGATATAAAATGAT+CGG - chr3_2:74445442-74445461 None:intergenic 30.0%
GTAAACATCAGTATGACAAA+GGG - chr3_2:74445562-74445581 None:intergenic 30.0%
AGTAAACATCAGTATGACAA+AGG - chr3_2:74445563-74445582 None:intergenic 30.0%
TCATACTGATGTTTACTTCT+GGG + chr3_2:74445566-74445585 Msa0424240:CDS 30.0%
!!! GATTGGAGTCTTTTTTAATC+TGG + chr3_2:74445763-74445782 Msa0424240:intron 30.0%
TTATTCTTTCCTTCTGTTTC+AGG + chr3_2:74445832-74445851 Msa0424240:intron 30.0%
TATTCTTTCCTTCTGTTTCA+GGG + chr3_2:74445833-74445852 Msa0424240:intron 30.0%
TCAGTCAAGATTCTCTATTA+AGG + chr3_2:74446451-74446470 Msa0424240:CDS 30.0%
CAGTCAAGATTCTCTATTAA+GGG + chr3_2:74446452-74446471 Msa0424240:CDS 30.0%
AGAATACAAACTTTGTCAAG+TGG - chr3_2:74446569-74446588 None:intergenic 30.0%
GCGTAAGTACTTAAATGATA+AGG + chr3_2:74446824-74446843 Msa0424240:intron 30.0%
CCATGAATGCAAATTGAATT+AGG - chr3_2:74446953-74446972 None:intergenic 30.0%
CCTAATTCAATTTGCATTCA+TGG + chr3_2:74446950-74446969 Msa0424240:intron 30.0%
GCATTGTACCTAATTCAAAT+CGG - chr3_2:74447215-74447234 None:intergenic 30.0%
GTAATTGCTGAAATGACAAA+TGG + chr3_2:74447496-74447515 Msa0424240:CDS 30.0%
!!! ATTTTGTTTTGCATACATCG+TGG - chr3_2:74447588-74447607 None:intergenic 30.0%
AGAAGTTATAAAGCTTACTG+AGG + chr3_2:74447632-74447651 Msa0424240:intron 30.0%
!!! AGCCTTGATTTGTTTTTCTT+AGG + chr3_2:74447659-74447678 Msa0424240:intron 30.0%
!!! GCCTTGATTTGTTTTTCTTA+GGG + chr3_2:74447660-74447679 Msa0424240:intron 30.0%
ACCCTAAGAAAAACAAATCA+AGG - chr3_2:74447664-74447683 None:intergenic 30.0%
!!! TGATTTGTTTTTCTTAGGGT+TGG + chr3_2:74447664-74447683 Msa0424240:intron 30.0%
!! GATTTGTTTTTCTTAGGGTT+GGG + chr3_2:74447665-74447684 Msa0424240:intron 30.0%
!! ATTTGTTTTTCTTAGGGTTG+GGG + chr3_2:74447666-74447685 Msa0424240:intron 30.0%
TTGAATGCATCATCTTTGTT+TGG - chr3_2:74447714-74447733 None:intergenic 30.0%
TTGAATGAAAGGACTCTTAA+GGG + chr3_2:74447753-74447772 Msa0424240:CDS 30.0%
ATGTACTTCTCTACAACATT+AGG - chr3_2:74447816-74447835 None:intergenic 30.0%
! TTGTAGAGAAGTACATGAAA+GGG + chr3_2:74447820-74447839 Msa0424240:CDS 30.0%
!! TGTTGATAATTTGATACTGC+AGG + chr3_2:74447932-74447951 Msa0424240:intron 30.0%
! GCTTTGTTAATCTCTGAAAA+TGG - chr3_2:74447989-74448008 None:intergenic 30.0%
AGAAAACAATAAATGTTGCC+TGG + chr3_2:74444607-74444626 Msa0424240:intron 30.0%
ATGCAAAAGTGACACATATT+TGG + chr3_2:74444670-74444689 Msa0424240:intron 30.0%
CCCAAAATTTATAAAGGAAG+AGG + chr3_2:74444918-74444937 Msa0424240:intron 30.0%
! CCCTCTTCCTTTATAAATTT+TGG - chr3_2:74444922-74444941 None:intergenic 30.0%
AGAAAGAAACACAATCCAAA+TGG - chr3_2:74445378-74445397 None:intergenic 30.0%
AGCTGCAGATATAAAATGAT+CGG - chr3_2:74445442-74445461 None:intergenic 30.0%
GTAAACATCAGTATGACAAA+GGG - chr3_2:74445562-74445581 None:intergenic 30.0%
AGTAAACATCAGTATGACAA+AGG - chr3_2:74445563-74445582 None:intergenic 30.0%
TCATACTGATGTTTACTTCT+GGG + chr3_2:74445566-74445585 Msa0424240:CDS 30.0%
!!! GATTGGAGTCTTTTTTAATC+TGG + chr3_2:74445763-74445782 Msa0424240:intron 30.0%
TTATTCTTTCCTTCTGTTTC+AGG + chr3_2:74445832-74445851 Msa0424240:intron 30.0%
TATTCTTTCCTTCTGTTTCA+GGG + chr3_2:74445833-74445852 Msa0424240:intron 30.0%
TCAGTCAAGATTCTCTATTA+AGG + chr3_2:74446451-74446470 Msa0424240:CDS 30.0%
CAGTCAAGATTCTCTATTAA+GGG + chr3_2:74446452-74446471 Msa0424240:CDS 30.0%
AGAATACAAACTTTGTCAAG+TGG - chr3_2:74446569-74446588 None:intergenic 30.0%
GCGTAAGTACTTAAATGATA+AGG + chr3_2:74446824-74446843 Msa0424240:intron 30.0%
CCATGAATGCAAATTGAATT+AGG - chr3_2:74446953-74446972 None:intergenic 30.0%
CCTAATTCAATTTGCATTCA+TGG + chr3_2:74446950-74446969 Msa0424240:intron 30.0%
GCATTGTACCTAATTCAAAT+CGG - chr3_2:74447215-74447234 None:intergenic 30.0%
GTAATTGCTGAAATGACAAA+TGG + chr3_2:74447496-74447515 Msa0424240:CDS 30.0%
!!! ATTTTGTTTTGCATACATCG+TGG - chr3_2:74447588-74447607 None:intergenic 30.0%
AGAAGTTATAAAGCTTACTG+AGG + chr3_2:74447632-74447651 Msa0424240:intron 30.0%
!!! AGCCTTGATTTGTTTTTCTT+AGG + chr3_2:74447659-74447678 Msa0424240:intron 30.0%
!!! GCCTTGATTTGTTTTTCTTA+GGG + chr3_2:74447660-74447679 Msa0424240:intron 30.0%
ACCCTAAGAAAAACAAATCA+AGG - chr3_2:74447664-74447683 None:intergenic 30.0%
!!! TGATTTGTTTTTCTTAGGGT+TGG + chr3_2:74447664-74447683 Msa0424240:intron 30.0%
!! GATTTGTTTTTCTTAGGGTT+GGG + chr3_2:74447665-74447684 Msa0424240:intron 30.0%
!! ATTTGTTTTTCTTAGGGTTG+GGG + chr3_2:74447666-74447685 Msa0424240:intron 30.0%
TTGAATGCATCATCTTTGTT+TGG - chr3_2:74447714-74447733 None:intergenic 30.0%
TTGAATGAAAGGACTCTTAA+GGG + chr3_2:74447753-74447772 Msa0424240:CDS 30.0%
ATGTACTTCTCTACAACATT+AGG - chr3_2:74447816-74447835 None:intergenic 30.0%
! TTGTAGAGAAGTACATGAAA+GGG + chr3_2:74447820-74447839 Msa0424240:CDS 30.0%
!! TGTTGATAATTTGATACTGC+AGG + chr3_2:74447932-74447951 Msa0424240:intron 30.0%
! GCTTTGTTAATCTCTGAAAA+TGG - chr3_2:74447989-74448008 None:intergenic 30.0%
AAATGCATAGGTATGATCAC+TGG + chr3_2:74444383-74444402 Msa0424240:intron 35.0%
GGTATGATCACTGGATTTAT+TGG + chr3_2:74444392-74444411 Msa0424240:intron 35.0%
!! GCTGTCACTTTAAAATAACC+AGG - chr3_2:74444628-74444647 None:intergenic 35.0%
! TGATTATGAGTGAGTTGAGT+GGG - chr3_2:74445226-74445245 None:intergenic 35.0%
! ATGATTATGAGTGAGTTGAG+TGG - chr3_2:74445227-74445246 None:intergenic 35.0%
TTAACTATGTCGAACACTGT+TGG + chr3_2:74445257-74445276 Msa0424240:exon 35.0%
ACAAAGAGAAAAAGAGGACA+TGG - chr3_2:74445306-74445325 None:intergenic 35.0%
! TCATTTTATATCTGCAGCTG+CGG + chr3_2:74445443-74445462 Msa0424240:intron 35.0%
GTCATACTGATGTTTACTTC+TGG + chr3_2:74445565-74445584 Msa0424240:CDS 35.0%
AAGGAAATTAAGCTGGTGAT+TGG + chr3_2:74445746-74445765 Msa0424240:intron 35.0%
CCAAAAATACGAGGAAACAA+TGG - chr3_2:74445866-74445885 None:intergenic 35.0%
! CCATTGTTTCCTCGTATTTT+TGG + chr3_2:74445863-74445882 Msa0424240:CDS 35.0%
GAATATACTGTTGTTCATGC+TGG + chr3_2:74446515-74446534 Msa0424240:CDS 35.0%
AAAGTTTGTATTCTCAGCTG+TGG + chr3_2:74446575-74446594 Msa0424240:CDS 35.0%
CAATTTGCATTCATGGTTGT+AGG + chr3_2:74446957-74446976 Msa0424240:intron 35.0%
AAAGATAGCAACAGATGAAC+CGG - chr3_2:74447018-74447037 None:intergenic 35.0%
!! GTTTCTAGCCGATTTGAATT+AGG + chr3_2:74447204-74447223 Msa0424240:CDS 35.0%
TGTTGAACTAACCTGTTGTA+CGG - chr3_2:74447370-74447389 None:intergenic 35.0%
ATTGCTGAAATGACAAATGG+AGG + chr3_2:74447499-74447518 Msa0424240:CDS 35.0%
GTTGAATGAAAGGACTCTTA+AGG + chr3_2:74447752-74447771 Msa0424240:CDS 35.0%
!!! ACTCTTAAGGGTACCTTTTA+TGG + chr3_2:74447765-74447784 Msa0424240:CDS 35.0%
GGGTTTGTAGTTACCATAAA+AGG - chr3_2:74447781-74447800 None:intergenic 35.0%
! GTTGTAGAGAAGTACATGAA+AGG + chr3_2:74447819-74447838 Msa0424240:CDS 35.0%
! TGTAGAGAAGTACATGAAAG+GGG + chr3_2:74447821-74447840 Msa0424240:CDS 35.0%
!! GCTTTTGATTACATGCTGAA+AGG + chr3_2:74448007-74448026 Msa0424240:exon 35.0%
! TAGAGTTTTACTCCTCCATT+CGG - chr3_2:74448054-74448073 None:intergenic 35.0%
CTATGTTCTTGTTCTCAATC+TGG + chr3_2:74448109-74448128 Msa0424240:three_prime_UTR 35.0%
GACTCTTTGTGAAGTTTGAT+TGG + chr3_2:74448189-74448208 Msa0424240:three_prime_UTR 35.0%
AAATGCATAGGTATGATCAC+TGG + chr3_2:74444383-74444402 Msa0424240:intron 35.0%
GGTATGATCACTGGATTTAT+TGG + chr3_2:74444392-74444411 Msa0424240:intron 35.0%
!! GCTGTCACTTTAAAATAACC+AGG - chr3_2:74444628-74444647 None:intergenic 35.0%
! TGATTATGAGTGAGTTGAGT+GGG - chr3_2:74445226-74445245 None:intergenic 35.0%
! ATGATTATGAGTGAGTTGAG+TGG - chr3_2:74445227-74445246 None:intergenic 35.0%
TTAACTATGTCGAACACTGT+TGG + chr3_2:74445257-74445276 Msa0424240:exon 35.0%
ACAAAGAGAAAAAGAGGACA+TGG - chr3_2:74445306-74445325 None:intergenic 35.0%
! TCATTTTATATCTGCAGCTG+CGG + chr3_2:74445443-74445462 Msa0424240:intron 35.0%
GTCATACTGATGTTTACTTC+TGG + chr3_2:74445565-74445584 Msa0424240:CDS 35.0%
AAGGAAATTAAGCTGGTGAT+TGG + chr3_2:74445746-74445765 Msa0424240:intron 35.0%
CCAAAAATACGAGGAAACAA+TGG - chr3_2:74445866-74445885 None:intergenic 35.0%
! CCATTGTTTCCTCGTATTTT+TGG + chr3_2:74445863-74445882 Msa0424240:CDS 35.0%
GAATATACTGTTGTTCATGC+TGG + chr3_2:74446515-74446534 Msa0424240:CDS 35.0%
AAAGTTTGTATTCTCAGCTG+TGG + chr3_2:74446575-74446594 Msa0424240:CDS 35.0%
CAATTTGCATTCATGGTTGT+AGG + chr3_2:74446957-74446976 Msa0424240:intron 35.0%
AAAGATAGCAACAGATGAAC+CGG - chr3_2:74447018-74447037 None:intergenic 35.0%
!! GTTTCTAGCCGATTTGAATT+AGG + chr3_2:74447204-74447223 Msa0424240:CDS 35.0%
TGTTGAACTAACCTGTTGTA+CGG - chr3_2:74447370-74447389 None:intergenic 35.0%
ATTGCTGAAATGACAAATGG+AGG + chr3_2:74447499-74447518 Msa0424240:CDS 35.0%
GTTGAATGAAAGGACTCTTA+AGG + chr3_2:74447752-74447771 Msa0424240:CDS 35.0%
!!! ACTCTTAAGGGTACCTTTTA+TGG + chr3_2:74447765-74447784 Msa0424240:CDS 35.0%
GGGTTTGTAGTTACCATAAA+AGG - chr3_2:74447781-74447800 None:intergenic 35.0%
! GTTGTAGAGAAGTACATGAA+AGG + chr3_2:74447819-74447838 Msa0424240:CDS 35.0%
! TGTAGAGAAGTACATGAAAG+GGG + chr3_2:74447821-74447840 Msa0424240:CDS 35.0%
!! GCTTTTGATTACATGCTGAA+AGG + chr3_2:74448007-74448026 Msa0424240:exon 35.0%
! TAGAGTTTTACTCCTCCATT+CGG - chr3_2:74448054-74448073 None:intergenic 35.0%
CTATGTTCTTGTTCTCAATC+TGG + chr3_2:74448109-74448128 Msa0424240:three_prime_UTR 35.0%
GACTCTTTGTGAAGTTTGAT+TGG + chr3_2:74448189-74448208 Msa0424240:three_prime_UTR 35.0%
GGTCAAGTCATCAAATGCAT+AGG + chr3_2:74444371-74444390 Msa0424240:five_prime_UTR 40.0%
ATGGCACACTTAATCTGAGA+CGG - chr3_2:74444482-74444501 None:intergenic 40.0%
!! AGTATGCTTAAAGAGTGTCC+CGG + chr3_2:74444877-74444896 Msa0424240:intron 40.0%
TCTTGTTAATGAGTGTCTCC+GGG - chr3_2:74444898-74444917 None:intergenic 40.0%
! GTCTTGTTAATGAGTGTCTC+CGG - chr3_2:74444899-74444918 None:intergenic 40.0%
TAGAAACGAAAAGGAGAACC+AGG + chr3_2:74444955-74444974 Msa0424240:intron 40.0%
GAACCAGGTGGTATAATTTG+TGG + chr3_2:74444970-74444989 Msa0424240:intron 40.0%
AAGCCACAAATTATACCACC+TGG - chr3_2:74444976-74444995 None:intergenic 40.0%
! AGGTGGTATAATTTGTGGCT+TGG + chr3_2:74444975-74444994 Msa0424240:intron 40.0%
! TGGTATAATTTGTGGCTTGG+TGG + chr3_2:74444978-74444997 Msa0424240:intron 40.0%
GTGGTAAAGTCAAATCCCAA+AGG + chr3_2:74444997-74445016 Msa0424240:intron 40.0%
! GATTATGAGTGAGTTGAGTG+GGG - chr3_2:74445225-74445244 None:intergenic 40.0%
TATGGATCTAAGGGTCCATT+TGG + chr3_2:74445360-74445379 Msa0424240:intron 40.0%
!! AGGTGAAGAGTATCTTGAGA+CGG - chr3_2:74445539-74445558 None:intergenic 40.0%
AACATCAGTATGACAAAGGG+AGG - chr3_2:74445559-74445578 None:intergenic 40.0%
! TGTTTACTTCTGGGAAGCTA+AGG + chr3_2:74445575-74445594 Msa0424240:CDS 40.0%
GCTTCATGACCAAAAATACG+AGG - chr3_2:74445875-74445894 None:intergenic 40.0%
!!! CGTATTTTTGGTCATGAAGC+TGG + chr3_2:74445875-74445894 Msa0424240:CDS 40.0%
!!! ATTTTTGGTCATGAAGCTGG+AGG + chr3_2:74445878-74445897 Msa0424240:CDS 40.0%
!! TTTTTGGTCATGAAGCTGGA+GGG + chr3_2:74445879-74445898 Msa0424240:CDS 40.0%
!! TTTTGAGGGGTTCCTTGTAA+AGG + chr3_2:74445966-74445985 Msa0424240:intron 40.0%
ATGTTGGCATGATGTTGATC+AGG + chr3_2:74446261-74446280 Msa0424240:intron 40.0%
CATGATGTTGATCAGGATTG+TGG + chr3_2:74446268-74446287 Msa0424240:intron 40.0%
! GTGTGACACATCTAAAACCA+GGG + chr3_2:74446306-74446325 Msa0424240:CDS 40.0%
! TGTGACACATCTAAAACCAG+GGG + chr3_2:74446307-74446326 Msa0424240:CDS 40.0%
GCAACATGTGTGATCTTCTT+AGG + chr3_2:74446393-74446412 Msa0424240:CDS 40.0%
TTCTTAGGATCAACACTGAC+AGG + chr3_2:74446408-74446427 Msa0424240:CDS 40.0%
TCTTAGGATCAACACTGACA+GGG + chr3_2:74446409-74446428 Msa0424240:CDS 40.0%
TTTCGGCTTAGCAACATTGA+TGG - chr3_2:74446994-74447013 None:intergenic 40.0%
AAGATAGCAACAGATGAACC+GGG - chr3_2:74447017-74447036 None:intergenic 40.0%
GGTTCATCTGTTGCTATCTT+TGG + chr3_2:74447017-74447036 Msa0424240:CDS 40.0%
TCTGTTGCTATCTTTGGACT+TGG + chr3_2:74447023-74447042 Msa0424240:CDS 40.0%
AACACAAACACACACACTCA+TGG - chr3_2:74447081-74447100 None:intergenic 40.0%
TACAAATTTCAGGCTGCTGA+AGG + chr3_2:74447138-74447157 Msa0424240:intron 40.0%
TCTGGTGCATCAAGAATCAT+TGG + chr3_2:74447171-74447190 Msa0424240:CDS 40.0%
TTGGTCTCAGCTAAGAAGTT+TGG + chr3_2:74447306-74447325 Msa0424240:intron 40.0%
TGGTCTCAGCTAAGAAGTTT+GGG + chr3_2:74447307-74447326 Msa0424240:intron 40.0%
! CGGGTTTGTCATGATCTTTT+GGG - chr3_2:74447350-74447369 None:intergenic 40.0%
! ACGGGTTTGTCATGATCTTT+TGG - chr3_2:74447351-74447370 None:intergenic 40.0%
GTTGAACTAACCTGTTGTAC+GGG - chr3_2:74447369-74447388 None:intergenic 40.0%
TGAAATGACAAATGGAGGTG+TGG + chr3_2:74447504-74447523 Msa0424240:CDS 40.0%
! ATCGTGCTGTTGAATGTACT+GGG + chr3_2:74447527-74447546 Msa0424240:CDS 40.0%
ACATTCGAAAGCTGAGATCA+TGG - chr3_2:74447563-74447582 None:intergenic 40.0%
AACATTAGGAAGATCAGTGC+GGG - chr3_2:74447802-74447821 None:intergenic 40.0%
CAACATTAGGAAGATCAGTG+CGG - chr3_2:74447803-74447822 None:intergenic 40.0%
TAATTTGATACTGCAGGAGC+TGG + chr3_2:74447938-74447957 Msa0424240:intron 40.0%
TCTAGCTAGAACACTGTTGA+AGG + chr3_2:74448070-74448089 Msa0424240:three_prime_UTR 40.0%
AAGAACATAGTCCCCTAGTA+GGG - chr3_2:74448099-74448118 None:intergenic 40.0%
TGTTCTTGTTCTCAATCTGG+CGG + chr3_2:74448112-74448131 Msa0424240:three_prime_UTR 40.0%
GGTCAAGTCATCAAATGCAT+AGG + chr3_2:74444371-74444390 Msa0424240:five_prime_UTR 40.0%
ATGGCACACTTAATCTGAGA+CGG - chr3_2:74444482-74444501 None:intergenic 40.0%
!! AGTATGCTTAAAGAGTGTCC+CGG + chr3_2:74444877-74444896 Msa0424240:intron 40.0%
TCTTGTTAATGAGTGTCTCC+GGG - chr3_2:74444898-74444917 None:intergenic 40.0%
! GTCTTGTTAATGAGTGTCTC+CGG - chr3_2:74444899-74444918 None:intergenic 40.0%
TAGAAACGAAAAGGAGAACC+AGG + chr3_2:74444955-74444974 Msa0424240:intron 40.0%
GAACCAGGTGGTATAATTTG+TGG + chr3_2:74444970-74444989 Msa0424240:intron 40.0%
AAGCCACAAATTATACCACC+TGG - chr3_2:74444976-74444995 None:intergenic 40.0%
! AGGTGGTATAATTTGTGGCT+TGG + chr3_2:74444975-74444994 Msa0424240:intron 40.0%
! TGGTATAATTTGTGGCTTGG+TGG + chr3_2:74444978-74444997 Msa0424240:intron 40.0%
GTGGTAAAGTCAAATCCCAA+AGG + chr3_2:74444997-74445016 Msa0424240:intron 40.0%
! GATTATGAGTGAGTTGAGTG+GGG - chr3_2:74445225-74445244 None:intergenic 40.0%
TATGGATCTAAGGGTCCATT+TGG + chr3_2:74445360-74445379 Msa0424240:intron 40.0%
!! AGGTGAAGAGTATCTTGAGA+CGG - chr3_2:74445539-74445558 None:intergenic 40.0%
AACATCAGTATGACAAAGGG+AGG - chr3_2:74445559-74445578 None:intergenic 40.0%
! TGTTTACTTCTGGGAAGCTA+AGG + chr3_2:74445575-74445594 Msa0424240:CDS 40.0%
GCTTCATGACCAAAAATACG+AGG - chr3_2:74445875-74445894 None:intergenic 40.0%
!!! CGTATTTTTGGTCATGAAGC+TGG + chr3_2:74445875-74445894 Msa0424240:CDS 40.0%
!!! ATTTTTGGTCATGAAGCTGG+AGG + chr3_2:74445878-74445897 Msa0424240:CDS 40.0%
!! TTTTTGGTCATGAAGCTGGA+GGG + chr3_2:74445879-74445898 Msa0424240:CDS 40.0%
!! TTTTGAGGGGTTCCTTGTAA+AGG + chr3_2:74445966-74445985 Msa0424240:intron 40.0%
ATGTTGGCATGATGTTGATC+AGG + chr3_2:74446261-74446280 Msa0424240:intron 40.0%
CATGATGTTGATCAGGATTG+TGG + chr3_2:74446268-74446287 Msa0424240:intron 40.0%
! GTGTGACACATCTAAAACCA+GGG + chr3_2:74446306-74446325 Msa0424240:CDS 40.0%
! TGTGACACATCTAAAACCAG+GGG + chr3_2:74446307-74446326 Msa0424240:CDS 40.0%
GCAACATGTGTGATCTTCTT+AGG + chr3_2:74446393-74446412 Msa0424240:CDS 40.0%
TTCTTAGGATCAACACTGAC+AGG + chr3_2:74446408-74446427 Msa0424240:CDS 40.0%
TCTTAGGATCAACACTGACA+GGG + chr3_2:74446409-74446428 Msa0424240:CDS 40.0%
TTTCGGCTTAGCAACATTGA+TGG - chr3_2:74446994-74447013 None:intergenic 40.0%
AAGATAGCAACAGATGAACC+GGG - chr3_2:74447017-74447036 None:intergenic 40.0%
GGTTCATCTGTTGCTATCTT+TGG + chr3_2:74447017-74447036 Msa0424240:CDS 40.0%
TCTGTTGCTATCTTTGGACT+TGG + chr3_2:74447023-74447042 Msa0424240:CDS 40.0%
AACACAAACACACACACTCA+TGG - chr3_2:74447081-74447100 None:intergenic 40.0%
TACAAATTTCAGGCTGCTGA+AGG + chr3_2:74447138-74447157 Msa0424240:intron 40.0%
TCTGGTGCATCAAGAATCAT+TGG + chr3_2:74447171-74447190 Msa0424240:CDS 40.0%
TTGGTCTCAGCTAAGAAGTT+TGG + chr3_2:74447306-74447325 Msa0424240:intron 40.0%
TGGTCTCAGCTAAGAAGTTT+GGG + chr3_2:74447307-74447326 Msa0424240:intron 40.0%
! CGGGTTTGTCATGATCTTTT+GGG - chr3_2:74447350-74447369 None:intergenic 40.0%
! ACGGGTTTGTCATGATCTTT+TGG - chr3_2:74447351-74447370 None:intergenic 40.0%
GTTGAACTAACCTGTTGTAC+GGG - chr3_2:74447369-74447388 None:intergenic 40.0%
TGAAATGACAAATGGAGGTG+TGG + chr3_2:74447504-74447523 Msa0424240:CDS 40.0%
! ATCGTGCTGTTGAATGTACT+GGG + chr3_2:74447527-74447546 Msa0424240:CDS 40.0%
ACATTCGAAAGCTGAGATCA+TGG - chr3_2:74447563-74447582 None:intergenic 40.0%
AACATTAGGAAGATCAGTGC+GGG - chr3_2:74447802-74447821 None:intergenic 40.0%
CAACATTAGGAAGATCAGTG+CGG - chr3_2:74447803-74447822 None:intergenic 40.0%
TAATTTGATACTGCAGGAGC+TGG + chr3_2:74447938-74447957 Msa0424240:intron 40.0%
TCTAGCTAGAACACTGTTGA+AGG + chr3_2:74448070-74448089 Msa0424240:three_prime_UTR 40.0%
AAGAACATAGTCCCCTAGTA+GGG - chr3_2:74448099-74448118 None:intergenic 40.0%
TGTTCTTGTTCTCAATCTGG+CGG + chr3_2:74448112-74448131 Msa0424240:three_prime_UTR 40.0%
GCTGTACTCGACATGACTTA+AGG - chr3_2:74444350-74444369 None:intergenic 45.0%
TAAGTCATGTCGAGTACAGC+TGG + chr3_2:74444350-74444369 Msa0424240:five_prime_UTR 45.0%
GAAATGTTAACGAGTGTCCC+CGG + chr3_2:74444749-74444768 Msa0424240:intron 45.0%
AAATGTTAACGAGTGTCCCC+GGG + chr3_2:74444750-74444769 Msa0424240:intron 45.0%
!! ATGTTCCTTAAAGAGTGCCC+CGG - chr3_2:74444771-74444790 None:intergenic 45.0%
AAACGAAAAGGAGAACCAGG+TGG + chr3_2:74444958-74444977 Msa0424240:intron 45.0%
! ATTTTACCAGCTGCGCCTTT+GGG - chr3_2:74445015-74445034 None:intergenic 45.0%
TGAAGGTCACTGACAGTAGT+TGG + chr3_2:74445197-74445216 Msa0424240:intron 45.0%
TATGTCGAACACTGTTGGTC+AGG + chr3_2:74445262-74445281 Msa0424240:exon 45.0%
! TATCTTGAGACGGACTTCAC+CGG - chr3_2:74445529-74445548 None:intergenic 45.0%
GAGTTTGACCCTGAAACAGA+AGG - chr3_2:74445844-74445863 None:intergenic 45.0%
! GGTGTGACACATCTAAAACC+AGG + chr3_2:74446305-74446324 Msa0424240:CDS 45.0%
CTGTCCACATTGTAAGTCAG+AGG + chr3_2:74446367-74446386 Msa0424240:CDS 45.0%
CTCTCCTCTGACTTACAATG+TGG - chr3_2:74446374-74446393 None:intergenic 45.0%
CTTAGGATCAACACTGACAG+GGG + chr3_2:74446410-74446429 Msa0424240:CDS 45.0%
CAGCCCATTCATCATTTCGT+CGG + chr3_2:74446476-74446495 Msa0424240:CDS 45.0%
! GTGCCGACGAAATGATGAAT+GGG - chr3_2:74446482-74446501 None:intergenic 45.0%
! TGTGCCGACGAAATGATGAA+TGG - chr3_2:74446483-74446502 None:intergenic 45.0%
CTTTGTCAAGTGGTGCATCA+GGG - chr3_2:74446559-74446578 None:intergenic 45.0%
ACTTTGTCAAGTGGTGCATC+AGG - chr3_2:74446560-74446579 None:intergenic 45.0%
GAATATGCACAGGTATGAGC+TGG + chr3_2:74446597-74446616 Msa0424240:intron 45.0%
GCATTCATGGTTGTAGGTCT+TGG + chr3_2:74446963-74446982 Msa0424240:intron 45.0%
AATGTTGCTAAGCCGAAACC+CGG + chr3_2:74446996-74447015 Msa0424240:CDS 45.0%
ATCTTTGGACTTGGAGCTGT+TGG + chr3_2:74447032-74447051 Msa0424240:CDS 45.0%
GGTCTCAGCTAAGAAGTTTG+GGG + chr3_2:74447308-74447327 Msa0424240:intron 45.0%
TCATGACAAACCCGTACAAC+AGG + chr3_2:74447356-74447375 Msa0424240:CDS 45.0%
!!! GCTGTGTCATTTTGTGTGCA+AGG + chr3_2:74447474-74447493 Msa0424240:intron 45.0%
! GATCGTGCTGTTGAATGTAC+TGG + chr3_2:74447526-74447545 Msa0424240:CDS 45.0%
ACATTAGGAAGATCAGTGCG+GGG - chr3_2:74447801-74447820 None:intergenic 45.0%
CATTCGGATGATGCATCTGA+TGG - chr3_2:74448038-74448057 None:intergenic 45.0%
CATCAGATGCATCATCCGAA+TGG + chr3_2:74448036-74448055 Msa0424240:three_prime_UTR 45.0%
TGTTGAAGGAGTCCCTACTA+GGG + chr3_2:74448084-74448103 Msa0424240:three_prime_UTR 45.0%
CAAGAACATAGTCCCCTAGT+AGG - chr3_2:74448100-74448119 None:intergenic 45.0%
! ATTGGAGAGAGTGTGACACT+TGG + chr3_2:74448207-74448226 Msa0424240:three_prime_UTR 45.0%
GCTGTACTCGACATGACTTA+AGG - chr3_2:74444350-74444369 None:intergenic 45.0%
TAAGTCATGTCGAGTACAGC+TGG + chr3_2:74444350-74444369 Msa0424240:five_prime_UTR 45.0%
GAAATGTTAACGAGTGTCCC+CGG + chr3_2:74444749-74444768 Msa0424240:intron 45.0%
AAATGTTAACGAGTGTCCCC+GGG + chr3_2:74444750-74444769 Msa0424240:intron 45.0%
!! ATGTTCCTTAAAGAGTGCCC+CGG - chr3_2:74444771-74444790 None:intergenic 45.0%
AAACGAAAAGGAGAACCAGG+TGG + chr3_2:74444958-74444977 Msa0424240:intron 45.0%
! ATTTTACCAGCTGCGCCTTT+GGG - chr3_2:74445015-74445034 None:intergenic 45.0%
TGAAGGTCACTGACAGTAGT+TGG + chr3_2:74445197-74445216 Msa0424240:intron 45.0%
TATGTCGAACACTGTTGGTC+AGG + chr3_2:74445262-74445281 Msa0424240:exon 45.0%
! TATCTTGAGACGGACTTCAC+CGG - chr3_2:74445529-74445548 None:intergenic 45.0%
GAGTTTGACCCTGAAACAGA+AGG - chr3_2:74445844-74445863 None:intergenic 45.0%
! GGTGTGACACATCTAAAACC+AGG + chr3_2:74446305-74446324 Msa0424240:CDS 45.0%
CTGTCCACATTGTAAGTCAG+AGG + chr3_2:74446367-74446386 Msa0424240:CDS 45.0%
CTCTCCTCTGACTTACAATG+TGG - chr3_2:74446374-74446393 None:intergenic 45.0%
CTTAGGATCAACACTGACAG+GGG + chr3_2:74446410-74446429 Msa0424240:CDS 45.0%
CAGCCCATTCATCATTTCGT+CGG + chr3_2:74446476-74446495 Msa0424240:CDS 45.0%
! GTGCCGACGAAATGATGAAT+GGG - chr3_2:74446482-74446501 None:intergenic 45.0%
! TGTGCCGACGAAATGATGAA+TGG - chr3_2:74446483-74446502 None:intergenic 45.0%
CTTTGTCAAGTGGTGCATCA+GGG - chr3_2:74446559-74446578 None:intergenic 45.0%
ACTTTGTCAAGTGGTGCATC+AGG - chr3_2:74446560-74446579 None:intergenic 45.0%
GAATATGCACAGGTATGAGC+TGG + chr3_2:74446597-74446616 Msa0424240:intron 45.0%
GCATTCATGGTTGTAGGTCT+TGG + chr3_2:74446963-74446982 Msa0424240:intron 45.0%
AATGTTGCTAAGCCGAAACC+CGG + chr3_2:74446996-74447015 Msa0424240:CDS 45.0%
ATCTTTGGACTTGGAGCTGT+TGG + chr3_2:74447032-74447051 Msa0424240:CDS 45.0%
GGTCTCAGCTAAGAAGTTTG+GGG + chr3_2:74447308-74447327 Msa0424240:intron 45.0%
TCATGACAAACCCGTACAAC+AGG + chr3_2:74447356-74447375 Msa0424240:CDS 45.0%
!!! GCTGTGTCATTTTGTGTGCA+AGG + chr3_2:74447474-74447493 Msa0424240:intron 45.0%
! GATCGTGCTGTTGAATGTAC+TGG + chr3_2:74447526-74447545 Msa0424240:CDS 45.0%
ACATTAGGAAGATCAGTGCG+GGG - chr3_2:74447801-74447820 None:intergenic 45.0%
CATTCGGATGATGCATCTGA+TGG - chr3_2:74448038-74448057 None:intergenic 45.0%
CATCAGATGCATCATCCGAA+TGG + chr3_2:74448036-74448055 Msa0424240:three_prime_UTR 45.0%
TGTTGAAGGAGTCCCTACTA+GGG + chr3_2:74448084-74448103 Msa0424240:three_prime_UTR 45.0%
CAAGAACATAGTCCCCTAGT+AGG - chr3_2:74448100-74448119 None:intergenic 45.0%
! ATTGGAGAGAGTGTGACACT+TGG + chr3_2:74448207-74448226 Msa0424240:three_prime_UTR 45.0%
!!! TTTATTTTTATATTTCATTA+TGG + chr3_2:74446790-74446809 Msa0424240:intron 5.0%
!!! TTTATTTTTATATTTCATTA+TGG + chr3_2:74446790-74446809 Msa0424240:intron 5.0%
TCGTGTGTCCTTGTCGTTGT+GGG - chr3_2:74444250-74444269 None:intergenic 50.0%
ATCGTGTGTCCTTGTCGTTG+TGG - chr3_2:74444251-74444270 None:intergenic 50.0%
AATGTTAACGAGTGTCCCCG+GGG + chr3_2:74444751-74444770 Msa0424240:intron 50.0%
!! TGTTCCTTAAAGAGTGCCCC+GGG - chr3_2:74444770-74444789 None:intergenic 50.0%
! CATTTTACCAGCTGCGCCTT+TGG - chr3_2:74445016-74445035 None:intergenic 50.0%
! CAAAGGCGCAGCTGGTAAAA+TGG + chr3_2:74445014-74445033 Msa0424240:intron 50.0%
! ATCAGGATTGTGGAGAGCGT+AGG + chr3_2:74446278-74446297 Msa0424240:intron 50.0%
ATGCCCTGCCTGTATTCACA+GGG + chr3_2:74446333-74446352 Msa0424240:CDS 50.0%
! CTGTATTCACAGGGGAGTGT+GGG + chr3_2:74446342-74446361 Msa0424240:CDS 50.0%
! TGTATTCACAGGGGAGTGTG+GGG + chr3_2:74446343-74446362 Msa0424240:CDS 50.0%
CTCAGCTGTGGAATATGCAC+AGG + chr3_2:74446587-74446606 Msa0424240:CDS 50.0%
TGCACAGGTATGAGCTGGTT+TGG + chr3_2:74446602-74446621 Msa0424240:intron 50.0%
! GCACAGGTATGAGCTGGTTT+GGG + chr3_2:74446603-74446622 Msa0424240:intron 50.0%
GCAACAGATGAACCGGGTTT+CGG - chr3_2:74447011-74447030 None:intergenic 50.0%
GCTGAAGGAGCAAGGATATC+TGG + chr3_2:74447153-74447172 Msa0424240:CDS 50.0%
!! TGAATGTACTGGGAGCATCC+AGG + chr3_2:74447537-74447556 Msa0424240:CDS 50.0%
!! TGGGGTGTTGCTGTACTTGT+TGG + chr3_2:74447684-74447703 Msa0424240:CDS 50.0%
CAGATGCATCATCCGAATGG+AGG + chr3_2:74448039-74448058 Msa0424240:three_prime_UTR 50.0%
CTGTTGAAGGAGTCCCTACT+AGG + chr3_2:74448083-74448102 Msa0424240:three_prime_UTR 50.0%
GTTGAAGGAGTCCCTACTAG+GGG + chr3_2:74448085-74448104 Msa0424240:three_prime_UTR 50.0%
TCGTGTGTCCTTGTCGTTGT+GGG - chr3_2:74444250-74444269 None:intergenic 50.0%
ATCGTGTGTCCTTGTCGTTG+TGG - chr3_2:74444251-74444270 None:intergenic 50.0%
AATGTTAACGAGTGTCCCCG+GGG + chr3_2:74444751-74444770 Msa0424240:intron 50.0%
!! TGTTCCTTAAAGAGTGCCCC+GGG - chr3_2:74444770-74444789 None:intergenic 50.0%
! CATTTTACCAGCTGCGCCTT+TGG - chr3_2:74445016-74445035 None:intergenic 50.0%
! CAAAGGCGCAGCTGGTAAAA+TGG + chr3_2:74445014-74445033 Msa0424240:intron 50.0%
! ATCAGGATTGTGGAGAGCGT+AGG + chr3_2:74446278-74446297 Msa0424240:intron 50.0%
ATGCCCTGCCTGTATTCACA+GGG + chr3_2:74446333-74446352 Msa0424240:CDS 50.0%
! CTGTATTCACAGGGGAGTGT+GGG + chr3_2:74446342-74446361 Msa0424240:CDS 50.0%
! TGTATTCACAGGGGAGTGTG+GGG + chr3_2:74446343-74446362 Msa0424240:CDS 50.0%
CTCAGCTGTGGAATATGCAC+AGG + chr3_2:74446587-74446606 Msa0424240:CDS 50.0%
TGCACAGGTATGAGCTGGTT+TGG + chr3_2:74446602-74446621 Msa0424240:intron 50.0%
! GCACAGGTATGAGCTGGTTT+GGG + chr3_2:74446603-74446622 Msa0424240:intron 50.0%
GCAACAGATGAACCGGGTTT+CGG - chr3_2:74447011-74447030 None:intergenic 50.0%
GCTGAAGGAGCAAGGATATC+TGG + chr3_2:74447153-74447172 Msa0424240:CDS 50.0%
!! TGAATGTACTGGGAGCATCC+AGG + chr3_2:74447537-74447556 Msa0424240:CDS 50.0%
!! TGGGGTGTTGCTGTACTTGT+TGG + chr3_2:74447684-74447703 Msa0424240:CDS 50.0%
CAGATGCATCATCCGAATGG+AGG + chr3_2:74448039-74448058 Msa0424240:three_prime_UTR 50.0%
CTGTTGAAGGAGTCCCTACT+AGG + chr3_2:74448083-74448102 Msa0424240:three_prime_UTR 50.0%
GTTGAAGGAGTCCCTACTAG+GGG + chr3_2:74448085-74448104 Msa0424240:three_prime_UTR 50.0%
!! GTTCCTTAAAGAGTGCCCCG+GGG - chr3_2:74444769-74444788 None:intergenic 55.0%
! TCAAATCCCAAAGGCGCAGC+TGG + chr3_2:74445006-74445025 Msa0424240:intron 55.0%
GGTCAGGTCATCAAGTGCAG+AGG + chr3_2:74445278-74445297 Msa0424240:CDS 55.0%
TATCTGCAGCTGCGGTTGCA+TGG + chr3_2:74445451-74445470 Msa0424240:intron 55.0%
ATCTGCAGCTGCGGTTGCAT+GGG + chr3_2:74445452-74445471 Msa0424240:intron 55.0%
TCCACTTCCTCCATCACCAG+CGG - chr3_2:74445489-74445508 None:intergenic 55.0%
! ATTGTGGAGAGCGTAGGCGA+GGG + chr3_2:74446284-74446303 Msa0424240:CDS 55.0%
CATGCCCTGCCTGTATTCAC+AGG + chr3_2:74446332-74446351 Msa0424240:CDS 55.0%
TGCCCTGCCTGTATTCACAG+GGG + chr3_2:74446334-74446353 Msa0424240:CDS 55.0%
CTCCCCTGTGAATACAGGCA+GGG - chr3_2:74446339-74446358 None:intergenic 55.0%
ACTCCCCTGTGAATACAGGC+AGG - chr3_2:74446340-74446359 None:intergenic 55.0%
CCACACTCCCCTGTGAATAC+AGG - chr3_2:74446344-74446363 None:intergenic 55.0%
CCTGTATTCACAGGGGAGTG+TGG + chr3_2:74446341-74446360 Msa0424240:CDS 55.0%
TTCAGGCTGCTGAAGGAGCA+AGG + chr3_2:74447145-74447164 Msa0424240:intron 55.0%
CGAAAGCTGAGATCATGGCC+TGG - chr3_2:74447558-74447577 None:intergenic 55.0%
!! GTTCCTTAAAGAGTGCCCCG+GGG - chr3_2:74444769-74444788 None:intergenic 55.0%
! TCAAATCCCAAAGGCGCAGC+TGG + chr3_2:74445006-74445025 Msa0424240:intron 55.0%
GGTCAGGTCATCAAGTGCAG+AGG + chr3_2:74445278-74445297 Msa0424240:CDS 55.0%
TATCTGCAGCTGCGGTTGCA+TGG + chr3_2:74445451-74445470 Msa0424240:intron 55.0%
ATCTGCAGCTGCGGTTGCAT+GGG + chr3_2:74445452-74445471 Msa0424240:intron 55.0%
TCCACTTCCTCCATCACCAG+CGG - chr3_2:74445489-74445508 None:intergenic 55.0%
! ATTGTGGAGAGCGTAGGCGA+GGG + chr3_2:74446284-74446303 Msa0424240:CDS 55.0%
CATGCCCTGCCTGTATTCAC+AGG + chr3_2:74446332-74446351 Msa0424240:CDS 55.0%
TGCCCTGCCTGTATTCACAG+GGG + chr3_2:74446334-74446353 Msa0424240:CDS 55.0%
CTCCCCTGTGAATACAGGCA+GGG - chr3_2:74446339-74446358 None:intergenic 55.0%
ACTCCCCTGTGAATACAGGC+AGG - chr3_2:74446340-74446359 None:intergenic 55.0%
CCACACTCCCCTGTGAATAC+AGG - chr3_2:74446344-74446363 None:intergenic 55.0%
CCTGTATTCACAGGGGAGTG+TGG + chr3_2:74446341-74446360 Msa0424240:CDS 55.0%
TTCAGGCTGCTGAAGGAGCA+AGG + chr3_2:74447145-74447164 Msa0424240:intron 55.0%
CGAAAGCTGAGATCATGGCC+TGG - chr3_2:74447558-74447577 None:intergenic 55.0%
! TGTCCCCGGGGCACTCTTTA+AGG + chr3_2:74444763-74444782 Msa0424240:intron 60.0%
!! GCTGGTGATGGAGGAAGTGG+AGG + chr3_2:74445488-74445507 Msa0424240:CDS 60.0%
!! GGTGATGGAGGAAGTGGAGG+TGG + chr3_2:74445491-74445510 Msa0424240:CDS 60.0%
!! AGACGGACTTCACCGGCTTG+TGG - chr3_2:74445522-74445541 None:intergenic 60.0%
! GATTGTGGAGAGCGTAGGCG+AGG + chr3_2:74446283-74446302 Msa0424240:CDS 60.0%
! TGTCCCCGGGGCACTCTTTA+AGG + chr3_2:74444763-74444782 Msa0424240:intron 60.0%
!! GCTGGTGATGGAGGAAGTGG+AGG + chr3_2:74445488-74445507 Msa0424240:CDS 60.0%
!! GGTGATGGAGGAAGTGGAGG+TGG + chr3_2:74445491-74445510 Msa0424240:CDS 60.0%
!! AGACGGACTTCACCGGCTTG+TGG - chr3_2:74445522-74445541 None:intergenic 60.0%
! GATTGTGGAGAGCGTAGGCG+AGG + chr3_2:74446283-74446302 Msa0424240:CDS 60.0%
TGCAGCTGCGGTTGCATGGG+AGG + chr3_2:74445455-74445474 Msa0424240:intron 65.0%
AGCTGCGGTTGCATGGGAGG+CGG + chr3_2:74445458-74445477 Msa0424240:intron 65.0%
!! GCCGCTGGTGATGGAGGAAG+TGG + chr3_2:74445485-74445504 Msa0424240:CDS 65.0%
!! CGGACTTCACCGGCTTGTGG+TGG - chr3_2:74445519-74445538 None:intergenic 65.0%
ACAGGCAGGGCATGATCCCC+TGG - chr3_2:74446326-74446345 None:intergenic 65.0%
TGCAGCTGCGGTTGCATGGG+AGG + chr3_2:74445455-74445474 Msa0424240:intron 65.0%
AGCTGCGGTTGCATGGGAGG+CGG + chr3_2:74445458-74445477 Msa0424240:intron 65.0%
!! GCCGCTGGTGATGGAGGAAG+TGG + chr3_2:74445485-74445504 Msa0424240:CDS 65.0%
!! CGGACTTCACCGGCTTGTGG+TGG - chr3_2:74445519-74445538 None:intergenic 65.0%
ACAGGCAGGGCATGATCCCC+TGG - chr3_2:74446326-74446345 None:intergenic 65.0%
GCTGCGGTTGCATGGGAGGC+GGG + chr3_2:74445459-74445478 Msa0424240:intron 70.0%
CTGCGGTTGCATGGGAGGCG+GGG + chr3_2:74445460-74445479 Msa0424240:CDS 70.0%
!! GGGGAAGCCGCTGGTGATGG+AGG + chr3_2:74445479-74445498 Msa0424240:CDS 70.0%
GAGGTGGCGCCACCACAAGC+CGG + chr3_2:74445507-74445526 Msa0424240:CDS 70.0%
GCTGCGGTTGCATGGGAGGC+GGG + chr3_2:74445459-74445478 Msa0424240:intron 70.0%
CTGCGGTTGCATGGGAGGCG+GGG + chr3_2:74445460-74445479 Msa0424240:CDS 70.0%
!! GGGGAAGCCGCTGGTGATGG+AGG + chr3_2:74445479-74445498 Msa0424240:CDS 70.0%
GAGGTGGCGCCACCACAAGC+CGG + chr3_2:74445507-74445526 Msa0424240:CDS 70.0%
ATGGGAGGCGGGGAAGCCGC+TGG + chr3_2:74445470-74445489 Msa0424240:CDS 75.0%
GGCGGGGAAGCCGCTGGTGA+TGG + chr3_2:74445476-74445495 Msa0424240:CDS 75.0%
ATGGGAGGCGGGGAAGCCGC+TGG + chr3_2:74445470-74445489 Msa0424240:CDS 75.0%
GGCGGGGAAGCCGCTGGTGA+TGG + chr3_2:74445476-74445495 Msa0424240:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 74444242 74448353 74444242 ID=Msa0424240;Name=Msa0424240
chr3_2 mRNA 74444242 74448353 74444242 ID=Msa0424240-mRNA-1;Parent=Msa0424240;Name=Msa0424240-mRNA-1;_AED=0.09;_eAED=0.09;_QI=212|1|1|1|0.9|0.90|11|328|365
chr3_2 exon 74444242 74444392 74444242 ID=Msa0424240-mRNA-1:exon:18730;Parent=Msa0424240-mRNA-1
chr3_2 exon 74445202 74445299 74445202 ID=Msa0424240-mRNA-1:exon:18731;Parent=Msa0424240-mRNA-1
chr3_2 exon 74445460 74445596 74445460 ID=Msa0424240-mRNA-1:exon:18732;Parent=Msa0424240-mRNA-1
chr3_2 exon 74445854 74445900 74445854 ID=Msa0424240-mRNA-1:exon:18733;Parent=Msa0424240-mRNA-1
chr3_2 exon 74446283 74446608 74446283 ID=Msa0424240-mRNA-1:exon:18734;Parent=Msa0424240-mRNA-1
chr3_2 exon 74446979 74447061 74446979 ID=Msa0424240-mRNA-1:exon:18735;Parent=Msa0424240-mRNA-1
chr3_2 exon 74447150 74447225 74447150 ID=Msa0424240-mRNA-1:exon:18736;Parent=Msa0424240-mRNA-1
chr3_2 exon 74447316 74447377 74447316 ID=Msa0424240-mRNA-1:exon:18737;Parent=Msa0424240-mRNA-1
chr3_2 exon 74447496 74447591 74447496 ID=Msa0424240-mRNA-1:exon:18738;Parent=Msa0424240-mRNA-1
chr3_2 exon 74447681 74447842 74447681 ID=Msa0424240-mRNA-1:exon:18739;Parent=Msa0424240-mRNA-1
chr3_2 exon 74447954 74448353 74447954 ID=Msa0424240-mRNA-1:exon:18740;Parent=Msa0424240-mRNA-1
chr3_2 five_prime_UTR 74444242 74444392 74444242 ID=Msa0424240-mRNA-1:five_prime_utr;Parent=Msa0424240-mRNA-1
chr3_2 five_prime_UTR 74445202 74445262 74445202 ID=Msa0424240-mRNA-1:five_prime_utr;Parent=Msa0424240-mRNA-1
chr3_2 CDS 74445263 74445299 74445263 ID=Msa0424240-mRNA-1:cds;Parent=Msa0424240-mRNA-1
chr3_2 CDS 74445460 74445596 74445460 ID=Msa0424240-mRNA-1:cds;Parent=Msa0424240-mRNA-1
chr3_2 CDS 74445854 74445900 74445854 ID=Msa0424240-mRNA-1:cds;Parent=Msa0424240-mRNA-1
chr3_2 CDS 74446283 74446608 74446283 ID=Msa0424240-mRNA-1:cds;Parent=Msa0424240-mRNA-1
chr3_2 CDS 74446979 74447061 74446979 ID=Msa0424240-mRNA-1:cds;Parent=Msa0424240-mRNA-1
chr3_2 CDS 74447150 74447225 74447150 ID=Msa0424240-mRNA-1:cds;Parent=Msa0424240-mRNA-1
chr3_2 CDS 74447316 74447377 74447316 ID=Msa0424240-mRNA-1:cds;Parent=Msa0424240-mRNA-1
chr3_2 CDS 74447496 74447591 74447496 ID=Msa0424240-mRNA-1:cds;Parent=Msa0424240-mRNA-1
chr3_2 CDS 74447681 74447842 74447681 ID=Msa0424240-mRNA-1:cds;Parent=Msa0424240-mRNA-1
chr3_2 CDS 74447954 74448025 74447954 ID=Msa0424240-mRNA-1:cds;Parent=Msa0424240-mRNA-1
chr3_2 three_prime_UTR 74448026 74448353 74448026 ID=Msa0424240-mRNA-1:three_prime_utr;Parent=Msa0424240-mRNA-1
Gene Sequence

>Msa0424240

ATGTCGAACACTGTTGGTCAGGTCATCAAGTGCAGAGCTGCGGTTGCATGGGAGGCGGGGAAGCCGCTGGTGATGGAGGAAGTGGAGGTGGCGCCACCACAAGCCGGTGAAGTCCGTCTCAAGATACTCTTCACCTCCCTTTGTCATACTGATGTTTACTTCTGGGAAGCTAAGGGTCAAACTCCATTGTTTCCTCGTATTTTTGGTCATGAAGCTGGAGGGATTGTGGAGAGCGTAGGCGAGGGTGTGACACATCTAAAACCAGGGGATCATGCCCTGCCTGTATTCACAGGGGAGTGTGGGGACTGTCCACATTGTAAGTCAGAGGAGAGCAACATGTGTGATCTTCTTAGGATCAACACTGACAGGGGTGTCATGATCAATGACAATCAGTCAAGATTCTCTATTAAGGGACAGCCCATTCATCATTTCGTCGGCACATCGACATTCAGTGAATATACTGTTGTTCATGCTGGATGTGTTGCAAAGATCAACCCTGATGCACCACTTGACAAAGTTTGTATTCTCAGCTGTGGAATATGCACAGGTCTTGGTGCTACCATCAATGTTGCTAAGCCGAAACCCGGTTCATCTGTTGCTATCTTTGGACTTGGAGCTGTTGGCCTTGCTGCTGCTGAAGGAGCAAGGATATCTGGTGCATCAAGAATCATTGGAGTCGATTTAGTTTCTAGCCGATTTGAATTAGCTAAGAAGTTTGGGGTAAATGAGTTTGTGAACCCAAAAGATCATGACAAACCCGTACAACAGGTAATTGCTGAAATGACAAATGGAGGTGTGGATCGTGCTGTTGAATGTACTGGGAGCATCCAGGCCATGATCTCAGCTTTCGAATGTGTCCACGATGGTTGGGGTGTTGCTGTACTTGTTGGAGTTCCAAACAAAGATGATGCATTCAAAACTCACCCTATGAATTTGTTGAATGAAAGGACTCTTAAGGGTACCTTTTATGGTAACTACAAACCCCGCACTGATCTTCCTAATGTTGTAGAGAAGTACATGAAAGGGGAGCTGGAACTTGAGAAATTCATCACTCAATTCCATTTTCAGAGATTAACAAAGCTTTTGATTACATGCTGA

Protein sequence

>Msa0424240

MSNTVGQVIKCRAAVAWEAGKPLVMEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGDCPHCKSEESNMCDLLRINTDRGVMINDNQSRFSIKGQPIHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITQFHFQRLTKLLITC*