Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219290 | XP_024633260.1 | 100.000 | 108 | 0 | 0 | 1 | 108 | 1 | 108 | 1.79e-69 | 213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219290 | A0A396JEH2 | 100.000 | 108 | 0 | 0 | 1 | 108 | 1 | 108 | 8.53e-70 | 213 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0098140 | Msa0219290 | 0.800136 | 1.660020e-48 | -8.615850e-47 |
| Msa0219290 | Msa0238070 | 0.842334 | 2.755484e-58 | -8.615850e-47 |
| Msa0219290 | Msa0258920 | 0.990550 | 3.605987e-183 | -8.615850e-47 |
| Msa0219290 | Msa0298390 | 0.964180 | 5.285799e-123 | -8.615850e-47 |
| Msa0219290 | Msa0380040 | -0.806631 | 7.488055e-50 | -8.615850e-47 |
| Msa0219290 | Msa0673010 | 0.822061 | 2.897347e-53 | -8.615850e-47 |
| Msa0219290 | Msa0692080 | -0.802076 | 6.658769e-49 | -8.615850e-47 |
| Msa0219290 | Msa0824680 | -0.810113 | 1.354305e-50 | -8.615850e-47 |
| Msa0219290 | Msa0950320 | -0.800975 | 1.119628e-48 | -8.615850e-47 |
| Msa0219290 | Msa0976310 | -0.800706 | 1.271041e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219290 | MtrunA17_Chr2g0321751 | 100.000 | 108 | 0 | 0 | 1 | 108 | 1 | 108 | 1.64e-73 | 213 |
| Msa0219290 | MtrunA17_Chr4g0025951 | 68.354 | 79 | 25 | 0 | 13 | 91 | 14 | 92 | 1.33e-33 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0219290 | AT5G22280.1 | 56.881 | 109 | 45 | 2 | 1 | 108 | 1 | 108 | 1.96e-36 | 120 |
| Msa0219290 | AT5G22280.2 | 50.526 | 95 | 45 | 2 | 15 | 108 | 7 | 100 | 9.39e-25 | 90.1 |
| Msa0219290 | AT3G44280.1 | 59.259 | 108 | 42 | 2 | 1 | 107 | 1 | 107 | 1.30e-22 | 85.1 |
| Msa0219290 | AT5G22280.3 | 50.704 | 71 | 34 | 1 | 1 | 71 | 1 | 70 | 6.57e-17 | 71.2 |
| Msa0219290 | AT5G06265.1 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0219290 | AT5G06265.6 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0219290 | AT5G06265.5 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0219290 | AT5G06265.8 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0219290 | AT5G06265.2 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0219290 | AT5G06265.9 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0219290 | AT5G06265.3 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0219290 | AT5G06265.10 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0219290 | AT5G06265.7 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0219290 | AT5G06265.4 | 43.182 | 88 | 44 | 2 | 1 | 83 | 62 | 148 | 1.80e-15 | 68.2 |
Find 50 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAGTTTGTGAAGAAAA+TGG | 0.176262 | 2_1:+66817441 | Msa0219290:three_prime_UTR |
| TATCGATCTGTGAGGAGTTT+AGG | 0.214733 | 2_1:-66813552 | None:intergenic |
| TTGATACTGTAATTATTATT+AGG | 0.241356 | 2_1:+66813806 | Msa0219290:five_prime_UTR |
| ATCGATCTGTGAGGAGTTTA+GGG | 0.278250 | 2_1:-66813551 | None:intergenic |
| TAACTCTATTCTTAACAAAA+TGG | 0.283953 | 2_1:-66817408 | None:intergenic |
| TTCCTCAGAGTGTGAGGTTA+GGG | 0.297890 | 2_1:-66813517 | None:intergenic |
| TGAACTTGTGCGGCATCTTC+AGG | 0.299337 | 2_1:+66817065 | Msa0219290:CDS |
| TCAAGAATCCGCTCAGTTAG+AGG | 0.329822 | 2_1:-66817141 | None:intergenic |
| TTTCCTCAGAGTGTGAGGTT+AGG | 0.356265 | 2_1:-66813518 | None:intergenic |
| ATGAAGTTTGTGATATGTTA+TGG | 0.388157 | 2_1:-66813339 | None:intergenic |
| AAGAAGTTTGTGAAGAAAAT+GGG | 0.405182 | 2_1:+66817442 | Msa0219290:three_prime_UTR |
| CGCGGTGGTTGAGGTCGGTT+GGG | 0.441896 | 2_1:-66813429 | None:intergenic |
| CGACAAATATCAAAATATGC+TGG | 0.465046 | 2_1:+66817384 | Msa0219290:three_prime_UTR |
| TGTTTCTTAATTCCTTCAAA+AGG | 0.474668 | 2_1:+66817245 | Msa0219290:three_prime_UTR |
| AATGATAAACGCGGTGGTTG+AGG | 0.477744 | 2_1:-66813438 | None:intergenic |
| CCTCAGAGTGTGAGGTTAGG+GGG | 0.482994 | 2_1:-66813515 | None:intergenic |
| CTTACGGAAGAGTGTTATTG+AGG | 0.484074 | 2_1:-66813590 | None:intergenic |
| CCCTCTTTCCTCAGAGTGTG+AGG | 0.492429 | 2_1:-66813523 | None:intergenic |
| AAAACGCGTTACTCTGCTGC+AGG | 0.500325 | 2_1:+66813370 | Msa0219290:five_prime_UTR |
| ACGCGGTGGTTGAGGTCGGT+TGG | 0.500554 | 2_1:-66813430 | None:intergenic |
| GTGAAGAAAATGGGTTGGAA+AGG | 0.511830 | 2_1:+66817451 | Msa0219290:three_prime_UTR |
| ATACTGTAATTATTATTAGG+AGG | 0.527928 | 2_1:+66813809 | Msa0219290:five_prime_UTR |
| GACAAATATCAAAATATGCT+GGG | 0.527963 | 2_1:+66817385 | Msa0219290:three_prime_UTR |
| GAGGAGGAAAGATATAGAAA+CGG | 0.533501 | 2_1:-66813474 | None:intergenic |
| GCTTCATTAACATGCTGCAA+AGG | 0.540262 | 2_1:-66817196 | None:intergenic |
| GGTGAGAAAGTAAGTTTGGG+AGG | 0.541097 | 2_1:-66813493 | None:intergenic |
| TGAAGAAACTGTTAAAGAGA+AGG | 0.542240 | 2_1:+66813973 | Msa0219290:CDS |
| CTCAGAGTGTGAGGTTAGGG+GGG | 0.545358 | 2_1:-66813514 | None:intergenic |
| AACAAGAAAACAAGCAACAT+AGG | 0.548448 | 2_1:-66813845 | None:intergenic |
| CCTCACACTCTGAGGAAAGA+GGG | 0.549170 | 2_1:+66813523 | Msa0219290:five_prime_UTR |
| TCCTCAGAGTGTGAGGTTAG+GGG | 0.550882 | 2_1:-66813516 | None:intergenic |
| AGTTTGTGAAGAAAATGGGT+TGG | 0.557736 | 2_1:+66817446 | Msa0219290:three_prime_UTR |
| ACCTCACACTCTGAGGAAAG+AGG | 0.558960 | 2_1:+66813522 | Msa0219290:five_prime_UTR |
| CAGCAGTGCAAAGGAAGCAA+TGG | 0.562786 | 2_1:+66817096 | Msa0219290:CDS |
| GGAACTATAAATAGCACTGT+AGG | 0.564242 | 2_1:+66817117 | Msa0219290:CDS |
| TAATCACTTCGCAATTCGAG+TGG | 0.583936 | 2_1:+66813879 | Msa0219290:CDS |
| GAGAAAGTAAGTTTGGGAGG+AGG | 0.585973 | 2_1:-66813490 | None:intergenic |
| GAACAACTGCAGCAGTGCAA+AGG | 0.593769 | 2_1:+66817087 | Msa0219290:CDS |
| ATAAACGCGGTGGTTGAGGT+CGG | 0.596120 | 2_1:-66813434 | None:intergenic |
| TATTAGGAGGAATCATGTCA+AGG | 0.619548 | 2_1:+66813822 | Msa0219290:exon |
| GACTCAACATCAGACACAAG+TGG | 0.644435 | 2_1:-66813908 | None:intergenic |
| CTCACACTCTGAGGAAAGAG+GGG | 0.645340 | 2_1:+66813524 | Msa0219290:five_prime_UTR |
| GAAGACTTAATGAACTTGTG+CGG | 0.669388 | 2_1:+66817055 | Msa0219290:CDS |
| TTGGGAAGTGAAAGCGACGA+CGG | 0.677407 | 2_1:-66813411 | None:intergenic |
| TATAGAAACGGAGAGTGACG+TGG | 0.699564 | 2_1:-66813462 | None:intergenic |
| TCACACTCTGAGGAAAGAGG+GGG | 0.700157 | 2_1:+66813525 | Msa0219290:five_prime_UTR |
| CTGTAGGTCCTCTAACTGAG+CGG | 0.706930 | 2_1:+66817133 | Msa0219290:CDS |
| AAATTCATTATCGATCTGTG+AGG | 0.738628 | 2_1:-66813560 | None:intergenic |
| TGACGTGGCAATGATAAACG+CGG | 0.768474 | 2_1:-66813447 | None:intergenic |
| CGTGGCAATGATAAACGCGG+TGG | 0.769199 | 2_1:-66813444 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAATTTAGATTTGTTTT+GGG | - | chr2_1:66814537-66814556 | None:intergenic | 10.0% |
| !!! | TTTAAAATTTAGATTTGTTT+TGG | - | chr2_1:66814538-66814557 | None:intergenic | 10.0% |
| !! | ATATATTATTAATATGAGAA+GGG | - | chr2_1:66816749-66816768 | None:intergenic | 10.0% |
| !! | AATATATTATTAATATGAGA+AGG | - | chr2_1:66816750-66816769 | None:intergenic | 10.0% |
| !! | TTGATACTGTAATTATTATT+AGG | + | chr2_1:66813806-66813825 | Msa0219290:five_prime_UTR | 15.0% |
| !!! | TTTTCTTATCTTTTTATGTT+TGG | + | chr2_1:66814006-66814025 | Msa0219290:intron | 15.0% |
| !!! | CATTTTTAATCATTTTGTTA+AGG | - | chr2_1:66815814-66815833 | None:intergenic | 15.0% |
| !! | CTTAACAAAATGATTAAAAA+TGG | + | chr2_1:66815812-66815831 | Msa0219290:intron | 15.0% |
| !! | AACTGATAAATTACTTTATA+TGG | + | chr2_1:66815883-66815902 | Msa0219290:intron | 15.0% |
| !! | TAAAGTGGAAATTGAAATTA+GGG | - | chr2_1:66813675-66813694 | None:intergenic | 20.0% |
| !! | TTAAAGTGGAAATTGAAATT+AGG | - | chr2_1:66813676-66813695 | None:intergenic | 20.0% |
| !! | AAATGGTAAAGAAATTAAAG+TGG | - | chr2_1:66813690-66813709 | None:intergenic | 20.0% |
| !! | ATACTGTAATTATTATTAGG+AGG | + | chr2_1:66813809-66813828 | Msa0219290:five_prime_UTR | 20.0% |
| !! | AATGATAAATTTCTCTGTTT+AGG | + | chr2_1:66814039-66814058 | Msa0219290:intron | 20.0% |
| !!! | TATTTTTGTATTAGCTATCT+AGG | + | chr2_1:66814302-66814321 | Msa0219290:intron | 20.0% |
| !!! | TTTCATCTGAATATTTTTTC+CGG | + | chr2_1:66814635-66814654 | Msa0219290:intron | 20.0% |
| !!! | TCCAAAAAGAAAGTTTATTT+TGG | + | chr2_1:66814993-66815012 | Msa0219290:intron | 20.0% |
| !! | ACGTGTTAAGAAATTAAAAA+AGG | - | chr2_1:66815090-66815109 | None:intergenic | 20.0% |
| !!! | GGACACTAATTTTTTTTTTA+AGG | - | chr2_1:66815139-66815158 | None:intergenic | 20.0% |
| !!! | CAATAACCATTTTATTCTTA+TGG | + | chr2_1:66815666-66815685 | Msa0219290:intron | 20.0% |
| !!! | TTTTCTTAAAGTAATCAGAA+AGG | - | chr2_1:66815731-66815750 | None:intergenic | 20.0% |
| !!! | AGTAATTTATCAGTTCTAAA+TGG | - | chr2_1:66815878-66815897 | None:intergenic | 20.0% |
| !! | AATTACTTTATATGGTAACT+TGG | + | chr2_1:66815891-66815910 | Msa0219290:intron | 20.0% |
| !!! | ATATAACATTCTATTTTGCT+TGG | + | chr2_1:66816808-66816827 | Msa0219290:intron | 20.0% |
| !!! | TTGTATTATCAGAAACATTT+TGG | + | chr2_1:66816866-66816885 | Msa0219290:intron | 20.0% |
| !! | TAACAAATAAATATCTGTTG+TGG | + | chr2_1:66816950-66816969 | Msa0219290:intron | 20.0% |
| !! | TCAGTAAAATTAAAATAGCA+TGG | - | chr2_1:66816976-66816995 | None:intergenic | 20.0% |
| !! | TAACTCTATTCTTAACAAAA+TGG | - | chr2_1:66817411-66817430 | None:intergenic | 20.0% |
| ! | ATGAAGTTTGTGATATGTTA+TGG | - | chr2_1:66813342-66813361 | None:intergenic | 25.0% |
| !!! | TTGAAGATGATGGATAATTA+AGG | - | chr2_1:66813644-66813663 | None:intergenic | 25.0% |
| ! | AGTCAAATGAAGTCAAAAAA+TGG | - | chr2_1:66813707-66813726 | None:intergenic | 25.0% |
| !!! | TGGTTATTTGATTTTGAATG+TGG | + | chr2_1:66813775-66813794 | Msa0219290:intron | 25.0% |
| !! | GACTGTTTAGTTGATATAAT+TGG | + | chr2_1:66814061-66814080 | Msa0219290:intron | 25.0% |
| !! | GTTTAGTTGATATAATTGGT+AGG | + | chr2_1:66814065-66814084 | Msa0219290:intron | 25.0% |
| !!! | GTTTTTTGATGAGAAGTTTT+TGG | + | chr2_1:66814118-66814137 | Msa0219290:intron | 25.0% |
| ! | AGAGAAAATCTAAGCTATTA+GGG | - | chr2_1:66814157-66814176 | None:intergenic | 25.0% |
| ! | AAGAGAAAATCTAAGCTATT+AGG | - | chr2_1:66814158-66814177 | None:intergenic | 25.0% |
| ! | TCAAATAAGCCAATCTAAAT+AGG | + | chr2_1:66814428-66814447 | Msa0219290:intron | 25.0% |
| ! | CTTGACAAAATTATTTGCAT+AGG | + | chr2_1:66814668-66814687 | Msa0219290:intron | 25.0% |
| ! | TTTGTTAGTACAAGGAATAT+GGG | - | chr2_1:66814756-66814775 | None:intergenic | 25.0% |
| !! | TTTTGTTAGTACAAGGAATA+TGG | - | chr2_1:66814757-66814776 | None:intergenic | 25.0% |
| !! | AAGACATTTTTGTTAGTACA+AGG | - | chr2_1:66814764-66814783 | None:intergenic | 25.0% |
| !! | TAAGGTTTGAAGTTAACTAT+AGG | - | chr2_1:66814802-66814821 | None:intergenic | 25.0% |
| ! | GTCATTTCTATACTATTCTA+AGG | - | chr2_1:66814820-66814839 | None:intergenic | 25.0% |
| ! | CAAAATACGTTTATCATTCA+AGG | - | chr2_1:66814847-66814866 | None:intergenic | 25.0% |
| ! | ATAACGAAGATTTGTATTCT+TGG | + | chr2_1:66814880-66814899 | Msa0219290:intron | 25.0% |
| ! | TAACGAAGATTTGTATTCTT+GGG | + | chr2_1:66814881-66814900 | Msa0219290:intron | 25.0% |
| !!! | ACAATGATGGATTTAAAGTA+AGG | + | chr2_1:66814923-66814942 | Msa0219290:intron | 25.0% |
| !!! | CAATGATGGATTTAAAGTAA+GGG | + | chr2_1:66814924-66814943 | Msa0219290:intron | 25.0% |
| !! | GCCAAAATAAACTTTCTTTT+TGG | - | chr2_1:66814997-66815016 | None:intergenic | 25.0% |
| !!! | TTTAGAGTCTTGTAACTTTT+AGG | - | chr2_1:66815179-66815198 | None:intergenic | 25.0% |
| ! | TTCAAAATATCACATAATGC+AGG | - | chr2_1:66815228-66815247 | None:intergenic | 25.0% |
| !!! | TGATATTTTGAACAGATCAT+TGG | + | chr2_1:66815236-66815255 | Msa0219290:intron | 25.0% |
| ! | CTTGTTCCATAAGAATAAAA+TGG | - | chr2_1:66815675-66815694 | None:intergenic | 25.0% |
| !!! | TTACCTTTTTTTAGCCTTTT+TGG | + | chr2_1:66815932-66815951 | Msa0219290:intron | 25.0% |
| ! | ATACCAAAAAGGCTAAAAAA+AGG | - | chr2_1:66815938-66815957 | None:intergenic | 25.0% |
| !! | TATTCATTGGCATTTTATTG+AGG | + | chr2_1:66815955-66815974 | Msa0219290:intron | 25.0% |
| !!! | ATTATCTCTGTTTTTATGCT+TGG | - | chr2_1:66816384-66816403 | None:intergenic | 25.0% |
| ! | CATAAAAACAGAGATAATAG+AGG | + | chr2_1:66816386-66816405 | Msa0219290:intron | 25.0% |
| !! | TTTTTCTCTATTTTGTTGCT+TGG | - | chr2_1:66816425-66816444 | None:intergenic | 25.0% |
| ! | AACAAAATAGAGAAAAACAG+AGG | + | chr2_1:66816428-66816447 | Msa0219290:intron | 25.0% |
| !! | ATCAAATCTGTGAATCTTTT+GGG | - | chr2_1:66816614-66816633 | None:intergenic | 25.0% |
| ! | AATGTGTTTACTTCTCATAT+CGG | + | chr2_1:66816698-66816717 | Msa0219290:intron | 25.0% |
| ! | CTGAAATTCTCTTTAAATGA+TGG | + | chr2_1:66816992-66817011 | Msa0219290:intron | 25.0% |
| ! | TGTTTCTTAATTCCTTCAAA+AGG | + | chr2_1:66817245-66817264 | Msa0219290:three_prime_UTR | 25.0% |
| !!! | CAGCATATTTTGATATTTGT+CGG | - | chr2_1:66817386-66817405 | None:intergenic | 25.0% |
| ! | GACAAATATCAAAATATGCT+GGG | + | chr2_1:66817385-66817404 | Msa0219290:three_prime_UTR | 25.0% |
| ! | AAGAAGTTTGTGAAGAAAAT+GGG | + | chr2_1:66817442-66817461 | Msa0219290:three_prime_UTR | 25.0% |
| AAATTCATTATCGATCTGTG+AGG | - | chr2_1:66813563-66813582 | None:intergenic | 30.0% | |
| AATTGAAAGGAGAAGACTTA+CGG | - | chr2_1:66813609-66813628 | None:intergenic | 30.0% | |
| GAAATGAGAGTGAAATTGAA+AGG | - | chr2_1:66813622-66813641 | None:intergenic | 30.0% | |
| GGTTAAGTAATTGAAGATGA+TGG | - | chr2_1:66813654-66813673 | None:intergenic | 30.0% | |
| TCTTTGTAAGTTGTAGCTTA+TGG | + | chr2_1:66813755-66813774 | Msa0219290:intron | 30.0% | |
| !! | TTTGATTTTGAATGTGGAAC+AGG | + | chr2_1:66813781-66813800 | Msa0219290:intron | 30.0% |
| AACAAGAAAACAAGCAACAT+AGG | - | chr2_1:66813848-66813867 | None:intergenic | 30.0% | |
| TGAAGAAACTGTTAAAGAGA+AGG | + | chr2_1:66813973-66813992 | Msa0219290:CDS | 30.0% | |
| !!! | AATTGGTAGGTTTAGTTTTG+CGG | + | chr2_1:66814078-66814097 | Msa0219290:intron | 30.0% |
| GAGCGTATAACAATAACAAT+AGG | - | chr2_1:66814182-66814201 | None:intergenic | 30.0% | |
| TTATTGTTATACGCTCTGTT+TGG | + | chr2_1:66814186-66814205 | Msa0219290:intron | 30.0% | |
| !! | TAAGTTTTGTGAGACTGTTA+GGG | - | chr2_1:66814393-66814412 | None:intergenic | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+AGG | - | chr2_1:66814394-66814413 | None:intergenic | 30.0% |
| GCTTATTTGAGCTTATATAC+TGG | - | chr2_1:66814418-66814437 | None:intergenic | 30.0% | |
| ACGTAGTCATACAATACATA+GGG | - | chr2_1:66814454-66814473 | None:intergenic | 30.0% | |
| TACGTAGTCATACAATACAT+AGG | - | chr2_1:66814455-66814474 | None:intergenic | 30.0% | |
| ATGTATTGTATGACTACGTA+AGG | + | chr2_1:66814455-66814474 | Msa0219290:intron | 30.0% | |
| TGTATTGTATGACTACGTAA+GGG | + | chr2_1:66814456-66814475 | Msa0219290:intron | 30.0% | |
| ATGGCAATATGACATAGTTT+GGG | + | chr2_1:66814501-66814520 | Msa0219290:intron | 30.0% | |
| ! | TTTGTCAAGCAATTGTTTTC+CGG | - | chr2_1:66814657-66814676 | None:intergenic | 30.0% |
| TTGTTAGTACAAGGAATATG+GGG | - | chr2_1:66814755-66814774 | None:intergenic | 30.0% | |
| CAAATCTTCGTTATGAAGAA+GGG | - | chr2_1:66814874-66814893 | None:intergenic | 30.0% | |
| ACAAATCTTCGTTATGAAGA+AGG | - | chr2_1:66814875-66814894 | None:intergenic | 30.0% | |
| ! | TTCTTTTTGGACTTCTTAAC+AGG | - | chr2_1:66814984-66815003 | None:intergenic | 30.0% |
| !!! | AAGAAAGTTTATTTTGGCAG+TGG | + | chr2_1:66814999-66815018 | Msa0219290:intron | 30.0% |
| !! | AGTCAATTTCTAAAGTTCCA+AGG | - | chr2_1:66815036-66815055 | None:intergenic | 30.0% |
| !! | TATTTTGAACAGATCATTGG+TGG | + | chr2_1:66815239-66815258 | Msa0219290:intron | 30.0% |
| AAAAGATCACACAAAAAGAG+AGG | - | chr2_1:66815297-66815316 | None:intergenic | 30.0% | |
| ! | TCTCTTTTTGTGTGATCTTT+TGG | + | chr2_1:66815296-66815315 | Msa0219290:intron | 30.0% |
| ! | CTCTTTTTGTGTGATCTTTT+GGG | + | chr2_1:66815297-66815316 | Msa0219290:intron | 30.0% |
| ! | TGTTTGGTATTCTCTTTTCA+AGG | + | chr2_1:66815325-66815344 | Msa0219290:intron | 30.0% |
| !!! | TTTTCAGAGCTCTAGTTTTA+GGG | - | chr2_1:66815383-66815402 | None:intergenic | 30.0% |
| TGAAATCAAGATGAGTGATT+TGG | + | chr2_1:66815450-66815469 | Msa0219290:intron | 30.0% | |
| ! | TGATTTGGAATTAACAGTGT+TGG | + | chr2_1:66815465-66815484 | Msa0219290:intron | 30.0% |
| TGGAATTTGGAAGCTATATA+TGG | + | chr2_1:66815488-66815507 | Msa0219290:intron | 30.0% | |
| ATATCAATAGAGACATACTC+CGG | + | chr2_1:66815520-66815539 | Msa0219290:intron | 30.0% | |
| ! | TTGTTGCTTATATTCGAAAC+CGG | - | chr2_1:66815542-66815561 | None:intergenic | 30.0% |
| AGCAACAAAAAAGTCATGTT+TGG | + | chr2_1:66815554-66815573 | Msa0219290:intron | 30.0% | |
| AACAAAAAAGTCATGTTTGG+TGG | + | chr2_1:66815557-66815576 | Msa0219290:intron | 30.0% | |
| ATATTACCAAAGTGTGTGAT+TGG | + | chr2_1:66815766-66815785 | Msa0219290:intron | 30.0% | |
| TATTACCAAAGTGTGTGATT+GGG | + | chr2_1:66815767-66815786 | Msa0219290:intron | 30.0% | |
| !! | TGATTGGGTTTTAATCTGAT+TGG | + | chr2_1:66815782-66815801 | Msa0219290:intron | 30.0% |
| !! | AGTTCTAAATGGCTAAGAAT+TGG | - | chr2_1:66815867-66815886 | None:intergenic | 30.0% |
| !! | TTAGCCTTTTTGGTATTCAT+TGG | + | chr2_1:66815942-66815961 | Msa0219290:intron | 30.0% |
| AATGCCAATGAATACCAAAA+AGG | - | chr2_1:66815949-66815968 | None:intergenic | 30.0% | |
| TGTTTGTTTCCTTCACATTT+CGG | + | chr2_1:66816051-66816070 | Msa0219290:intron | 30.0% | |
| TAAAATTTGCCGAAATGTGA+AGG | - | chr2_1:66816063-66816082 | None:intergenic | 30.0% | |
| !! | GGTGAGAAAATTCTAGAATT+AGG | - | chr2_1:66816138-66816157 | None:intergenic | 30.0% |
| TGAAAATACCCACTCAAAAT+GGG | - | chr2_1:66816189-66816208 | None:intergenic | 30.0% | |
| TTGAAAATACCCACTCAAAA+TGG | - | chr2_1:66816190-66816209 | None:intergenic | 30.0% | |
| TCGTGTTTACTTTCTTTAAC+CGG | - | chr2_1:66816272-66816291 | None:intergenic | 30.0% | |
| TTGATAGAGTTGAGTGAAAT+AGG | + | chr2_1:66816330-66816349 | Msa0219290:intron | 30.0% | |
| AGAAAATAGACGAAAAACAG+AGG | + | chr2_1:66816356-66816375 | Msa0219290:intron | 30.0% | |
| AGATAATAGAGGAAAAACAG+AGG | + | chr2_1:66816397-66816416 | Msa0219290:intron | 30.0% | |
| ! | CATCAAATCTGTGAATCTTT+TGG | - | chr2_1:66816615-66816634 | None:intergenic | 30.0% |
| TATTAATATGAGAAGGGCAA+TGG | - | chr2_1:66816743-66816762 | None:intergenic | 30.0% | |
| !!! | TCTGCAGATTATTTTAGTAC+AGG | + | chr2_1:66817020-66817039 | Msa0219290:intron | 30.0% |
| ! | CTTACAACAATTCCTTTTGA+AGG | - | chr2_1:66817260-66817279 | None:intergenic | 30.0% |
| CGACAAATATCAAAATATGC+TGG | + | chr2_1:66817384-66817403 | Msa0219290:three_prime_UTR | 30.0% | |
| CAAGAAGTTTGTGAAGAAAA+TGG | + | chr2_1:66817441-66817460 | Msa0219290:three_prime_UTR | 30.0% | |
| GAGGAGGAAAGATATAGAAA+CGG | - | chr2_1:66813477-66813496 | None:intergenic | 35.0% | |
| TATTAGGAGGAATCATGTCA+AGG | + | chr2_1:66813822-66813841 | Msa0219290:exon | 35.0% | |
| TACATAGGGCCTATTTAGAT+TGG | - | chr2_1:66814440-66814459 | None:intergenic | 35.0% | |
| CATGGCAATATGACATAGTT+TGG | + | chr2_1:66814500-66814519 | Msa0219290:intron | 35.0% | |
| CATAAATCTCATCTTGCACA+TGG | + | chr2_1:66814564-66814583 | Msa0219290:intron | 35.0% | |
| CAGTATAAATAACGCTTGAG+TGG | - | chr2_1:66814610-66814629 | None:intergenic | 35.0% | |
| !!! | TATGGGGTTTTGTTGCTAAT+GGG | - | chr2_1:66814739-66814758 | None:intergenic | 35.0% |
| !!! | ATATGGGGTTTTGTTGCTAA+TGG | - | chr2_1:66814740-66814759 | None:intergenic | 35.0% |
| ! | GGTTTGAAGTTAACTATAGG+TGG | - | chr2_1:66814799-66814818 | None:intergenic | 35.0% |
| TTGTAATGCCACAAAAGTGA+AGG | - | chr2_1:66814907-66814926 | None:intergenic | 35.0% | |
| ! | CTTTTGTGGCATTACAATGA+TGG | + | chr2_1:66814910-66814929 | Msa0219290:intron | 35.0% |
| CATGCTAGCAAGTAACTTAA+GGG | - | chr2_1:66815114-66815133 | None:intergenic | 35.0% | |
| ! | CTTAAGTTACTTGCTAGCAT+GGG | + | chr2_1:66815113-66815132 | Msa0219290:intron | 35.0% |
| TATCACATAATGCAGGCTTA+GGG | - | chr2_1:66815221-66815240 | None:intergenic | 35.0% | |
| ATATCACATAATGCAGGCTT+AGG | - | chr2_1:66815222-66815241 | None:intergenic | 35.0% | |
| ! | TTTTTGTGTGATCTTTTGGG+AGG | + | chr2_1:66815300-66815319 | Msa0219290:intron | 35.0% |
| !! | TTTTGTGTGATCTTTTGGGA+GGG | + | chr2_1:66815301-66815320 | Msa0219290:intron | 35.0% |
| !!! | TTTCAGAGCTCTAGTTTTAG+GGG | - | chr2_1:66815382-66815401 | None:intergenic | 35.0% |
| !!! | GTTTTCAGAGCTCTAGTTTT+AGG | - | chr2_1:66815384-66815403 | None:intergenic | 35.0% |
| ! | TTTGGAATTAACAGTGTTGG+TGG | + | chr2_1:66815468-66815487 | Msa0219290:intron | 35.0% |
| !! | TTAACAGTGTTGGTGGAATT+TGG | + | chr2_1:66815475-66815494 | Msa0219290:intron | 35.0% |
| TTTGGAAGCTATATATGGCT+TGG | + | chr2_1:66815493-66815512 | Msa0219290:intron | 35.0% | |
| TAAAACCCAATCACACACTT+TGG | - | chr2_1:66815775-66815794 | None:intergenic | 35.0% | |
| AGAATTGGTAAGATGTGCAA+AGG | - | chr2_1:66815852-66815871 | None:intergenic | 35.0% | |
| ! | TAACTTGGAGCTTTTTGCTT+GGG | + | chr2_1:66815906-66815925 | Msa0219290:intron | 35.0% |
| ATTAGGAAATGAGAGAGAGA+TGG | - | chr2_1:66816121-66816140 | None:intergenic | 35.0% | |
| GGTTAAAGAAAGTAAACACG+AGG | + | chr2_1:66816271-66816290 | Msa0219290:intron | 35.0% | |
| ATGTTAGATCCTCAGTAGTT+AGG | - | chr2_1:66816580-66816599 | None:intergenic | 35.0% | |
| !! | AATCTGTGAATCTTTTGGGT+GGG | - | chr2_1:66816610-66816629 | None:intergenic | 35.0% |
| ! | AAATCTGTGAATCTTTTGGG+TGG | - | chr2_1:66816611-66816630 | None:intergenic | 35.0% |
| TTGTGTTTCCTTGCACAAAT+CGG | - | chr2_1:66816645-66816664 | None:intergenic | 35.0% | |
| GTTTACTTCTCATATCGGTA+AGG | + | chr2_1:66816703-66816722 | Msa0219290:intron | 35.0% | |
| ! | GAATATTACTAGTGCTACTC+TGG | - | chr2_1:66816787-66816806 | None:intergenic | 35.0% |
| GAAGACTTAATGAACTTGTG+CGG | + | chr2_1:66817055-66817074 | Msa0219290:CDS | 35.0% | |
| GGAACTATAAATAGCACTGT+AGG | + | chr2_1:66817117-66817136 | Msa0219290:CDS | 35.0% | |
| ! | TGAGCGACAACAAATTTTAG+AGG | + | chr2_1:66817167-66817186 | Msa0219290:CDS | 35.0% |
| AGTTTGTGAAGAAAATGGGT+TGG | + | chr2_1:66817446-66817465 | Msa0219290:three_prime_UTR | 35.0% | |
| ATCGATCTGTGAGGAGTTTA+GGG | - | chr2_1:66813554-66813573 | None:intergenic | 40.0% | |
| TATCGATCTGTGAGGAGTTT+AGG | - | chr2_1:66813555-66813574 | None:intergenic | 40.0% | |
| !! | CTTACGGAAGAGTGTTATTG+AGG | - | chr2_1:66813593-66813612 | None:intergenic | 40.0% |
| TAATCACTTCGCAATTCGAG+TGG | + | chr2_1:66813879-66813898 | Msa0219290:CDS | 40.0% | |
| CATTGACAAGATTGTGCACA+TGG | + | chr2_1:66814482-66814501 | Msa0219290:intron | 40.0% | |
| CTTCTTAACAGGTTCCATCA+GGG | - | chr2_1:66814973-66814992 | None:intergenic | 40.0% | |
| ACTTCTTAACAGGTTCCATC+AGG | - | chr2_1:66814974-66814993 | None:intergenic | 40.0% | |
| CCATGCTAGCAAGTAACTTA+AGG | - | chr2_1:66815115-66815134 | None:intergenic | 40.0% | |
| ! | CCTTAAGTTACTTGCTAGCA+TGG | + | chr2_1:66815112-66815131 | Msa0219290:intron | 40.0% |
| ! | AAGAGAGGCAGCTTTTAATG+TGG | - | chr2_1:66815282-66815301 | None:intergenic | 40.0% |
| !! | TTTGTGTGATCTTTTGGGAG+GGG | + | chr2_1:66815302-66815321 | Msa0219290:intron | 40.0% |
| CCAGACTCATTGACAATCTT+AGG | - | chr2_1:66815415-66815434 | None:intergenic | 40.0% | |
| CCTAAGATTGTCAATGAGTC+TGG | + | chr2_1:66815412-66815431 | Msa0219290:intron | 40.0% | |
| TATGGAACAAGTTCCCATGA+TGG | + | chr2_1:66815684-66815703 | Msa0219290:intron | 40.0% | |
| ATGGAACAAGTTCCCATGAT+GGG | + | chr2_1:66815685-66815704 | Msa0219290:intron | 40.0% | |
| TTCCTCAAATTGCCCATCAT+GGG | - | chr2_1:66815700-66815719 | None:intergenic | 40.0% | |
| ATTCCTCAAATTGCCCATCA+TGG | - | chr2_1:66815701-66815720 | None:intergenic | 40.0% | |
| ! | GTAACTTGGAGCTTTTTGCT+TGG | + | chr2_1:66815905-66815924 | Msa0219290:intron | 40.0% |
| ! | AACTTGGAGCTTTTTGCTTG+GGG | + | chr2_1:66815907-66815926 | Msa0219290:intron | 40.0% |
| TGGCTGAAAATAAGAGAGAG+CGG | - | chr2_1:66816101-66816120 | None:intergenic | 40.0% | |
| TAACAGAATGGGAGAGTAGT+GGG | - | chr2_1:66816159-66816178 | None:intergenic | 40.0% | |
| ! | ACTACATTGGTTAGGAGGAT+AGG | - | chr2_1:66816218-66816237 | None:intergenic | 40.0% |
| ATCGAGATCCTACATAGGAT+CGG | + | chr2_1:66816242-66816261 | Msa0219290:intron | 40.0% | |
| ACGTAACACAGTTCGTAAGT+AGG | + | chr2_1:66816295-66816314 | Msa0219290:intron | 40.0% | |
| ACACAGTTCGTAAGTAGGAT+TGG | + | chr2_1:66816300-66816319 | Msa0219290:intron | 40.0% | |
| ! | AGTTCGTAAGTAGGATTGGT+AGG | + | chr2_1:66816304-66816323 | Msa0219290:intron | 40.0% |
| GAGAAAAACAGAGGAAACAG+AGG | + | chr2_1:66816437-66816456 | Msa0219290:intron | 40.0% | |
| AGGAAACTGGCAAAAAACAG+AGG | + | chr2_1:66816457-66816476 | Msa0219290:intron | 40.0% | |
| GAAACAGAGCAAAAACGAAC+CGG | + | chr2_1:66816479-66816498 | Msa0219290:intron | 40.0% | |
| !! | ATCTGTGAATCTTTTGGGTG+GGG | - | chr2_1:66816609-66816628 | None:intergenic | 40.0% |
| !! | GAATTTCACCGATTTGTGCA+AGG | + | chr2_1:66816634-66816653 | Msa0219290:intron | 40.0% |
| ATATGAGAAGGGCAATGGAT+TGG | - | chr2_1:66816738-66816757 | None:intergenic | 40.0% | |
| ! | GCTACTCTGGAAATAGAGTA+TGG | - | chr2_1:66816774-66816793 | None:intergenic | 40.0% |
| GCTTCATTAACATGCTGCAA+AGG | - | chr2_1:66817199-66817218 | None:intergenic | 40.0% | |
| AATGATAAACGCGGTGGTTG+AGG | - | chr2_1:66813441-66813460 | None:intergenic | 45.0% | |
| TGACGTGGCAATGATAAACG+CGG | - | chr2_1:66813450-66813469 | None:intergenic | 45.0% | |
| TATAGAAACGGAGAGTGACG+TGG | - | chr2_1:66813465-66813484 | None:intergenic | 45.0% | |
| GAGAAAGTAAGTTTGGGAGG+AGG | - | chr2_1:66813493-66813512 | None:intergenic | 45.0% | |
| GGTGAGAAAGTAAGTTTGGG+AGG | - | chr2_1:66813496-66813515 | None:intergenic | 45.0% | |
| GGGGGTGAGAAAGTAAGTTT+GGG | - | chr2_1:66813499-66813518 | None:intergenic | 45.0% | |
| TTCCTCAGAGTGTGAGGTTA+GGG | - | chr2_1:66813520-66813539 | None:intergenic | 45.0% | |
| TTTCCTCAGAGTGTGAGGTT+AGG | - | chr2_1:66813521-66813540 | None:intergenic | 45.0% | |
| GACTCAACATCAGACACAAG+TGG | - | chr2_1:66813911-66813930 | None:intergenic | 45.0% | |
| TTGCACATGGCTTATGTCTC+AGG | + | chr2_1:66814577-66814596 | Msa0219290:intron | 45.0% | |
| TGCACATGGCTTATGTCTCA+GGG | + | chr2_1:66814578-66814597 | Msa0219290:intron | 45.0% | |
| ACCATCAAACTCACTGCCTA+GGG | + | chr2_1:66814705-66814724 | Msa0219290:intron | 45.0% | |
| !! | CTAATGGGTTTCAGTTCCCT+AGG | - | chr2_1:66814724-66814743 | None:intergenic | 45.0% |
| !! | TTCTTGGGCCTTCACTTTTG+TGG | + | chr2_1:66814896-66814915 | Msa0219290:intron | 45.0% |
| CAGTGGTGCATTTAACACCT+TGG | + | chr2_1:66815016-66815035 | Msa0219290:intron | 45.0% | |
| TAGGACAGCGTTTGAAAGCT+TGG | - | chr2_1:66815160-66815179 | None:intergenic | 45.0% | |
| !! | TTCCCATGATGGGCAATTTG+AGG | + | chr2_1:66815695-66815714 | Msa0219290:intron | 45.0% |
| GGCTGAAAATAAGAGAGAGC+GGG | - | chr2_1:66816100-66816119 | None:intergenic | 45.0% | |
| CTAACAGAATGGGAGAGTAG+TGG | - | chr2_1:66816160-66816179 | None:intergenic | 45.0% | |
| TGGGCTGCAACTAACAGAAT+GGG | - | chr2_1:66816170-66816189 | None:intergenic | 45.0% | |
| ! | ATGGGCTGCAACTAACAGAA+TGG | - | chr2_1:66816171-66816190 | None:intergenic | 45.0% |
| ! | TAGTTGCAGCCCATTTTGAG+TGG | + | chr2_1:66816177-66816196 | Msa0219290:intron | 45.0% |
| !! | AGTTGCAGCCCATTTTGAGT+GGG | + | chr2_1:66816178-66816197 | Msa0219290:intron | 45.0% |
| TCCTCCTAACCAATGTAGTC+AGG | + | chr2_1:66816219-66816238 | Msa0219290:intron | 45.0% | |
| ! | TCCTGACTACATTGGTTAGG+AGG | - | chr2_1:66816223-66816242 | None:intergenic | 45.0% |
| ! | CGATCCTGACTACATTGGTT+AGG | - | chr2_1:66816226-66816245 | None:intergenic | 45.0% |
| GATCTCGATCCTGACTACAT+TGG | - | chr2_1:66816231-66816250 | None:intergenic | 45.0% | |
| TCAGGATCGAGATCCTACAT+AGG | + | chr2_1:66816237-66816256 | Msa0219290:intron | 45.0% | |
| AGATCCTACATAGGATCGGT+CGG | + | chr2_1:66816246-66816265 | Msa0219290:intron | 45.0% | |
| ACAGAGGAAACAGAGGAAAC+TGG | + | chr2_1:66816444-66816463 | Msa0219290:intron | 45.0% | |
| TAGTTAGGAGCAGTGTAGTC+AGG | - | chr2_1:66816565-66816584 | None:intergenic | 45.0% | |
| TACACTGCTCCTAACTACTG+AGG | + | chr2_1:66816568-66816587 | Msa0219290:intron | 45.0% | |
| !! | TCTGTGAATCTTTTGGGTGG+GGG | - | chr2_1:66816608-66816627 | None:intergenic | 45.0% |
| TCAAGAATCCGCTCAGTTAG+AGG | - | chr2_1:66817144-66817163 | None:intergenic | 45.0% | |
| !!! | AAAATAAAATCTAATTTTTA+AGG | - | chr2_1:66815645-66815664 | None:intergenic | 5.0% |
| !!! | TATTTATTTGTTATAAAATT+TGG | - | chr2_1:66816943-66816962 | None:intergenic | 5.0% |
| ! | AGCAGAGTAACGCGTTTTCG+AGG | - | chr2_1:66813368-66813387 | None:intergenic | 50.0% |
| AAAACGCGTTACTCTGCTGC+AGG | + | chr2_1:66813370-66813389 | Msa0219290:five_prime_UTR | 50.0% | |
| TTGGGAAGTGAAAGCGACGA+CGG | - | chr2_1:66813414-66813433 | None:intergenic | 50.0% | |
| ATAAACGCGGTGGTTGAGGT+CGG | - | chr2_1:66813437-66813456 | None:intergenic | 50.0% | |
| GGGGGGTGAGAAAGTAAGTT+TGG | - | chr2_1:66813500-66813519 | None:intergenic | 50.0% | |
| TCCTCAGAGTGTGAGGTTAG+GGG | - | chr2_1:66813519-66813538 | None:intergenic | 50.0% | |
| ! | ACCTCACACTCTGAGGAAAG+AGG | + | chr2_1:66813522-66813541 | Msa0219290:five_prime_UTR | 50.0% |
| ! | CCTCACACTCTGAGGAAAGA+GGG | + | chr2_1:66813523-66813542 | Msa0219290:five_prime_UTR | 50.0% |
| ! | CTCACACTCTGAGGAAAGAG+GGG | + | chr2_1:66813524-66813543 | Msa0219290:five_prime_UTR | 50.0% |
| ! | TCACACTCTGAGGAAAGAGG+GGG | + | chr2_1:66813525-66813544 | Msa0219290:five_prime_UTR | 50.0% |
| ACATGGCTTATGTCTCAGGG+TGG | + | chr2_1:66814581-66814600 | Msa0219290:intron | 50.0% | |
| CACCATCAAACTCACTGCCT+AGG | + | chr2_1:66814704-66814723 | Msa0219290:intron | 50.0% | |
| TCCCTAGGCAGTGAGTTTGA+TGG | - | chr2_1:66814709-66814728 | None:intergenic | 50.0% | |
| !!! | GATCTTTTGGGAGGGGTGTT+TGG | + | chr2_1:66815309-66815328 | Msa0219290:intron | 50.0% |
| !!! | CAGAGCTCTAGTTTTAGGGG+AGG | - | chr2_1:66815379-66815398 | None:intergenic | 50.0% |
| ACCGGAGTAAAGTCGAAGCA+CGG | + | chr2_1:66816497-66816516 | Msa0219290:intron | 50.0% | |
| ACCGTGCTTCGACTTTACTC+CGG | - | chr2_1:66816501-66816520 | None:intergenic | 50.0% | |
| !! | TGTGAATCTTTTGGGTGGGG+GGG | - | chr2_1:66816606-66816625 | None:intergenic | 50.0% |
| !! | CTGTGAATCTTTTGGGTGGG+GGG | - | chr2_1:66816607-66816626 | None:intergenic | 50.0% |
| TGAACTTGTGCGGCATCTTC+AGG | + | chr2_1:66817065-66817084 | Msa0219290:CDS | 50.0% | |
| GAACAACTGCAGCAGTGCAA+AGG | + | chr2_1:66817087-66817106 | Msa0219290:CDS | 50.0% | |
| CAGCAGTGCAAAGGAAGCAA+TGG | + | chr2_1:66817096-66817115 | Msa0219290:CDS | 50.0% | |
| CTGTAGGTCCTCTAACTGAG+CGG | + | chr2_1:66817133-66817152 | Msa0219290:CDS | 50.0% | |
| CGTGGCAATGATAAACGCGG+TGG | - | chr2_1:66813447-66813466 | None:intergenic | 55.0% | |
| CTCAGAGTGTGAGGTTAGGG+GGG | - | chr2_1:66813517-66813536 | None:intergenic | 55.0% | |
| CCTCAGAGTGTGAGGTTAGG+GGG | - | chr2_1:66813518-66813537 | None:intergenic | 55.0% | |
| CCCTCTTTCCTCAGAGTGTG+AGG | - | chr2_1:66813526-66813545 | None:intergenic | 55.0% | |
| ! | CAGGTTCCATCAGGGCACTA+GGG | - | chr2_1:66814965-66814984 | None:intergenic | 55.0% |
| ! | ACAGGTTCCATCAGGGCACT+AGG | - | chr2_1:66814966-66814985 | None:intergenic | 55.0% |
| GTAAAGTCGAAGCACGGTCG+AGG | + | chr2_1:66816503-66816522 | Msa0219290:intron | 55.0% | |
| GTGTAGTCAGGATCGAGTGC+TGG | - | chr2_1:66816553-66816572 | None:intergenic | 55.0% | |
| CCCCCTAACCTCACACTCTG+AGG | + | chr2_1:66813515-66813534 | Msa0219290:five_prime_UTR | 60.0% | |
| CAAGTGCCCTAGTGCCCTGA+TGG | + | chr2_1:66814956-66814975 | Msa0219290:intron | 60.0% | |
| CCTACATAGGATCGGTCGGC+CGG | + | chr2_1:66816250-66816269 | Msa0219290:intron | 60.0% | |
| CGCGGTGGTTGAGGTCGGTT+GGG | - | chr2_1:66813432-66813451 | None:intergenic | 65.0% | |
| ACGCGGTGGTTGAGGTCGGT+TGG | - | chr2_1:66813433-66813452 | None:intergenic | 65.0% | |
| CCGGCCGACCGATCCTATGT+AGG | - | chr2_1:66816253-66816272 | None:intergenic | 65.0% | |
| !! | GAAGCACGGTCGAGGTGCTG+TGG | + | chr2_1:66816511-66816530 | Msa0219290:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 66813326 | 66817470 | 66813326 | ID=Msa0219290;Name=Msa0219290 |
| chr2_1 | mRNA | 66813326 | 66817470 | 66813326 | ID=Msa0219290-mRNA-1;Parent=Msa0219290;Name=Msa0219290-mRNA-1;_AED=0.35;_eAED=0.35;_QI=315|1|1|1|0.5|0.33|3|276|108 |
| chr2_1 | exon | 66813326 | 66813607 | 66813326 | ID=Msa0219290-mRNA-1:exon:18869;Parent=Msa0219290-mRNA-1 |
| chr2_1 | exon | 66813803 | 66813994 | 66813803 | ID=Msa0219290-mRNA-1:exon:18870;Parent=Msa0219290-mRNA-1 |
| chr2_1 | exon | 66817027 | 66817470 | 66817027 | ID=Msa0219290-mRNA-1:exon:18871;Parent=Msa0219290-mRNA-1 |
| chr2_1 | five_prime_UTR | 66813326 | 66813607 | 66813326 | ID=Msa0219290-mRNA-1:five_prime_utr;Parent=Msa0219290-mRNA-1 |
| chr2_1 | five_prime_UTR | 66813803 | 66813835 | 66813803 | ID=Msa0219290-mRNA-1:five_prime_utr;Parent=Msa0219290-mRNA-1 |
| chr2_1 | CDS | 66813836 | 66813994 | 66813836 | ID=Msa0219290-mRNA-1:cds;Parent=Msa0219290-mRNA-1 |
| chr2_1 | CDS | 66817027 | 66817194 | 66817027 | ID=Msa0219290-mRNA-1:cds;Parent=Msa0219290-mRNA-1 |
| chr2_1 | three_prime_UTR | 66817195 | 66817470 | 66817195 | ID=Msa0219290-mRNA-1:three_prime_utr;Parent=Msa0219290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
