Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298390 | XP_024633260.1 | 100.000 | 108 | 0 | 0 | 1 | 108 | 1 | 108 | 1.79e-69 | 213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298390 | A0A396JEH2 | 100.000 | 108 | 0 | 0 | 1 | 108 | 1 | 108 | 8.53e-70 | 213 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0219290 | Msa0298390 | 0.964180 | 5.285799e-123 | -8.615850e-47 |
| Msa0226890 | Msa0298390 | -0.806249 | 9.016330e-50 | -8.615850e-47 |
| Msa0238070 | Msa0298390 | 0.835438 | 1.677903e-56 | -8.615850e-47 |
| Msa0244270 | Msa0298390 | -0.806268 | 8.931268e-50 | -8.615850e-47 |
| Msa0258920 | Msa0298390 | 0.979026 | 4.495767e-147 | -8.615850e-47 |
| Msa0298390 | Msa0358170 | -0.803836 | 2.882637e-49 | -8.615850e-47 |
| Msa0298390 | Msa0380040 | -0.810307 | 1.230250e-50 | -8.615850e-47 |
| Msa0298390 | Msa0430620 | -0.804022 | 2.636641e-49 | -8.615850e-47 |
| Msa0298390 | Msa0475580 | -0.802734 | 4.874977e-49 | -8.615850e-47 |
| Msa0298390 | Msa0519220 | -0.807869 | 4.094865e-50 | -8.615850e-47 |
| Msa0298390 | Msa0673010 | 0.844660 | 6.588962e-59 | -8.615850e-47 |
| Msa0298390 | Msa0713790 | -0.810221 | 1.283703e-50 | -8.615850e-47 |
| Msa0298390 | Msa0743720 | -0.810333 | 1.214496e-50 | -8.615850e-47 |
| Msa0298390 | Msa0756030 | -0.809020 | 2.326054e-50 | -8.615850e-47 |
| Msa0298390 | Msa0777050 | -0.802503 | 5.438922e-49 | -8.615850e-47 |
| Msa0298390 | Msa0824680 | -0.822778 | 1.974096e-53 | -8.615850e-47 |
| Msa0298390 | Msa0837660 | -0.802605 | 5.181771e-49 | -8.615850e-47 |
| Msa0298390 | Msa0950320 | -0.802303 | 5.981980e-49 | -8.615850e-47 |
| Msa0298390 | Msa1260130 | -0.801109 | 1.051376e-48 | -8.615850e-47 |
| Msa0298390 | Msa1288320 | 0.800397 | 1.468854e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298390 | MtrunA17_Chr2g0321751 | 100.000 | 108 | 0 | 0 | 1 | 108 | 1 | 108 | 1.64e-73 | 213 |
| Msa0298390 | MtrunA17_Chr4g0025951 | 68.354 | 79 | 25 | 0 | 13 | 91 | 14 | 92 | 1.33e-33 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298390 | AT5G22280.1 | 56.881 | 109 | 45 | 2 | 1 | 108 | 1 | 108 | 1.96e-36 | 120 |
| Msa0298390 | AT5G22280.2 | 50.526 | 95 | 45 | 2 | 15 | 108 | 7 | 100 | 9.39e-25 | 90.1 |
| Msa0298390 | AT3G44280.1 | 59.259 | 108 | 42 | 2 | 1 | 107 | 1 | 107 | 1.30e-22 | 85.1 |
| Msa0298390 | AT5G22280.3 | 50.704 | 71 | 34 | 1 | 1 | 71 | 1 | 70 | 6.57e-17 | 71.2 |
| Msa0298390 | AT5G06265.1 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0298390 | AT5G06265.6 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0298390 | AT5G06265.5 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0298390 | AT5G06265.8 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0298390 | AT5G06265.2 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0298390 | AT5G06265.9 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0298390 | AT5G06265.3 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0298390 | AT5G06265.10 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0298390 | AT5G06265.7 | 43.182 | 88 | 44 | 2 | 1 | 83 | 1 | 87 | 4.92e-16 | 68.2 |
| Msa0298390 | AT5G06265.4 | 43.182 | 88 | 44 | 2 | 1 | 83 | 62 | 148 | 1.80e-15 | 68.2 |
Find 50 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAGTTTGTGAAGAAAA+TGG | 0.176262 | 2_3:-52364313 | Msa0298390:three_prime_UTR |
| TATCGATCTGTGAGGAGTTT+AGG | 0.214733 | 2_3:+52368201 | None:intergenic |
| TTGATACTGTAATTATTATT+AGG | 0.241356 | 2_3:-52367947 | Msa0298390:five_prime_UTR |
| ATCGATCTGTGAGGAGTTTA+GGG | 0.278250 | 2_3:+52368202 | None:intergenic |
| TAACTCTATTCTTAACAAAA+TGG | 0.283953 | 2_3:+52364346 | None:intergenic |
| TTCCTCAGAGTGTGAGGTTA+GGG | 0.297890 | 2_3:+52368236 | None:intergenic |
| TGAACTTGTGCGGCATCTTC+AGG | 0.299337 | 2_3:-52364689 | Msa0298390:CDS |
| TCAAGAATCCGCTCAGTTAG+AGG | 0.329822 | 2_3:+52364613 | None:intergenic |
| TTTCCTCAGAGTGTGAGGTT+AGG | 0.356265 | 2_3:+52368235 | None:intergenic |
| ATGAAGTTTGTGATATGTTA+TGG | 0.388157 | 2_3:+52368414 | None:intergenic |
| AAGAAGTTTGTGAAGAAAAT+GGG | 0.405182 | 2_3:-52364312 | Msa0298390:three_prime_UTR |
| CGCGGTGGTTGAGGTCGGTT+GGG | 0.441896 | 2_3:+52368324 | None:intergenic |
| CGACAAATATCAAAATATGC+TGG | 0.465046 | 2_3:-52364370 | Msa0298390:three_prime_UTR |
| TGTTTCTTAATTCCTTCAAA+AGG | 0.474668 | 2_3:-52364509 | Msa0298390:three_prime_UTR |
| AATGATAAACGCGGTGGTTG+AGG | 0.477744 | 2_3:+52368315 | None:intergenic |
| CCTCAGAGTGTGAGGTTAGG+GGG | 0.482994 | 2_3:+52368238 | None:intergenic |
| CTTACGGAAGAGTGTTATTG+AGG | 0.484074 | 2_3:+52368163 | None:intergenic |
| CCCTCTTTCCTCAGAGTGTG+AGG | 0.492429 | 2_3:+52368230 | None:intergenic |
| AAAACGCGTTACTCTGCTGC+AGG | 0.500325 | 2_3:-52368383 | Msa0298390:five_prime_UTR |
| ACGCGGTGGTTGAGGTCGGT+TGG | 0.500554 | 2_3:+52368323 | None:intergenic |
| GTGAAGAAAATGGGTTGGAA+AGG | 0.511830 | 2_3:-52364303 | None:intergenic |
| ATACTGTAATTATTATTAGG+AGG | 0.527928 | 2_3:-52367944 | Msa0298390:five_prime_UTR |
| GACAAATATCAAAATATGCT+GGG | 0.527963 | 2_3:-52364369 | Msa0298390:three_prime_UTR |
| GAGGAGGAAAGATATAGAAA+CGG | 0.533501 | 2_3:+52368279 | None:intergenic |
| GCTTCATTAACATGCTGCAA+AGG | 0.540262 | 2_3:+52364558 | None:intergenic |
| GGTGAGAAAGTAAGTTTGGG+AGG | 0.541097 | 2_3:+52368260 | None:intergenic |
| TGAAGAAACTGTTAAAGAGA+AGG | 0.542240 | 2_3:-52367780 | Msa0298390:intron |
| CTCAGAGTGTGAGGTTAGGG+GGG | 0.545358 | 2_3:+52368239 | None:intergenic |
| AACAAGAAAACAAGCAACAT+AGG | 0.548448 | 2_3:+52367908 | None:intergenic |
| CCTCACACTCTGAGGAAAGA+GGG | 0.549170 | 2_3:-52368230 | Msa0298390:five_prime_UTR |
| TCCTCAGAGTGTGAGGTTAG+GGG | 0.550882 | 2_3:+52368237 | None:intergenic |
| AGTTTGTGAAGAAAATGGGT+TGG | 0.557736 | 2_3:-52364308 | Msa0298390:three_prime_UTR |
| ACCTCACACTCTGAGGAAAG+AGG | 0.558960 | 2_3:-52368231 | Msa0298390:five_prime_UTR |
| CAGCAGTGCAAAGGAAGCAA+TGG | 0.562786 | 2_3:-52364658 | Msa0298390:CDS |
| GGAACTATAAATAGCACTGT+AGG | 0.564242 | 2_3:-52364637 | Msa0298390:CDS |
| TAATCACTTCGCAATTCGAG+TGG | 0.583936 | 2_3:-52367874 | Msa0298390:CDS |
| GAGAAAGTAAGTTTGGGAGG+AGG | 0.585973 | 2_3:+52368263 | None:intergenic |
| GAACAACTGCAGCAGTGCAA+AGG | 0.593769 | 2_3:-52364667 | Msa0298390:CDS |
| ATAAACGCGGTGGTTGAGGT+CGG | 0.596120 | 2_3:+52368319 | None:intergenic |
| TATTAGGAGGAATCATGTCA+AGG | 0.619548 | 2_3:-52367931 | Msa0298390:exon |
| GACTCAACATCAGACACAAG+TGG | 0.644435 | 2_3:+52367845 | None:intergenic |
| CTCACACTCTGAGGAAAGAG+GGG | 0.645340 | 2_3:-52368229 | Msa0298390:five_prime_UTR |
| GAAGACTTAATGAACTTGTG+CGG | 0.669388 | 2_3:-52364699 | Msa0298390:CDS |
| TTGGGAAGTGAAAGCGACGA+CGG | 0.677407 | 2_3:+52368342 | None:intergenic |
| TATAGAAACGGAGAGTGACG+TGG | 0.699564 | 2_3:+52368291 | None:intergenic |
| TCACACTCTGAGGAAAGAGG+GGG | 0.700157 | 2_3:-52368228 | Msa0298390:five_prime_UTR |
| CTGTAGGTCCTCTAACTGAG+CGG | 0.706930 | 2_3:-52364621 | Msa0298390:CDS |
| AAATTCATTATCGATCTGTG+AGG | 0.738628 | 2_3:+52368193 | None:intergenic |
| TGACGTGGCAATGATAAACG+CGG | 0.768474 | 2_3:+52368306 | None:intergenic |
| CGTGGCAATGATAAACGCGG+TGG | 0.769199 | 2_3:+52368309 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAATTTAGATTTGTTTT+GGG | + | chr2_3:52365517-52365536 | None:intergenic | 10.0% |
| !!! | TTTAAAATTTAGATTTGTTT+TGG | + | chr2_3:52365518-52365537 | None:intergenic | 10.0% |
| !! | ATATATTATTAATATGAGAA+GGG | + | chr2_3:52367728-52367747 | None:intergenic | 10.0% |
| !! | AATATATTATTAATATGAGA+AGG | + | chr2_3:52367729-52367748 | None:intergenic | 10.0% |
| !! | TTGATACTGTAATTATTATT+AGG | - | chr2_3:52364786-52364805 | Msa0298390:intron | 15.0% |
| !!! | TTTTCTTATCTTTTTATGTT+TGG | - | chr2_3:52364986-52365005 | Msa0298390:intron | 15.0% |
| !!! | CATTTTTAATCATTTTGTTA+AGG | + | chr2_3:52366794-52366813 | None:intergenic | 15.0% |
| !! | CTTAACAAAATGATTAAAAA+TGG | - | chr2_3:52366792-52366811 | Msa0298390:intron | 15.0% |
| !! | AACTGATAAATTACTTTATA+TGG | - | chr2_3:52366863-52366882 | Msa0298390:intron | 15.0% |
| !! | TAAAGTGGAAATTGAAATTA+GGG | + | chr2_3:52364655-52364674 | None:intergenic | 20.0% |
| !! | TTAAAGTGGAAATTGAAATT+AGG | + | chr2_3:52364656-52364675 | None:intergenic | 20.0% |
| !! | AAATGGTAAAGAAATTAAAG+TGG | + | chr2_3:52364670-52364689 | None:intergenic | 20.0% |
| !! | ATACTGTAATTATTATTAGG+AGG | - | chr2_3:52364789-52364808 | Msa0298390:intron | 20.0% |
| !! | AATGATAAATTTCTCTGTTT+AGG | - | chr2_3:52365019-52365038 | Msa0298390:intron | 20.0% |
| !!! | TATTTTTGTATAAGCTATCT+AGG | - | chr2_3:52365282-52365301 | Msa0298390:intron | 20.0% |
| !!! | TTTCATCTGAATATTTTTTC+CGG | - | chr2_3:52365615-52365634 | Msa0298390:intron | 20.0% |
| !!! | TCCAAAAAGAAAGTTTATTT+TGG | - | chr2_3:52365973-52365992 | Msa0298390:intron | 20.0% |
| !! | ACGTGTTAAGAAATTAAAAA+AGG | + | chr2_3:52366070-52366089 | None:intergenic | 20.0% |
| !!! | GGACACTAATTTTTTTTTTA+AGG | + | chr2_3:52366119-52366138 | None:intergenic | 20.0% |
| !!! | CAATAACCATTTTATTCTTA+TGG | - | chr2_3:52366646-52366665 | Msa0298390:intron | 20.0% |
| !!! | TTTTCTTAAAGTAATCAGAA+AGG | + | chr2_3:52366711-52366730 | None:intergenic | 20.0% |
| !!! | AGTAATTTATCAGTTCTAAA+TGG | + | chr2_3:52366858-52366877 | None:intergenic | 20.0% |
| !! | AATTACTTTATATGGTAACT+TGG | - | chr2_3:52366871-52366890 | Msa0298390:intron | 20.0% |
| !!! | ATATAACATTCTATTTTGCT+TGG | - | chr2_3:52367787-52367806 | Msa0298390:CDS | 20.0% |
| !!! | TTGTATTATCAGAAACATTT+TGG | - | chr2_3:52367845-52367864 | Msa0298390:CDS | 20.0% |
| !! | TAACAAATAAATATCTGTTG+TGG | - | chr2_3:52367929-52367948 | Msa0298390:exon | 20.0% |
| !! | TCAGTAAAATTAAAATAGCA+TGG | + | chr2_3:52367955-52367974 | None:intergenic | 20.0% |
| !! | TAACTCTATTCTTAACAAAA+TGG | + | chr2_3:52368390-52368409 | None:intergenic | 20.0% |
| ! | ATGAAGTTTGTGATATGTTA+TGG | + | chr2_3:52364322-52364341 | None:intergenic | 25.0% |
| !!! | TTGAAGATGATGGATAATTA+AGG | + | chr2_3:52364624-52364643 | None:intergenic | 25.0% |
| ! | AGTCAAATGAAGTCAAAAAA+TGG | + | chr2_3:52364687-52364706 | None:intergenic | 25.0% |
| !!! | TGGTTATTTGATTTTGAATG+TGG | - | chr2_3:52364755-52364774 | Msa0298390:intron | 25.0% |
| !! | GACTGTTTAGTTGATATAAT+TGG | - | chr2_3:52365041-52365060 | Msa0298390:intron | 25.0% |
| !! | GTTTAGTTGATATAATTGGT+AGG | - | chr2_3:52365045-52365064 | Msa0298390:intron | 25.0% |
| !!! | GTTTTTTGATGAGAAGTTTT+TGG | - | chr2_3:52365098-52365117 | Msa0298390:intron | 25.0% |
| ! | AGAGAAAATCTAAGCTATTA+GGG | + | chr2_3:52365137-52365156 | None:intergenic | 25.0% |
| ! | AAGAGAAAATCTAAGCTATT+AGG | + | chr2_3:52365138-52365157 | None:intergenic | 25.0% |
| ! | TCAAATAAGCCAATCTAAAT+AGG | - | chr2_3:52365408-52365427 | Msa0298390:intron | 25.0% |
| ! | CTTGACAAAATTATTTGCAT+AGG | - | chr2_3:52365648-52365667 | Msa0298390:intron | 25.0% |
| ! | TTTGTTAGTACAAGGAATAT+GGG | + | chr2_3:52365736-52365755 | None:intergenic | 25.0% |
| !! | TTTTGTTAGTACAAGGAATA+TGG | + | chr2_3:52365737-52365756 | None:intergenic | 25.0% |
| !! | AAGACATTTTTGTTAGTACA+AGG | + | chr2_3:52365744-52365763 | None:intergenic | 25.0% |
| !! | TAAGGTTTGAAGTTAACTAT+AGG | + | chr2_3:52365782-52365801 | None:intergenic | 25.0% |
| ! | GTCATTTCTATACTATTCTA+AGG | + | chr2_3:52365800-52365819 | None:intergenic | 25.0% |
| ! | CAAAATACGTTTATCATTCA+AGG | + | chr2_3:52365827-52365846 | None:intergenic | 25.0% |
| ! | ATAACGAAGATTTGTATTCT+TGG | - | chr2_3:52365860-52365879 | Msa0298390:intron | 25.0% |
| ! | TAACGAAGATTTGTATTCTT+GGG | - | chr2_3:52365861-52365880 | Msa0298390:intron | 25.0% |
| !!! | ACAATGATGGATTTAAAGTA+AGG | - | chr2_3:52365903-52365922 | Msa0298390:intron | 25.0% |
| !!! | CAATGATGGATTTAAAGTAA+GGG | - | chr2_3:52365904-52365923 | Msa0298390:intron | 25.0% |
| !! | GCCAAAATAAACTTTCTTTT+TGG | + | chr2_3:52365977-52365996 | None:intergenic | 25.0% |
| !!! | TTTAGAGTCTTGTAACTTTT+AGG | + | chr2_3:52366159-52366178 | None:intergenic | 25.0% |
| ! | TTCAAAATATCACATAATGC+AGG | + | chr2_3:52366208-52366227 | None:intergenic | 25.0% |
| !!! | TGATATTTTGAACAGATCAT+TGG | - | chr2_3:52366216-52366235 | Msa0298390:intron | 25.0% |
| ! | CTTGTTCCATAAGAATAAAA+TGG | + | chr2_3:52366655-52366674 | None:intergenic | 25.0% |
| ! | ATACCAAAAAGGCTAAAAAA+AGG | + | chr2_3:52366918-52366937 | None:intergenic | 25.0% |
| !! | TATTCATTGGCATTTTATTG+AGG | - | chr2_3:52366935-52366954 | Msa0298390:intron | 25.0% |
| !! | CTATTATCTCTTTTTATGCT+TGG | + | chr2_3:52367364-52367383 | None:intergenic | 25.0% |
| ! | AGCATAAAAAGAGATAATAG+AGG | - | chr2_3:52367364-52367383 | Msa0298390:intron | 25.0% |
| !! | TTTTTCTCTATTTTGTTGCT+TGG | + | chr2_3:52367403-52367422 | None:intergenic | 25.0% |
| ! | AACAAAATAGAGAAAAACAG+AGG | - | chr2_3:52367406-52367425 | Msa0298390:intron | 25.0% |
| !! | ATCAAATCTGTGAATCTTTT+GGG | + | chr2_3:52367592-52367611 | None:intergenic | 25.0% |
| ! | AATGTGTTTACTTCTCATAT+CGG | - | chr2_3:52367677-52367696 | Msa0298390:intron | 25.0% |
| ! | CTGAAATTCTCTTTAAATGA+TGG | - | chr2_3:52367971-52367990 | Msa0298390:intron | 25.0% |
| ! | TGTTTCTTAATTCCTTCAAA+AGG | - | chr2_3:52368224-52368243 | Msa0298390:five_prime_UTR | 25.0% |
| !!! | CAGCATATTTTGATATTTGT+CGG | + | chr2_3:52368365-52368384 | None:intergenic | 25.0% |
| ! | GACAAATATCAAAATATGCT+GGG | - | chr2_3:52368364-52368383 | Msa0298390:five_prime_UTR | 25.0% |
| ! | AAGAAGTTTGTGAAGAAAAT+GGG | - | chr2_3:52368421-52368440 | Msa0298390:five_prime_UTR | 25.0% |
| AAATTCATTATCGATCTGTG+AGG | + | chr2_3:52364543-52364562 | None:intergenic | 30.0% | |
| AATTGAAAGGAGAAGACTTA+CGG | + | chr2_3:52364589-52364608 | None:intergenic | 30.0% | |
| GAAATGAGAGTGAAATTGAA+AGG | + | chr2_3:52364602-52364621 | None:intergenic | 30.0% | |
| GGTTAAGTAATTGAAGATGA+TGG | + | chr2_3:52364634-52364653 | None:intergenic | 30.0% | |
| TCTTTGTAAGTTGTAGCTTA+TGG | - | chr2_3:52364735-52364754 | Msa0298390:intron | 30.0% | |
| !! | TTTGATTTTGAATGTGGAAC+AGG | - | chr2_3:52364761-52364780 | Msa0298390:intron | 30.0% |
| AACAAGAAAACAAGCAACAT+AGG | + | chr2_3:52364828-52364847 | None:intergenic | 30.0% | |
| TGAAGAAACTGTTAAAGAGA+AGG | - | chr2_3:52364953-52364972 | Msa0298390:intron | 30.0% | |
| !!! | AATTGGTAGGTTTAGTTTTG+CGG | - | chr2_3:52365058-52365077 | Msa0298390:intron | 30.0% |
| GAGCGTATAACAATAACAAT+AGG | + | chr2_3:52365162-52365181 | None:intergenic | 30.0% | |
| TTATTGTTATACGCTCTGTT+TGG | - | chr2_3:52365166-52365185 | Msa0298390:intron | 30.0% | |
| !! | TAAGTTTTGTGAGACTGTTA+GGG | + | chr2_3:52365373-52365392 | None:intergenic | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+AGG | + | chr2_3:52365374-52365393 | None:intergenic | 30.0% |
| GCTTATTTGAGCTTATATAC+TGG | + | chr2_3:52365398-52365417 | None:intergenic | 30.0% | |
| ACGTAGTCATACAATACATA+GGG | + | chr2_3:52365434-52365453 | None:intergenic | 30.0% | |
| TACGTAGTCATACAATACAT+AGG | + | chr2_3:52365435-52365454 | None:intergenic | 30.0% | |
| ATGTATTGTATGACTACGTA+AGG | - | chr2_3:52365435-52365454 | Msa0298390:intron | 30.0% | |
| TGTATTGTATGACTACGTAA+GGG | - | chr2_3:52365436-52365455 | Msa0298390:intron | 30.0% | |
| ATGGCAATATGACATAGTTT+GGG | - | chr2_3:52365481-52365500 | Msa0298390:intron | 30.0% | |
| ! | TTTGTCAAGCAATTGTTTTC+CGG | + | chr2_3:52365637-52365656 | None:intergenic | 30.0% |
| TTGTTAGTACAAGGAATATG+GGG | + | chr2_3:52365735-52365754 | None:intergenic | 30.0% | |
| CAAATCTTCGTTATGAAGAA+GGG | + | chr2_3:52365854-52365873 | None:intergenic | 30.0% | |
| ACAAATCTTCGTTATGAAGA+AGG | + | chr2_3:52365855-52365874 | None:intergenic | 30.0% | |
| ! | TTCTTTTTGGACTTCTTAAC+AGG | + | chr2_3:52365964-52365983 | None:intergenic | 30.0% |
| !!! | AAGAAAGTTTATTTTGGCAG+TGG | - | chr2_3:52365979-52365998 | Msa0298390:intron | 30.0% |
| !! | AGTCAATTTCTAAAGTTCCA+AGG | + | chr2_3:52366016-52366035 | None:intergenic | 30.0% |
| !! | TATTTTGAACAGATCATTGG+TGG | - | chr2_3:52366219-52366238 | Msa0298390:intron | 30.0% |
| AAAAGATCACACAAAAAGAG+AGG | + | chr2_3:52366277-52366296 | None:intergenic | 30.0% | |
| ! | TCTCTTTTTGTGTGATCTTT+TGG | - | chr2_3:52366276-52366295 | Msa0298390:intron | 30.0% |
| ! | CTCTTTTTGTGTGATCTTTT+GGG | - | chr2_3:52366277-52366296 | Msa0298390:intron | 30.0% |
| ! | TGTTTGGTATTCTCTTTTCA+AGG | - | chr2_3:52366305-52366324 | Msa0298390:intron | 30.0% |
| !!! | TTTTCAGAGCTCTAGTTTTA+GGG | + | chr2_3:52366363-52366382 | None:intergenic | 30.0% |
| TGAAATCAAGATGAGTGATT+TGG | - | chr2_3:52366430-52366449 | Msa0298390:intron | 30.0% | |
| ! | TGATTTGGAATTAACAGTGT+TGG | - | chr2_3:52366445-52366464 | Msa0298390:intron | 30.0% |
| TGGAATTTGGAAGCTATATA+TGG | - | chr2_3:52366468-52366487 | Msa0298390:intron | 30.0% | |
| ATATCAATAGAGACATACTC+CGG | - | chr2_3:52366500-52366519 | Msa0298390:intron | 30.0% | |
| ! | TTGTTGCTTATATTCGAAAC+CGG | + | chr2_3:52366522-52366541 | None:intergenic | 30.0% |
| AGCAACAAAAAAGTCATGTT+TGG | - | chr2_3:52366534-52366553 | Msa0298390:intron | 30.0% | |
| AACAAAAAAGTCATGTTTGG+TGG | - | chr2_3:52366537-52366556 | Msa0298390:intron | 30.0% | |
| ATATTACCAAAGTGTGTGAT+TGG | - | chr2_3:52366746-52366765 | Msa0298390:intron | 30.0% | |
| TATTACCAAAGTGTGTGATT+GGG | - | chr2_3:52366747-52366766 | Msa0298390:intron | 30.0% | |
| !! | TGATTGGGTTTTAATCTGAT+TGG | - | chr2_3:52366762-52366781 | Msa0298390:intron | 30.0% |
| !! | AGTTCTAAATGGCTAAGAAT+TGG | + | chr2_3:52366847-52366866 | None:intergenic | 30.0% |
| !!! | TTGCCTTTTTTTAGCCTTTT+TGG | - | chr2_3:52366912-52366931 | Msa0298390:intron | 30.0% |
| !! | TTAGCCTTTTTGGTATTCAT+TGG | - | chr2_3:52366922-52366941 | Msa0298390:intron | 30.0% |
| AATGCCAATGAATACCAAAA+AGG | + | chr2_3:52366929-52366948 | None:intergenic | 30.0% | |
| TGTTTGTTTCCTTCACATTT+CGG | - | chr2_3:52367031-52367050 | Msa0298390:intron | 30.0% | |
| TAAAATTTGCCGAAATGTGA+AGG | + | chr2_3:52367043-52367062 | None:intergenic | 30.0% | |
| !! | GGTGAGAAAATTCTAGAATT+AGG | + | chr2_3:52367118-52367137 | None:intergenic | 30.0% |
| TGAAAATACCCACTCAAAAT+GGG | + | chr2_3:52367169-52367188 | None:intergenic | 30.0% | |
| TTGAAAATACCCACTCAAAA+TGG | + | chr2_3:52367170-52367189 | None:intergenic | 30.0% | |
| TCGTGTTTACTTTCTTTAAC+CGG | + | chr2_3:52367252-52367271 | None:intergenic | 30.0% | |
| TTGATAGAGTTGAGTGAAAT+AGG | - | chr2_3:52367310-52367329 | Msa0298390:intron | 30.0% | |
| AGAAAATAGACGAAAAACAG+AGG | - | chr2_3:52367336-52367355 | Msa0298390:intron | 30.0% | |
| AGATAATAGAGGAAAAACAG+AGG | - | chr2_3:52367375-52367394 | Msa0298390:intron | 30.0% | |
| ! | CATCAAATCTGTGAATCTTT+TGG | + | chr2_3:52367593-52367612 | None:intergenic | 30.0% |
| TATTAATATGAGAAGGGCAA+TGG | + | chr2_3:52367722-52367741 | None:intergenic | 30.0% | |
| !!! | TCTGCAGATTATTTTAGTAC+AGG | - | chr2_3:52367999-52368018 | Msa0298390:intron | 30.0% |
| ! | CTTACAACAATTCCTTTTGA+AGG | + | chr2_3:52368239-52368258 | None:intergenic | 30.0% |
| CGACAAATATCAAAATATGC+TGG | - | chr2_3:52368363-52368382 | Msa0298390:five_prime_UTR | 30.0% | |
| CAAGAAGTTTGTGAAGAAAA+TGG | - | chr2_3:52368420-52368439 | Msa0298390:five_prime_UTR | 30.0% | |
| GAGGAGGAAAGATATAGAAA+CGG | + | chr2_3:52364457-52364476 | None:intergenic | 35.0% | |
| TATTAGGAGGAATCATGTCA+AGG | - | chr2_3:52364802-52364821 | Msa0298390:intron | 35.0% | |
| TACATAGGGCCTATTTAGAT+TGG | + | chr2_3:52365420-52365439 | None:intergenic | 35.0% | |
| CATGGCAATATGACATAGTT+TGG | - | chr2_3:52365480-52365499 | Msa0298390:intron | 35.0% | |
| CATAAATCTCATCTTGCACA+TGG | - | chr2_3:52365544-52365563 | Msa0298390:intron | 35.0% | |
| !!! | TATGGGGTTTTGTTGCTAAT+GGG | + | chr2_3:52365719-52365738 | None:intergenic | 35.0% |
| !!! | ATATGGGGTTTTGTTGCTAA+TGG | + | chr2_3:52365720-52365739 | None:intergenic | 35.0% |
| ! | GGTTTGAAGTTAACTATAGG+TGG | + | chr2_3:52365779-52365798 | None:intergenic | 35.0% |
| TTGTAATGCCACAAAAGTGA+AGG | + | chr2_3:52365887-52365906 | None:intergenic | 35.0% | |
| ! | CTTTTGTGGCATTACAATGA+TGG | - | chr2_3:52365890-52365909 | Msa0298390:intron | 35.0% |
| CATGCTAGCAAGTAACTTAA+GGG | + | chr2_3:52366094-52366113 | None:intergenic | 35.0% | |
| ! | CTTAAGTTACTTGCTAGCAT+GGG | - | chr2_3:52366093-52366112 | Msa0298390:intron | 35.0% |
| TATCACATAATGCAGGCTTA+GGG | + | chr2_3:52366201-52366220 | None:intergenic | 35.0% | |
| ATATCACATAATGCAGGCTT+AGG | + | chr2_3:52366202-52366221 | None:intergenic | 35.0% | |
| ! | TTTTTGTGTGATCTTTTGGG+AGG | - | chr2_3:52366280-52366299 | Msa0298390:intron | 35.0% |
| !! | TTTTGTGTGATCTTTTGGGA+GGG | - | chr2_3:52366281-52366300 | Msa0298390:intron | 35.0% |
| !!! | TTTCAGAGCTCTAGTTTTAG+GGG | + | chr2_3:52366362-52366381 | None:intergenic | 35.0% |
| !!! | GTTTTCAGAGCTCTAGTTTT+AGG | + | chr2_3:52366364-52366383 | None:intergenic | 35.0% |
| ! | TTTGGAATTAACAGTGTTGG+TGG | - | chr2_3:52366448-52366467 | Msa0298390:intron | 35.0% |
| !! | TTAACAGTGTTGGTGGAATT+TGG | - | chr2_3:52366455-52366474 | Msa0298390:intron | 35.0% |
| TTTGGAAGCTATATATGGCT+TGG | - | chr2_3:52366473-52366492 | Msa0298390:intron | 35.0% | |
| TAAAACCCAATCACACACTT+TGG | + | chr2_3:52366755-52366774 | None:intergenic | 35.0% | |
| AGAATTGGTAAGATGTGCAA+AGG | + | chr2_3:52366832-52366851 | None:intergenic | 35.0% | |
| ! | TAACTTGGAGCTTTTTGCTT+GGG | - | chr2_3:52366886-52366905 | Msa0298390:intron | 35.0% |
| ATTAGGAAATGAGAGAGAGA+TGG | + | chr2_3:52367101-52367120 | None:intergenic | 35.0% | |
| GGTTAAAGAAAGTAAACACG+AGG | - | chr2_3:52367251-52367270 | Msa0298390:intron | 35.0% | |
| ATGTTAGATCCTCAGTAGTT+AGG | + | chr2_3:52367558-52367577 | None:intergenic | 35.0% | |
| !! | AATCTGTGAATCTTTTGGGT+GGG | + | chr2_3:52367588-52367607 | None:intergenic | 35.0% |
| ! | AAATCTGTGAATCTTTTGGG+TGG | + | chr2_3:52367589-52367608 | None:intergenic | 35.0% |
| TTGTGTTTCCTTGCACAAAT+CGG | + | chr2_3:52367623-52367642 | None:intergenic | 35.0% | |
| GTTTACTTCTCATATCGGTA+AGG | - | chr2_3:52367682-52367701 | Msa0298390:intron | 35.0% | |
| ! | GAATATTACTAGTGCTACTC+TGG | + | chr2_3:52367766-52367785 | None:intergenic | 35.0% |
| GAAGACTTAATGAACTTGTG+CGG | - | chr2_3:52368034-52368053 | Msa0298390:intron | 35.0% | |
| GGAACTATAAATAGCACTGT+AGG | - | chr2_3:52368096-52368115 | Msa0298390:intron | 35.0% | |
| ! | TGAGCGACAACAAATTTTAG+AGG | - | chr2_3:52368146-52368165 | Msa0298390:intron | 35.0% |
| AGTTTGTGAAGAAAATGGGT+TGG | - | chr2_3:52368425-52368444 | Msa0298390:five_prime_UTR | 35.0% | |
| ATCGATCTGTGAGGAGTTTA+GGG | + | chr2_3:52364534-52364553 | None:intergenic | 40.0% | |
| TATCGATCTGTGAGGAGTTT+AGG | + | chr2_3:52364535-52364554 | None:intergenic | 40.0% | |
| !! | CTTACGGAAGAGTGTTATTG+AGG | + | chr2_3:52364573-52364592 | None:intergenic | 40.0% |
| TAATCACTTCGCAATTCGAG+TGG | - | chr2_3:52364859-52364878 | Msa0298390:intron | 40.0% | |
| CATTGACAAGATTGTGCACA+TGG | - | chr2_3:52365462-52365481 | Msa0298390:intron | 40.0% | |
| CAGTATAAATAACGCTCGAG+TGG | + | chr2_3:52365590-52365609 | None:intergenic | 40.0% | |
| CTTCTTAACAGGTTCCATCA+GGG | + | chr2_3:52365953-52365972 | None:intergenic | 40.0% | |
| ACTTCTTAACAGGTTCCATC+AGG | + | chr2_3:52365954-52365973 | None:intergenic | 40.0% | |
| CCATGCTAGCAAGTAACTTA+AGG | + | chr2_3:52366095-52366114 | None:intergenic | 40.0% | |
| ! | CCTTAAGTTACTTGCTAGCA+TGG | - | chr2_3:52366092-52366111 | Msa0298390:intron | 40.0% |
| ! | AAGAGAGGCAGCTTTTAATG+TGG | + | chr2_3:52366262-52366281 | None:intergenic | 40.0% |
| !! | TTTGTGTGATCTTTTGGGAG+GGG | - | chr2_3:52366282-52366301 | Msa0298390:intron | 40.0% |
| CCAGACTCATTGACAATCTT+AGG | + | chr2_3:52366395-52366414 | None:intergenic | 40.0% | |
| CCTAAGATTGTCAATGAGTC+TGG | - | chr2_3:52366392-52366411 | Msa0298390:intron | 40.0% | |
| TATGGAACAAGTTCCCATGA+TGG | - | chr2_3:52366664-52366683 | Msa0298390:intron | 40.0% | |
| ATGGAACAAGTTCCCATGAT+GGG | - | chr2_3:52366665-52366684 | Msa0298390:intron | 40.0% | |
| TTCCTCAAATTGCCCATCAT+GGG | + | chr2_3:52366680-52366699 | None:intergenic | 40.0% | |
| ATTCCTCAAATTGCCCATCA+TGG | + | chr2_3:52366681-52366700 | None:intergenic | 40.0% | |
| ! | GTAACTTGGAGCTTTTTGCT+TGG | - | chr2_3:52366885-52366904 | Msa0298390:intron | 40.0% |
| ! | AACTTGGAGCTTTTTGCTTG+GGG | - | chr2_3:52366887-52366906 | Msa0298390:intron | 40.0% |
| TGGCTGAAAATAAGAGAGAG+CGG | + | chr2_3:52367081-52367100 | None:intergenic | 40.0% | |
| TAACAGAATGGGAGAGTAGT+GGG | + | chr2_3:52367139-52367158 | None:intergenic | 40.0% | |
| ! | ACTACATTGGTTAGGAGGAT+AGG | + | chr2_3:52367198-52367217 | None:intergenic | 40.0% |
| ACGTAACACAGTTCGTAAGT+AGG | - | chr2_3:52367275-52367294 | Msa0298390:intron | 40.0% | |
| ACACAGTTCGTAAGTAGGAT+TGG | - | chr2_3:52367280-52367299 | Msa0298390:intron | 40.0% | |
| ! | AGTTCGTAAGTAGGATTGGT+AGG | - | chr2_3:52367284-52367303 | Msa0298390:intron | 40.0% |
| GAGAAAAACAGAGGAAACAG+AGG | - | chr2_3:52367415-52367434 | Msa0298390:intron | 40.0% | |
| AGGAAACTGGCAAAAAACAG+AGG | - | chr2_3:52367435-52367454 | Msa0298390:intron | 40.0% | |
| GAAACAGAGCAAAAACGAAC+CGG | - | chr2_3:52367457-52367476 | Msa0298390:intron | 40.0% | |
| !! | ATCTGTGAATCTTTTGGGTG+GGG | + | chr2_3:52367587-52367606 | None:intergenic | 40.0% |
| !! | GAATTTCACCGATTTGTGCA+AGG | - | chr2_3:52367612-52367631 | Msa0298390:intron | 40.0% |
| ATATGAGAAGGGCAATGGAT+TGG | + | chr2_3:52367717-52367736 | None:intergenic | 40.0% | |
| ! | GCTACTCTGGAAATAGAGTA+TGG | + | chr2_3:52367753-52367772 | None:intergenic | 40.0% |
| GCTTCATTAACATGCTGCAA+AGG | + | chr2_3:52368178-52368197 | None:intergenic | 40.0% | |
| AATGATAAACGCGGTGGTTG+AGG | + | chr2_3:52364421-52364440 | None:intergenic | 45.0% | |
| TGACGTGGCAATGATAAACG+CGG | + | chr2_3:52364430-52364449 | None:intergenic | 45.0% | |
| TATAGAAACGGAGAGTGACG+TGG | + | chr2_3:52364445-52364464 | None:intergenic | 45.0% | |
| GAGAAAGTAAGTTTGGGAGG+AGG | + | chr2_3:52364473-52364492 | None:intergenic | 45.0% | |
| GGTGAGAAAGTAAGTTTGGG+AGG | + | chr2_3:52364476-52364495 | None:intergenic | 45.0% | |
| GGGGGTGAGAAAGTAAGTTT+GGG | + | chr2_3:52364479-52364498 | None:intergenic | 45.0% | |
| TTCCTCAGAGTGTGAGGTTA+GGG | + | chr2_3:52364500-52364519 | None:intergenic | 45.0% | |
| TTTCCTCAGAGTGTGAGGTT+AGG | + | chr2_3:52364501-52364520 | None:intergenic | 45.0% | |
| GACTCAACATCAGACACAAG+TGG | + | chr2_3:52364891-52364910 | None:intergenic | 45.0% | |
| TTGCACATGGCTTATGTCTC+AGG | - | chr2_3:52365557-52365576 | Msa0298390:intron | 45.0% | |
| TGCACATGGCTTATGTCTCA+GGG | - | chr2_3:52365558-52365577 | Msa0298390:intron | 45.0% | |
| ACCATCAAACTCACTGCCTA+GGG | - | chr2_3:52365685-52365704 | Msa0298390:intron | 45.0% | |
| !! | CTAATGGGTTTCAGTTCCCT+AGG | + | chr2_3:52365704-52365723 | None:intergenic | 45.0% |
| !! | TTCTTGGGCCTTCACTTTTG+TGG | - | chr2_3:52365876-52365895 | Msa0298390:intron | 45.0% |
| CAGTGGTGCATTTAACACCT+TGG | - | chr2_3:52365996-52366015 | Msa0298390:intron | 45.0% | |
| TAGGACAGCGTTTGAAAGCT+TGG | + | chr2_3:52366140-52366159 | None:intergenic | 45.0% | |
| !! | TTCCCATGATGGGCAATTTG+AGG | - | chr2_3:52366675-52366694 | Msa0298390:intron | 45.0% |
| GGCTGAAAATAAGAGAGAGC+GGG | + | chr2_3:52367080-52367099 | None:intergenic | 45.0% | |
| CTAACAGAATGGGAGAGTAG+TGG | + | chr2_3:52367140-52367159 | None:intergenic | 45.0% | |
| TGGGCTGCAACTAACAGAAT+GGG | + | chr2_3:52367150-52367169 | None:intergenic | 45.0% | |
| ! | ATGGGCTGCAACTAACAGAA+TGG | + | chr2_3:52367151-52367170 | None:intergenic | 45.0% |
| ! | TAGTTGCAGCCCATTTTGAG+TGG | - | chr2_3:52367157-52367176 | Msa0298390:intron | 45.0% |
| !! | AGTTGCAGCCCATTTTGAGT+GGG | - | chr2_3:52367158-52367177 | Msa0298390:intron | 45.0% |
| TCCTCCTAACCAATGTAGTC+AGG | - | chr2_3:52367199-52367218 | Msa0298390:intron | 45.0% | |
| ! | TCCTGACTACATTGGTTAGG+AGG | + | chr2_3:52367203-52367222 | None:intergenic | 45.0% |
| ! | CGATCCTGACTACATTGGTT+AGG | + | chr2_3:52367206-52367225 | None:intergenic | 45.0% |
| GATCTCGATCCTGACTACAT+TGG | + | chr2_3:52367211-52367230 | None:intergenic | 45.0% | |
| ATCGAGATCCTACGTAGGAT+CGG | - | chr2_3:52367222-52367241 | Msa0298390:intron | 45.0% | |
| ACAGAGGAAACAGAGGAAAC+TGG | - | chr2_3:52367422-52367441 | Msa0298390:intron | 45.0% | |
| TAGTTAGGAGCAGTGTAGTC+AGG | + | chr2_3:52367543-52367562 | None:intergenic | 45.0% | |
| TACACTGCTCCTAACTACTG+AGG | - | chr2_3:52367546-52367565 | Msa0298390:intron | 45.0% | |
| !! | TCTGTGAATCTTTTGGGTGG+GGG | + | chr2_3:52367586-52367605 | None:intergenic | 45.0% |
| TCAAGAATCCGCTCAGTTAG+AGG | + | chr2_3:52368123-52368142 | None:intergenic | 45.0% | |
| !!! | AAAATAAAATCTAATTTTTA+AGG | + | chr2_3:52366625-52366644 | None:intergenic | 5.0% |
| !!! | TATTTATTTGTTATAAAATT+TGG | + | chr2_3:52367922-52367941 | None:intergenic | 5.0% |
| ! | AGCAGAGTAACGCGTTTTCG+AGG | + | chr2_3:52364348-52364367 | None:intergenic | 50.0% |
| AAAACGCGTTACTCTGCTGC+AGG | - | chr2_3:52364350-52364369 | Msa0298390:three_prime_UTR | 50.0% | |
| TTGGGAAGTGAAAGCGACGA+CGG | + | chr2_3:52364394-52364413 | None:intergenic | 50.0% | |
| ATAAACGCGGTGGTTGAGGT+CGG | + | chr2_3:52364417-52364436 | None:intergenic | 50.0% | |
| GGGGGGTGAGAAAGTAAGTT+TGG | + | chr2_3:52364480-52364499 | None:intergenic | 50.0% | |
| TCCTCAGAGTGTGAGGTTAG+GGG | + | chr2_3:52364499-52364518 | None:intergenic | 50.0% | |
| ! | ACCTCACACTCTGAGGAAAG+AGG | - | chr2_3:52364502-52364521 | Msa0298390:three_prime_UTR | 50.0% |
| ! | CCTCACACTCTGAGGAAAGA+GGG | - | chr2_3:52364503-52364522 | Msa0298390:three_prime_UTR | 50.0% |
| ! | CTCACACTCTGAGGAAAGAG+GGG | - | chr2_3:52364504-52364523 | Msa0298390:three_prime_UTR | 50.0% |
| ! | TCACACTCTGAGGAAAGAGG+GGG | - | chr2_3:52364505-52364524 | Msa0298390:three_prime_UTR | 50.0% |
| ACATGGCTTATGTCTCAGGG+TGG | - | chr2_3:52365561-52365580 | Msa0298390:intron | 50.0% | |
| CACCATCAAACTCACTGCCT+AGG | - | chr2_3:52365684-52365703 | Msa0298390:intron | 50.0% | |
| TCCCTAGGCAGTGAGTTTGA+TGG | + | chr2_3:52365689-52365708 | None:intergenic | 50.0% | |
| !!! | GATCTTTTGGGAGGGGTGTT+TGG | - | chr2_3:52366289-52366308 | Msa0298390:intron | 50.0% |
| !!! | CAGAGCTCTAGTTTTAGGGG+AGG | + | chr2_3:52366359-52366378 | None:intergenic | 50.0% |
| TCAGGATCGAGATCCTACGT+AGG | - | chr2_3:52367217-52367236 | Msa0298390:intron | 50.0% | |
| AGATCCTACGTAGGATCGGT+CGG | - | chr2_3:52367226-52367245 | Msa0298390:intron | 50.0% | |
| ACCGGAGTAAAGTCGAAGCA+CGG | - | chr2_3:52367475-52367494 | Msa0298390:intron | 50.0% | |
| ACCGTGCTTCGACTTTACTC+CGG | + | chr2_3:52367479-52367498 | None:intergenic | 50.0% | |
| !! | TGTGAATCTTTTGGGTGGGG+GGG | + | chr2_3:52367584-52367603 | None:intergenic | 50.0% |
| !! | CTGTGAATCTTTTGGGTGGG+GGG | + | chr2_3:52367585-52367604 | None:intergenic | 50.0% |
| TGAACTTGTGCGGCATCTTC+AGG | - | chr2_3:52368044-52368063 | Msa0298390:intron | 50.0% | |
| GAACAACTGCAGCAGTGCAA+AGG | - | chr2_3:52368066-52368085 | Msa0298390:intron | 50.0% | |
| CAGCAGTGCAAAGGAAGCAA+TGG | - | chr2_3:52368075-52368094 | Msa0298390:intron | 50.0% | |
| CTGTAGGTCCTCTAACTGAG+CGG | - | chr2_3:52368112-52368131 | Msa0298390:intron | 50.0% | |
| CGTGGCAATGATAAACGCGG+TGG | + | chr2_3:52364427-52364446 | None:intergenic | 55.0% | |
| CTCAGAGTGTGAGGTTAGGG+GGG | + | chr2_3:52364497-52364516 | None:intergenic | 55.0% | |
| CCTCAGAGTGTGAGGTTAGG+GGG | + | chr2_3:52364498-52364517 | None:intergenic | 55.0% | |
| CCCTCTTTCCTCAGAGTGTG+AGG | + | chr2_3:52364506-52364525 | None:intergenic | 55.0% | |
| ! | CAGGTTCCATCAGGGCACTA+GGG | + | chr2_3:52365945-52365964 | None:intergenic | 55.0% |
| ! | ACAGGTTCCATCAGGGCACT+AGG | + | chr2_3:52365946-52365965 | None:intergenic | 55.0% |
| GTAAAGTCGAAGCACGGTCG+AGG | - | chr2_3:52367481-52367500 | Msa0298390:intron | 55.0% | |
| GTGTAGTCAGGATCGAGTGC+TGG | + | chr2_3:52367531-52367550 | None:intergenic | 55.0% | |
| CCCCCTAACCTCACACTCTG+AGG | - | chr2_3:52364495-52364514 | Msa0298390:three_prime_UTR | 60.0% | |
| CAAGTGCCCTAGTGCCCTGA+TGG | - | chr2_3:52365936-52365955 | Msa0298390:intron | 60.0% | |
| CGCGGTGGTTGAGGTCGGTT+GGG | + | chr2_3:52364412-52364431 | None:intergenic | 65.0% | |
| ACGCGGTGGTTGAGGTCGGT+TGG | + | chr2_3:52364413-52364432 | None:intergenic | 65.0% | |
| CCTACGTAGGATCGGTCGGC+CGG | - | chr2_3:52367230-52367249 | Msa0298390:intron | 65.0% | |
| !! | GAAGCACGGTCGAGGTGCTG+TGG | - | chr2_3:52367489-52367508 | Msa0298390:intron | 65.0% |
| CCGGCCGACCGATCCTACGT+AGG | + | chr2_3:52367233-52367252 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 52364306 | 52368449 | 52364306 | ID=Msa0298390;Name=Msa0298390 |
| chr2_3 | mRNA | 52364306 | 52368449 | 52364306 | ID=Msa0298390-mRNA-1;Parent=Msa0298390;Name=Msa0298390-mRNA-1;_AED=0.35;_eAED=0.35;_QI=315|1|1|1|0.5|0.33|3|276|108 |
| chr2_3 | exon | 52364306 | 52364749 | 52364306 | ID=Msa0298390-mRNA-1:exon:16728;Parent=Msa0298390-mRNA-1 |
| chr2_3 | exon | 52367781 | 52367972 | 52367781 | ID=Msa0298390-mRNA-1:exon:16727;Parent=Msa0298390-mRNA-1 |
| chr2_3 | exon | 52368168 | 52368449 | 52368168 | ID=Msa0298390-mRNA-1:exon:16726;Parent=Msa0298390-mRNA-1 |
| chr2_3 | five_prime_UTR | 52368168 | 52368449 | 52368168 | ID=Msa0298390-mRNA-1:five_prime_utr;Parent=Msa0298390-mRNA-1 |
| chr2_3 | five_prime_UTR | 52367940 | 52367972 | 52367940 | ID=Msa0298390-mRNA-1:five_prime_utr;Parent=Msa0298390-mRNA-1 |
| chr2_3 | CDS | 52367781 | 52367939 | 52367781 | ID=Msa0298390-mRNA-1:cds;Parent=Msa0298390-mRNA-1 |
| chr2_3 | CDS | 52364582 | 52364749 | 52364582 | ID=Msa0298390-mRNA-1:cds;Parent=Msa0298390-mRNA-1 |
| chr2_3 | three_prime_UTR | 52364306 | 52364581 | 52364306 | ID=Msa0298390-mRNA-1:three_prime_utr;Parent=Msa0298390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
