AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0238070


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0238070 MtrunA17_Chr2g0287731 97.927 386 5 2 1 383 1 386 0.0 764
Msa0238070 MtrunA17_Chr4g0065661 72.308 260 66 3 124 382 103 357 4.45e-136 392
Msa0238070 MtrunA17_Chr1g0181351 43.949 314 136 6 66 378 68 342 2.02e-87 268
Msa0238070 MtrunA17_Chr7g0264071 46.718 259 105 4 124 382 103 328 1.07e-77 243
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0238070 AT5G19080.1 58.710 310 97 8 91 382 79 375 1.63e-117 346
Msa0238070 AT3G06140.1 53.521 355 131 8 34 382 30 356 1.42e-105 315
Msa0238070 AT3G09770.1 48.561 278 129 5 106 378 101 369 1.80e-85 265
Msa0238070 AT3G53410.1 45.804 286 140 6 98 382 26 297 1.66e-80 249
Msa0238070 AT5G03200.1 41.398 372 167 11 6 376 12 333 2.66e-74 234
Msa0238070 AT3G09770.2 45.749 247 120 5 106 347 101 338 4.71e-65 211

Find 137 sgRNAs with CRISPR-Local

Find 487 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGCCAACTCCTTTCTTAA+AGG 0.165355 2_2:-11347208 None:intergenic
CTGAAGGCTGAGCAAATTTC+TGG 0.188908 2_2:-11347227 None:intergenic
AGTGGTGGTGGTTGTGGTGG+TGG 0.206257 2_2:-11341641 None:intergenic
AGTTGGGGTGGTTGTGGAGG+TGG 0.227085 2_2:-11341760 None:intergenic
ACGGCATATAGGGCATTTAT+TGG 0.230340 2_2:-11348442 None:intergenic
GTGGCGGTGGTGGTGGAAGT+TGG 0.237047 2_2:-11341777 None:intergenic
TGGCGGTGGTGGTGGAAGTT+GGG 0.244199 2_2:-11341776 None:intergenic
TGGGGCTGTGGTTGAGGTTG+TGG 0.249348 2_2:-11341895 None:intergenic
TTGGGAGGATAGTTATTGTT+AGG 0.252982 2_2:-11341937 None:intergenic
GCAGCAGCAGGAGCGTAAAA+AGG 0.256123 2_2:-11342048 None:intergenic
GGTGGAAGTTGGGGTGGTTG+TGG 0.264630 2_2:-11341766 None:intergenic
GGTGGTGGTGGTGGAGGGTG+TGG 0.271195 2_2:-11341826 None:intergenic
CAGAAATTTGCTCAGCCTTC+AGG 0.272025 2_2:+11347228 Msa0238070:CDS
TTACAAACAAAGAATTTCTA+AGG 0.281637 2_2:-11348558 None:intergenic
GGGGCTGTGGTTGAGGTTGT+GGG 0.283354 2_2:-11341894 None:intergenic
AATACGATTGGTAGTGGAAT+TGG 0.290425 2_2:-11341956 None:intergenic
GGTGGTGGTGGCGGTGGTGG+TGG 0.305078 2_2:-11341784 None:intergenic
GATGGGAGTGGTGGTGGTTG+TGG 0.329259 2_2:-11341647 None:intergenic
GTTGGGGTGGTTGTGGAGGT+GGG 0.336750 2_2:-11341759 None:intergenic
TTCTTAAAGGGGACTTTGAC+TGG 0.344717 2_2:-11347195 None:intergenic
CAATTGGCTGACGGCATATA+GGG 0.347981 2_2:-11348452 None:intergenic
TGTTGAGGTGGTGGTGGTGG+TGG 0.354310 2_2:-11341835 None:intergenic
TCAATTGGCTGACGGCATAT+AGG 0.355159 2_2:-11348453 None:intergenic
TGGCCAACTCCTTTCTTAAA+GGG 0.357604 2_2:-11347207 None:intergenic
CTTTGTTGAGGTGGTGGTGG+TGG 0.357983 2_2:-11341838 None:intergenic
GGCGGTGGTGGTGGAAGTTG+GGG 0.358603 2_2:-11341775 None:intergenic
TAAGGTGGTGGTGGCGGTGG+TGG 0.361132 2_2:-11341787 None:intergenic
GGAAGTTGGGGTGGTTGTGG+AGG 0.362129 2_2:-11341763 None:intergenic
TTTGCTCAGCCTTCAGGAAC+AGG 0.362178 2_2:+11347234 Msa0238070:CDS
GGCTTTGATGACAGTGATCC+TGG 0.364670 2_2:+11347558 Msa0238070:CDS
ATACGATTGGTAGTGGAATT+GGG 0.369216 2_2:-11341955 None:intergenic
TCAACCTTATCACACTCAAA+TGG 0.371823 2_2:+11341693 Msa0238070:exon
GTGGTGGTGGTTGTGGTGGT+GGG 0.376307 2_2:-11341640 None:intergenic
GGTTGAGGTTGTGGGGTGTA+AGG 0.377971 2_2:-11341886 None:intergenic
AGGATAGTTATTGTTAGGGT+TGG 0.378115 2_2:-11341932 None:intergenic
TCAGCCAATTGAGGAACTTA+TGG 0.388032 2_2:+11348464 Msa0238070:CDS
TTAAGAGAACTATATGGAAT+AGG 0.390290 2_2:+11347519 Msa0238070:CDS
GCAAATTACTCAAGCTGTCT+TGG 0.394705 2_2:+11347419 Msa0238070:CDS
AAACAATGTTAATGTTCATA+AGG 0.399525 2_2:+11342122 Msa0238070:CDS
TTGAGGAACTTATGGAGATC+AGG 0.413330 2_2:+11348472 Msa0238070:CDS
GGTAAGACAGCTGTATCCTT+TGG 0.424454 2_2:-11347609 None:intergenic
AAAGAAACAAGGTAATGATC+AGG 0.424687 2_2:-11342177 None:intergenic
GCAGTTTGATGATCAACATA+AGG 0.425772 2_2:-11342087 None:intergenic
TATGAGTTAAGAGAACTATA+TGG 0.428547 2_2:+11347513 Msa0238070:CDS
AATGAATGGGGCTGTGGTTG+AGG 0.432432 2_2:-11341901 None:intergenic
TGGGAGGATAGTTATTGTTA+GGG 0.438633 2_2:-11341936 None:intergenic
CGAAGGAAGAAGATAAATGT+AGG 0.439842 2_2:+11347142 Msa0238070:CDS
TGTCTTACCTTGTCGACATA+TGG 0.443782 2_2:+11347623 Msa0238070:CDS
AATATGCGCTGAAACATGTT+TGG 0.444189 2_2:+11347329 Msa0238070:CDS
TAGTAAGGTGGTGGTGGCGG+TGG 0.449369 2_2:-11341790 None:intergenic
GGGAGTGGTGGTGGTTGTGG+TGG 0.449443 2_2:-11341644 None:intergenic
ATCTCCATAAGTTCCTCAAT+TGG 0.455073 2_2:-11348468 None:intergenic
TAACTTTGTTGAGGTGGTGG+TGG 0.459142 2_2:-11341841 None:intergenic
CAACCTTATCACACTCAAAT+GGG 0.468509 2_2:+11341694 Msa0238070:exon
AGACAGATTCTGTGGATTGA+TGG 0.470345 2_2:+11347483 Msa0238070:CDS
GGGGTGTAAGGAGTAGTTGA+GGG 0.474874 2_2:-11341874 None:intergenic
GCATCTAGCACGGAATCATC+AGG 0.477136 2_2:-11347384 None:intergenic
GGTGGTGGTGGAAGTTGGGG+TGG 0.486672 2_2:-11341772 None:intergenic
GGTTGGAGAAGTAGAATGAA+TGG 0.487810 2_2:-11341915 None:intergenic
ATACCCATTTGAGTGTGATA+AGG 0.490658 2_2:-11341697 None:intergenic
GATCTTTCAAAGCCTTCACC+TGG 0.493980 2_2:+11347285 Msa0238070:CDS
GTTGGAGAAGTAGAATGAAT+GGG 0.498547 2_2:-11341914 None:intergenic
CATATTACACACTCCTTCCC+AGG 0.500384 2_2:-11347576 None:intergenic
TAGTAGTAACTTTGTTGAGG+TGG 0.501465 2_2:-11341847 None:intergenic
TAATAGTAAGGTGGTGGTGG+CGG 0.503251 2_2:-11341793 None:intergenic
TAGTAACTTTGTTGAGGTGG+TGG 0.505643 2_2:-11341844 None:intergenic
GGGTGTAAGGAGTAGTTGAG+GGG 0.509446 2_2:-11341873 None:intergenic
GTCCCCTTTAAGAAAGGAGT+TGG 0.514493 2_2:+11347204 Msa0238070:CDS
GTCAAAGTCCCCTTTAAGAA+AGG 0.515621 2_2:+11347198 Msa0238070:CDS
TTGACTGGCACAAATGCATC+AGG 0.516809 2_2:-11347180 None:intergenic
CATCTAACTCAAAGAAGCCT+AGG 0.517494 2_2:-11347263 None:intergenic
ATATTGAATACGATTGGTAG+TGG 0.522257 2_2:-11341962 None:intergenic
TCATGCAATTCAACTTAACA+TGG 0.528197 2_2:-11348531 None:intergenic
GGTTCTGTTGAGTAATAGTA+AGG 0.528574 2_2:-11341805 None:intergenic
GGGCTGTGGTTGAGGTTGTG+GGG 0.529194 2_2:-11341893 None:intergenic
CTTGAGTAATTTGCATGTGA+GGG 0.532696 2_2:-11347410 None:intergenic
TGGGGTGTAAGGAGTAGTTG+AGG 0.536360 2_2:-11341875 None:intergenic
TCGATGCCGTCTTTGATGGA+AGG 0.538621 2_2:+11342205 Msa0238070:CDS
GGAGTGGAAGAAGCAGCAGC+AGG 0.541795 2_2:-11342060 None:intergenic
GGTGTAAGGAGTAGTTGAGG+GGG 0.542550 2_2:-11341872 None:intergenic
ATAGGAAGCTCAGAAGCTGC+AGG 0.551666 2_2:+11347537 Msa0238070:CDS
AGGTCAATCCCTGTTCCTGA+AGG 0.552318 2_2:-11347243 None:intergenic
AAACGGTGCAAATAACAAGA+TGG 0.554009 2_2:-11341665 None:intergenic
TGTTGATTGAGATGATATGA+AGG 0.555406 2_2:-11341988 None:intergenic
TGGTGGTGGGTGAGAAATCA+CGG 0.557116 2_2:-11341627 None:intergenic
AAGTAGAATGAATGGGGCTG+TGG 0.560453 2_2:-11341907 None:intergenic
AACAACAACCGCAATATGCA+TGG 0.563639 2_2:+11342010 Msa0238070:CDS
TGAGGAACTTATGGAGATCA+GGG 0.564292 2_2:+11348473 Msa0238070:CDS
ATCTTTCAAAGCCTTCACCT+GGG 0.564713 2_2:+11347286 Msa0238070:CDS
GGCCAACTCCTTTCTTAAAG+GGG 0.565364 2_2:-11347206 None:intergenic
AACGGTGCAAATAACAAGAT+GGG 0.566574 2_2:-11341664 None:intergenic
AGGATGATATTGAATACGAT+TGG 0.567391 2_2:-11341968 None:intergenic
GCTTGAGTAATTTGCATGTG+AGG 0.568254 2_2:-11347411 None:intergenic
AACATGTTTGGAAACTCCCT+CGG 0.570776 2_2:+11347341 Msa0238070:CDS
TATATGCCGTCAGCCAATTG+AGG 0.570906 2_2:+11348455 Msa0238070:CDS
TAACAAGATGGGAGTGGTGG+TGG 0.576356 2_2:-11341653 None:intergenic
AAGACATCTTCCCCAGGTGA+AGG 0.578612 2_2:-11347297 None:intergenic
TTGCTCAGCCTTCAGGAACA+GGG 0.578956 2_2:+11347235 Msa0238070:CDS
TGATAAGGTTGAAGAAGAAA+CGG 0.579846 2_2:-11341682 None:intergenic
GTGTAAGGAGTAGTTGAGGG+GGG 0.580892 2_2:-11341871 None:intergenic
GTTTCAGCGCATATTACAAG+AGG 0.581361 2_2:-11347321 None:intergenic
GTTGAGTAATAGTAAGGTGG+TGG 0.583381 2_2:-11341799 None:intergenic
GACTTACCTTCCATCAAAGA+CGG 0.589000 2_2:-11342211 None:intergenic
GCTTTGATGACAGTGATCCT+GGG 0.589338 2_2:+11347559 Msa0238070:CDS
GAGTAATAGTAAGGTGGTGG+TGG 0.595861 2_2:-11341796 None:intergenic
TCAGGAACAGGGATTGACCT+AGG 0.597428 2_2:+11347246 Msa0238070:CDS
TGCAAATAACAAGATGGGAG+TGG 0.598240 2_2:-11341659 None:intergenic
AAGAAACAAGGTAATGATCA+GGG 0.599115 2_2:-11342176 None:intergenic
TGATGATCAACATAAGGAGG+TGG 0.603587 2_2:-11342081 None:intergenic
AAGTAGTTAGACAGATTCTG+TGG 0.607111 2_2:+11347475 Msa0238070:CDS
GGATAGTAGTAACTTTGTTG+AGG 0.607650 2_2:-11341850 None:intergenic
TAAGTTCCTCAATTGGCTGA+CGG 0.613922 2_2:-11348461 None:intergenic
GCTGTCTTGGAGAAAAGTAA+TGG 0.618568 2_2:+11347432 Msa0238070:CDS
GGTTAAGCTGATCAATCTCA+AGG 0.622530 2_2:-11342155 None:intergenic
TGATGACAGTGATCCTGGGA+AGG 0.623579 2_2:+11347563 Msa0238070:CDS
GTGAGGGGATGCATCTAGCA+CGG 0.624270 2_2:-11347394 None:intergenic
ATCAACATAAGGAGGTGGAG+TGG 0.626424 2_2:-11342076 None:intergenic
TCTGTTGAGTAATAGTAAGG+TGG 0.627423 2_2:-11341802 None:intergenic
TCTTTCAAAGCCTTCACCTG+GGG 0.628972 2_2:+11347287 Msa0238070:CDS
ACAAATGCATCAGGAAAGAG+TGG 0.630441 2_2:-11347171 None:intergenic
TTGGAGAAGTAGAATGAATG+GGG 0.634290 2_2:-11341913 None:intergenic
GGTGGAGGCCATGCATATTG+CGG 0.636895 2_2:-11342018 None:intergenic
AGAGGAAAGACATCTTCCCC+AGG 0.641748 2_2:-11347303 None:intergenic
CATGCAATTCAACTTAACAT+GGG 0.644199 2_2:-11348530 None:intergenic
AATATGCATGACTGAACCAA+AGG 0.650537 2_2:+11347593 Msa0238070:CDS
CATCGAAAACAAAAGAAACA+AGG 0.651934 2_2:-11342188 None:intergenic
ACACTCAAATGGGTATTACG+TGG 0.668710 2_2:+11341704 Msa0238070:exon
AATCTTACCATATGTCGACA+AGG 0.677295 2_2:-11347630 None:intergenic
ATGCAATTCAACTTAACATG+GGG 0.677496 2_2:-11348529 None:intergenic
TTGGAGAAAAGTAATGGTGG+TGG 0.678741 2_2:+11347438 Msa0238070:CDS
GTTTGATGATCAACATAAGG+AGG 0.683417 2_2:-11342084 None:intergenic
TTGAGTAATTTGCATGTGAG+GGG 0.691901 2_2:-11347409 None:intergenic
AAATAACAAGATGGGAGTGG+TGG 0.701409 2_2:-11341656 None:intergenic
GTCTTGGAGAAAAGTAATGG+TGG 0.719546 2_2:+11347435 Msa0238070:CDS
CGATTGGTAGTGGAATTGGG+AGG 0.739216 2_2:-11341952 None:intergenic
GTGAGTGTGCAAAAGCTCTG+CGG 0.761192 2_2:+11348412 Msa0238070:CDS
TGGTGGGTGAGAAATCACGG+CGG 0.845233 2_2:-11341624 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATATTTATAATTATTT+TGG + chr2_2:11346374-11346393 Msa0238070:intron 0.0%
!!! ATATATAATTCATAAACTTT+TGG - chr2_2:11342898-11342917 None:intergenic 10.0%
!! AGAAATTACATAAAAAAAAA+GGG + chr2_2:11343391-11343410 Msa0238070:intron 10.0%
!!! TGAATTTATATTATTAGTTT+TGG + chr2_2:11346433-11346452 Msa0238070:intron 10.0%
!!! TTTCAAGTTAAAATTAATTC+TGG - chr2_2:11342611-11342630 None:intergenic 15.0%
!!! ATTAATTTTAACTTGAAACT+AGG + chr2_2:11342613-11342632 Msa0238070:intron 15.0%
!! GAGAAATTACATAAAAAAAA+AGG + chr2_2:11343390-11343409 Msa0238070:intron 15.0%
!!! GAATTTTAAAAACTTAGTTA+TGG - chr2_2:11343641-11343660 None:intergenic 15.0%
!!! AAGTTTTTAAAATTCTTATC+TGG + chr2_2:11343646-11343665 Msa0238070:intron 15.0%
!! ACAATTTCATTAATATACTA+TGG - chr2_2:11344757-11344776 None:intergenic 15.0%
!! ATATAAAATAGTATCTTAGT+AGG - chr2_2:11345203-11345222 None:intergenic 15.0%
!!! ATGTTTCTTGTAATTTTTAA+AGG - chr2_2:11345834-11345853 None:intergenic 15.0%
!! TATTATATATACAAAATGCA+CGG + chr2_2:11346287-11346306 Msa0238070:intron 15.0%
!! AATGAAATGTTATATATGTA+TGG + chr2_2:11346718-11346737 Msa0238070:intron 15.0%
!!! ATATTACTAAAAGTGTAAAA+TGG + chr2_2:11348038-11348057 Msa0238070:intron 15.0%
!! TTTCTTTCTCATAGAAAAAA+AGG + chr2_2:11341581-11341600 Msa0238070:five_prime_UTR 20.0%
!! TTCTTTCTCATAGAAAAAAA+GGG + chr2_2:11341582-11341601 Msa0238070:five_prime_UTR 20.0%
!! AAACAATGTTAATGTTCATA+AGG + chr2_2:11342122-11342141 Msa0238070:CDS 20.0%
!! AATTTATAGTGGTTTATGTT+TGG - chr2_2:11342706-11342725 None:intergenic 20.0%
!! CAAAAACATAAAAAAGAAGA+AGG + chr2_2:11343043-11343062 Msa0238070:intron 20.0%
!!! AAGTTAGTACATTTTTCTTA+CGG - chr2_2:11343092-11343111 None:intergenic 20.0%
!! GTTTCTATATATACTAGATT+AGG - chr2_2:11343152-11343171 None:intergenic 20.0%
!! CATATAGTCATATATTATGT+AGG + chr2_2:11343604-11343623 Msa0238070:intron 20.0%
!! AAATTACAAAACAATTCACA+TGG - chr2_2:11343769-11343788 None:intergenic 20.0%
!! GTAATGTTTGTTTATGAAAA+TGG - chr2_2:11344348-11344367 None:intergenic 20.0%
!! TTTCATTAATATACTATGGT+CGG - chr2_2:11344753-11344772 None:intergenic 20.0%
!! TTAGATTCTAATCTTATGAA+TGG - chr2_2:11344898-11344917 None:intergenic 20.0%
!!! TTTTTTTAAGAGACTTAAAG+TGG + chr2_2:11345309-11345328 Msa0238070:intron 20.0%
!!! TCTATGAACTCATTATTTTA+AGG - chr2_2:11346249-11346268 None:intergenic 20.0%
!! GTTTCAAGAATATGAAAAAA+CGG + chr2_2:11346659-11346678 Msa0238070:intron 20.0%
!! ACATTATTAAATTGCCAATA+TGG - chr2_2:11346791-11346810 None:intergenic 20.0%
!! GGATAAGTATAATTGTATAA+TGG + chr2_2:11347048-11347067 Msa0238070:intron 20.0%
!! ATGAAGAAAACAAAAATTGA+AGG - chr2_2:11348093-11348112 None:intergenic 20.0%
!!! ACATGTATTGTTTAAAATCA+TGG + chr2_2:11348176-11348195 Msa0238070:intron 20.0%
!!! CATGTATTGTTTAAAATCAT+GGG + chr2_2:11348177-11348196 Msa0238070:intron 20.0%
!! TTACAAACAAAGAATTTCTA+AGG - chr2_2:11348561-11348580 None:intergenic 20.0%
! CTTGTTTGTTTATGTATGTT+TGG + chr2_2:11342264-11342283 Msa0238070:intron 25.0%
! TAGTAGAATTAGTGTATGTT+TGG + chr2_2:11342326-11342345 Msa0238070:intron 25.0%
! TCTGATTAAAAGTGAATTGA+AGG + chr2_2:11342386-11342405 Msa0238070:intron 25.0%
! TAAAAGTGAATTGAAGGTAA+AGG + chr2_2:11342392-11342411 Msa0238070:intron 25.0%
! AAAAGTGAATTGAAGGTAAA+GGG + chr2_2:11342393-11342412 Msa0238070:intron 25.0%
!!! TACAAATTTTAGCTTCAAGT+AGG + chr2_2:11342490-11342509 Msa0238070:intron 25.0%
! TAAAATTAATTCTGGACACA+TGG - chr2_2:11342603-11342622 None:intergenic 25.0%
!! AAAGTGAGTTGAATTTATAG+TGG - chr2_2:11342717-11342736 None:intergenic 25.0%
! ATCAGAGTTGTTAACTAATT+TGG + chr2_2:11342933-11342952 Msa0238070:intron 25.0%
! TAATAACATCATGTTTACGT+TGG - chr2_2:11343124-11343143 None:intergenic 25.0%
! TCTAGTATATATAGAAACCT+TGG + chr2_2:11343154-11343173 Msa0238070:intron 25.0%
! CTAGTATATATAGAAACCTT+GGG + chr2_2:11343155-11343174 Msa0238070:intron 25.0%
! TAGTATATATAGAAACCTTG+GGG + chr2_2:11343156-11343175 Msa0238070:intron 25.0%
!! TCTAATTGATTCAAAACTCT+TGG + chr2_2:11343246-11343265 Msa0238070:intron 25.0%
! AAAACTCTTGGAAATTGTTT+AGG + chr2_2:11343258-11343277 Msa0238070:intron 25.0%
! TATGTAATTTCTCAACTAGA+GGG - chr2_2:11343588-11343607 None:intergenic 25.0%
! ATATGTAATTTCTCAACTAG+AGG - chr2_2:11343589-11343608 None:intergenic 25.0%
! CACATGGTTACATAATATAT+GGG - chr2_2:11343753-11343772 None:intergenic 25.0%
! TCACATGGTTACATAATATA+TGG - chr2_2:11343754-11343773 None:intergenic 25.0%
! TCAAATATCTCTGTCATTAT+AGG + chr2_2:11343824-11343843 Msa0238070:intron 25.0%
! CAAATATCTCTGTCATTATA+GGG + chr2_2:11343825-11343844 Msa0238070:intron 25.0%
! AAGATGAATGAGTATATTGT+AGG - chr2_2:11344118-11344137 None:intergenic 25.0%
!! AGTTAAAATGATTTTCAGAG+TGG + chr2_2:11344672-11344691 Msa0238070:intron 25.0%
!! GTTAAAATGATTTTCAGAGT+GGG + chr2_2:11344673-11344692 Msa0238070:intron 25.0%
!! TTAAAATGATTTTCAGAGTG+GGG + chr2_2:11344674-11344693 Msa0238070:intron 25.0%
!! TTGTACTTCTTTGATACTTT+TGG + chr2_2:11344968-11344987 Msa0238070:intron 25.0%
!!! GCTGATATTTTAAGGAAAAA+AGG + chr2_2:11345113-11345132 Msa0238070:intron 25.0%
!! CACTAAAATCTAAAATAACG+AGG - chr2_2:11345475-11345494 None:intergenic 25.0%
!!! TTTAGATTTTAGTGAAAGTG+TGG + chr2_2:11345481-11345500 Msa0238070:intron 25.0%
! ATTACAAGAAACATGTTTGA+TGG + chr2_2:11345840-11345859 Msa0238070:intron 25.0%
! ACGTAAAGGTAATATTTACA+TGG - chr2_2:11346052-11346071 None:intergenic 25.0%
!! TTATTTTCCAAATTTAGCGA+GGG - chr2_2:11346127-11346146 None:intergenic 25.0%
!!! TTTATTTTCCAAATTTAGCG+AGG - chr2_2:11346128-11346147 None:intergenic 25.0%
! ATGAGTTCATAGATAATAGA+AGG + chr2_2:11346256-11346275 Msa0238070:intron 25.0%
! TGAGTTCATAGATAATAGAA+GGG + chr2_2:11346257-11346276 Msa0238070:intron 25.0%
!!! CAAGAAATTTTAAGTAGTGT+AGG - chr2_2:11346744-11346763 None:intergenic 25.0%
!! TTCTATTTTGTTCTTCTGTT+AGG - chr2_2:11346938-11346957 None:intergenic 25.0%
! TATACTTATCCATCTTCAAA+CGG - chr2_2:11347039-11347058 None:intergenic 25.0%
! TATGAGTTAAGAGAACTATA+TGG + chr2_2:11347513-11347532 Msa0238070:CDS 25.0%
! TTAAGAGAACTATATGGAAT+AGG + chr2_2:11347519-11347538 Msa0238070:CDS 25.0%
! AGTAATATTAGCAATGACAT+TGG - chr2_2:11348026-11348045 None:intergenic 25.0%
!! TACTAAAAGTGTAAAATGGA+TGG + chr2_2:11348042-11348061 Msa0238070:intron 25.0%
! ATAAATTAAGATTATACCGC+AGG - chr2_2:11348118-11348137 None:intergenic 25.0%
!!! TCTTAATTTATTTTCAGCGA+TGG + chr2_2:11348127-11348146 Msa0238070:intron 25.0%
!!! CTTAATTTATTTTCAGCGAT+GGG + chr2_2:11348128-11348147 Msa0238070:intron 25.0%
! TCACAATAGGAAATGAAATA+TGG - chr2_2:11348350-11348369 None:intergenic 25.0%
! AATATGAGAATAGTCACAAT+AGG - chr2_2:11348363-11348382 None:intergenic 25.0%
TGATAAGGTTGAAGAAGAAA+CGG - chr2_2:11341685-11341704 None:intergenic 30.0%
ATATTGAATACGATTGGTAG+TGG - chr2_2:11341965-11341984 None:intergenic 30.0%
AGGATGATATTGAATACGAT+TGG - chr2_2:11341971-11341990 None:intergenic 30.0%
! TGTTGATTGAGATGATATGA+AGG - chr2_2:11341991-11342010 None:intergenic 30.0%
AAGAAACAAGGTAATGATCA+GGG - chr2_2:11342179-11342198 None:intergenic 30.0%
AAAGAAACAAGGTAATGATC+AGG - chr2_2:11342180-11342199 None:intergenic 30.0%
CATCGAAAACAAAAGAAACA+AGG - chr2_2:11342191-11342210 None:intergenic 30.0%
AAGGTAAAGGGATTTATGTA+TGG + chr2_2:11342405-11342424 Msa0238070:intron 30.0%
GATCTTGAGTTAATTTCTTG+AGG + chr2_2:11342870-11342889 Msa0238070:intron 30.0%
AGAGTTGTTAACTAATTTGG+TGG + chr2_2:11342936-11342955 Msa0238070:intron 30.0%
! ATTTTGCTTGATTGCATAGT+AGG + chr2_2:11342962-11342981 Msa0238070:intron 30.0%
! TTTTGCTTGATTGCATAGTA+GGG + chr2_2:11342963-11342982 Msa0238070:intron 30.0%
! TTAGTACATTTTTCTTACGG+AGG - chr2_2:11343089-11343108 None:intergenic 30.0%
AGTATATATAGAAACCTTGG+GGG + chr2_2:11343157-11343176 Msa0238070:intron 30.0%
TTGATACTACTTAGAAACAG+TGG - chr2_2:11343217-11343236 None:intergenic 30.0%
AATTGTTTAGGTAATCTGCA+AGG + chr2_2:11343270-11343289 Msa0238070:intron 30.0%
ATTGTTTAGGTAATCTGCAA+GGG + chr2_2:11343271-11343290 Msa0238070:intron 30.0%
TGGATAAGATGTTATGAACT+AGG + chr2_2:11343321-11343340 Msa0238070:intron 30.0%
GGATAAGATGTTATGAACTA+GGG + chr2_2:11343322-11343341 Msa0238070:intron 30.0%
ATGTAATTTCTCAACTAGAG+GGG - chr2_2:11343587-11343606 None:intergenic 30.0%
TACATCCTCTTTAACATGTT+AGG + chr2_2:11343789-11343808 Msa0238070:intron 30.0%
AACAACCTAACATGTTAAAG+AGG - chr2_2:11343797-11343816 None:intergenic 30.0%
ATCGAAGTCATTCTGAATTT+AGG - chr2_2:11343865-11343884 None:intergenic 30.0%
TTCATGATAGTTTCTCCAAT+AGG + chr2_2:11344014-11344033 Msa0238070:intron 30.0%
TATAGAAAGGAGAATACATC+AGG - chr2_2:11344081-11344100 None:intergenic 30.0%
GTCTGAAAATACTAGGTTAT+AGG - chr2_2:11344191-11344210 None:intergenic 30.0%
! CACTTGATTTTCTCTCATAT+TGG + chr2_2:11344239-11344258 Msa0238070:intron 30.0%
TTTGTCTCATACAACATTGT+TGG + chr2_2:11344280-11344299 Msa0238070:intron 30.0%
AAACACACACACAAAAGAAA+GGG - chr2_2:11344371-11344390 None:intergenic 30.0%
TAAACACACACACAAAAGAA+AGG - chr2_2:11344372-11344391 None:intergenic 30.0%
AACACTTCAAAATTGATGAG+AGG + chr2_2:11344472-11344491 Msa0238070:intron 30.0%
!!! TCTATTTTAACACTGGAAAG+GGG - chr2_2:11344648-11344667 None:intergenic 30.0%
!!! CTCTATTTTAACACTGGAAA+GGG - chr2_2:11344649-11344668 None:intergenic 30.0%
!!! TCTCTATTTTAACACTGGAA+AGG - chr2_2:11344650-11344669 None:intergenic 30.0%
!!! ACTACTCTCTATTTTAACAC+TGG - chr2_2:11344655-11344674 None:intergenic 30.0%
GATTCTAATCTTATGAATGG+TGG - chr2_2:11344895-11344914 None:intergenic 30.0%
TAGACACAGAAGACAAAATA+TGG - chr2_2:11344926-11344945 None:intergenic 30.0%
!! GTTGTTGTGCTGATATTTTA+AGG + chr2_2:11345105-11345124 Msa0238070:intron 30.0%
!! TTTTAAGGAAAAAAGGTAGC+AGG + chr2_2:11345120-11345139 Msa0238070:intron 30.0%
CAGGATAGAAGATAAAATCA+TGG + chr2_2:11345139-11345158 Msa0238070:intron 30.0%
!! TAATTCAAGTTGAGAGTCAA+AGG - chr2_2:11345278-11345297 None:intergenic 30.0%
ACTCTCAACTTGAATTAAAG+TGG + chr2_2:11345281-11345300 Msa0238070:intron 30.0%
! GACTTAAAGTGGTTAGTTAA+TGG + chr2_2:11345320-11345339 Msa0238070:intron 30.0%
!!! TCTACAGTCACTTTTGAATT+AGG + chr2_2:11345438-11345457 Msa0238070:intron 30.0%
AGAACTTCTAACTTGAATGA+AGG + chr2_2:11345585-11345604 Msa0238070:intron 30.0%
GTTGCTATGGTTTCAATATA+TGG + chr2_2:11345607-11345626 Msa0238070:intron 30.0%
ACTGAATCAAGAATAACAAG+TGG - chr2_2:11345650-11345669 None:intergenic 30.0%
! CTCTTGATTTTGAACCATAT+TGG + chr2_2:11345673-11345692 Msa0238070:intron 30.0%
CATGTTTATAATGCATGTGA+TGG - chr2_2:11345787-11345806 None:intergenic 30.0%
CATCACATGCATTATAAACA+TGG + chr2_2:11345785-11345804 Msa0238070:intron 30.0%
GTCGAAATTATCTTCTTGTT+AGG + chr2_2:11345922-11345941 Msa0238070:intron 30.0%
GTATGCATCATTCATTGTAA+AGG + chr2_2:11346809-11346828 Msa0238070:intron 30.0%
AACTAATTTGAGAGATCATG+CGG - chr2_2:11346864-11346883 None:intergenic 30.0%
!!! AATTAGTTTTACCTGTGTTC+TGG + chr2_2:11346876-11346895 Msa0238070:intron 30.0%
CAAAATAGAACCACAGTTTA+TGG + chr2_2:11346948-11346967 Msa0238070:intron 30.0%
! GAAGTTGCAATTAGTTTGAT+TGG + chr2_2:11346974-11346993 Msa0238070:intron 30.0%
!! TCTGTCTAACTACTTTTATC+TGG - chr2_2:11347470-11347489 None:intergenic 30.0%
! CCTGGAATAAATGCATTTTA+CGG + chr2_2:11347697-11347716 Msa0238070:intron 30.0%
! ATAAATGCATTTTACGGTCT+TGG + chr2_2:11347703-11347722 Msa0238070:intron 30.0%
TATCAACTATATGTAACGCA+AGG - chr2_2:11348304-11348323 None:intergenic 30.0%
ATGCAATTCAACTTAACATG+GGG - chr2_2:11348532-11348551 None:intergenic 30.0%
CATGCAATTCAACTTAACAT+GGG - chr2_2:11348533-11348552 None:intergenic 30.0%
TCATGCAATTCAACTTAACA+TGG - chr2_2:11348534-11348553 None:intergenic 30.0%
AACGGTGCAAATAACAAGAT+GGG - chr2_2:11341667-11341686 None:intergenic 35.0%
AAACGGTGCAAATAACAAGA+TGG - chr2_2:11341668-11341687 None:intergenic 35.0%
TCAACCTTATCACACTCAAA+TGG + chr2_2:11341693-11341712 Msa0238070:exon 35.0%
CAACCTTATCACACTCAAAT+GGG + chr2_2:11341694-11341713 Msa0238070:exon 35.0%
ATACCCATTTGAGTGTGATA+AGG - chr2_2:11341700-11341719 None:intergenic 35.0%
TCTGTTGAGTAATAGTAAGG+TGG - chr2_2:11341805-11341824 None:intergenic 35.0%
GGTTCTGTTGAGTAATAGTA+AGG - chr2_2:11341808-11341827 None:intergenic 35.0%
TAGTAGTAACTTTGTTGAGG+TGG - chr2_2:11341850-11341869 None:intergenic 35.0%
GGATAGTAGTAACTTTGTTG+AGG - chr2_2:11341853-11341872 None:intergenic 35.0%
TTGGAGAAGTAGAATGAATG+GGG - chr2_2:11341916-11341935 None:intergenic 35.0%
GTTGGAGAAGTAGAATGAAT+GGG - chr2_2:11341917-11341936 None:intergenic 35.0%
AGGATAGTTATTGTTAGGGT+TGG - chr2_2:11341935-11341954 None:intergenic 35.0%
TGGGAGGATAGTTATTGTTA+GGG - chr2_2:11341939-11341958 None:intergenic 35.0%
TTGGGAGGATAGTTATTGTT+AGG - chr2_2:11341940-11341959 None:intergenic 35.0%
!! ATACGATTGGTAGTGGAATT+GGG - chr2_2:11341958-11341977 None:intergenic 35.0%
!! AATACGATTGGTAGTGGAAT+TGG - chr2_2:11341959-11341978 None:intergenic 35.0%
! GTTTGATGATCAACATAAGG+AGG - chr2_2:11342087-11342106 None:intergenic 35.0%
! GCAGTTTGATGATCAACATA+AGG - chr2_2:11342090-11342109 None:intergenic 35.0%
TTAGTGTATGTTTGGATCTG+CGG + chr2_2:11342334-11342353 Msa0238070:intron 35.0%
GTAATCAATTATACACCTGC+CGG + chr2_2:11342545-11342564 Msa0238070:intron 35.0%
! ATTGACATGTTTCTAAGCAG+TGG + chr2_2:11342845-11342864 Msa0238070:intron 35.0%
TTTGCTTGATTGCATAGTAG+GGG + chr2_2:11342964-11342983 Msa0238070:intron 35.0%
TGCAAAAAAAGTTTCTCGCA+GGG - chr2_2:11343004-11343023 None:intergenic 35.0%
ATACTACTTAGAAACAGTGG+CGG - chr2_2:11343214-11343233 None:intergenic 35.0%
AGTGTGTAGCTTAGTGTTAT+AGG + chr2_2:11343294-11343313 Msa0238070:intron 35.0%
AGCTTAGTGTTATAGGATAC+TGG + chr2_2:11343301-11343320 Msa0238070:intron 35.0%
CATAAAAAAAAAGGGCAACC+CGG + chr2_2:11343399-11343418 Msa0238070:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG - chr2_2:11343546-11343565 None:intergenic 35.0%
TGGAATGTATTGTAATGCAC+AGG + chr2_2:11343697-11343716 Msa0238070:intron 35.0%
GGAATGTATTGTAATGCACA+GGG + chr2_2:11343698-11343717 Msa0238070:intron 35.0%
GAATGTATTGTAATGCACAG+GGG + chr2_2:11343699-11343718 Msa0238070:intron 35.0%
AACTATCATGAAAGACCTAG+AGG - chr2_2:11344006-11344025 None:intergenic 35.0%
AGTTTCTCCAATAGGTTTCT+TGG + chr2_2:11344022-11344041 Msa0238070:intron 35.0%
AGGAAAACCAAGAAACCTAT+TGG - chr2_2:11344032-11344051 None:intergenic 35.0%
ATAGTCATTGCTATAGGCAA+AGG - chr2_2:11344052-11344071 None:intergenic 35.0%
TCTCCTTTCTATAGAATCCA+TGG + chr2_2:11344088-11344107 Msa0238070:intron 35.0%
CTCCTTTCTATAGAATCCAT+GGG + chr2_2:11344089-11344108 Msa0238070:intron 35.0%
ATAGTGTTAAGAGAGAGTTG+GGG - chr2_2:11344158-11344177 None:intergenic 35.0%
GATAGTGTTAAGAGAGAGTT+GGG - chr2_2:11344159-11344178 None:intergenic 35.0%
! TGATAGTGTTAAGAGAGAGT+TGG - chr2_2:11344160-11344179 None:intergenic 35.0%
GTATGAGACAAATTGTTGTG+TGG - chr2_2:11344272-11344291 None:intergenic 35.0%
AACACACACACAAAAGAAAG+GGG - chr2_2:11344370-11344389 None:intergenic 35.0%
ATGCATTATGCAGAACAAAC+AGG + chr2_2:11344408-11344427 Msa0238070:intron 35.0%
ATTATGCAGAACAAACAGGA+AGG + chr2_2:11344412-11344431 Msa0238070:intron 35.0%
TTCGTGTGTTAAGAAATGTG+AGG + chr2_2:11344602-11344621 Msa0238070:intron 35.0%
! CAGGGAACTTTTGAATTACA+TGG - chr2_2:11344799-11344818 None:intergenic 35.0%
TAGAGATCTCAGGTATTAAG+TGG - chr2_2:11344845-11344864 None:intergenic 35.0%
! TCTAGAGCAACTTGCATAAT+AGG + chr2_2:11344861-11344880 Msa0238070:intron 35.0%
AGCATAAGAGTAAATGTGGT+CGG - chr2_2:11345037-11345056 None:intergenic 35.0%
! CAGAAGCATAAGAGTAAATG+TGG - chr2_2:11345041-11345060 None:intergenic 35.0%
CTGCAAATGTGATATTCTCT+CGG + chr2_2:11345058-11345077 Msa0238070:intron 35.0%
! TAAAGTGGTTAGTTAATGGC+AGG + chr2_2:11345324-11345343 Msa0238070:intron 35.0%
! AAAGTGGTTAGTTAATGGCA+GGG + chr2_2:11345325-11345344 Msa0238070:intron 35.0%
GAGTTTGAAAGTTCCTTAGT+AGG + chr2_2:11345522-11345541 Msa0238070:intron 35.0%
ATATCACGAAACTCCTACTA+AGG - chr2_2:11345538-11345557 None:intergenic 35.0%
AACTTGAATGAAGGTTGCTA+TGG + chr2_2:11345594-11345613 Msa0238070:intron 35.0%
GACTTATGAGTCTACCAATA+TGG - chr2_2:11345690-11345709 None:intergenic 35.0%
!!! CATGGTTTTATTCTTGTGAG+AGG + chr2_2:11345803-11345822 Msa0238070:intron 35.0%
TCCACTGCTGTTAGAATTAT+TGG + chr2_2:11345977-11345996 Msa0238070:intron 35.0%
ACCAATAATTCTAACAGCAG+TGG - chr2_2:11345981-11346000 None:intergenic 35.0%
AAAACTAGTACCCATTGTGT+TGG + chr2_2:11346152-11346171 Msa0238070:intron 35.0%
TATCTTACCACCAACACAAT+GGG - chr2_2:11346165-11346184 None:intergenic 35.0%
GGTTAAAAAGTTAGAGAGTC+TGG - chr2_2:11346228-11346247 None:intergenic 35.0%
CATATGTGAAATCACAAGAG+AGG + chr2_2:11346553-11346572 Msa0238070:intron 35.0%
TATGGCTACATTTAGACGTA+TGG - chr2_2:11346773-11346792 None:intergenic 35.0%
ACGTCTAAATGTAGCCATAT+TGG + chr2_2:11346774-11346793 Msa0238070:intron 35.0%
CAACTTCAATCCATAAACTG+TGG - chr2_2:11346961-11346980 None:intergenic 35.0%
AAAATGAGACCGTTTGAAGA+TGG + chr2_2:11347027-11347046 Msa0238070:intron 35.0%
! TACTGTCTTTTACTTTGCGA+AGG + chr2_2:11347125-11347144 Msa0238070:CDS 35.0%
CGAAGGAAGAAGATAAATGT+AGG + chr2_2:11347142-11347161 Msa0238070:CDS 35.0%
AATATGCGCTGAAACATGTT+TGG + chr2_2:11347329-11347348 Msa0238070:CDS 35.0%
! TTGAGTAATTTGCATGTGAG+GGG - chr2_2:11347412-11347431 None:intergenic 35.0%
! CTTGAGTAATTTGCATGTGA+GGG - chr2_2:11347413-11347432 None:intergenic 35.0%
AAGTAGTTAGACAGATTCTG+TGG + chr2_2:11347475-11347494 Msa0238070:CDS 35.0%
AATATGCATGACTGAACCAA+AGG + chr2_2:11347593-11347612 Msa0238070:CDS 35.0%
AATCTTACCATATGTCGACA+AGG - chr2_2:11347633-11347652 None:intergenic 35.0%
CTACGTACACATATATAGAG+TGG + chr2_2:11347663-11347682 Msa0238070:intron 35.0%
AGAGTGGATAATCAATTACC+TGG + chr2_2:11347679-11347698 Msa0238070:intron 35.0%
CCGTAAAATGCATTTATTCC+AGG - chr2_2:11347700-11347719 None:intergenic 35.0%
TGTTATAGCAGAGCAGAATT+TGG + chr2_2:11347813-11347832 Msa0238070:intron 35.0%
TTAGTGTTGTCATTCGCATA+TGG - chr2_2:11347944-11347963 None:intergenic 35.0%
!! TTTGTTTTCTTCATCTCCTG+CGG + chr2_2:11348099-11348118 Msa0238070:intron 35.0%
ATCTCCATAAGTTCCTCAAT+TGG - chr2_2:11348471-11348490 None:intergenic 35.0%
AAATAACAAGATGGGAGTGG+TGG - chr2_2:11341659-11341678 None:intergenic 40.0%
TGCAAATAACAAGATGGGAG+TGG - chr2_2:11341662-11341681 None:intergenic 40.0%
ACACTCAAATGGGTATTACG+TGG + chr2_2:11341704-11341723 Msa0238070:exon 40.0%
GTTGAGTAATAGTAAGGTGG+TGG - chr2_2:11341802-11341821 None:intergenic 40.0%
TAGTAACTTTGTTGAGGTGG+TGG - chr2_2:11341847-11341866 None:intergenic 40.0%
GGTTGGAGAAGTAGAATGAA+TGG - chr2_2:11341918-11341937 None:intergenic 40.0%
AACAACAACCGCAATATGCA+TGG + chr2_2:11342010-11342029 Msa0238070:CDS 40.0%
TGATGATCAACATAAGGAGG+TGG - chr2_2:11342084-11342103 None:intergenic 40.0%
GGTTAAGCTGATCAATCTCA+AGG - chr2_2:11342158-11342177 None:intergenic 40.0%
GACTTACCTTCCATCAAAGA+CGG - chr2_2:11342214-11342233 None:intergenic 40.0%
! ATGTTTGGTTTCCCTTCTAG+TGG - chr2_2:11342577-11342596 None:intergenic 40.0%
TTGTAACCCTTGTCATGTGA+TGG + chr2_2:11342816-11342835 Msa0238070:intron 40.0%
TCTTCTCCATCACATGACAA+GGG - chr2_2:11342825-11342844 None:intergenic 40.0%
TTCTTCTCCATCACATGACA+AGG - chr2_2:11342826-11342845 None:intergenic 40.0%
TTGCTTGATTGCATAGTAGG+GGG + chr2_2:11342965-11342984 Msa0238070:intron 40.0%
GTGCAAAAAAAGTTTCTCGC+AGG - chr2_2:11343005-11343024 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - chr2_2:11343465-11343484 None:intergenic 40.0%
CTTGTGTAAAAAGCAGGGTA+AGG - chr2_2:11343491-11343510 None:intergenic 40.0%
!!! TACCCTGCTTTTTACACAAG+AGG + chr2_2:11343491-11343510 Msa0238070:intron 40.0%
AGCCTCTTGTGTAAAAAGCA+GGG - chr2_2:11343496-11343515 None:intergenic 40.0%
!!! CAACTTTTGTACTGGTTCAG+TGG - chr2_2:11343674-11343693 None:intergenic 40.0%
CACTGAACCAGTACAAAAGT+TGG + chr2_2:11343672-11343691 Msa0238070:intron 40.0%
!! AACCAGTACAAAAGTTGGTG+TGG + chr2_2:11343677-11343696 Msa0238070:intron 40.0%
! TTCCACACCAACTTTTGTAC+TGG - chr2_2:11343682-11343701 None:intergenic 40.0%
!! TAGACAAGCCTTATTCCACT+AGG + chr2_2:11343910-11343929 Msa0238070:intron 40.0%
TATCCAAACCATTGACCTCT+AGG + chr2_2:11343988-11344007 Msa0238070:intron 40.0%
ATGAAAGACCTAGAGGTCAA+TGG - chr2_2:11343999-11344018 None:intergenic 40.0%
TCGAGGATAGTCATTGCTAT+AGG - chr2_2:11344058-11344077 None:intergenic 40.0%
GACCCATGGATTCTATAGAA+AGG - chr2_2:11344094-11344113 None:intergenic 40.0%
AGTATATTGTAGGAGACCCA+TGG - chr2_2:11344108-11344127 None:intergenic 40.0%
GCAGGATGTCTGAAAATACT+AGG - chr2_2:11344198-11344217 None:intergenic 40.0%
TGATCGTCTCTTAAGGTTAG+TGG - chr2_2:11344512-11344531 None:intergenic 40.0%
!! ATGGCTTTGATCGTCTCTTA+AGG - chr2_2:11344519-11344538 None:intergenic 40.0%
ATCATCCTATTGTCAGAGGA+GGG - chr2_2:11345355-11345374 None:intergenic 40.0%
AGACACAACTGTCTATCAGT+TGG - chr2_2:11345722-11345741 None:intergenic 40.0%
! AATGCATGTGATGGAAAAGC+CGG - chr2_2:11345778-11345797 None:intergenic 40.0%
TTTAGACGTCAGCAACGTAA+AGG - chr2_2:11346066-11346085 None:intergenic 40.0%
CTATCTTACCACCAACACAA+TGG - chr2_2:11346166-11346185 None:intergenic 40.0%
GAAATCACAAGAGAGGTGAA+TGG + chr2_2:11346560-11346579 Msa0238070:intron 40.0%
GAGAGGTGAATGGTAAAATG+AGG + chr2_2:11346570-11346589 Msa0238070:intron 40.0%
GCTACATTTAGACGTATGGA+TGG - chr2_2:11346769-11346788 None:intergenic 40.0%
ACAAATGCATCAGGAAAGAG+TGG - chr2_2:11347174-11347193 None:intergenic 40.0%
TTCTTAAAGGGGACTTTGAC+TGG - chr2_2:11347198-11347217 None:intergenic 40.0%
! GTCAAAGTCCCCTTTAAGAA+AGG + chr2_2:11347198-11347217 Msa0238070:CDS 40.0%
TGGCCAACTCCTTTCTTAAA+GGG - chr2_2:11347210-11347229 None:intergenic 40.0%
CATCTAACTCAAAGAAGCCT+AGG - chr2_2:11347266-11347285 None:intergenic 40.0%
ATCTTTCAAAGCCTTCACCT+GGG + chr2_2:11347286-11347305 Msa0238070:CDS 40.0%
GTTTCAGCGCATATTACAAG+AGG - chr2_2:11347324-11347343 None:intergenic 40.0%
AACATGTTTGGAAACTCCCT+CGG + chr2_2:11347341-11347360 Msa0238070:CDS 40.0%
! TTAGGAGTTTCGTTTTCCGA+GGG - chr2_2:11347360-11347379 None:intergenic 40.0%
! TTTAGGAGTTTCGTTTTCCG+AGG - chr2_2:11347361-11347380 None:intergenic 40.0%
! ACGGAATCATCAGGAGTTTT+AGG - chr2_2:11347378-11347397 None:intergenic 40.0%
! GCTTGAGTAATTTGCATGTG+AGG - chr2_2:11347414-11347433 None:intergenic 40.0%
GCAAATTACTCAAGCTGTCT+TGG + chr2_2:11347419-11347438 Msa0238070:CDS 40.0%
GCTGTCTTGGAGAAAAGTAA+TGG + chr2_2:11347432-11347451 Msa0238070:CDS 40.0%
GTCTTGGAGAAAAGTAATGG+TGG + chr2_2:11347435-11347454 Msa0238070:CDS 40.0%
TTGGAGAAAAGTAATGGTGG+TGG + chr2_2:11347438-11347457 Msa0238070:CDS 40.0%
! AGACAGATTCTGTGGATTGA+TGG + chr2_2:11347483-11347502 Msa0238070:CDS 40.0%
TGTCTTACCTTGTCGACATA+TGG + chr2_2:11347623-11347642 Msa0238070:CDS 40.0%
CTGATGTAGCATCAGTTGTA+TGG + chr2_2:11347980-11347999 Msa0238070:intron 40.0%
TGTAGCATCAGTTGTATGGA+TGG + chr2_2:11347984-11348003 Msa0238070:intron 40.0%
GTAGCATCAGTTGTATGGAT+GGG + chr2_2:11347985-11348004 Msa0238070:intron 40.0%
ATGTCAGAACTTATAGACCG+TGG + chr2_2:11348212-11348231 Msa0238070:intron 40.0%
ACTTATAGACCGTGGAAAAG+TGG + chr2_2:11348220-11348239 Msa0238070:intron 40.0%
!! GACACTTAACCACTTTTCCA+CGG - chr2_2:11348232-11348251 None:intergenic 40.0%
! AGTGTCACTCTATATTCCAC+TGG + chr2_2:11348246-11348265 Msa0238070:intron 40.0%
! ACGGCATATAGGGCATTTAT+TGG - chr2_2:11348445-11348464 None:intergenic 40.0%
TAAGTTCCTCAATTGGCTGA+CGG - chr2_2:11348464-11348483 None:intergenic 40.0%
TCAGCCAATTGAGGAACTTA+TGG + chr2_2:11348464-11348483 Msa0238070:CDS 40.0%
TTGAGGAACTTATGGAGATC+AGG + chr2_2:11348472-11348491 Msa0238070:CDS 40.0%
TGAGGAACTTATGGAGATCA+GGG + chr2_2:11348473-11348492 Msa0238070:CDS 40.0%
!! TAATAGTAAGGTGGTGGTGG+CGG - chr2_2:11341796-11341815 None:intergenic 45.0%
! GAGTAATAGTAAGGTGGTGG+TGG - chr2_2:11341799-11341818 None:intergenic 45.0%
! TAACTTTGTTGAGGTGGTGG+TGG - chr2_2:11341844-11341863 None:intergenic 45.0%
AAGTAGAATGAATGGGGCTG+TGG - chr2_2:11341910-11341929 None:intergenic 45.0%
ATCAACATAAGGAGGTGGAG+TGG - chr2_2:11342079-11342098 None:intergenic 45.0%
! GTTTTCGATGCCGTCTTTGA+TGG + chr2_2:11342201-11342220 Msa0238070:CDS 45.0%
GTAGGATCAGTTCTACTCGA+AGG + chr2_2:11342508-11342527 Msa0238070:intron 45.0%
! GACATGTTTCTAAGCAGTGG+CGG + chr2_2:11342848-11342867 Msa0238070:intron 45.0%
TCATGTTTACGTTGGTGCAG+TGG - chr2_2:11343116-11343135 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - chr2_2:11343466-11343485 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr2_2:11343469-11343488 None:intergenic 45.0%
CAGCCTCTTGTGTAAAAAGC+AGG - chr2_2:11343497-11343516 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr2_2:11343502-11343521 Msa0238070:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG - chr2_2:11343542-11343561 None:intergenic 45.0%
TGTATTGTAATGCACAGGGG+TGG + chr2_2:11343702-11343721 Msa0238070:intron 45.0%
GTATTGTAATGCACAGGGGT+GGG + chr2_2:11343703-11343722 Msa0238070:intron 45.0%
TATTGTAATGCACAGGGGTG+GGG + chr2_2:11343704-11343723 Msa0238070:intron 45.0%
!! CAAGCCTTATTCCACTAGGT+CGG + chr2_2:11343914-11343933 Msa0238070:intron 45.0%
TTGACCGACCTAGTGGAATA+AGG - chr2_2:11343921-11343940 None:intergenic 45.0%
AGACCTAGAGGTCAATGGTT+TGG - chr2_2:11343994-11344013 None:intergenic 45.0%
AAGGAGAATACATCAGGTCG+AGG - chr2_2:11344075-11344094 None:intergenic 45.0%
CAGTGATGAAAATGCTACGC+AGG - chr2_2:11344216-11344235 None:intergenic 45.0%
TGGCTGTACATTTGGTACCT+CGG - chr2_2:11344557-11344576 None:intergenic 45.0%
!! TTTTACCCAAACCTGACTCG+TGG - chr2_2:11344577-11344596 None:intergenic 45.0%
! TTAACACTGGAAAGGGGTGT+CGG - chr2_2:11344642-11344661 None:intergenic 45.0%
TCAGAGTGGGGATTATAAGC+AGG + chr2_2:11344686-11344705 Msa0238070:intron 45.0%
CAGAGTGGGGATTATAAGCA+GGG + chr2_2:11344687-11344706 Msa0238070:intron 45.0%
AAGCAGGGAAACACATGATC+TGG + chr2_2:11344702-11344721 Msa0238070:intron 45.0%
AGCAGGGAAACACATGATCT+GGG + chr2_2:11344703-11344722 Msa0238070:intron 45.0%
! GGAAACACATGATCTGGGAT+TGG + chr2_2:11344708-11344727 Msa0238070:intron 45.0%
CAAAAGTTCCCTGCTGATGA+TGG + chr2_2:11344806-11344825 Msa0238070:intron 45.0%
AAAACCCTCCATCATCAGCA+GGG - chr2_2:11344817-11344836 None:intergenic 45.0%
TAAAACCCTCCATCATCAGC+AGG - chr2_2:11344818-11344837 None:intergenic 45.0%
!! CAAGTTGCTCTAGAGATCTC+AGG - chr2_2:11344855-11344874 None:intergenic 45.0%
GATCATCCTATTGTCAGAGG+AGG - chr2_2:11345356-11345375 None:intergenic 45.0%
CTGGATCATCCTATTGTCAG+AGG - chr2_2:11345359-11345378 None:intergenic 45.0%
ACCCCTCTAACATATCCGTA+AGG + chr2_2:11345379-11345398 Msa0238070:intron 45.0%
CCCTTACGGATATGTTAGAG+GGG - chr2_2:11345383-11345402 None:intergenic 45.0%
CCCCTCTAACATATCCGTAA+GGG + chr2_2:11345380-11345399 Msa0238070:intron 45.0%
CCCCTTACGGATATGTTAGA+GGG - chr2_2:11345384-11345403 None:intergenic 45.0%
CCCTCTAACATATCCGTAAG+GGG + chr2_2:11345381-11345400 Msa0238070:intron 45.0%
!! TGGACTCTGAGATAACTCGT+TGG + chr2_2:11345860-11345879 Msa0238070:intron 45.0%
TACGTTGCTGACGTCTAAAC+AGG + chr2_2:11346067-11346086 Msa0238070:intron 45.0%
ACTAGTACCCATTGTGTTGG+TGG + chr2_2:11346155-11346174 Msa0238070:intron 45.0%
ACTTCTCATAGCCAGAACAC+AGG - chr2_2:11346890-11346909 None:intergenic 45.0%
TTGACTGGCACAAATGCATC+AGG - chr2_2:11347183-11347202 None:intergenic 45.0%
! GTCCCCTTTAAGAAAGGAGT+TGG + chr2_2:11347204-11347223 Msa0238070:CDS 45.0%
GGCCAACTCCTTTCTTAAAG+GGG - chr2_2:11347209-11347228 None:intergenic 45.0%
CTGGCCAACTCCTTTCTTAA+AGG - chr2_2:11347211-11347230 None:intergenic 45.0%
CTGAAGGCTGAGCAAATTTC+TGG - chr2_2:11347230-11347249 None:intergenic 45.0%
! CAGAAATTTGCTCAGCCTTC+AGG + chr2_2:11347228-11347247 Msa0238070:CDS 45.0%
GATCTTTCAAAGCCTTCACC+TGG + chr2_2:11347285-11347304 Msa0238070:CDS 45.0%
TCTTTCAAAGCCTTCACCTG+GGG + chr2_2:11347287-11347306 Msa0238070:CDS 45.0%
! GCTTTGATGACAGTGATCCT+GGG + chr2_2:11347559-11347578 Msa0238070:CDS 45.0%
CATATTACACACTCCTTCCC+AGG - chr2_2:11347579-11347598 None:intergenic 45.0%
GGTAAGACAGCTGTATCCTT+TGG - chr2_2:11347612-11347631 None:intergenic 45.0%
! CTCTATATTCCACTGGCTAG+TGG + chr2_2:11348253-11348272 Msa0238070:intron 45.0%
CAATTGGCTGACGGCATATA+GGG - chr2_2:11348455-11348474 None:intergenic 45.0%
TCAATTGGCTGACGGCATAT+AGG - chr2_2:11348456-11348475 None:intergenic 45.0%
TATATGCCGTCAGCCAATTG+AGG + chr2_2:11348455-11348474 Msa0238070:CDS 45.0%
GGGGAGAGAAAAAACTGTCA+TGG - chr2_2:11348513-11348532 None:intergenic 45.0%
!! AAATATAATAATATTCATTA+TGG + chr2_2:11347749-11347768 Msa0238070:intron 5.0%
!! TGGTGGTGGGTGAGAAATCA+CGG - chr2_2:11341630-11341649 None:intergenic 50.0%
TAACAAGATGGGAGTGGTGG+TGG - chr2_2:11341656-11341675 None:intergenic 50.0%
GTGTAAGGAGTAGTTGAGGG+GGG - chr2_2:11341874-11341893 None:intergenic 50.0%
GGTGTAAGGAGTAGTTGAGG+GGG - chr2_2:11341875-11341894 None:intergenic 50.0%
GGGTGTAAGGAGTAGTTGAG+GGG - chr2_2:11341876-11341895 None:intergenic 50.0%
GGGGTGTAAGGAGTAGTTGA+GGG - chr2_2:11341877-11341896 None:intergenic 50.0%
TGGGGTGTAAGGAGTAGTTG+AGG - chr2_2:11341878-11341897 None:intergenic 50.0%
AATGAATGGGGCTGTGGTTG+AGG - chr2_2:11341904-11341923 None:intergenic 50.0%
!! CGATTGGTAGTGGAATTGGG+AGG - chr2_2:11341955-11341974 None:intergenic 50.0%
! AGCAGCAGGAGCGTAAAAAG+GGG - chr2_2:11342049-11342068 None:intergenic 50.0%
! CAGCAGCAGGAGCGTAAAAA+GGG - chr2_2:11342050-11342069 None:intergenic 50.0%
TCGATGCCGTCTTTGATGGA+AGG + chr2_2:11342205-11342224 Msa0238070:CDS 50.0%
CTGGACACATGGTGCATGTT+TGG - chr2_2:11342592-11342611 None:intergenic 50.0%
!! ATAGAAACCTTGGGGGTACC+AGG + chr2_2:11343164-11343183 Msa0238070:intron 50.0%
!! TAGAAACCTTGGGGGTACCA+GGG + chr2_2:11343165-11343184 Msa0238070:intron 50.0%
!! AACAGTGGCGGATCTTCCTT+GGG - chr2_2:11343202-11343221 None:intergenic 50.0%
!! AAACAGTGGCGGATCTTCCT+TGG - chr2_2:11343203-11343222 None:intergenic 50.0%
TCATGTGACTGGAAGGTCAC+GGG - chr2_2:11343535-11343554 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG - chr2_2:11343536-11343555 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr2_2:11343558-11343577 Msa0238070:intron 50.0%
CTCAACTAGAGGGGTAACCT+TGG - chr2_2:11343578-11343597 None:intergenic 50.0%
CATGTAGTTGACCGACCTAG+TGG - chr2_2:11343928-11343947 None:intergenic 50.0%
CACTAGGTCGGTCAACTACA+TGG + chr2_2:11343926-11343945 Msa0238070:intron 50.0%
TCGGAGAACGACTTTGGACA+TGG - chr2_2:11344538-11344557 None:intergenic 50.0%
ATGTCCAAAGTCGTTCTCCG+AGG + chr2_2:11344537-11344556 Msa0238070:intron 50.0%
! CTGACTCGTGGCTGTACATT+TGG - chr2_2:11344565-11344584 None:intergenic 50.0%
CAAATGTACAGCCACGAGTC+AGG + chr2_2:11344563-11344582 Msa0238070:intron 50.0%
TACAGCCACGAGTCAGGTTT+GGG + chr2_2:11344569-11344588 Msa0238070:intron 50.0%
! ACACATGATCTGGGATTGGC+TGG + chr2_2:11344712-11344731 Msa0238070:intron 50.0%
!! AAGTTCCCTGCTGATGATGG+AGG + chr2_2:11344809-11344828 Msa0238070:intron 50.0%
!! AGTTCCCTGCTGATGATGGA+GGG + chr2_2:11344810-11344829 Msa0238070:intron 50.0%
GACTTCCCTCCTCTGACAAT+AGG + chr2_2:11345347-11345366 Msa0238070:intron 50.0%
ACGGATATGTTAGAGGGGTC+TGG - chr2_2:11345378-11345397 None:intergenic 50.0%
GCCCCTTACGGATATGTTAG+AGG - chr2_2:11345385-11345404 None:intergenic 50.0%
AACATATCCGTAAGGGGCTG+AGG + chr2_2:11345387-11345406 Msa0238070:intron 50.0%
CTTGCACCTAGAAGCTTCTC+CGG + chr2_2:11345756-11345775 Msa0238070:intron 50.0%
GAAAAGCCGGAGAAGCTTCT+AGG - chr2_2:11345765-11345784 None:intergenic 50.0%
TGCTGACGTCTAAACAGGCA+CGG + chr2_2:11346072-11346091 Msa0238070:intron 50.0%
ACCCAGGTAGAGCTTTCTGT+GGG + chr2_2:11346095-11346114 Msa0238070:intron 50.0%
ACAAAATGCACGGCAGAGAG+AGG + chr2_2:11346297-11346316 Msa0238070:intron 50.0%
CAAAATGCACGGCAGAGAGA+GGG + chr2_2:11346298-11346317 Msa0238070:intron 50.0%
AAAATGCACGGCAGAGAGAG+GGG + chr2_2:11346299-11346318 Msa0238070:intron 50.0%
TTTGCTCAGCCTTCAGGAAC+AGG + chr2_2:11347234-11347253 Msa0238070:CDS 50.0%
TTGCTCAGCCTTCAGGAACA+GGG + chr2_2:11347235-11347254 Msa0238070:CDS 50.0%
AGGTCAATCCCTGTTCCTGA+AGG - chr2_2:11347246-11347265 None:intergenic 50.0%
TCAGGAACAGGGATTGACCT+AGG + chr2_2:11347246-11347265 Msa0238070:CDS 50.0%
AAGACATCTTCCCCAGGTGA+AGG - chr2_2:11347300-11347319 None:intergenic 50.0%
AGAGGAAAGACATCTTCCCC+AGG - chr2_2:11347306-11347325 None:intergenic 50.0%
GCATCTAGCACGGAATCATC+AGG - chr2_2:11347387-11347406 None:intergenic 50.0%
ATAGGAAGCTCAGAAGCTGC+AGG + chr2_2:11347537-11347556 Msa0238070:CDS 50.0%
! GGCTTTGATGACAGTGATCC+TGG + chr2_2:11347558-11347577 Msa0238070:CDS 50.0%
TGATGACAGTGATCCTGGGA+AGG + chr2_2:11347563-11347582 Msa0238070:CDS 50.0%
TAGTATTCGCCACTAGCCAG+TGG - chr2_2:11348265-11348284 None:intergenic 50.0%
GTGAGTGTGCAAAAGCTCTG+CGG + chr2_2:11348412-11348431 Msa0238070:CDS 50.0%
! TGGTGGGTGAGAAATCACGG+CGG - chr2_2:11341627-11341646 None:intergenic 55.0%
!! CTTTGTTGAGGTGGTGGTGG+TGG - chr2_2:11341841-11341860 None:intergenic 55.0%
GGTTGAGGTTGTGGGGTGTA+AGG - chr2_2:11341889-11341908 None:intergenic 55.0%
GGTGGAGGCCATGCATATTG+CGG - chr2_2:11342021-11342040 None:intergenic 55.0%
TAAAAAGGGGGAGGAGGTGG+AGG - chr2_2:11342036-11342055 None:intergenic 55.0%
! GCAGCAGGAGCGTAAAAAGG+GGG - chr2_2:11342048-11342067 None:intergenic 55.0%
! GCAGCAGCAGGAGCGTAAAA+AGG - chr2_2:11342051-11342070 None:intergenic 55.0%
! TCCCTTCTAGTGGTGCTAGC+CGG - chr2_2:11342567-11342586 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - chr2_2:11343421-11343440 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG + chr2_2:11343425-11343444 Msa0238070:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG + chr2_2:11343426-11343445 Msa0238070:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr2_2:11343523-11343542 None:intergenic 55.0%
GGTACCTCGGAGAACGACTT+TGG - chr2_2:11344544-11344563 None:intergenic 55.0%
GTACAGCCACGAGTCAGGTT+TGG + chr2_2:11344568-11344587 Msa0238070:intron 55.0%
AACAGCACCTCAGCCCCTTA+CGG - chr2_2:11345397-11345416 None:intergenic 55.0%
CGGAGAAGCTTCTAGGTGCA+AGG - chr2_2:11345758-11345777 None:intergenic 55.0%
GACCCAGGTAGAGCTTTCTG+TGG + chr2_2:11346094-11346113 Msa0238070:intron 55.0%
GCCCACAGAAAGCTCTACCT+GGG - chr2_2:11346099-11346118 None:intergenic 55.0%
GTAGAGCTTTCTGTGGGCCT+GGG + chr2_2:11346101-11346120 Msa0238070:intron 55.0%
TCCAAATTTAGCGAGGGCCC+AGG - chr2_2:11346121-11346140 None:intergenic 55.0%
GTGAGGGGATGCATCTAGCA+CGG - chr2_2:11347397-11347416 None:intergenic 55.0%
!! GTGGTGGTGGTTGTGGTGGT+GGG - chr2_2:11341643-11341662 None:intergenic 60.0%
!! AGTGGTGGTGGTTGTGGTGG+TGG - chr2_2:11341644-11341663 None:intergenic 60.0%
!! GATGGGAGTGGTGGTGGTTG+TGG - chr2_2:11341650-11341669 None:intergenic 60.0%
GTTGGGGTGGTTGTGGAGGT+GGG - chr2_2:11341762-11341781 None:intergenic 60.0%
AGTTGGGGTGGTTGTGGAGG+TGG - chr2_2:11341763-11341782 None:intergenic 60.0%
GGAAGTTGGGGTGGTTGTGG+AGG - chr2_2:11341766-11341785 None:intergenic 60.0%
GGTGGAAGTTGGGGTGGTTG+TGG - chr2_2:11341769-11341788 None:intergenic 60.0%
!! TGGCGGTGGTGGTGGAAGTT+GGG - chr2_2:11341779-11341798 None:intergenic 60.0%
!! TAGTAAGGTGGTGGTGGCGG+TGG - chr2_2:11341793-11341812 None:intergenic 60.0%
!! TGTTGAGGTGGTGGTGGTGG+TGG - chr2_2:11341838-11341857 None:intergenic 60.0%
GGGCTGTGGTTGAGGTTGTG+GGG - chr2_2:11341896-11341915 None:intergenic 60.0%
GGGGCTGTGGTTGAGGTTGT+GGG - chr2_2:11341897-11341916 None:intergenic 60.0%
TGGGGCTGTGGTTGAGGTTG+TGG - chr2_2:11341898-11341917 None:intergenic 60.0%
GCGTAAAAAGGGGGAGGAGG+TGG - chr2_2:11342039-11342058 None:intergenic 60.0%
GGAGCGTAAAAAGGGGGAGG+AGG - chr2_2:11342042-11342061 None:intergenic 60.0%
! GCAGGAGCGTAAAAAGGGGG+AGG - chr2_2:11342045-11342064 None:intergenic 60.0%
GGAGTGGAAGAAGCAGCAGC+AGG - chr2_2:11342063-11342082 None:intergenic 60.0%
! TTCTAGTGGTGCTAGCCGGC+AGG - chr2_2:11342563-11342582 None:intergenic 60.0%
! TGCCGGCTAGCACCACTAGA+AGG + chr2_2:11342562-11342581 Msa0238070:intron 60.0%
GCCGGCTAGCACCACTAGAA+GGG + chr2_2:11342563-11342582 Msa0238070:intron 60.0%
CGGATCTTCCTTGGGACCCA+TGG - chr2_2:11343194-11343213 None:intergenic 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - chr2_2:11343420-11343439 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr2_2:11343453-11343472 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr2_2:11343569-11343588 None:intergenic 60.0%
GTCTAAACAGGCACGGACCC+AGG + chr2_2:11346079-11346098 Msa0238070:intron 60.0%
GGCCCACAGAAAGCTCTACC+TGG - chr2_2:11346100-11346119 None:intergenic 60.0%
GGTAGAGCTTTCTGTGGGCC+TGG + chr2_2:11346100-11346119 Msa0238070:intron 60.0%
GCCTGGGCCCTCGCTAAATT+TGG + chr2_2:11346117-11346136 Msa0238070:intron 60.0%
!! GGGAGTGGTGGTGGTTGTGG+TGG - chr2_2:11341647-11341666 None:intergenic 65.0%
!! GGTGGTGGTGGAAGTTGGGG+TGG - chr2_2:11341775-11341794 None:intergenic 65.0%
!! GGCGGTGGTGGTGGAAGTTG+GGG - chr2_2:11341778-11341797 None:intergenic 65.0%
!! GTGGCGGTGGTGGTGGAAGT+TGG - chr2_2:11341780-11341799 None:intergenic 65.0%
!! TAAGGTGGTGGTGGCGGTGG+TGG - chr2_2:11341790-11341809 None:intergenic 65.0%
!! GAGGTGGTGGTGGTGGTGGA+GGG - chr2_2:11341834-11341853 None:intergenic 65.0%
!! TGAGGTGGTGGTGGTGGTGG+AGG - chr2_2:11341835-11341854 None:intergenic 65.0%
TGGAAGCCCTGGTACCCCCA+AGG - chr2_2:11343174-11343193 None:intergenic 65.0%
!! TGGGGGTACCAGGGCTTCCA+TGG + chr2_2:11343174-11343193 Msa0238070:intron 65.0%
!! GGGGGTACCAGGGCTTCCAT+GGG + chr2_2:11343175-11343194 Msa0238070:intron 65.0%
CTTGGGACCCATGGAAGCCC+TGG - chr2_2:11343185-11343204 None:intergenic 65.0%
CAGGGCTTCCATGGGTCCCA+AGG + chr2_2:11343183-11343202 Msa0238070:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG - chr2_2:11343437-11343456 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG - chr2_2:11343438-11343457 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + chr2_2:11343437-11343456 Msa0238070:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr2_2:11343438-11343457 Msa0238070:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr2_2:11343451-11343470 Msa0238070:intron 65.0%
!! GGTGGTGGTGGTGGAGGGTG+TGG - chr2_2:11341829-11341848 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + chr2_2:11343431-11343450 Msa0238070:intron 70.0%
CTCCCGCATACGCAGGGTCC+GGG + chr2_2:11343432-11343451 Msa0238070:intron 70.0%
CGCATACGCAGGGTCCGGGA+AGG + chr2_2:11343436-11343455 Msa0238070:intron 70.0%
!! GGTGGTGGTGGCGGTGGTGG+TGG - chr2_2:11341787-11341806 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 11341581 11348592 11341581 ID=Msa0238070;Name=Msa0238070
chr2_2 mRNA 11341581 11348592 11341581 ID=Msa0238070-mRNA-1;Parent=Msa0238070;Name=Msa0238070-mRNA-1;_AED=0.04;_eAED=0.04;_QI=131|1|1|1|1|1|3|77|383
chr2_2 exon 11341581 11342226 11341581 ID=Msa0238070-mRNA-1:exon:4922;Parent=Msa0238070-mRNA-1
chr2_2 exon 11347122 11347644 11347122 ID=Msa0238070-mRNA-1:exon:4923;Parent=Msa0238070-mRNA-1
chr2_2 exon 11348402 11348592 11348402 ID=Msa0238070-mRNA-1:exon:4924;Parent=Msa0238070-mRNA-1
chr2_2 five_prime_UTR 11341581 11341711 11341581 ID=Msa0238070-mRNA-1:five_prime_utr;Parent=Msa0238070-mRNA-1
chr2_2 CDS 11341712 11342226 11341712 ID=Msa0238070-mRNA-1:cds;Parent=Msa0238070-mRNA-1
chr2_2 CDS 11347122 11347644 11347122 ID=Msa0238070-mRNA-1:cds;Parent=Msa0238070-mRNA-1
chr2_2 CDS 11348402 11348515 11348402 ID=Msa0238070-mRNA-1:cds;Parent=Msa0238070-mRNA-1
chr2_2 three_prime_UTR 11348516 11348592 11348516 ID=Msa0238070-mRNA-1:three_prime_utr;Parent=Msa0238070-mRNA-1
Gene Sequence

>Msa0238070

ATGGGTATTACGTGGAGTAACAGAAGAAGAAACAATTTCATTCAAAACCCACCTCCACAACCACCCCAACTTCCACCACCACCGCCACCACCACCTTACTATTACTCAACAGAACCACACCCTCCACCACCACCACCACCTCAACAAAGTTACTACTATCCCCCCTCAACTACTCCTTACACCCCACAACCTCAACCACAGCCCCATTCATTCTACTTCTCCAACCCTAACAATAACTATCCTCCCAATTCCACTACCAATCGTATTCAATATCATCCTTCATATCATCTCAATCAACAACAACAACCGCAATATGCATGGCCTCCACCTCCTCCCCCTTTTTACGCTCCTGCTGCTGCTTCTTCCACTCCACCTCCTTATGTTGATCATCAAACTGCTAAAAAGATTAGAAACAATGTTAATGTTCATAAGGATACGCTTCGCCTTGAGATTGATCAGCTTAACCCTGATCATTACCTTGTTTCTTTTGTTTTCGATGCCGTCTTTGATGGAAGCATTACTGTCTTTTACTTTGCGAAGGAAGAAGATAAATGTAGGTTTGTTCCACTCTTTCCTGATGCATTTGTGCCAGTCAAAGTCCCCTTTAAGAAAGGAGTTGGCCAGAAATTTGCTCAGCCTTCAGGAACAGGGATTGACCTAGGCTTCTTTGAGTTAGATGATCTTTCAAAGCCTTCACCTGGGGAAGATGTCTTTCCTCTTGTAATATGCGCTGAAACATGTTTGGAAACTCCCTCGGAAAACGAAACTCCTAAAACTCCTGATGATTCCGTGCTAGATGCATCCCCTCACATGCAAATTACTCAAGCTGTCTTGGAGAAAAGTAATGGTGGTGGTGCTTTCCAGATAAAAGTAGTTAGACAGATTCTGTGGATTGATGGTGTTCGTTATGAGTTAAGAGAACTATATGGAATAGGAAGCTCAGAAGCTGCAGGCTTTGATGACAGTGATCCTGGGAAGGAGTGTGTAATATGCATGACTGAACCAAAGGATACAGCTGTCTTACCTTGTCGACATATGTGTTTGTGCAGTGAGTGTGCAAAAGCTCTGCGGCTTCAATCCAATAAATGCCCTATATGCCGTCAGCCAATTGAGGAACTTATGGAGATCAGGGTGAAGAGTAGCGATCCATGA

Protein sequence

>Msa0238070

MGITWSNRRRNNFIQNPPPQPPQLPPPPPPPPYYYSTEPHPPPPPPPQQSYYYPPSTTPYTPQPQPQPHSFYFSNPNNNYPPNSTTNRIQYHPSYHLNQQQQPQYAWPPPPPPFYAPAAASSTPPPYVDHQTAKKIRNNVNVHKDTLRLEIDQLNPDHYLVSFVFDAVFDGSITVFYFAKEEDKCRFVPLFPDAFVPVKVPFKKGVGQKFAQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENETPKTPDDSVLDASPHMQITQAVLEKSNGGGAFQIKVVRQILWIDGVRYELRELYGIGSSEAAGFDDSDPGKECVICMTEPKDTAVLPCRHMCLCSECAKALRLQSNKCPICRQPIEELMEIRVKSSDP*