Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379250 | XP_003602129.1 | 99.474 | 380 | 2 | 0 | 1 | 380 | 1 | 380 | 0.0 | 783 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379250 | sp|P12886|ADH1_PEA | 95.789 | 380 | 16 | 0 | 1 | 380 | 1 | 380 | 0.0 | 765 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379250 | G7J5M6 | 99.474 | 380 | 2 | 0 | 1 | 380 | 1 | 380 | 0.0 | 783 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018870 | Msa1379250 | -0.808744 | 2.664549e-50 | -8.615850e-47 |
| Msa0036550 | Msa1379250 | 0.848387 | 6.331089e-60 | -8.615850e-47 |
| Msa0036580 | Msa1379250 | 0.856972 | 2.240255e-62 | -8.615850e-47 |
| Msa0039270 | Msa1379250 | 0.845181 | 4.765612e-59 | -8.615850e-47 |
| Msa0043840 | Msa1379250 | 0.828598 | 8.223283e-55 | -8.615850e-47 |
| Msa0046430 | Msa1379250 | 0.817328 | 3.490485e-52 | -8.615850e-47 |
| Msa0049990 | Msa1379250 | -0.800012 | 1.759479e-48 | -8.615850e-47 |
| Msa0054760 | Msa1379250 | -0.809050 | 2.291648e-50 | -8.615850e-47 |
| Msa0057740 | Msa1379250 | -0.805461 | 1.320457e-49 | -8.615850e-47 |
| Msa0061600 | Msa1379250 | 0.802884 | 4.539674e-49 | -8.615850e-47 |
| Msa0084390 | Msa1379250 | 0.832738 | 7.966116e-56 | -8.615850e-47 |
| Msa0085710 | Msa1379250 | 0.808915 | 2.448965e-50 | -8.615850e-47 |
| Msa0090500 | Msa1379250 | 0.845011 | 5.299463e-59 | -8.615850e-47 |
| Msa0103060 | Msa1379250 | -0.804179 | 2.445559e-49 | -8.615850e-47 |
| Msa1350490 | Msa1379250 | 0.812267 | 4.619061e-51 | -8.615850e-47 |
| Msa1363690 | Msa1379250 | 0.824469 | 7.935022e-54 | -8.615850e-47 |
| Msa1366400 | Msa1379250 | -0.809195 | 2.133635e-50 | -8.615850e-47 |
| Msa1370930 | Msa1379250 | 0.818070 | 2.374330e-52 | -8.615850e-47 |
| Msa1377460 | Msa1379250 | 0.803251 | 3.811749e-49 | -8.615850e-47 |
| Msa1378950 | Msa1379250 | 0.836934 | 6.992188e-57 | -8.615850e-47 |
| Msa1379250 | Msa1390040 | 0.809782 | 1.596313e-50 | -8.615850e-47 |
| Msa1379250 | Msa1395580 | -0.811001 | 8.709132e-51 | -8.615850e-47 |
| Msa1379250 | Msa1395690 | 0.860965 | 1.429658e-63 | -8.615850e-47 |
| Msa1379250 | Msa1395720 | 0.836569 | 8.665517e-57 | -8.615850e-47 |
| Msa1379250 | Msa1396310 | -0.809610 | 1.737547e-50 | -8.615850e-47 |
| Msa1379250 | Msa1396550 | 0.830842 | 2.338061e-55 | -8.615850e-47 |
| Msa1379250 | Msa1397080 | 0.800690 | 1.280618e-48 | -8.615850e-47 |
| Msa1379250 | Msa1400700 | 0.825715 | 4.029729e-54 | -8.615850e-47 |
| Msa1379250 | Msa1402000 | 0.828169 | 1.044129e-54 | -8.615850e-47 |
| Msa1379250 | Msa1406230 | -0.812066 | 5.111932e-51 | -8.615850e-47 |
| Msa1379250 | Msa1407210 | 0.873666 | 1.231706e-67 | -8.615850e-47 |
| Msa1379250 | Msa1418190 | 0.805127 | 1.551070e-49 | -8.615850e-47 |
| Msa1379250 | Msa1423550 | -0.837291 | 5.668425e-57 | -8.615850e-47 |
| Msa1379250 | Msa1428990 | -0.806315 | 8.731195e-50 | -8.615850e-47 |
| Msa1379250 | Msa1434700 | 0.802086 | 6.627855e-49 | -8.615850e-47 |
| Msa1379250 | Msa1445780 | 0.826325 | 2.886753e-54 | -8.615850e-47 |
| Msa1379250 | Msa1449600 | -0.829284 | 5.609231e-55 | -8.615850e-47 |
| Msa1379250 | Msa1450130 | 0.819483 | 1.134100e-52 | -8.615850e-47 |
| Msa1379250 | Msa1456830 | -0.840156 | 1.030271e-57 | -8.615850e-47 |
| Msa0645120 | Msa1379250 | 0.869490 | 2.977329e-66 | -8.615850e-47 |
| Msa0668210 | Msa1379250 | 0.826353 | 2.842670e-54 | -8.615850e-47 |
| Msa0668230 | Msa1379250 | 0.800769 | 1.233975e-48 | -8.615850e-47 |
| Msa0672780 | Msa1379250 | 0.810711 | 1.006170e-50 | -8.615850e-47 |
| Msa0684590 | Msa1379250 | 0.807608 | 4.651086e-50 | -8.615850e-47 |
| Msa0684600 | Msa1379250 | 0.818149 | 2.278298e-52 | -8.615850e-47 |
| Msa0715260 | Msa1379250 | 0.852587 | 4.186474e-61 | -8.615850e-47 |
| Msa0716600 | Msa1379250 | 0.888454 | 5.822390e-73 | -8.615850e-47 |
| Msa0716670 | Msa1379250 | -0.800911 | 1.153906e-48 | -8.615850e-47 |
| Msa0735340 | Msa1379250 | 0.812510 | 4.089616e-51 | -8.615850e-47 |
| Msa0747500 | Msa1379250 | 0.823211 | 1.565061e-53 | -8.615850e-47 |
| Msa0752290 | Msa1379250 | -0.802196 | 6.293319e-49 | -8.615850e-47 |
| Msa0756570 | Msa1379250 | 0.831548 | 1.568344e-55 | -8.615850e-47 |
| Msa0757240 | Msa1379250 | 0.850055 | 2.174694e-60 | -8.615850e-47 |
| Msa0757990 | Msa1379250 | 0.819050 | 1.423418e-52 | -8.615850e-47 |
| Msa0758000 | Msa1379250 | 0.828828 | 7.234264e-55 | -8.615850e-47 |
| Msa0758150 | Msa1379250 | 0.833786 | 4.367048e-56 | -8.615850e-47 |
| Msa0793060 | Msa1379250 | -0.819668 | 1.029043e-52 | -8.615850e-47 |
| Msa0798230 | Msa1379250 | 0.851183 | 1.047969e-60 | -8.615850e-47 |
| Msa0813630 | Msa1379250 | -0.805619 | 1.223002e-49 | -8.615850e-47 |
| Msa0817100 | Msa1379250 | 0.843740 | 1.163233e-58 | -8.615850e-47 |
| Msa0836740 | Msa1379250 | 0.852665 | 3.976997e-61 | -8.615850e-47 |
| Msa0128340 | Msa1379250 | 0.811357 | 7.291776e-51 | -8.615850e-47 |
| Msa0129270 | Msa1379250 | 0.845660 | 3.536039e-59 | -8.615850e-47 |
| Msa0130710 | Msa1379250 | 0.856675 | 2.740902e-62 | -8.615850e-47 |
| Msa0137970 | Msa1379250 | 0.844749 | 6.233589e-59 | -8.615850e-47 |
| Msa0139270 | Msa1379250 | 0.867278 | 1.539202e-65 | -8.615850e-47 |
| Msa0173260 | Msa1379250 | 0.805920 | 1.057318e-49 | -8.615850e-47 |
| Msa0176600 | Msa1379250 | 0.846991 | 1.533921e-59 | -8.615850e-47 |
| Msa0176620 | Msa1379250 | 0.860224 | 2.397156e-63 | -8.615850e-47 |
| Msa0182840 | Msa1379250 | 0.808177 | 3.519787e-50 | -8.615850e-47 |
| Msa0183920 | Msa1379250 | 0.838902 | 2.181714e-57 | -8.615850e-47 |
| Msa0202060 | Msa1379250 | 0.808957 | 2.398907e-50 | -8.615850e-47 |
| Msa0203820 | Msa1379250 | 0.830024 | 3.707141e-55 | -8.615850e-47 |
| Msa0218860 | Msa1379250 | -0.805334 | 1.403277e-49 | -8.615850e-47 |
| Msa0222070 | Msa1379250 | -0.804346 | 2.257170e-49 | -8.615850e-47 |
| Msa0222120 | Msa1379250 | -0.802664 | 5.040443e-49 | -8.615850e-47 |
| Msa0225910 | Msa1379250 | 0.832075 | 1.162556e-55 | -8.615850e-47 |
| Msa0227290 | Msa1379250 | -0.812706 | 3.705278e-51 | -8.615850e-47 |
| Msa0234120 | Msa1379250 | 0.833300 | 5.771154e-56 | -8.615850e-47 |
| Msa1258100 | Msa1379250 | -0.809011 | 2.336186e-50 | -8.615850e-47 |
| Msa1265500 | Msa1379250 | 0.836459 | 9.241630e-57 | -8.615850e-47 |
| Msa1266710 | Msa1379250 | 0.882770 | 7.884305e-71 | -8.615850e-47 |
| Msa1275840 | Msa1379250 | 0.803631 | 3.179835e-49 | -8.615850e-47 |
| Msa1298740 | Msa1379250 | -0.823435 | 1.387261e-53 | -8.615850e-47 |
| Msa1299310 | Msa1379250 | 0.862441 | 5.057310e-64 | -8.615850e-47 |
| Msa1329360 | Msa1379250 | 0.819561 | 1.088523e-52 | -8.615850e-47 |
| Msa1329570 | Msa1379250 | 0.814037 | 1.888754e-51 | -8.615850e-47 |
| Msa1329770 | Msa1379250 | 0.830692 | 2.544583e-55 | -8.615850e-47 |
| Msa1335500 | Msa1379250 | 0.852633 | 4.060370e-61 | -8.615850e-47 |
| Msa0375500 | Msa1379250 | 0.818061 | 2.385252e-52 | -8.615850e-47 |
| Msa0375550 | Msa1379250 | 0.921032 | 6.013790e-88 | -8.615850e-47 |
| Msa0378390 | Msa1379250 | 0.816676 | 4.891236e-52 | -8.615850e-47 |
| Msa0381950 | Msa1379250 | 0.833475 | 5.222024e-56 | -8.615850e-47 |
| Msa0424240 | Msa1379250 | 0.974715 | 1.201296e-138 | -8.615850e-47 |
| Msa0424300 | Msa1379250 | 0.869880 | 2.221335e-66 | -8.615850e-47 |
| Msa0425390 | Msa1379250 | 0.806054 | 9.911223e-50 | -8.615850e-47 |
| Msa0427590 | Msa1379250 | -0.820559 | 6.433710e-53 | -8.615850e-47 |
| Msa0427740 | Msa1379250 | 0.832356 | 9.904356e-56 | -8.615850e-47 |
| Msa0427970 | Msa1379250 | 0.826648 | 2.416890e-54 | -8.615850e-47 |
| Msa0463540 | Msa1379250 | -0.816259 | 6.063885e-52 | -8.615850e-47 |
| Msa0467800 | Msa1379250 | -0.805135 | 1.545267e-49 | -8.615850e-47 |
| Msa0467880 | Msa1379250 | -0.805089 | 1.579397e-49 | -8.615850e-47 |
| Msa0471210 | Msa1379250 | 0.851417 | 8.998086e-61 | -8.615850e-47 |
| Msa0476420 | Msa1379250 | 0.859044 | 5.428483e-63 | -8.615850e-47 |
| Msa0478400 | Msa1379250 | 0.975447 | 5.715541e-140 | -8.615850e-47 |
| Msa0482020 | Msa1379250 | -0.816480 | 5.410496e-52 | -8.615850e-47 |
| Msa0985250 | Msa1379250 | 0.877460 | 6.174740e-69 | -8.615850e-47 |
| Msa0985260 | Msa1379250 | 0.851598 | 7.997660e-61 | -8.615850e-47 |
| Msa0985290 | Msa1379250 | 0.845668 | 3.518363e-59 | -8.615850e-47 |
| Msa0987550 | Msa1379250 | 0.846108 | 2.671161e-59 | -8.615850e-47 |
| Msa0996940 | Msa1379250 | 0.822487 | 2.307661e-53 | -8.615850e-47 |
| Msa1001780 | Msa1379250 | -0.807487 | 4.934601e-50 | -8.615850e-47 |
| Msa1003120 | Msa1379250 | 0.802308 | 5.968266e-49 | -8.615850e-47 |
| Msa1011320 | Msa1379250 | 0.809869 | 1.528574e-50 | -8.615850e-47 |
| Msa1011350 | Msa1379250 | 0.837377 | 5.388634e-57 | -8.615850e-47 |
| Msa1030430 | Msa1379250 | -0.805881 | 1.077490e-49 | -8.615850e-47 |
| Msa1036590 | Msa1379250 | 0.806159 | 9.420186e-50 | -8.615850e-47 |
| Msa1037060 | Msa1379250 | 0.821750 | 3.419352e-53 | -8.615850e-47 |
| Msa1046220 | Msa1379250 | 0.856806 | 2.507971e-62 | -8.615850e-47 |
| Msa1061780 | Msa1379250 | 0.807581 | 4.713970e-50 | -8.615850e-47 |
| Msa1067910 | Msa1379250 | -0.817842 | 2.673286e-52 | -8.615850e-47 |
| Msa1069440 | Msa1379250 | -0.819379 | 1.198078e-52 | -8.615850e-47 |
| Msa1074630 | Msa1379250 | -0.804567 | 2.030038e-49 | -8.615850e-47 |
| Msa1076900 | Msa1379250 | 0.809243 | 2.083842e-50 | -8.615850e-47 |
| Msa1077940 | Msa1379250 | 0.809152 | 2.179599e-50 | -8.615850e-47 |
| Msa1083100 | Msa1379250 | 0.831980 | 1.227342e-55 | -8.615850e-47 |
| Msa1085560 | Msa1379250 | 0.801104 | 1.053651e-48 | -8.615850e-47 |
| Msa1100560 | Msa1379250 | 0.801175 | 1.019386e-48 | -8.615850e-47 |
| Msa0263620 | Msa1379250 | -0.804750 | 1.859714e-49 | -8.615850e-47 |
| Msa0265990 | Msa1379250 | 0.808814 | 2.573624e-50 | -8.615850e-47 |
| Msa0266640 | Msa1379250 | 0.837176 | 6.064812e-57 | -8.615850e-47 |
| Msa0266650 | Msa1379250 | 0.801637 | 8.195312e-49 | -8.615850e-47 |
| Msa0275570 | Msa1379250 | 0.812129 | 4.952155e-51 | -8.615850e-47 |
| Msa0301460 | Msa1379250 | -0.828076 | 1.098845e-54 | -8.615850e-47 |
| Msa0303930 | Msa1379250 | 0.812979 | 3.227150e-51 | -8.615850e-47 |
| Msa0318370 | Msa1379250 | 0.850122 | 2.082143e-60 | -8.615850e-47 |
| Msa0324200 | Msa1379250 | 0.821184 | 4.621801e-53 | -8.615850e-47 |
| Msa0336640 | Msa1379250 | 0.821445 | 4.021897e-53 | -8.615850e-47 |
| Msa0356200 | Msa1379250 | 0.812508 | 4.092008e-51 | -8.615850e-47 |
| Msa0356250 | Msa1379250 | 0.800829 | 1.199572e-48 | -8.615850e-47 |
| Msa0356410 | Msa1379250 | 0.807353 | 5.267686e-50 | -8.615850e-47 |
| Msa1107320 | Msa1379250 | 0.800068 | 1.713925e-48 | -8.615850e-47 |
| Msa1126910 | Msa1379250 | -0.814154 | 1.779831e-51 | -8.615850e-47 |
| Msa1130730 | Msa1379250 | -0.801399 | 9.172188e-49 | -8.615850e-47 |
| Msa1133850 | Msa1379250 | 0.801370 | 9.298809e-49 | -8.615850e-47 |
| Msa1138600 | Msa1379250 | -0.816557 | 5.201377e-52 | -8.615850e-47 |
| Msa1142850 | Msa1379250 | 0.802355 | 5.835031e-49 | -8.615850e-47 |
| Msa1142860 | Msa1379250 | 0.825048 | 5.796527e-54 | -8.615850e-47 |
| Msa1150880 | Msa1379250 | 0.821974 | 3.035149e-53 | -8.615850e-47 |
| Msa1164800 | Msa1379250 | 0.814906 | 1.213279e-51 | -8.615850e-47 |
| Msa1166020 | Msa1379250 | -0.813253 | 2.811004e-51 | -8.615850e-47 |
| Msa1173290 | Msa1379250 | 0.824825 | 6.542691e-54 | -8.615850e-47 |
| Msa1204590 | Msa1379250 | 0.810801 | 9.623404e-51 | -8.615850e-47 |
| Msa1204760 | Msa1379250 | 0.815909 | 7.260318e-52 | -8.615850e-47 |
| Msa1209390 | Msa1379250 | -0.815464 | 9.122245e-52 | -8.615850e-47 |
| Msa1209650 | Msa1379250 | -0.811156 | 8.061234e-51 | -8.615850e-47 |
| Msa1211160 | Msa1379250 | 0.856036 | 4.219021e-62 | -8.615850e-47 |
| Msa1211320 | Msa1379250 | 0.822491 | 2.303001e-53 | -8.615850e-47 |
| Msa1216120 | Msa1379250 | 0.803700 | 3.075385e-49 | -8.615850e-47 |
| Msa1219780 | Msa1379250 | 0.881008 | 3.429345e-70 | -8.615850e-47 |
| Msa1221170 | Msa1379250 | 0.844835 | 5.909537e-59 | -8.615850e-47 |
| Msa1222030 | Msa1379250 | 0.855280 | 7.015687e-62 | -8.615850e-47 |
| Msa0500490 | Msa1379250 | -0.806940 | 6.443000e-50 | -8.615850e-47 |
| Msa0515930 | Msa1379250 | 0.866465 | 2.795849e-65 | -8.615850e-47 |
| Msa0518160 | Msa1379250 | -0.825827 | 3.789814e-54 | -8.615850e-47 |
| Msa0518570 | Msa1379250 | 0.831536 | 1.578771e-55 | -8.615850e-47 |
| Msa0520430 | Msa1379250 | 0.858659 | 7.080023e-63 | -8.615850e-47 |
| Msa0533510 | Msa1379250 | 0.835574 | 1.550575e-56 | -8.615850e-47 |
| Msa0533520 | Msa1379250 | 0.807325 | 5.341354e-50 | -8.615850e-47 |
| Msa0538520 | Msa1379250 | 0.802264 | 6.093848e-49 | -8.615850e-47 |
| Msa0548760 | Msa1379250 | 0.852635 | 4.056696e-61 | -8.615850e-47 |
| Msa0581190 | Msa1379250 | -0.816716 | 4.790523e-52 | -8.615850e-47 |
| Msa0589720 | Msa1379250 | 0.821916 | 3.130037e-53 | -8.615850e-47 |
| Msa0589730 | Msa1379250 | 0.815989 | 6.966158e-52 | -8.615850e-47 |
| Msa0876230 | Msa1379250 | 0.805783 | 1.129931e-49 | -8.615850e-47 |
| Msa0883610 | Msa1379250 | 0.856611 | 2.861509e-62 | -8.615850e-47 |
| Msa0886370 | Msa1379250 | 0.865022 | 7.982878e-65 | -8.615850e-47 |
| Msa0896990 | Msa1379250 | 0.827201 | 1.783095e-54 | -8.615850e-47 |
| Msa0910570 | Msa1379250 | 0.831502 | 1.609740e-55 | -8.615850e-47 |
| Msa0910590 | Msa1379250 | 0.847893 | 8.666848e-60 | -8.615850e-47 |
| Msa0913500 | Msa1379250 | 0.853571 | 2.188202e-61 | -8.615850e-47 |
| Msa0931370 | Msa1379250 | 0.818272 | 2.137212e-52 | -8.615850e-47 |
| Msa0932930 | Msa1379250 | 0.803486 | 3.406605e-49 | -8.615850e-47 |
| Msa0941520 | Msa1379250 | 0.810213 | 1.288916e-50 | -8.615850e-47 |
| Msa0948430 | Msa1379250 | 0.841097 | 5.841896e-58 | -8.615850e-47 |
| Msa0951060 | Msa1379250 | 0.875602 | 2.708118e-68 | -8.615850e-47 |
| Msa0962260 | Msa1379250 | 0.823370 | 1.437033e-53 | -8.615850e-47 |
| Msa0978530 | Msa1379250 | 0.825299 | 5.057073e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379250 | MtrunA17_Chr3g0125911 | 99.474 | 380 | 2 | 0 | 1 | 380 | 1 | 380 | 0.0 | 783 |
| Msa1379250 | MtrunA17_Chr3g0125961 | 97.632 | 380 | 9 | 0 | 1 | 380 | 1 | 380 | 0.0 | 775 |
| Msa1379250 | MtrunA17_Chr3g0125941 | 97.625 | 379 | 9 | 0 | 2 | 380 | 3 | 381 | 0.0 | 767 |
| Msa1379250 | MtrunA17_Chr7g0262421 | 58.886 | 377 | 155 | 0 | 2 | 378 | 3 | 379 | 3.33e-170 | 480 |
| Msa1379250 | MtrunA17_Chr1g0183131 | 56.915 | 376 | 162 | 0 | 3 | 378 | 2 | 377 | 3.66e-165 | 467 |
| Msa1379250 | MtrunA17_Chr6g0478081 | 51.715 | 379 | 179 | 2 | 2 | 380 | 3 | 377 | 7.18e-144 | 413 |
| Msa1379250 | MtrunA17_Chr7g0242291 | 48.825 | 383 | 190 | 5 | 1 | 378 | 12 | 393 | 1.44e-127 | 372 |
| Msa1379250 | MtrunA17_Chr5g0440521 | 45.812 | 382 | 203 | 4 | 2 | 380 | 11 | 391 | 1.71e-121 | 357 |
| Msa1379250 | MtrunA17_Chr3g0132351 | 50.132 | 379 | 183 | 4 | 6 | 379 | 13 | 390 | 4.27e-121 | 355 |
| Msa1379250 | MtrunA17_Chr3g0118441 | 43.832 | 381 | 210 | 4 | 2 | 379 | 6 | 385 | 9.60e-111 | 329 |
| Msa1379250 | MtrunA17_Chr7g0242301 | 44.693 | 358 | 161 | 5 | 25 | 378 | 1 | 325 | 6.12e-103 | 307 |
| Msa1379250 | MtrunA17_Chr4g0021211 | 39.842 | 379 | 218 | 5 | 3 | 378 | 27 | 398 | 4.45e-91 | 279 |
| Msa1379250 | MtrunA17_Chr5g0419681 | 39.211 | 380 | 223 | 6 | 1 | 378 | 1 | 374 | 3.32e-89 | 273 |
| Msa1379250 | MtrunA17_Chr3g0118431 | 43.590 | 273 | 150 | 4 | 101 | 370 | 19 | 290 | 9.39e-73 | 228 |
| Msa1379250 | MtrunA17_Chr8g0385221 | 31.053 | 380 | 239 | 15 | 12 | 378 | 55 | 424 | 3.63e-44 | 158 |
| Msa1379250 | MtrunA17_Chr6g0474141 | 25.405 | 370 | 224 | 13 | 16 | 369 | 19 | 352 | 7.12e-22 | 95.9 |
| Msa1379250 | MtrunA17_Chr5g0411801 | 23.913 | 368 | 237 | 14 | 12 | 370 | 43 | 376 | 1.07e-13 | 72.0 |
| Msa1379250 | MtrunA17_Chr4g0064291 | 25.369 | 339 | 215 | 9 | 37 | 370 | 39 | 344 | 8.32e-13 | 68.9 |
| Msa1379250 | MtrunA17_Chr5g0411931 | 24.189 | 339 | 219 | 9 | 37 | 370 | 39 | 344 | 1.44e-12 | 68.2 |
| Msa1379250 | MtrunA17_Chr5g0411821 | 23.894 | 339 | 220 | 10 | 37 | 370 | 39 | 344 | 9.11e-12 | 66.2 |
| Msa1379250 | MtrunA17_Chr1g0157021 | 22.599 | 354 | 207 | 10 | 37 | 370 | 38 | 344 | 2.20e-11 | 64.7 |
| Msa1379250 | MtrunA17_Chr5g0411811 | 24.702 | 336 | 221 | 10 | 37 | 370 | 39 | 344 | 3.17e-11 | 64.3 |
| Msa1379250 | MtrunA17_Chr5g0411911 | 22.321 | 336 | 229 | 7 | 37 | 370 | 41 | 346 | 3.94e-11 | 63.9 |
| Msa1379250 | MtrunA17_Chr5g0411881 | 25.641 | 273 | 175 | 8 | 3 | 267 | 2 | 254 | 8.40e-11 | 62.8 |
| Msa1379250 | MtrunA17_Chr5g0411841 | 22.255 | 337 | 228 | 10 | 37 | 370 | 39 | 344 | 9.85e-11 | 62.8 |
| Msa1379250 | MtrunA17_Chr5g0411791 | 23.964 | 338 | 221 | 11 | 37 | 370 | 13 | 318 | 9.88e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379250 | AT1G77120.1 | 84.574 | 376 | 58 | 0 | 3 | 378 | 2 | 377 | 0.0 | 674 |
| Msa1379250 | AT5G43940.1 | 58.556 | 374 | 155 | 0 | 3 | 376 | 2 | 375 | 7.72e-168 | 474 |
| Msa1379250 | AT5G43940.2 | 56.477 | 386 | 156 | 1 | 3 | 376 | 2 | 387 | 7.31e-164 | 464 |
| Msa1379250 | AT5G24760.1 | 52.151 | 372 | 174 | 2 | 7 | 378 | 12 | 379 | 1.11e-146 | 421 |
| Msa1379250 | AT1G64710.1 | 49.735 | 378 | 187 | 2 | 4 | 378 | 3 | 380 | 1.16e-141 | 408 |
| Msa1379250 | AT1G32780.1 | 50.000 | 390 | 185 | 2 | 1 | 380 | 1 | 390 | 1.44e-141 | 408 |
| Msa1379250 | AT5G24760.2 | 50.847 | 354 | 170 | 2 | 25 | 378 | 1 | 350 | 1.46e-135 | 391 |
| Msa1379250 | AT5G24760.3 | 50.847 | 354 | 170 | 2 | 25 | 378 | 1 | 350 | 1.46e-135 | 391 |
| Msa1379250 | AT1G64710.2 | 48.179 | 357 | 182 | 2 | 25 | 378 | 1 | 357 | 2.54e-129 | 375 |
| Msa1379250 | AT5G42250.1 | 47.185 | 373 | 194 | 3 | 9 | 378 | 17 | 389 | 3.59e-120 | 353 |
| Msa1379250 | AT1G22440.1 | 49.096 | 387 | 184 | 6 | 2 | 380 | 5 | 386 | 3.13e-119 | 351 |
| Msa1379250 | AT1G22430.2 | 47.258 | 383 | 199 | 3 | 1 | 380 | 6 | 388 | 4.32e-117 | 345 |
| Msa1379250 | AT1G22430.1 | 47.258 | 383 | 199 | 3 | 1 | 380 | 6 | 388 | 4.32e-117 | 345 |
| Msa1379250 | AT4G22110.2 | 47.244 | 381 | 192 | 4 | 6 | 380 | 12 | 389 | 2.85e-114 | 338 |
| Msa1379250 | AT4G22110.1 | 47.244 | 381 | 192 | 4 | 6 | 380 | 12 | 389 | 2.85e-114 | 338 |
| Msa1379250 | AT1G64710.3 | 47.059 | 306 | 160 | 1 | 75 | 378 | 6 | 311 | 6.89e-107 | 317 |
| Msa1379250 | AT5G24760.4 | 46.992 | 266 | 140 | 1 | 113 | 378 | 1 | 265 | 2.95e-92 | 278 |
| Msa1379250 | AT1G22430.3 | 51.049 | 286 | 137 | 3 | 1 | 283 | 6 | 291 | 8.85e-91 | 276 |
| Msa1379250 | AT1G22430.4 | 52.610 | 249 | 116 | 2 | 1 | 247 | 6 | 254 | 2.74e-82 | 253 |
| Msa1379250 | AT1G22430.5 | 52.610 | 249 | 116 | 2 | 1 | 247 | 6 | 254 | 2.74e-82 | 253 |
| Msa1379250 | AT4G22110.3 | 52.439 | 246 | 109 | 3 | 6 | 246 | 12 | 254 | 1.88e-77 | 240 |
| Msa1379250 | AT5G63620.1 | 30.027 | 373 | 239 | 13 | 12 | 372 | 57 | 419 | 1.08e-39 | 146 |
| Msa1379250 | AT5G63620.2 | 29.380 | 371 | 244 | 11 | 12 | 372 | 57 | 419 | 3.14e-39 | 145 |
| Msa1379250 | AT5G63620.3 | 29.719 | 249 | 162 | 7 | 12 | 251 | 57 | 301 | 6.76e-28 | 112 |
| Msa1379250 | AT5G51970.1 | 23.711 | 388 | 242 | 14 | 1 | 371 | 6 | 356 | 8.31e-19 | 87.4 |
| Msa1379250 | AT5G51970.2 | 23.711 | 388 | 242 | 14 | 1 | 371 | 6 | 356 | 8.31e-19 | 87.4 |
| Msa1379250 | AT1G72680.1 | 24.933 | 373 | 245 | 9 | 1 | 370 | 1 | 341 | 1.06e-14 | 75.1 |
| Msa1379250 | AT4G37990.1 | 25.000 | 312 | 209 | 9 | 37 | 346 | 35 | 323 | 2.40e-12 | 68.2 |
Find 125 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCATCTGTTGCTATCTT+TGG | 0.236969 | tig0020278:-39222 | Msa1379250:CDS |
| ACGGGTTTGTCATGATCTTT+TGG | 0.242014 | tig0020278:+38893 | None:intergenic |
| GTCATACTGATGTTTACTTC+TGG | 0.242164 | tig0020278:-40701 | Msa1379250:CDS |
| GCTTTGTTAATCTCTGAAAA+TGG | 0.242441 | tig0020278:+38251 | None:intergenic |
| GGGTTTGTAATTACCATAAA+AGG | 0.258930 | tig0020278:+38463 | None:intergenic |
| GTTTCTAGCCGATTTGAATT+AGG | 0.268437 | tig0020278:-39037 | Msa1379250:intron |
| TGGTCTCAGCTAAGAAGTTT+GGG | 0.291376 | tig0020278:-38934 | Msa1379250:intron |
| CTTTCATTCAACAAATTCAT+AGG | 0.292860 | tig0020278:+38500 | None:intergenic |
| TTGGTCTCAGCTAAGAAGTT+TGG | 0.297490 | tig0020278:-38935 | Msa1379250:intron |
| GCAACATGTGTGATCTTCTT+AGG | 0.311495 | tig0020278:-39875 | Msa1379250:CDS |
| TCAGTCAAGATTCACTATTA+AGG | 0.325630 | tig0020278:-39817 | Msa1379250:CDS |
| TGGGGTGTTGCTGTACTTGT+TGG | 0.336473 | tig0020278:-38557 | Msa1379250:CDS |
| ATGTACTTCTCTACAACATT+AGG | 0.344846 | tig0020278:+38428 | None:intergenic |
| TTGAATGCATCATCTTTGTT+TGG | 0.346611 | tig0020278:+38530 | None:intergenic |
| GCTGAAGGAGCAAGGATATC+TGG | 0.347450 | tig0020278:-39088 | Msa1379250:CDS |
| GTTGAATGAAAGGACTCTTA+AGG | 0.347627 | tig0020278:-38489 | Msa1379250:CDS |
| ATCTTTGGACTTGGAGCTGT+TGG | 0.351212 | tig0020278:-39207 | Msa1379250:CDS |
| ACTTTGTCAAGTGGTGCATC+AGG | 0.352356 | tig0020278:+39711 | None:intergenic |
| CTATGTTCTTGTTCTCAATC+TGG | 0.372638 | tig0020278:-38128 | Msa1379250:three_prime_UTR |
| TTGAATGAAAGGACTCTTAA+GGG | 0.375052 | tig0020278:-38488 | Msa1379250:CDS |
| GCAACAGATGAACCGGGTTT+CGG | 0.376365 | tig0020278:+39231 | None:intergenic |
| TATCTGCAGCTGCGGTTGCA+TGG | 0.381586 | tig0020278:-40815 | Msa1379250:intron |
| GCTGCGGTTGCATGGGAGGC+GGG | 0.386440 | tig0020278:-40807 | Msa1379250:CDS |
| CTGTTGAAGTAGTCCCTACT+AGG | 0.388926 | tig0020278:-38154 | Msa1379250:three_prime_UTR |
| TCATACTGATGTTTACTTCT+GGG | 0.391708 | tig0020278:-40700 | Msa1379250:CDS |
| GGCGGGGAAGCCGCTGGTGA+TGG | 0.393519 | tig0020278:-40790 | Msa1379250:CDS |
| TGTTGAACTAACCTGTTGTA+CGG | 0.403420 | tig0020278:+38874 | None:intergenic |
| GACTCTTTGTGAAGTTTGAT+TGG | 0.410028 | tig0020278:-38048 | Msa1379250:three_prime_UTR |
| AGCTGCGGTTGCATGGGAGG+CGG | 0.413137 | tig0020278:-40808 | Msa1379250:CDS |
| AAAGATAGCAACAGATGAAC+CGG | 0.416086 | tig0020278:+39224 | None:intergenic |
| TCTGTTGCTATCTTTGGACT+TGG | 0.419387 | tig0020278:-39216 | Msa1379250:CDS |
| ACAAATTCAATAATCAGAAA+TGG | 0.420697 | tig0020278:+38071 | None:intergenic |
| CAGTCAAGATTCACTATTAA+GGG | 0.421787 | tig0020278:-39816 | Msa1379250:CDS |
| CATTATATTCATCATATACT+AGG | 0.425714 | tig0020278:+38005 | None:intergenic |
| TCATGACAAACCCGTACAAC+AGG | 0.433809 | tig0020278:-38885 | Msa1379250:intron |
| GATCGTGCTGTTGAATGTAC+TGG | 0.436537 | tig0020278:-38715 | Msa1379250:CDS |
| ATCTGCAGCTGCGGTTGCAT+GGG | 0.438978 | tig0020278:-40814 | Msa1379250:intron |
| TTGTAGAGAAGTACATGAAA+GGG | 0.451043 | tig0020278:-38421 | Msa1379250:CDS |
| TCTGGTGCATCAAGAATCAT+TGG | 0.451804 | tig0020278:-39070 | Msa1379250:CDS |
| TTGTGTGTCCTTGTTGTTGT+GGG | 0.454730 | tig0020278:+42017 | None:intergenic |
| CAAGAACATAGTCCCCTAGT+AGG | 0.461232 | tig0020278:+38140 | None:intergenic |
| GTAATTGCTGAAATGACAAA+TGG | 0.467912 | tig0020278:-38745 | Msa1379250:CDS |
| TTTCGGCTTAGCAACATTGA+TGG | 0.472708 | tig0020278:+39248 | None:intergenic |
| CCACACTCCCCTGTGAATAC+AGG | 0.474104 | tig0020278:+39927 | None:intergenic |
| CCTGTATTCACAGGGGAGTG+TGG | 0.474817 | tig0020278:-39927 | Msa1379250:CDS |
| CATGCCCTGCCTGTATTCAC+AGG | 0.480140 | tig0020278:-39936 | Msa1379250:CDS |
| GCCGCTGGTGATGGAGGAAG+TGG | 0.480972 | tig0020278:-40781 | Msa1379250:CDS |
| ACAGGCAGGGCATGATCCCC+TGG | 0.483648 | tig0020278:+39945 | None:intergenic |
| CTGTATTCACAGGGGAGTGT+GGG | 0.483700 | tig0020278:-39926 | Msa1379250:CDS |
| TGCAGCTGCGGTTGCATGGG+AGG | 0.488595 | tig0020278:-40811 | Msa1379250:intron |
| ATGGGAGGCGGGGAAGCCGC+TGG | 0.490732 | tig0020278:-40796 | Msa1379250:CDS |
| CTATGAATTTGTTGAATGAA+AGG | 0.494743 | tig0020278:-38499 | Msa1379250:CDS |
| TTCTTAGGATCAACACGGAC+AGG | 0.502318 | tig0020278:-39860 | Msa1379250:CDS |
| CATTCGGATGATGCATCTGA+TGG | 0.504913 | tig0020278:+38202 | None:intergenic |
| ACATTCGAAAGCTGAGATCA+TGG | 0.510392 | tig0020278:+38681 | None:intergenic |
| GCTGTACTCGACATGACTTA+AGG | 0.513986 | tig0020278:+41917 | None:intergenic |
| TTTCATTCAACAAATTCATA+GGG | 0.514951 | tig0020278:+38501 | None:intergenic |
| TAAGTCATGTCGAGTACAGC+TGG | 0.515258 | tig0020278:-41914 | Msa1379250:exon |
| GTTGAACTAACCTGTTGTAC+GGG | 0.516621 | tig0020278:+38875 | None:intergenic |
| AACATTAGGAAGATCAGTGC+GGG | 0.517924 | tig0020278:+38442 | None:intergenic |
| TACAAATTTCAGGCTGCTGA+AGG | 0.521714 | tig0020278:-39103 | Msa1379250:intron |
| GCATTGTACCTAATTCAAAT+CGG | 0.523873 | tig0020278:+39029 | None:intergenic |
| CTGCGGTTGCATGGGAGGCG+GGG | 0.533283 | tig0020278:-40806 | Msa1379250:CDS |
| GGTGATGGAGGAAGTGGAGG+TGG | 0.533501 | tig0020278:-40775 | Msa1379250:CDS |
| GGGGAAGCCGCTGGTGATGG+AGG | 0.533706 | tig0020278:-40787 | Msa1379250:CDS |
| GTTGTAGAGAAGTACATGAA+AGG | 0.537144 | tig0020278:-38422 | Msa1379250:CDS |
| GAATATACTGTTGTTCATGC+TGG | 0.538058 | tig0020278:-39753 | Msa1379250:CDS |
| CTCAGCTGTGGAATATGCAC+AGG | 0.542001 | tig0020278:-39681 | Msa1379250:intron |
| TGTTTACTTCTGGGAAGCTA+AGG | 0.543162 | tig0020278:-40691 | Msa1379250:intron |
| AGACGGACTTCACCGGCTTG+TGG | 0.546092 | tig0020278:+40747 | None:intergenic |
| GTAAACATCAGTATGACAAA+GGG | 0.554993 | tig0020278:+40707 | None:intergenic |
| GTGCCGACGAAATGATGAAT+GGG | 0.557629 | tig0020278:+39789 | None:intergenic |
| AAAGTTTGTATTCTCAGCTG+TGG | 0.560671 | tig0020278:-39693 | Msa1379250:CDS |
| ATTGTGTGTCCTTGTTGTTG+TGG | 0.561715 | tig0020278:+42016 | None:intergenic |
| TATCTTGAGACGGACTTCAC+CGG | 0.564597 | tig0020278:+40740 | None:intergenic |
| AGTAAACATCAGTATGACAA+AGG | 0.570922 | tig0020278:+40706 | None:intergenic |
| TGTGCCGACGAAATGATGAA+TGG | 0.574064 | tig0020278:+39788 | None:intergenic |
| CGAAAGCTGAGATCATGGCC+TGG | 0.579058 | tig0020278:+38686 | None:intergenic |
| ACTCCCCTGTGAATACAGGC+AGG | 0.579461 | tig0020278:+39931 | None:intergenic |
| CATGATGTTGATCAGGATTG+TGG | 0.581178 | tig0020278:-40000 | Msa1379250:intron |
| TTCAGGCTGCTGAAGGAGCA+AGG | 0.586031 | tig0020278:-39096 | Msa1379250:intron |
| CATCAGATGCATCATCCGAA+TGG | 0.586918 | tig0020278:-38201 | Msa1379250:CDS |
| AAGAACATAGTCCCCTAGTA+GGG | 0.588537 | tig0020278:+38141 | None:intergenic |
| CAGCCCATTCATCATTTCGT+CGG | 0.590024 | tig0020278:-39792 | Msa1379250:CDS |
| TGTATTCACAGGGGAGTGTG+GGG | 0.591767 | tig0020278:-39925 | Msa1379250:CDS |
| CTTTGTCAAGTGGTGCATCA+GGG | 0.593942 | tig0020278:+39712 | None:intergenic |
| GATTGTGGAGAGCGTAGGCG+AGG | 0.594735 | tig0020278:-39985 | Msa1379250:CDS |
| TCTTAGGATCAACACGGACA+GGG | 0.595918 | tig0020278:-39859 | Msa1379250:CDS |
| AGAATACAAACTTTGTCAAG+TGG | 0.596408 | tig0020278:+39702 | None:intergenic |
| TGAATGTACTGGGAGCATCC+AGG | 0.596660 | tig0020278:-38704 | Msa1379250:CDS |
| GAGGTGGCGCCACCACAAGC+CGG | 0.599089 | tig0020278:-40759 | Msa1379250:CDS |
| TGTTGAAGTAGTCCCTACTA+GGG | 0.601642 | tig0020278:-38153 | Msa1379250:three_prime_UTR |
| AATGTTGCTAAGCCGAAACC+CGG | 0.606869 | tig0020278:-39243 | Msa1379250:CDS |
| ATCGTGCTGTTGAATGTACT+GGG | 0.609310 | tig0020278:-38714 | Msa1379250:CDS |
| GTGTGACACATCTAAAACCA+GGG | 0.609545 | tig0020278:-39962 | Msa1379250:CDS |
| ACTTGGAGCTGTTGGCCTTG+CGG | 0.616948 | tig0020278:-39199 | Msa1379250:intron |
| CGGACTTCACCGGCTTGTGG+TGG | 0.618100 | tig0020278:+40750 | None:intergenic |
| CTGTCCACATTGTAAGTCAG+AGG | 0.618115 | tig0020278:-39901 | Msa1379250:CDS |
| CAGATGCATCATCCGAATGG+AGG | 0.625117 | tig0020278:-38198 | Msa1379250:CDS |
| TGTAGAGAAGTACATGAAAG+GGG | 0.626357 | tig0020278:-38420 | Msa1379250:intron |
| AACATCAGTATGACAAAGGG+AGG | 0.627239 | tig0020278:+40710 | None:intergenic |
| GCTGGTGATGGAGGAAGTGG+AGG | 0.628022 | tig0020278:-40778 | Msa1379250:CDS |
| GGTGTGACACATCTAAAACC+AGG | 0.629311 | tig0020278:-39963 | Msa1379250:CDS |
| TGTTCTTGTTCTCAATCTGG+CGG | 0.630642 | tig0020278:-38125 | Msa1379250:three_prime_UTR |
| GGTCAAGTCATCAAATGCAA+AGG | 0.634446 | tig0020278:-41893 | Msa1379250:intron |
| CTCTCCTCTGACTTACAATG+TGG | 0.634714 | tig0020278:+39897 | None:intergenic |
| ATTGGAGAGAGTGTGACACT+TGG | 0.635834 | tig0020278:-38030 | Msa1379250:three_prime_UTR |
| ATGCCCTGCCTGTATTCACA+GGG | 0.640094 | tig0020278:-39935 | Msa1379250:CDS |
| GGTCTCAGCTAAGAAGTTTG+GGG | 0.642019 | tig0020278:-38933 | Msa1379250:intron |
| AGGTGAAGAGTATCTTGAGA+CGG | 0.642729 | tig0020278:+40730 | None:intergenic |
| ATCAGGATTGTGGAGAGCGT+AGG | 0.642832 | tig0020278:-39990 | Msa1379250:intron |
| AATAAACTCCCACAACAACA+AGG | 0.653418 | tig0020278:-42025 | Msa1379250:five_prime_UTR |
| CTTAGGATCAACACGGACAG+GGG | 0.662424 | tig0020278:-39858 | Msa1379250:CDS |
| ATTGTGGAGAGCGTAGGCGA+GGG | 0.662603 | tig0020278:-39984 | Msa1379250:CDS |
| AAGATAGCAACAGATGAACC+GGG | 0.667433 | tig0020278:+39225 | None:intergenic |
| ATTGCTGAAATGACAAATGG+AGG | 0.669847 | tig0020278:-38742 | Msa1379250:CDS |
| CTCCCCTGTGAATACAGGCA+GGG | 0.674123 | tig0020278:+39932 | None:intergenic |
| TCCACTTCCTCCATCACCAG+CGG | 0.690568 | tig0020278:+40780 | None:intergenic |
| CAACATTAGGAAGATCAGTG+CGG | 0.707517 | tig0020278:+38441 | None:intergenic |
| TGAAATGACAAATGGAGGTG+TGG | 0.709912 | tig0020278:-38737 | Msa1379250:CDS |
| ACATTAGGAAGATCAGTGCG+GGG | 0.718262 | tig0020278:+38443 | None:intergenic |
| GTTGAAGTAGTCCCTACTAG+GGG | 0.728264 | tig0020278:-38152 | Msa1379250:three_prime_UTR |
| TGTGACACATCTAAAACCAG+GGG | 0.732525 | tig0020278:-39961 | Msa1379250:CDS |
| TGCCCTGCCTGTATTCACAG+GGG | 0.737931 | tig0020278:-39934 | Msa1379250:CDS |
| TGATCTTCTTAGGATCAACA+CGG | 0.743683 | tig0020278:-39865 | Msa1379250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTTGATTGTTTTTAT+TGG | + | tig0020278:38389-38408 | None:intergenic | 10.0% |
| !! | ATAAAAACAATCAAAATTTA+CGG | - | tig0020278:38389-38408 | Msa1379250:intron | 10.0% |
| !!! | CATTTTATAACTTTAATTTT+TGG | + | tig0020278:38779-38798 | None:intergenic | 10.0% |
| !!! | TAAACATAGTAATTAATTTT+TGG | + | tig0020278:38810-38829 | None:intergenic | 10.0% |
| !!! | ATTTTTCTTAATTTACTATA+TGG | - | tig0020278:39828-39847 | Msa1379250:CDS | 10.0% |
| !! | TAAAAACAATCAAAATTTAC+GGG | - | tig0020278:38390-38409 | Msa1379250:intron | 15.0% |
| !!! | ACATTTTACAACTTAATTTT+TGG | + | tig0020278:38749-38768 | None:intergenic | 15.0% |
| !!! | TGAGTTTAATTTTAGATTAA+AGG | - | tig0020278:39389-39408 | Msa1379250:intron | 15.0% |
| !!! | TATTTAATTCTTGTTTTTTG+AGG | - | tig0020278:39609-39628 | Msa1379250:intron | 15.0% |
| !!! | ATTTAATTCTTGTTTTTTGA+GGG | - | tig0020278:39610-39629 | Msa1379250:intron | 15.0% |
| !!! | ATGAATTTTATTCATAATGT+TGG | - | tig0020278:39905-39924 | Msa1379250:CDS | 15.0% |
| !!! | AATAAGTTTAAAACAACTTA+TGG | + | tig0020278:40397-40416 | None:intergenic | 15.0% |
| !! | AAAATTAAGTCATATAACTT+AGG | + | tig0020278:40963-40982 | None:intergenic | 15.0% |
| !!! | CTTAATTTTTGAAATATTCT+TGG | - | tig0020278:40974-40993 | Msa1379250:intron | 15.0% |
| !! | ATAATCGTCTTTAAATCAAA+TGG | + | tig0020278:38165-38184 | None:intergenic | 20.0% |
| !!! | ATTAGTTGAATTGACTTTAA+TGG | - | tig0020278:38195-38214 | Msa1379250:CDS | 20.0% |
| !! | AAAAACAATCAAAATTTACG+GGG | - | tig0020278:38391-38410 | Msa1379250:intron | 20.0% |
| !! | AATACATGTAATTATTGCAT+TGG | - | tig0020278:38475-38494 | Msa1379250:CDS | 20.0% |
| !!! | TTTCTTTTTTTTTGAACAAG+TGG | - | tig0020278:38708-38727 | Msa1379250:CDS | 20.0% |
| !!! | TTTTTCACTACTATAAATGA+AGG | - | tig0020278:38844-38863 | Msa1379250:intron | 20.0% |
| !!! | AAATTGTGTTTTGCTTTTTA+TGG | - | tig0020278:39006-39025 | Msa1379250:intron | 20.0% |
| !! | TGATTTGATTGTATATGAAA+AGG | - | tig0020278:39329-39348 | Msa1379250:intron | 20.0% |
| !! | GATTTGATTGTATATGAAAA+GGG | - | tig0020278:39330-39349 | Msa1379250:intron | 20.0% |
| !! | ATTTGATTGTATATGAAAAG+GGG | - | tig0020278:39331-39350 | Msa1379250:intron | 20.0% |
| !!! | TTTAATTCTTGTTTTTTGAG+GGG | - | tig0020278:39611-39630 | Msa1379250:intron | 20.0% |
| !!! | CATAAGTTTAAAACAACTTA+TGG | + | tig0020278:40368-40387 | None:intergenic | 20.0% |
| !!! | CTTATTTTTATAATCTCTCT+AGG | - | tig0020278:40411-40430 | Msa1379250:CDS | 20.0% |
| !! | TATATTAATATCTCAATGCA+AGG | + | tig0020278:40596-40615 | None:intergenic | 20.0% |
| !! | TGAGATATTAATATATACCT+AGG | - | tig0020278:40601-40620 | Msa1379250:intron | 20.0% |
| !! | GATTCAATAATACAAATTTC+AGG | - | tig0020278:40815-40834 | Msa1379250:intron | 20.0% |
| !! | CTCAATCTTAAATCATTTAA+TGG | + | tig0020278:40935-40954 | None:intergenic | 20.0% |
| !!! | CATTAAATGATTTAAGATTG+AGG | - | tig0020278:40933-40952 | Msa1379250:intron | 20.0% |
| !! | TTTCATTCAACAAATTCATA+GGG | + | tig0020278:41430-41449 | None:intergenic | 20.0% |
| !! | ACAAATTCAATAATCAGAAA+TGG | + | tig0020278:41860-41879 | None:intergenic | 20.0% |
| !! | CATTATATTCATCATATACT+AGG | + | tig0020278:41926-41945 | None:intergenic | 20.0% |
| !! | ATCCTAAAATAAAAAGATAG+AGG | - | tig0020278:42001-42020 | Msa1379250:five_prime_UTR | 20.0% |
| !!! | ATCCTCTATCTTTTTATTTT+AGG | + | tig0020278:42006-42025 | None:intergenic | 20.0% |
| !! | TATTTGGAGTAGTATACAAT+TGG | - | tig0020278:38350-38369 | Msa1379250:intron | 25.0% |
| ! | ACAAGACCCAAAATTTATAA+AGG | - | tig0020278:38576-38595 | Msa1379250:intron | 25.0% |
| !! | CCTCTTCCTTTATAAATTTT+GGG | + | tig0020278:38585-38604 | None:intergenic | 25.0% |
| ! | CCAAAATTTATAAAGGAAGA+GGG | - | tig0020278:38583-38602 | Msa1379250:intron | 25.0% |
| !! | AGAATATTCTAGAAACGAAA+AGG | - | tig0020278:38610-38629 | Msa1379250:intron | 25.0% |
| ! | ACTATGTTTAGAAAATCACT+CGG | - | tig0020278:38820-38839 | Msa1379250:intron | 25.0% |
| ! | TTTGTAACAAAGAGAAAAAG+AGG | + | tig0020278:38976-38995 | None:intergenic | 25.0% |
| !!! | TTTTGCTTTTTATGGATCTA+AGG | - | tig0020278:39014-39033 | Msa1379250:intron | 25.0% |
| !!! | TTTGCTTTTTATGGATCTAA+GGG | - | tig0020278:39015-39034 | Msa1379250:intron | 25.0% |
| ! | TTTGATTGTATATGAAAAGG+GGG | - | tig0020278:39332-39351 | Msa1379250:intron | 25.0% |
| ! | TAGATTAAAGGAAATTAAGC+TGG | - | tig0020278:39401-39420 | Msa1379250:intron | 25.0% |
| !!! | ATTGGAGTCTTTTTTAATCT+GGG | - | tig0020278:39426-39445 | Msa1379250:intron | 25.0% |
| ! | TATGAATTGAATCCTTTACA+AGG | + | tig0020278:39639-39658 | None:intergenic | 25.0% |
| ! | CAATAAATCAATCATATCTG+TGG | + | tig0020278:39740-39759 | None:intergenic | 25.0% |
| ! | CGTAAGTACTTAAATGATAA+GGG | - | tig0020278:40514-40533 | Msa1379250:intron | 25.0% |
| ! | AGGATATATTATACACTACT+TGG | + | tig0020278:40576-40595 | None:intergenic | 25.0% |
| ! | CTTTCATTCAACAAATTCAT+AGG | + | tig0020278:41431-41450 | None:intergenic | 25.0% |
| !!! | CTATGAATTTGTTGAATGAA+AGG | - | tig0020278:41429-41448 | Msa1379250:intron | 25.0% |
| AGAAAACAATAAATGTTGCC+TGG | - | tig0020278:38271-38290 | Msa1379250:CDS | 30.0% | |
| ATGCAAAAGTGACACATATT+TGG | - | tig0020278:38334-38353 | Msa1379250:intron | 30.0% | |
| CCCAAAATTTATAAAGGAAG+AGG | - | tig0020278:38582-38601 | Msa1379250:intron | 30.0% | |
| ! | CCCTCTTCCTTTATAAATTT+TGG | + | tig0020278:38586-38605 | None:intergenic | 30.0% |
| AGAAAGAAACACAATCCAAA+TGG | + | tig0020278:39042-39061 | None:intergenic | 30.0% | |
| AGCTGCAGATATAAAATGAT+CGG | + | tig0020278:39104-39123 | None:intergenic | 30.0% | |
| GTAAACATCAGTATGACAAA+GGG | + | tig0020278:39224-39243 | None:intergenic | 30.0% | |
| AGTAAACATCAGTATGACAA+AGG | + | tig0020278:39225-39244 | None:intergenic | 30.0% | |
| TCATACTGATGTTTACTTCT+GGG | - | tig0020278:39228-39247 | Msa1379250:CDS | 30.0% | |
| !!! | GATTGGAGTCTTTTTTAATC+TGG | - | tig0020278:39425-39444 | Msa1379250:intron | 30.0% |
| TTATTCTTTCCTTCTGTTTC+AGG | - | tig0020278:39494-39513 | Msa1379250:intron | 30.0% | |
| TATTCTTTCCTTCTGTTTCA+GGG | - | tig0020278:39495-39514 | Msa1379250:intron | 30.0% | |
| TCAGTCAAGATTCACTATTA+AGG | - | tig0020278:40111-40130 | Msa1379250:intron | 30.0% | |
| CAGTCAAGATTCACTATTAA+GGG | - | tig0020278:40112-40131 | Msa1379250:intron | 30.0% | |
| AGAATACAAACTTTGTCAAG+TGG | + | tig0020278:40229-40248 | None:intergenic | 30.0% | |
| GCGTAAGTACTTAAATGATA+AGG | - | tig0020278:40513-40532 | Msa1379250:intron | 30.0% | |
| CCATGAATGCAAATTGAATT+AGG | + | tig0020278:40642-40661 | None:intergenic | 30.0% | |
| CCTAATTCAATTTGCATTCA+TGG | - | tig0020278:40639-40658 | Msa1379250:intron | 30.0% | |
| TATAAAAGTAACATACCGCA+AGG | + | tig0020278:40747-40766 | None:intergenic | 30.0% | |
| GCATTGTACCTAATTCAAAT+CGG | + | tig0020278:40902-40921 | None:intergenic | 30.0% | |
| GTAATTGCTGAAATGACAAA+TGG | - | tig0020278:41183-41202 | Msa1379250:intron | 30.0% | |
| !!! | ATTTTGTTTTGCATACATCG+TGG | + | tig0020278:41275-41294 | None:intergenic | 30.0% |
| AGAAGTTATAAAGCTTACTG+AGG | - | tig0020278:41319-41338 | Msa1379250:intron | 30.0% | |
| !!! | AGCCTTGATTTGTTTTTCTT+AGG | - | tig0020278:41346-41365 | Msa1379250:intron | 30.0% |
| !!! | GCCTTGATTTGTTTTTCTTA+GGG | - | tig0020278:41347-41366 | Msa1379250:intron | 30.0% |
| ACCCTAAGAAAAACAAATCA+AGG | + | tig0020278:41351-41370 | None:intergenic | 30.0% | |
| !!! | TGATTTGTTTTTCTTAGGGT+TGG | - | tig0020278:41351-41370 | Msa1379250:intron | 30.0% |
| !! | GATTTGTTTTTCTTAGGGTT+GGG | - | tig0020278:41352-41371 | Msa1379250:intron | 30.0% |
| !! | ATTTGTTTTTCTTAGGGTTG+GGG | - | tig0020278:41353-41372 | Msa1379250:intron | 30.0% |
| TTGAATGCATCATCTTTGTT+TGG | + | tig0020278:41401-41420 | None:intergenic | 30.0% | |
| TTGAATGAAAGGACTCTTAA+GGG | - | tig0020278:41440-41459 | Msa1379250:intron | 30.0% | |
| GGGTTTGTAATTACCATAAA+AGG | + | tig0020278:41468-41487 | None:intergenic | 30.0% | |
| ATGTACTTCTCTACAACATT+AGG | + | tig0020278:41503-41522 | None:intergenic | 30.0% | |
| ! | TTGTAGAGAAGTACATGAAA+GGG | - | tig0020278:41507-41526 | Msa1379250:intron | 30.0% |
| !! | TGTTGATAATTTGATACTGC+AGG | - | tig0020278:41619-41638 | Msa1379250:intron | 30.0% |
| ! | GCTTTGTTAATCTCTGAAAA+TGG | + | tig0020278:41680-41699 | None:intergenic | 30.0% |
| ! | AAATGCAAAGGTATGATCAC+TGG | - | tig0020278:38047-38066 | Msa1379250:three_prime_UTR | 35.0% |
| GGTATGATCACTGGATTTAT+TGG | - | tig0020278:38056-38075 | Msa1379250:three_prime_UTR | 35.0% | |
| !! | GCTGTCACTTTAAAATAACC+AGG | + | tig0020278:38292-38311 | None:intergenic | 35.0% |
| ! | TGATTATGAGTGAGTTGAGT+GGG | + | tig0020278:38890-38909 | None:intergenic | 35.0% |
| ! | ATGATTATGAGTGAGTTGAG+TGG | + | tig0020278:38891-38910 | None:intergenic | 35.0% |
| TTAACTATGTCGAACACTGT+TGG | - | tig0020278:38921-38940 | Msa1379250:CDS | 35.0% | |
| ACAAAGAGAAAAAGAGGACA+TGG | + | tig0020278:38970-38989 | None:intergenic | 35.0% | |
| ! | TCATTTTATATCTGCAGCTG+CGG | - | tig0020278:39105-39124 | Msa1379250:intron | 35.0% |
| GTCATACTGATGTTTACTTC+TGG | - | tig0020278:39227-39246 | Msa1379250:CDS | 35.0% | |
| AAGGAAATTAAGCTGGTGAT+TGG | - | tig0020278:39408-39427 | Msa1379250:intron | 35.0% | |
| CCAAAAATACGAGGAAACAA+TGG | + | tig0020278:39528-39547 | None:intergenic | 35.0% | |
| ! | CCATTGTTTCCTCGTATTTT+TGG | - | tig0020278:39525-39544 | Msa1379250:intron | 35.0% |
| TGATCTTCTTAGGATCAACA+CGG | - | tig0020278:40063-40082 | Msa1379250:intron | 35.0% | |
| GAATATACTGTTGTTCATGC+TGG | - | tig0020278:40175-40194 | Msa1379250:intron | 35.0% | |
| AAAGTTTGTATTCTCAGCTG+TGG | - | tig0020278:40235-40254 | Msa1379250:intron | 35.0% | |
| GGAAATCATATACTCAACCT+AGG | + | tig0020278:40621-40640 | None:intergenic | 35.0% | |
| CAATTTGCATTCATGGTTGT+AGG | - | tig0020278:40646-40665 | Msa1379250:intron | 35.0% | |
| AAAGATAGCAACAGATGAAC+CGG | + | tig0020278:40707-40726 | None:intergenic | 35.0% | |
| !! | GTTTCTAGCCGATTTGAATT+AGG | - | tig0020278:40891-40910 | Msa1379250:intron | 35.0% |
| TGTTGAACTAACCTGTTGTA+CGG | + | tig0020278:41057-41076 | None:intergenic | 35.0% | |
| ATTGCTGAAATGACAAATGG+AGG | - | tig0020278:41186-41205 | Msa1379250:intron | 35.0% | |
| GTTGAATGAAAGGACTCTTA+AGG | - | tig0020278:41439-41458 | Msa1379250:intron | 35.0% | |
| !!! | ACTCTTAAGGGTACCTTTTA+TGG | - | tig0020278:41452-41471 | Msa1379250:intron | 35.0% |
| ! | GTTGTAGAGAAGTACATGAA+AGG | - | tig0020278:41506-41525 | Msa1379250:intron | 35.0% |
| ! | TGTAGAGAAGTACATGAAAG+GGG | - | tig0020278:41508-41527 | Msa1379250:intron | 35.0% |
| !! | GCTTTTGATTACATGCTGAA+AGG | - | tig0020278:41698-41717 | Msa1379250:intron | 35.0% |
| ! | TAGAGTTTTACTCCTCCATT+CGG | + | tig0020278:41745-41764 | None:intergenic | 35.0% |
| CTATGTTCTTGTTCTCAATC+TGG | - | tig0020278:41800-41819 | Msa1379250:intron | 35.0% | |
| GACTCTTTGTGAAGTTTGAT+TGG | - | tig0020278:41880-41899 | Msa1379250:intron | 35.0% | |
| !! | TTGTGTGTCCTTGTTGTTGT+GGG | + | tig0020278:37914-37933 | None:intergenic | 40.0% |
| !! | ATTGTGTGTCCTTGTTGTTG+TGG | + | tig0020278:37915-37934 | None:intergenic | 40.0% |
| GGTCAAGTCATCAAATGCAA+AGG | - | tig0020278:38035-38054 | Msa1379250:three_prime_UTR | 40.0% | |
| ATGGCACACTTAATCTGAGA+CGG | + | tig0020278:38146-38165 | None:intergenic | 40.0% | |
| !! | AGTATGCTTAAAGAGTGTCC+CGG | - | tig0020278:38541-38560 | Msa1379250:CDS | 40.0% |
| TAGAAACGAAAAGGAGAACC+AGG | - | tig0020278:38619-38638 | Msa1379250:intron | 40.0% | |
| GAACCAGGTGGTATAATTTG+TGG | - | tig0020278:38634-38653 | Msa1379250:intron | 40.0% | |
| AAGCCACAAATTATACCACC+TGG | + | tig0020278:38640-38659 | None:intergenic | 40.0% | |
| ! | AGGTGGTATAATTTGTGGCT+TGG | - | tig0020278:38639-38658 | Msa1379250:intron | 40.0% |
| ! | TGGTATAATTTGTGGCTTGG+TGG | - | tig0020278:38642-38661 | Msa1379250:intron | 40.0% |
| GTGGTAAAGTCAAATCCCAA+AGG | - | tig0020278:38661-38680 | Msa1379250:intron | 40.0% | |
| ! | GATTATGAGTGAGTTGAGTG+GGG | + | tig0020278:38889-38908 | None:intergenic | 40.0% |
| TATGGATCTAAGGGTCCATT+TGG | - | tig0020278:39024-39043 | Msa1379250:intron | 40.0% | |
| !! | AGGTGAAGAGTATCTTGAGA+CGG | + | tig0020278:39201-39220 | None:intergenic | 40.0% |
| AACATCAGTATGACAAAGGG+AGG | + | tig0020278:39221-39240 | None:intergenic | 40.0% | |
| ! | TGTTTACTTCTGGGAAGCTA+AGG | - | tig0020278:39237-39256 | Msa1379250:CDS | 40.0% |
| GCTTCATGACCAAAAATACG+AGG | + | tig0020278:39537-39556 | None:intergenic | 40.0% | |
| !!! | CGTATTTTTGGTCATGAAGC+TGG | - | tig0020278:39537-39556 | Msa1379250:intron | 40.0% |
| !!! | ATTTTTGGTCATGAAGCTGG+AGG | - | tig0020278:39540-39559 | Msa1379250:intron | 40.0% |
| !! | TTTTTGGTCATGAAGCTGGA+GGG | - | tig0020278:39541-39560 | Msa1379250:intron | 40.0% |
| !! | TTTTGAGGGGTTCCTTGTAA+AGG | - | tig0020278:39624-39643 | Msa1379250:intron | 40.0% |
| ATGTTGGCATGATGTTGATC+AGG | - | tig0020278:39921-39940 | Msa1379250:CDS | 40.0% | |
| CATGATGTTGATCAGGATTG+TGG | - | tig0020278:39928-39947 | Msa1379250:CDS | 40.0% | |
| ! | GTGTGACACATCTAAAACCA+GGG | - | tig0020278:39966-39985 | Msa1379250:CDS | 40.0% |
| ! | TGTGACACATCTAAAACCAG+GGG | - | tig0020278:39967-39986 | Msa1379250:CDS | 40.0% |
| GCAACATGTGTGATCTTCTT+AGG | - | tig0020278:40053-40072 | Msa1379250:intron | 40.0% | |
| TTTCGGCTTAGCAACATTGA+TGG | + | tig0020278:40683-40702 | None:intergenic | 40.0% | |
| AAGATAGCAACAGATGAACC+GGG | + | tig0020278:40706-40725 | None:intergenic | 40.0% | |
| GGTTCATCTGTTGCTATCTT+TGG | - | tig0020278:40706-40725 | Msa1379250:CDS | 40.0% | |
| TCTGTTGCTATCTTTGGACT+TGG | - | tig0020278:40712-40731 | Msa1379250:CDS | 40.0% | |
| GTAACACAAACACACACTCA+TGG | + | tig0020278:40770-40789 | None:intergenic | 40.0% | |
| TACAAATTTCAGGCTGCTGA+AGG | - | tig0020278:40825-40844 | Msa1379250:intron | 40.0% | |
| TCTGGTGCATCAAGAATCAT+TGG | - | tig0020278:40858-40877 | Msa1379250:intron | 40.0% | |
| TTGGTCTCAGCTAAGAAGTT+TGG | - | tig0020278:40993-41012 | Msa1379250:intron | 40.0% | |
| TGGTCTCAGCTAAGAAGTTT+GGG | - | tig0020278:40994-41013 | Msa1379250:intron | 40.0% | |
| ! | CGGGTTTGTCATGATCTTTT+GGG | + | tig0020278:41037-41056 | None:intergenic | 40.0% |
| ! | ACGGGTTTGTCATGATCTTT+TGG | + | tig0020278:41038-41057 | None:intergenic | 40.0% |
| GTTGAACTAACCTGTTGTAC+GGG | + | tig0020278:41056-41075 | None:intergenic | 40.0% | |
| TGAAATGACAAATGGAGGTG+TGG | - | tig0020278:41191-41210 | Msa1379250:intron | 40.0% | |
| ! | ATCGTGCTGTTGAATGTACT+GGG | - | tig0020278:41214-41233 | Msa1379250:intron | 40.0% |
| ACATTCGAAAGCTGAGATCA+TGG | + | tig0020278:41250-41269 | None:intergenic | 40.0% | |
| AACATTAGGAAGATCAGTGC+GGG | + | tig0020278:41489-41508 | None:intergenic | 40.0% | |
| CAACATTAGGAAGATCAGTG+CGG | + | tig0020278:41490-41509 | None:intergenic | 40.0% | |
| TAATTTGATACTGCAGGAGC+TGG | - | tig0020278:41625-41644 | Msa1379250:intron | 40.0% | |
| TGTTGAAGTAGTCCCTACTA+GGG | - | tig0020278:41775-41794 | Msa1379250:intron | 40.0% | |
| AAGAACATAGTCCCCTAGTA+GGG | + | tig0020278:41790-41809 | None:intergenic | 40.0% | |
| TGTTCTTGTTCTCAATCTGG+CGG | - | tig0020278:41803-41822 | Msa1379250:intron | 40.0% | |
| GCTGTACTCGACATGACTTA+AGG | + | tig0020278:38014-38033 | None:intergenic | 45.0% | |
| TAAGTCATGTCGAGTACAGC+TGG | - | tig0020278:38014-38033 | Msa1379250:three_prime_UTR | 45.0% | |
| GAAATGTTAACGAGTGTCCC+CGG | - | tig0020278:38413-38432 | Msa1379250:intron | 45.0% | |
| AAATGTTAACGAGTGTCCCC+GGG | - | tig0020278:38414-38433 | Msa1379250:intron | 45.0% | |
| !! | ATGTTCCTTAAAGAGTGCCC+CGG | + | tig0020278:38435-38454 | None:intergenic | 45.0% |
| TCTTGTTAACGAGTGTCTCC+GGG | + | tig0020278:38562-38581 | None:intergenic | 45.0% | |
| ! | GTCTTGTTAACGAGTGTCTC+CGG | + | tig0020278:38563-38582 | None:intergenic | 45.0% |
| AAACGAAAAGGAGAACCAGG+TGG | - | tig0020278:38622-38641 | Msa1379250:intron | 45.0% | |
| ! | ATTTTACCAGCTGCGCCTTT+GGG | + | tig0020278:38679-38698 | None:intergenic | 45.0% |
| TGAAGGTCACTGACAGTAGT+TGG | - | tig0020278:38861-38880 | Msa1379250:intron | 45.0% | |
| TATGTCGAACACTGTTGGTC+AGG | - | tig0020278:38926-38945 | Msa1379250:CDS | 45.0% | |
| ! | TATCTTGAGACGGACTTCAC+CGG | + | tig0020278:39191-39210 | None:intergenic | 45.0% |
| GAGTTTGACCCTGAAACAGA+AGG | + | tig0020278:39506-39525 | None:intergenic | 45.0% | |
| ! | GGTGTGACACATCTAAAACC+AGG | - | tig0020278:39965-39984 | Msa1379250:CDS | 45.0% |
| CTGTCCACATTGTAAGTCAG+AGG | - | tig0020278:40027-40046 | Msa1379250:intron | 45.0% | |
| CTCTCCTCTGACTTACAATG+TGG | + | tig0020278:40034-40053 | None:intergenic | 45.0% | |
| TTCTTAGGATCAACACGGAC+AGG | - | tig0020278:40068-40087 | Msa1379250:intron | 45.0% | |
| TCTTAGGATCAACACGGACA+GGG | - | tig0020278:40069-40088 | Msa1379250:intron | 45.0% | |
| CAGCCCATTCATCATTTCGT+CGG | - | tig0020278:40136-40155 | Msa1379250:intron | 45.0% | |
| ! | GTGCCGACGAAATGATGAAT+GGG | + | tig0020278:40142-40161 | None:intergenic | 45.0% |
| ! | TGTGCCGACGAAATGATGAA+TGG | + | tig0020278:40143-40162 | None:intergenic | 45.0% |
| CTTTGTCAAGTGGTGCATCA+GGG | + | tig0020278:40219-40238 | None:intergenic | 45.0% | |
| ACTTTGTCAAGTGGTGCATC+AGG | + | tig0020278:40220-40239 | None:intergenic | 45.0% | |
| GAATATGCACAGGTATGAGC+TGG | - | tig0020278:40257-40276 | Msa1379250:intron | 45.0% | |
| GCATTCATGGTTGTAGGTCT+TGG | - | tig0020278:40652-40671 | Msa1379250:intron | 45.0% | |
| AATGTTGCTAAGCCGAAACC+CGG | - | tig0020278:40685-40704 | Msa1379250:intron | 45.0% | |
| ATCTTTGGACTTGGAGCTGT+TGG | - | tig0020278:40721-40740 | Msa1379250:CDS | 45.0% | |
| GGTCTCAGCTAAGAAGTTTG+GGG | - | tig0020278:40995-41014 | Msa1379250:intron | 45.0% | |
| TCATGACAAACCCGTACAAC+AGG | - | tig0020278:41043-41062 | Msa1379250:intron | 45.0% | |
| !!! | GCTGTGTCATTTTGTGTGCA+AGG | - | tig0020278:41161-41180 | Msa1379250:intron | 45.0% |
| ! | GATCGTGCTGTTGAATGTAC+TGG | - | tig0020278:41213-41232 | Msa1379250:intron | 45.0% |
| ACATTAGGAAGATCAGTGCG+GGG | + | tig0020278:41488-41507 | None:intergenic | 45.0% | |
| CATTCGGATGATGCATCTGA+TGG | + | tig0020278:41729-41748 | None:intergenic | 45.0% | |
| CATCAGATGCATCATCCGAA+TGG | - | tig0020278:41727-41746 | Msa1379250:intron | 45.0% | |
| CTGTTGAAGTAGTCCCTACT+AGG | - | tig0020278:41774-41793 | Msa1379250:intron | 45.0% | |
| GTTGAAGTAGTCCCTACTAG+GGG | - | tig0020278:41776-41795 | Msa1379250:intron | 45.0% | |
| CAAGAACATAGTCCCCTAGT+AGG | + | tig0020278:41791-41810 | None:intergenic | 45.0% | |
| ! | ATTGGAGAGAGTGTGACACT+TGG | - | tig0020278:41898-41917 | Msa1379250:CDS | 45.0% |
| AATGTTAACGAGTGTCCCCG+GGG | - | tig0020278:38415-38434 | Msa1379250:intron | 50.0% | |
| !! | TGTTCCTTAAAGAGTGCCCC+GGG | + | tig0020278:38434-38453 | None:intergenic | 50.0% |
| ! | CATTTTACCAGCTGCGCCTT+TGG | + | tig0020278:38680-38699 | None:intergenic | 50.0% |
| ! | CAAAGGCGCAGCTGGTAAAA+TGG | - | tig0020278:38678-38697 | Msa1379250:CDS | 50.0% |
| ! | ATCAGGATTGTGGAGAGCGT+AGG | - | tig0020278:39938-39957 | Msa1379250:CDS | 50.0% |
| ATGCCCTGCCTGTATTCACA+GGG | - | tig0020278:39993-40012 | Msa1379250:intron | 50.0% | |
| ! | CTGTATTCACAGGGGAGTGT+GGG | - | tig0020278:40002-40021 | Msa1379250:intron | 50.0% |
| ! | TGTATTCACAGGGGAGTGTG+GGG | - | tig0020278:40003-40022 | Msa1379250:intron | 50.0% |
| CTTAGGATCAACACGGACAG+GGG | - | tig0020278:40070-40089 | Msa1379250:intron | 50.0% | |
| CTCAGCTGTGGAATATGCAC+AGG | - | tig0020278:40247-40266 | Msa1379250:intron | 50.0% | |
| TGCACAGGTATGAGCTGGTT+TGG | - | tig0020278:40262-40281 | Msa1379250:intron | 50.0% | |
| ! | GCACAGGTATGAGCTGGTTT+GGG | - | tig0020278:40263-40282 | Msa1379250:intron | 50.0% |
| GCAACAGATGAACCGGGTTT+CGG | + | tig0020278:40700-40719 | None:intergenic | 50.0% | |
| GCTGAAGGAGCAAGGATATC+TGG | - | tig0020278:40840-40859 | Msa1379250:intron | 50.0% | |
| !! | TGAATGTACTGGGAGCATCC+AGG | - | tig0020278:41224-41243 | Msa1379250:intron | 50.0% |
| !! | TGGGGTGTTGCTGTACTTGT+TGG | - | tig0020278:41371-41390 | Msa1379250:intron | 50.0% |
| CAGATGCATCATCCGAATGG+AGG | - | tig0020278:41730-41749 | Msa1379250:intron | 50.0% | |
| !! | GTTCCTTAAAGAGTGCCCCG+GGG | + | tig0020278:38433-38452 | None:intergenic | 55.0% |
| ! | TCAAATCCCAAAGGCGCAGC+TGG | - | tig0020278:38670-38689 | Msa1379250:intron | 55.0% |
| GGTCAGGTCATCAAGTGCAG+AGG | - | tig0020278:38942-38961 | Msa1379250:intron | 55.0% | |
| TATCTGCAGCTGCGGTTGCA+TGG | - | tig0020278:39113-39132 | Msa1379250:intron | 55.0% | |
| ATCTGCAGCTGCGGTTGCAT+GGG | - | tig0020278:39114-39133 | Msa1379250:intron | 55.0% | |
| TCCACTTCCTCCATCACCAG+CGG | + | tig0020278:39151-39170 | None:intergenic | 55.0% | |
| ! | ATTGTGGAGAGCGTAGGCGA+GGG | - | tig0020278:39944-39963 | Msa1379250:CDS | 55.0% |
| CATGCCCTGCCTGTATTCAC+AGG | - | tig0020278:39992-40011 | Msa1379250:intron | 55.0% | |
| TGCCCTGCCTGTATTCACAG+GGG | - | tig0020278:39994-40013 | Msa1379250:intron | 55.0% | |
| CTCCCCTGTGAATACAGGCA+GGG | + | tig0020278:39999-40018 | None:intergenic | 55.0% | |
| ACTCCCCTGTGAATACAGGC+AGG | + | tig0020278:40000-40019 | None:intergenic | 55.0% | |
| CCACACTCCCCTGTGAATAC+AGG | + | tig0020278:40004-40023 | None:intergenic | 55.0% | |
| CCTGTATTCACAGGGGAGTG+TGG | - | tig0020278:40001-40020 | Msa1379250:intron | 55.0% | |
| !! | ACTTGGAGCTGTTGGCCTTG+CGG | - | tig0020278:40729-40748 | Msa1379250:CDS | 55.0% |
| TTCAGGCTGCTGAAGGAGCA+AGG | - | tig0020278:40832-40851 | Msa1379250:intron | 55.0% | |
| CGAAAGCTGAGATCATGGCC+TGG | + | tig0020278:41245-41264 | None:intergenic | 55.0% | |
| ! | TGTCCCCGGGGCACTCTTTA+AGG | - | tig0020278:38427-38446 | Msa1379250:CDS | 60.0% |
| !! | GCTGGTGATGGAGGAAGTGG+AGG | - | tig0020278:39150-39169 | Msa1379250:intron | 60.0% |
| !! | GGTGATGGAGGAAGTGGAGG+TGG | - | tig0020278:39153-39172 | Msa1379250:intron | 60.0% |
| !! | AGACGGACTTCACCGGCTTG+TGG | + | tig0020278:39184-39203 | None:intergenic | 60.0% |
| ! | GATTGTGGAGAGCGTAGGCG+AGG | - | tig0020278:39943-39962 | Msa1379250:CDS | 60.0% |
| TGCAGCTGCGGTTGCATGGG+AGG | - | tig0020278:39117-39136 | Msa1379250:intron | 65.0% | |
| AGCTGCGGTTGCATGGGAGG+CGG | - | tig0020278:39120-39139 | Msa1379250:intron | 65.0% | |
| !! | GCCGCTGGTGATGGAGGAAG+TGG | - | tig0020278:39147-39166 | Msa1379250:intron | 65.0% |
| !! | CGGACTTCACCGGCTTGTGG+TGG | + | tig0020278:39181-39200 | None:intergenic | 65.0% |
| ACAGGCAGGGCATGATCCCC+TGG | + | tig0020278:39986-40005 | None:intergenic | 65.0% | |
| GCTGCGGTTGCATGGGAGGC+GGG | - | tig0020278:39121-39140 | Msa1379250:intron | 70.0% | |
| CTGCGGTTGCATGGGAGGCG+GGG | - | tig0020278:39122-39141 | Msa1379250:intron | 70.0% | |
| !! | GGGGAAGCCGCTGGTGATGG+AGG | - | tig0020278:39141-39160 | Msa1379250:intron | 70.0% |
| GAGGTGGCGCCACCACAAGC+CGG | - | tig0020278:39169-39188 | Msa1379250:intron | 70.0% | |
| ATGGGAGGCGGGGAAGCCGC+TGG | - | tig0020278:39132-39151 | Msa1379250:intron | 75.0% | |
| GGCGGGGAAGCCGCTGGTGA+TGG | - | tig0020278:39138-39157 | Msa1379250:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020278 | gene | 37906 | 42044 | 37906 | ID=Msa1379250;Name=Msa1379250 |
| tig0020278 | mRNA | 37906 | 42044 | 37906 | ID=Msa1379250-mRNA-1;Parent=Msa1379250;Name=Msa1379250-mRNA-1;_AED=0.13;_eAED=0.13;_QI=114|1|1|1|1|1|10|287|380 |
| tig0020278 | exon | 37906 | 38309 | 37906 | ID=Msa1379250-mRNA-1:exon:6540;Parent=Msa1379250-mRNA-1 |
| tig0020278 | exon | 38421 | 38582 | 38421 | ID=Msa1379250-mRNA-1:exon:6539;Parent=Msa1379250-mRNA-1 |
| tig0020278 | exon | 38672 | 38767 | 38672 | ID=Msa1379250-mRNA-1:exon:6538;Parent=Msa1379250-mRNA-1 |
| tig0020278 | exon | 38886 | 38947 | 38886 | ID=Msa1379250-mRNA-1:exon:6537;Parent=Msa1379250-mRNA-1 |
| tig0020278 | exon | 39038 | 39113 | 39038 | ID=Msa1379250-mRNA-1:exon:6536;Parent=Msa1379250-mRNA-1 |
| tig0020278 | exon | 39200 | 39282 | 39200 | ID=Msa1379250-mRNA-1:exon:6535;Parent=Msa1379250-mRNA-1 |
| tig0020278 | exon | 39682 | 40007 | 39682 | ID=Msa1379250-mRNA-1:exon:6534;Parent=Msa1379250-mRNA-1 |
| tig0020278 | exon | 40388 | 40434 | 40388 | ID=Msa1379250-mRNA-1:exon:6533;Parent=Msa1379250-mRNA-1 |
| tig0020278 | exon | 40692 | 40828 | 40692 | ID=Msa1379250-mRNA-1:exon:6532;Parent=Msa1379250-mRNA-1 |
| tig0020278 | exon | 41894 | 42044 | 41894 | ID=Msa1379250-mRNA-1:exon:6531;Parent=Msa1379250-mRNA-1 |
| tig0020278 | five_prime_UTR | 41931 | 42044 | 41931 | ID=Msa1379250-mRNA-1:five_prime_utr;Parent=Msa1379250-mRNA-1 |
| tig0020278 | CDS | 41894 | 41930 | 41894 | ID=Msa1379250-mRNA-1:cds;Parent=Msa1379250-mRNA-1 |
| tig0020278 | CDS | 40692 | 40828 | 40692 | ID=Msa1379250-mRNA-1:cds;Parent=Msa1379250-mRNA-1 |
| tig0020278 | CDS | 40388 | 40434 | 40388 | ID=Msa1379250-mRNA-1:cds;Parent=Msa1379250-mRNA-1 |
| tig0020278 | CDS | 39682 | 40007 | 39682 | ID=Msa1379250-mRNA-1:cds;Parent=Msa1379250-mRNA-1 |
| tig0020278 | CDS | 39200 | 39282 | 39200 | ID=Msa1379250-mRNA-1:cds;Parent=Msa1379250-mRNA-1 |
| tig0020278 | CDS | 39038 | 39113 | 39038 | ID=Msa1379250-mRNA-1:cds;Parent=Msa1379250-mRNA-1 |
| tig0020278 | CDS | 38886 | 38947 | 38886 | ID=Msa1379250-mRNA-1:cds;Parent=Msa1379250-mRNA-1 |
| tig0020278 | CDS | 38672 | 38767 | 38672 | ID=Msa1379250-mRNA-1:cds;Parent=Msa1379250-mRNA-1 |
| tig0020278 | CDS | 38421 | 38582 | 38421 | ID=Msa1379250-mRNA-1:cds;Parent=Msa1379250-mRNA-1 |
| tig0020278 | CDS | 38193 | 38309 | 38193 | ID=Msa1379250-mRNA-1:cds;Parent=Msa1379250-mRNA-1 |
| tig0020278 | three_prime_UTR | 37906 | 38192 | 37906 | ID=Msa1379250-mRNA-1:three_prime_utr;Parent=Msa1379250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
