AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0220840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0220840 MtrunA17_Chr2g0331161 95.439 899 23 2 1 899 1 881 0.0 1739
Msa0220840 MtrunA17_Chr3g0143721 39.009 464 244 7 420 861 249 695 1.54e-92 307
Msa0220840 MtrunA17_Chr4g0052411 39.323 473 240 9 414 862 223 672 1.98e-88 296
Msa0220840 MtrunA17_Chr2g0297281 39.112 473 242 9 414 863 280 729 1.86e-86 292
Msa0220840 MtrunA17_Chr7g0217421 43.200 375 181 7 409 774 25 376 1.26e-82 271
Msa0220840 MtrunA17_Chr1g0158881 38.901 455 233 11 422 862 331 754 7.51e-82 280
Msa0220840 MtrunA17_Chr4g0031821 39.262 461 239 11 420 862 320 757 2.12e-79 274
Msa0220840 MtrunA17_Chr7g0260601 37.773 458 252 8 420 862 240 679 5.34e-78 268
Msa0220840 MtrunA17_Chr7g0248361 36.617 467 245 12 420 862 192 631 8.52e-76 260
Msa0220840 MtrunA17_Chr6g0476861 36.819 459 255 9 420 862 197 636 9.11e-76 261
Msa0220840 MtrunA17_Chr6g0456351 51.351 259 121 3 420 676 317 572 5.32e-74 254
Msa0220840 MtrunA17_Chr8g0362771 36.324 457 257 9 418 862 235 669 1.06e-73 256
Msa0220840 MtrunA17_Chr3g0135721 36.404 456 253 8 420 862 224 655 2.72e-73 255
Msa0220840 MtrunA17_Chr3g0094871 35.870 460 244 9 420 862 11 436 4.88e-73 247
Msa0220840 MtrunA17_Chr5g0429571 39.268 410 220 8 415 819 308 693 6.05e-72 253
Msa0220840 MtrunA17_Chr3g0135761 35.667 457 259 9 418 862 220 653 6.97e-72 251
Msa0220840 MtrunA17_Chr3g0104211 43.646 362 179 7 415 767 299 644 7.00e-72 253
Msa0220840 MtrunA17_Chr8g0388371 39.086 394 207 8 420 797 404 780 9.79e-68 243
Msa0220840 MtrunA17_Chr5g0432631 35.449 457 261 10 418 862 227 661 4.16e-66 238
Msa0220840 MtrunA17_Chr3g0129971 35.021 474 245 11 415 858 291 731 8.08e-61 222
Msa0220840 MtrunA17_Chr5g0432641 34.505 455 268 9 418 862 189 623 1.56e-59 215
Msa0220840 MtrunA17_Chr3g0141901 38.328 287 162 3 390 661 92 378 5.22e-54 193
Msa0220840 MtrunA17_Chr1g0192151 42.797 236 134 1 422 656 169 404 8.15e-54 193
Msa0220840 MtrunA17_Chr4g0014731 42.797 236 134 1 422 656 170 405 1.11e-53 192
Msa0220840 MtrunA17_Chr3g0145011 40.984 244 143 1 419 661 138 381 1.12e-53 192
Msa0220840 MtrunA17_Chr4g0050561 39.676 247 143 3 414 656 150 394 4.87e-51 185
Msa0220840 MtrunA17_Chr1g0180791 41.739 230 133 1 419 647 477 706 1.59e-50 191
Msa0220840 MtrunA17_Chr1g0180791 40.684 263 145 4 394 655 186 438 3.06e-50 190
Msa0220840 MtrunA17_Chr7g0264521 39.924 263 147 4 394 655 187 439 8.58e-50 189
Msa0220840 MtrunA17_Chr7g0264521 40.870 230 135 1 419 647 478 707 1.65e-49 188
Msa0220840 MtrunA17_Chr7g0255721 38.298 282 168 4 368 647 635 912 1.58e-49 189
Msa0220840 MtrunA17_Chr7g0255721 36.245 229 127 5 425 645 391 608 8.75e-30 127
Msa0220840 MtrunA17_Chr1g0168321 34.463 354 172 7 420 768 164 462 2.98e-49 182
Msa0220840 MtrunA17_Chr2g0327121 41.304 230 134 1 419 647 479 708 3.94e-49 187
Msa0220840 MtrunA17_Chr2g0327121 39.163 263 149 4 394 655 188 440 9.24e-49 186
Msa0220840 MtrunA17_Chr7g0262801 40.476 252 146 2 422 672 189 437 3.14e-48 177
Msa0220840 MtrunA17_Chr1g0182711 40.079 252 147 2 422 672 190 438 3.81e-48 177
Msa0220840 MtrunA17_Chr8g0345461 38.710 248 149 3 414 659 159 405 2.77e-47 174
Msa0220840 MtrunA17_Chr3g0135781 50.920 163 77 1 419 581 54 213 3.48e-46 164
Msa0220840 MtrunA17_Chr1g0200081 38.306 248 149 4 414 659 169 414 5.76e-45 168
Msa0220840 MtrunA17_Chr2g0277831 43.363 226 122 3 419 641 532 754 6.33e-44 171
Msa0220840 MtrunA17_Chr2g0277831 39.344 244 138 3 422 658 245 485 2.58e-38 154
Msa0220840 MtrunA17_Chr7g0255641 39.738 229 136 2 420 647 658 885 7.61e-44 172
Msa0220840 MtrunA17_Chr7g0255641 35.498 231 127 8 425 647 401 617 2.94e-26 116
Msa0220840 MtrunA17_Chr7g0255651 37.991 229 141 1 420 647 282 510 1.09e-41 161
Msa0220840 MtrunA17_Chr7g0255651 30.144 209 132 5 447 647 41 243 1.46e-17 87.4
Msa0220840 MtrunA17_Chr3g0108321 44.318 176 97 1 419 593 158 333 3.80e-41 155
Msa0220840 MtrunA17_Chr7g0255691 39.738 229 137 1 420 647 286 514 2.19e-40 157
Msa0220840 MtrunA17_Chr7g0255691 36.224 196 111 5 449 636 47 236 7.63e-24 107
Msa0220840 MtrunA17_Chr4g0043381 36.015 261 153 5 424 673 841 1098 5.52e-40 160
Msa0220840 MtrunA17_Chr4g0033451 36.508 252 148 5 412 655 372 619 1.60e-38 155
Msa0220840 MtrunA17_Chr8g0357301 28.145 469 269 12 435 854 485 934 1.18e-36 149
Msa0220840 MtrunA17_Chr4g0004121 37.453 267 146 7 394 645 211 471 3.01e-36 144
Msa0220840 MtrunA17_Chr3g0086411 37.066 259 139 5 419 656 214 469 3.23e-36 144
Msa0220840 MtrunA17_Chr3g0086411 37.195 164 88 4 507 658 7 167 3.56e-19 92.0
Msa0220840 MtrunA17_Chr7g0255901 37.104 221 127 7 419 632 638 853 4.15e-36 147
Msa0220840 MtrunA17_Chr3g0086401 38.525 244 126 5 419 641 384 624 2.65e-35 143
Msa0220840 MtrunA17_Chr3g0086401 36.000 250 135 7 422 654 94 335 9.48e-32 132
Msa0220840 MtrunA17_Chr2g0321241 39.912 228 117 7 419 637 131 347 7.98e-35 138
Msa0220840 MtrunA17_Chr2g0316851 32.013 303 168 9 359 645 543 823 2.60e-34 142
Msa0220840 MtrunA17_Chr2g0327231 41.975 162 93 1 419 579 345 506 6.05e-34 137
Msa0220840 MtrunA17_Chr4g0038101 34.468 235 130 6 418 640 719 941 1.14e-33 140
Msa0220840 MtrunA17_Chr1g0190401 25.249 503 312 16 420 863 677 1174 1.30e-33 140
Msa0220840 MtrunA17_Chr4g0026631 38.596 228 120 7 419 637 126 342 8.22e-33 132
Msa0220840 MtrunA17_Chr1g0195731 37.179 234 137 6 418 646 932 1160 1.39e-32 136
Msa0220840 MtrunA17_Chr8g0387641 31.313 297 177 9 418 698 519 804 1.99e-32 135
Msa0220840 MtrunA17_Chr1g0195741 36.752 234 138 6 418 646 936 1164 4.66e-32 135
Msa0220840 MtrunA17_Chr3g0116131 37.281 228 133 6 418 640 900 1122 1.14e-31 134
Msa0220840 MtrunA17_Chr1g0202371 35.065 231 132 7 418 640 395 615 1.26e-30 129
Msa0220840 MtrunA17_Chr6g0459561 33.745 243 144 9 412 646 374 607 3.81e-30 127
Msa0220840 MtrunA17_Chr5g0397121 30.175 285 185 7 418 698 511 785 6.11e-30 127
Msa0220840 MtrunA17_Chr1g0202381 32.906 234 146 7 418 646 466 693 1.24e-29 126
Msa0220840 MtrunA17_Chr6g0462581 34.764 233 142 7 418 646 498 724 1.47e-29 126
Msa0220840 MtrunA17_Chr3g0127431 30.992 242 140 7 418 646 82 309 9.84e-29 119
Msa0220840 MtrunA17_Chr1g0204031 33.475 236 142 7 418 646 555 782 2.74e-28 122
Msa0220840 MtrunA17_Chr4g0052271 32.955 264 146 8 405 651 99 348 4.60e-28 117
Msa0220840 MtrunA17_Chr6g0459541 30.100 299 169 10 419 685 41 331 1.29e-27 115
Msa0220840 MtrunA17_Chr3g0127401 30.992 242 140 7 418 646 79 306 1.76e-27 115
Msa0220840 MtrunA17_Chr5g0432391 36.500 200 121 2 494 693 78 271 1.78e-27 116
Msa0220840 MtrunA17_Chr7g0246111 32.549 255 154 7 414 660 206 450 7.90e-26 112
Msa0220840 MtrunA17_Chr4g0047411 31.955 266 145 8 427 659 179 441 6.67e-25 111
Msa0220840 MtrunA17_Chr6g0459551 33.937 221 131 9 412 627 94 304 9.23e-23 102
Msa0220840 MtrunA17_Chr1g0155131 28.125 192 104 5 430 595 207 390 3.84e-13 72.8
Msa0220840 MtrunA17_Chr4g0062081 39.744 78 45 2 423 498 10 87 3.95e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0220840 AT3G16290.1 63.401 888 293 10 7 889 3 863 0.0 1086
Msa0220840 AT5G42270.1 40.466 472 241 8 420 869 247 700 1.10e-94 313
Msa0220840 AT1G50250.1 38.983 472 248 8 420 869 259 712 6.11e-92 306
Msa0220840 AT2G30950.1 40.685 467 231 9 414 857 218 661 9.58e-90 300
Msa0220840 AT2G30950.2 40.685 467 231 9 414 857 218 661 9.58e-90 300
Msa0220840 AT2G30950.3 40.685 467 231 9 414 857 218 661 9.58e-90 300
Msa0220840 AT2G30950.4 40.685 467 231 9 414 857 222 665 9.88e-90 300
Msa0220840 AT5G15250.1 39.103 468 238 9 414 857 215 659 5.31e-87 292
Msa0220840 AT1G06430.1 38.758 467 240 9 414 857 211 654 2.28e-86 291
Msa0220840 AT1G06430.3 38.758 467 240 9 414 857 211 654 2.28e-86 291
Msa0220840 AT1G06430.2 38.758 467 240 9 414 857 211 654 2.28e-86 291
Msa0220840 AT5G53170.1 40.089 449 236 10 422 862 361 784 1.15e-81 281
Msa0220840 AT1G07510.1 37.609 460 248 10 420 862 324 761 6.63e-76 265
Msa0220840 AT3G47060.1 40.049 407 217 8 417 819 319 702 6.17e-74 259
Msa0220840 AT2G26140.1 36.703 455 253 8 420 862 224 655 7.31e-74 257
Msa0220840 AT5G15250.2 46.801 297 130 5 414 682 215 511 8.22e-74 251
Msa0220840 AT2G29080.1 37.662 462 246 10 420 862 319 757 1.84e-72 255
Msa0220840 AT5G58870.1 38.821 407 222 7 417 819 323 706 9.69e-72 253
Msa0220840 AT3G02450.1 47.902 286 143 3 420 702 331 613 1.82e-71 248
Msa0220840 AT4G23940.1 33.871 496 269 10 420 871 427 907 3.28e-68 245
Msa0220840 AT5G64580.1 34.615 468 255 12 415 858 308 748 5.48e-60 220
Msa0220840 AT1G45000.1 39.024 287 160 3 390 661 92 378 1.45e-54 195
Msa0220840 AT5G43010.1 38.676 287 161 3 390 661 92 378 1.50e-54 195
Msa0220840 AT3G05530.1 43.644 236 132 1 422 656 170 405 1.07e-53 193
Msa0220840 AT1G09100.1 42.373 236 135 1 422 656 169 404 8.02e-52 188
Msa0220840 AT5G19990.2 39.841 251 145 3 414 660 94 342 8.85e-52 186
Msa0220840 AT5G19990.1 40.081 247 142 3 414 656 152 396 1.14e-51 187
Msa0220840 AT5G19990.3 40.081 247 142 3 414 656 152 396 1.14e-51 187
Msa0220840 AT5G20000.1 40.081 247 142 3 414 656 152 396 1.52e-51 187
Msa0220840 AT3G09840.1 39.924 263 147 3 394 655 185 437 9.76e-51 192
Msa0220840 AT3G09840.1 40.260 231 136 2 419 647 476 706 8.52e-45 174
Msa0220840 AT3G53230.1 39.924 263 147 3 394 655 186 438 4.32e-50 190
Msa0220840 AT3G53230.1 40.870 230 135 1 419 647 477 706 1.95e-49 188
Msa0220840 AT5G03340.1 39.544 263 148 3 394 655 185 437 5.47e-50 190
Msa0220840 AT5G03340.1 40.435 230 136 1 419 647 476 705 1.94e-49 188
Msa0220840 AT2G20140.1 41.667 252 143 2 422 672 187 435 3.29e-49 181
Msa0220840 AT4G29040.1 41.270 252 144 2 422 672 187 435 4.57e-49 181
Msa0220840 AT1G53750.1 38.057 247 152 1 414 659 159 405 4.59e-47 174
Msa0220840 AT5G58290.1 38.912 239 145 1 419 656 151 389 6.15e-47 173
Msa0220840 AT3G56690.1 36.508 315 190 7 371 681 676 984 9.96e-47 181
Msa0220840 AT3G56690.1 33.878 245 154 3 406 645 364 605 1.04e-30 130
Msa0220840 AT1G53780.3 36.614 254 160 1 414 666 330 583 3.27e-46 176
Msa0220840 AT1G53780.1 36.614 254 160 1 414 666 331 584 3.47e-46 176
Msa0220840 AT1G53780.4 36.614 254 160 1 414 666 331 584 3.47e-46 176
Msa0220840 AT1G53780.2 36.614 254 160 1 414 666 352 605 4.79e-46 176
Msa0220840 AT3G01610.2 43.145 248 133 6 419 662 524 767 8.59e-42 165
Msa0220840 AT3G01610.2 41.036 251 125 5 422 655 232 476 1.69e-41 164
Msa0220840 AT3G01610.1 43.145 248 133 6 419 662 524 767 9.02e-42 165
Msa0220840 AT3G01610.1 41.036 251 125 5 422 655 232 476 1.86e-41 164
Msa0220840 AT2G03670.1 38.261 230 140 2 420 647 283 512 8.58e-39 154
Msa0220840 AT2G03670.1 32.627 236 140 6 435 661 34 259 6.60e-25 111
Msa0220840 AT1G05910.1 36.220 254 146 6 412 655 370 617 1.06e-38 156
Msa0220840 AT1G79560.3 34.797 296 161 7 435 710 505 788 2.55e-38 155
Msa0220840 AT1G79560.1 34.797 296 161 7 435 710 505 788 2.93e-38 155
Msa0220840 AT1G79560.2 34.797 296 161 7 435 710 505 788 2.99e-38 155
Msa0220840 AT5G08470.1 31.900 279 176 6 408 675 829 1104 1.43e-36 149
Msa0220840 AT5G08470.3 31.900 279 176 6 408 675 820 1095 1.79e-36 149
Msa0220840 AT1G03000.1 36.239 218 133 6 419 632 654 869 3.70e-35 145
Msa0220840 AT1G80350.1 38.645 251 133 7 410 645 221 465 9.37e-35 140
Msa0220840 AT3G15120.2 32.886 298 163 9 359 641 676 951 7.91e-34 141
Msa0220840 AT3G15120.1 32.886 298 163 9 359 641 666 941 8.68e-34 141
Msa0220840 AT1G02890.1 37.719 228 132 6 418 640 939 1161 3.04e-33 139
Msa0220840 AT4G02480.1 38.596 228 130 6 418 640 958 1180 1.18e-32 137
Msa0220840 AT2G27600.1 36.402 239 132 7 419 648 128 355 1.22e-31 129
Msa0220840 AT1G64110.5 34.728 239 135 7 418 646 514 741 1.29e-31 133
Msa0220840 AT1G64110.3 34.728 239 135 7 418 646 514 741 1.29e-31 133
Msa0220840 AT1G64110.1 34.728 239 135 7 418 646 511 738 1.29e-31 133
Msa0220840 AT1G64110.2 34.728 239 135 7 418 646 516 743 1.38e-31 133
Msa0220840 AT1G64110.4 34.728 239 135 7 418 646 516 743 1.38e-31 133
Msa0220840 AT3G27120.1 33.074 257 153 9 412 656 392 641 2.63e-31 131
Msa0220840 AT4G24860.1 36.667 240 126 7 414 640 811 1037 1.05e-30 131
Msa0220840 AT4G24860.3 36.667 240 126 7 414 640 809 1035 1.09e-30 130
Msa0220840 AT1G50140.2 34.783 230 136 6 418 640 687 909 1.13e-30 130
Msa0220840 AT1G50140.5 34.783 230 136 6 418 640 687 909 1.13e-30 130
Msa0220840 AT1G50140.3 34.783 230 136 6 418 640 709 931 1.41e-30 130
Msa0220840 AT1G50140.1 34.783 230 136 6 418 640 709 931 1.41e-30 130
Msa0220840 AT1G50140.4 34.783 230 136 6 418 640 709 931 1.41e-30 130
Msa0220840 AT4G24860.4 36.667 240 126 7 414 640 784 1010 1.49e-30 130
Msa0220840 AT4G24860.2 36.667 240 126 7 414 640 807 1033 1.71e-30 130
Msa0220840 AT2G34560.1 33.466 251 151 7 405 645 80 324 3.17e-30 124
Msa0220840 AT2G34560.2 33.466 251 151 7 405 645 89 333 3.69e-30 124
Msa0220840 AT3G19740.1 32.157 255 149 6 418 660 699 941 8.39e-30 128
Msa0220840 AT2G45500.4 32.042 284 164 9 414 681 74 344 2.09e-29 121
Msa0220840 AT2G45500.3 32.042 284 164 9 414 681 74 344 2.09e-29 121
Msa0220840 AT4G28000.3 32.618 233 147 6 418 646 515 741 3.38e-29 125
Msa0220840 AT4G28000.2 32.618 233 147 6 418 646 515 741 4.24e-29 125
Msa0220840 AT4G28000.1 32.618 233 147 6 418 646 513 739 4.65e-29 125
Msa0220840 AT2G45500.2 32.042 284 164 9 414 681 207 477 1.17e-28 121
Msa0220840 AT2G45500.1 32.042 284 164 9 414 681 211 481 1.47e-28 121
Msa0220840 AT2G45500.5 32.042 284 164 9 414 681 217 487 1.49e-28 121
Msa0220840 AT5G52882.1 28.981 314 207 10 339 646 435 738 1.71e-28 123
Msa0220840 AT3G04340.1 32.203 236 146 3 401 632 772 997 1.22e-27 121
Msa0220840 AT1G45000.2 35.829 187 105 3 390 561 92 278 8.95e-26 110
Msa0220840 AT2G03670.2 32.627 236 140 6 435 661 34 259 2.19e-25 110
Msa0220840 AT2G03670.2 38.571 140 84 2 420 557 283 422 2.69e-17 85.9
Msa0220840 AT4G27680.1 30.417 240 144 7 418 646 79 306 5.90e-25 108
Msa0220840 AT4G04910.1 30.739 257 152 7 427 663 216 466 6.91e-25 111
Msa0220840 AT1G62130.1 33.480 227 131 6 418 640 748 958 1.92e-24 110
Msa0220840 AT1G62130.2 33.480 227 131 6 418 640 741 951 2.06e-24 110
Msa0220840 AT5G53540.1 28.870 239 149 6 418 646 82 309 2.98e-24 106
Msa0220840 AT1G02890.2 34.802 227 112 8 418 640 939 1133 1.63e-23 108
Msa0220840 AT4G04180.2 29.060 234 142 8 419 639 310 532 6.93e-18 89.0
Msa0220840 AT4G04180.1 29.060 234 142 8 419 639 315 537 1.03e-17 88.2
Msa0220840 AT5G08470.2 28.395 162 112 3 408 568 829 987 4.64e-15 80.5

Find 232 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCAAGTGCCCCACCAATTT+TGG 0.110749 2_1:-69354451 Msa0220840:three_prime_UTR
AATAGCTGAATTGAAGAATT+TGG 0.130395 2_1:-69359793 Msa0220840:CDS
TTGTTTGATAAAATAAATTT+TGG 0.131015 2_1:-69354370 Msa0220840:three_prime_UTR
TTGAAAGTGATAGAAAATTT+TGG 0.170581 2_1:-69359659 Msa0220840:CDS
ATCGCGGAGTATCCAATTTC+TGG 0.182119 2_1:-69355167 Msa0220840:CDS
CATTTGAAATAAATTGTTAT+TGG 0.204398 2_1:-69356231 Msa0220840:CDS
TGATGAGATTGAACGGAATT+TGG 0.219689 2_1:+69360079 None:intergenic
GAACGGAATTTGGAGGGTTT+TGG 0.227467 2_1:+69360089 None:intergenic
TTACATACCTTTATAGAGTA+TGG 0.235970 2_1:-69354312 Msa0220840:three_prime_UTR
AATTCAGCTATTTCAGTATA+AGG 0.258845 2_1:+69359804 None:intergenic
CAGCTCCTGGTGTGCTTAGA+TGG 0.260882 2_1:-69357866 Msa0220840:CDS
ACAAAGGAGTTTATGAAATC+TGG 0.266109 2_1:-69358994 Msa0220840:CDS
AAGGATAAAATGGCGATTAA+TGG 0.283284 2_1:-69359240 Msa0220840:CDS
AAGACGAACAATGTCTTCTT+TGG 0.284622 2_1:+69354592 None:intergenic
TCGAAATATACGTTGGTGTT+GGG 0.286495 2_1:-69358419 Msa0220840:CDS
AGGAAGCGTGGCTTGATTAA+AGG 0.286757 2_1:-69358018 Msa0220840:CDS
TATTCGATATTGTCGAAATT+AGG 0.294536 2_1:+69356271 None:intergenic
CTTTGGTTGAGTTTGTTAAT+AGG 0.298577 2_1:-69359512 Msa0220840:CDS
CACAAATCGACCAGACATTC+TGG 0.302167 2_1:-69357807 Msa0220840:CDS
CGGCCAATGAAACCGGGTTT+GGG 0.302512 2_1:+69357737 None:intergenic
GAGAAGGAGGAAAGAGTATA+AGG 0.303304 2_1:-69359325 Msa0220840:CDS
ATAGCTGAATTGAAGAATTT+GGG 0.316433 2_1:-69359792 Msa0220840:CDS
AACAATGTCTTCTTTGGTTA+AGG 0.317332 2_1:+69354598 None:intergenic
TATTTCAGTTGAGTACGATA+TGG 0.319244 2_1:-69355257 Msa0220840:intron
TTTCTATCACTTTCAACATT+TGG 0.322261 2_1:+69359666 None:intergenic
ATTTGAAATAAATTGTTATT+GGG 0.324719 2_1:-69356230 Msa0220840:intron
TTCAATGCGGCCAATGAAAC+CGG 0.331236 2_1:+69357730 None:intergenic
TCCTAGAGCTGGTAGGGAAT+TGG 0.332040 2_1:-69356097 Msa0220840:CDS
TCGGTCTGTAACCCAGAAAT+TGG 0.334866 2_1:+69355155 None:intergenic
TGTTGCAGTATTGGTTGTTT+TGG 0.338139 2_1:-69359718 Msa0220840:CDS
CAGAAAAGCTTCATCCAAAA+AGG 0.341687 2_1:-69359895 Msa0220840:CDS
TCGTATGGCGAAGGATAAAA+TGG 0.344094 2_1:-69359250 Msa0220840:CDS
TTCTTGTAGTTCTTTACGTT+TGG 0.345721 2_1:+69354511 None:intergenic
GGCATCTCTGGAACCTTAAC+AGG 0.347689 2_1:+69359582 None:intergenic
TCTGCCATTTCACAAGCCTT+TGG 0.353297 2_1:-69359529 Msa0220840:CDS
CTTATGTCAAGTACGCTAAT+AGG 0.353573 2_1:+69354539 None:intergenic
TTTCGGTATTGGCAAGGATT+TGG 0.361039 2_1:-69359557 Msa0220840:CDS
AAAATGGCGATTAATGGAAT+TGG 0.362031 2_1:-69359234 Msa0220840:CDS
AGAGATGCCGCTTTCGGTAT+TGG 0.368018 2_1:-69359568 Msa0220840:CDS
TGCATATTCACCACCTGTTA+AGG 0.373177 2_1:-69359595 Msa0220840:CDS
GCGGCCAATGAAACCGGGTT+TGG 0.374736 2_1:+69357736 None:intergenic
TGTTGTCTTCATTGATGAGC+TGG 0.375722 2_1:-69358052 Msa0220840:CDS
AAAATGTCCATACTCTATAA+AGG 0.381982 2_1:+69354305 None:intergenic
CCTAGAGCTGGTAGGGAATT+GGG 0.382021 2_1:-69356096 Msa0220840:CDS
AGCAATGTCTTTCCCACTCC+AGG 0.382652 2_1:+69358504 None:intergenic
TGTTATGTTTGTGAAGCTAT+TGG 0.384693 2_1:+69360239 None:intergenic
GCGACGGCAGTGGCGGGTTG+CGG 0.390780 2_1:+69359942 None:intergenic
AGGAGCGAAGCAAAGAGAAA+TGG 0.393360 2_1:-69356345 Msa0220840:CDS
GCCACTGCCGTCGCCGCCGC+TGG 0.394891 2_1:-69359933 Msa0220840:CDS
AATACCGAAAGCGGCATCTC+TGG 0.395372 2_1:+69359570 None:intergenic
CTATTAGCGTACTTGACATA+AGG 0.396397 2_1:-69354538 Msa0220840:CDS
CTGCATTTGTTGACCAGGGA+AGG 0.397042 2_1:-69354272 Msa0220840:three_prime_UTR
CTTATTACAAGCTGCTCAAA+TGG 0.399209 2_1:-69356392 Msa0220840:CDS
TCAAGTACGCTAATAGGAAT+TGG 0.400029 2_1:+69354545 None:intergenic
AGGTATGCGTTCTGAAACAA+TGG 0.402432 2_1:+69359824 None:intergenic
CGGTGAGTTTGAGGAAATTG+AGG 0.403612 2_1:+69359994 None:intergenic
GGTTCCAGAGATGCCGCTTT+CGG 0.403842 2_1:-69359574 Msa0220840:CDS
CGTGGCTTGATTAAAGGTTC+AGG 0.405720 2_1:-69358012 Msa0220840:CDS
AGCGGCGGCGACGGCAGTGG+CGG 0.407661 2_1:+69359935 None:intergenic
GTCGAAATATACGTTGGTGT+TGG 0.410252 2_1:-69358420 Msa0220840:CDS
AGAAGAAGGATTATGAAGAT+AGG 0.412757 2_1:-69359158 Msa0220840:CDS
ATCCCCAAACCCGGTTTCAT+TGG 0.412820 2_1:-69357740 Msa0220840:CDS
GTATTGTCAGGAAATTGATT+TGG 0.415753 2_1:-69354868 Msa0220840:intron
GAAGAAGGAGTTGGAGTTGA+GGG 0.416219 2_1:-69359469 Msa0220840:CDS
TCAGGTGGCATACTTCTTTG+TGG 0.418576 2_1:-69358531 Msa0220840:intron
AGTTGGAGTTGAGGGAAGCT+AGG 0.420328 2_1:-69359461 Msa0220840:CDS
GTGAAGTTTACTGATGTTGC+TGG 0.422967 2_1:-69358910 Msa0220840:CDS
TAGTCTACATCTTCAGCAAT+TGG 0.423947 2_1:+69357529 None:intergenic
TTGAAGGAATAGTGTACTTT+CGG 0.425121 2_1:+69360331 None:intergenic
TTCGAAGAGCACAAAATAGA+AGG 0.425281 2_1:-69358963 Msa0220840:CDS
GCGGCGGCGACGGCAGTGGC+GGG 0.426088 2_1:+69359936 None:intergenic
TCCAGCGGCGGCGACGGCAG+TGG 0.430429 2_1:+69359932 None:intergenic
CCACATTTCATCAGCTGCAC+GGG 0.431323 2_1:+69355744 None:intergenic
GTGTTATTTCCACCCTTCCC+TGG 0.432558 2_1:+69354259 None:intergenic
ACGTGATGCTACTCTTAATC+AGG 0.435432 2_1:-69357980 Msa0220840:intron
TTTACTGATGTTGCTGGTCT+CGG 0.439119 2_1:-69358904 Msa0220840:CDS
ATTTCAGTTGAGTACGATAT+GGG 0.440656 2_1:-69355256 Msa0220840:intron
AAAGCTGTGGCTGGTGAAGC+AGG 0.440885 2_1:-69358477 Msa0220840:CDS
AAGGAAATAGACGAATCATA+AGG 0.441636 2_1:-69354473 Msa0220840:exon
CAAAGGAGTTTATGAAATCT+GGG 0.442190 2_1:-69358993 Msa0220840:CDS
GTGAAGTAGTTCACAGTTGA+AGG 0.443706 2_1:+69360315 None:intergenic
GAGAGTGAGCTGGTGAAAGA+AGG 0.444559 2_1:-69359042 Msa0220840:CDS
CGAAGAAGGAGTTGGAGTTG+AGG 0.449964 2_1:-69359470 Msa0220840:CDS
TAGATGGATTTGAAGGAAGA+GGG 0.450580 2_1:-69357850 Msa0220840:CDS
TCAACCAAAGGCTTGTGAAA+TGG 0.453905 2_1:+69359525 None:intergenic
GGTTGAAGCTTTGTCAATAG+AGG 0.456147 2_1:-69359874 Msa0220840:CDS
GTCTTCTGCATTTGTTGACC+AGG 0.456258 2_1:-69354277 Msa0220840:three_prime_UTR
CAGAATGTCTGGTCGATTTG+TGG 0.458023 2_1:+69357808 None:intergenic
GATTAAAGGTTCAGGTGGAC+AGG 0.459607 2_1:-69358004 Msa0220840:CDS
AACCATTCCATCAGTCATAC+TGG 0.460173 2_1:+69357495 None:intergenic
GAGAGGAATGCTAGATAGAA+AGG 0.460773 2_1:-69356365 Msa0220840:CDS
CGGCCAGGTCTTACAAGTGC+TGG 0.462592 2_1:+69357782 None:intergenic
ACCTAGTGCCGTGGAATTGA+GGG 0.465754 2_1:-69359748 Msa0220840:CDS
TATTAGCGTACTTGACATAA+GGG 0.467140 2_1:-69354537 Msa0220840:CDS
CAGCTGATGAAATGTGGTTT+GGG 0.468569 2_1:-69355738 Msa0220840:CDS
GCAGCTGATGAAATGTGGTT+TGG 0.471337 2_1:-69355739 Msa0220840:CDS
ATTGTCAAGTTCTTCACTCA+TGG 0.475018 2_1:-69358856 Msa0220840:CDS
TCGCGGAGTATCCAATTTCT+GGG 0.479340 2_1:-69355166 Msa0220840:CDS
GGAGCGAAGCAAAGAGAAAT+GGG 0.479958 2_1:-69356344 Msa0220840:CDS
GAGATGGGGTGGAGTGAAGC+TGG 0.481301 2_1:-69359078 Msa0220840:CDS
GCAATGTCTTTCCCACTCCA+GGG 0.481979 2_1:+69358505 None:intergenic
TGAGGGTTACGGTGAGTTTG+AGG 0.482439 2_1:+69359985 None:intergenic
ACAGAGCACGTACATTAATT+CGG 0.485083 2_1:+69355136 None:intergenic
GAAGGAGATGGAAGCCGAGA+TGG 0.485467 2_1:-69359094 Msa0220840:CDS
CGAAATATACGTTGGTGTTG+GGG 0.486616 2_1:-69358418 Msa0220840:CDS
TGCATTTGTTGACCAGGGAA+GGG 0.487130 2_1:-69354271 Msa0220840:three_prime_UTR
GCAGCAAGAATGTATATGAT+TGG 0.489344 2_1:-69355207 Msa0220840:CDS
AGTGCTGGATCCAGAATGTC+TGG 0.491901 2_1:+69357797 None:intergenic
GGAACGTGCTGTTGCAGTAT+TGG 0.493001 2_1:-69359727 Msa0220840:CDS
AGGAGAGGGAGATGATTGAG+AGG 0.497186 2_1:-69359392 Msa0220840:CDS
TGGCCGCATTGAAATTCTAA+AGG 0.497206 2_1:-69357720 Msa0220840:intron
TCGACAATATCGAATATGTA+TGG 0.497607 2_1:-69356264 Msa0220840:CDS
CTGAAACTGCAGATAATGCT+AGG 0.500415 2_1:-69355233 Msa0220840:CDS
TGGTGAAGAAGATGAAGGAG+AGG 0.503117 2_1:-69359407 Msa0220840:CDS
TGGAGTGGGAAAGACATTGC+TGG 0.503720 2_1:-69358502 Msa0220840:CDS
TAAGACCTGGCCGGTTTGAT+CGG 0.504822 2_1:-69357772 Msa0220840:CDS
AGGAAATAGACGAATCATAA+GGG 0.505852 2_1:-69354472 Msa0220840:exon
GGGATATGTTCGGACGATGC+TGG 0.505978 2_1:-69356076 Msa0220840:CDS
AACCTAGTGCCGTGGAATTG+AGG 0.508221 2_1:-69359749 Msa0220840:CDS
TTGCTATGTACGCGCAAAAG+AGG 0.508242 2_1:-69354823 Msa0220840:intron
AGATGATTGAGAGGAATGAG+AGG 0.512171 2_1:-69359383 Msa0220840:CDS
TGAGATTGAACGGAATTTGG+AGG 0.516156 2_1:+69360082 None:intergenic
GAGAAGGAAGATGAAGGAGA+TGG 0.516355 2_1:-69359106 Msa0220840:CDS
GTAGGGAATTGGGATATGTT+CGG 0.518819 2_1:-69356086 Msa0220840:CDS
CAAGAATGTATATGATTGGC+GGG 0.519116 2_1:-69355203 Msa0220840:CDS
TTAGATGGATTTGAAGGAAG+AGG 0.519462 2_1:-69357851 Msa0220840:CDS
TAAAACACTGATGGATACAT+TGG 0.519745 2_1:-69354645 Msa0220840:CDS
CTACAAGAAATAGCTAGTAA+TGG 0.522806 2_1:-69354497 Msa0220840:CDS
CAATAGAGGAGGTGAAATCA+TGG 0.523991 2_1:-69359860 Msa0220840:CDS
AGAAGTGGTGAAGAAGATGA+AGG 0.534237 2_1:-69359412 Msa0220840:CDS
ATCACAATTGCTCCTAGAGC+TGG 0.534310 2_1:-69356108 Msa0220840:CDS
GTTTATGAAATCTGGGGCAC+GGG 0.535935 2_1:-69358986 Msa0220840:CDS
GGAGATAACAGTGAGGGTTA+CGG 0.536291 2_1:+69359974 None:intergenic
TGAGCTGGTGAAAGAAGGAG+AGG 0.536391 2_1:-69359037 Msa0220840:CDS
GTGTGCTTAGATGGATTTGA+AGG 0.536669 2_1:-69357857 Msa0220840:CDS
GCAGCAAAATAAAACACTGA+TGG 0.537065 2_1:-69354654 Msa0220840:CDS
TCAATGCGGCCAATGAAACC+GGG 0.538715 2_1:+69357731 None:intergenic
CAATGTCTTTCCCACTCCAG+GGG 0.541286 2_1:+69358506 None:intergenic
TGAAGCAGCAATGGCTGTTG+CGG 0.542816 2_1:-69356305 Msa0220840:CDS
AAGGAGATGGAAGCCGAGAT+GGG 0.542842 2_1:-69359093 Msa0220840:CDS
AGATGGATTTGAAGGAAGAG+GGG 0.543391 2_1:-69357849 Msa0220840:CDS
AATTGCTCCTAGAGCTGGTA+GGG 0.543457 2_1:-69356103 Msa0220840:CDS
GTTCGTCTTGTACAATTGCA+TGG 0.543966 2_1:-69354578 Msa0220840:CDS
AGCTATAAATGAAGCAGCAA+TGG 0.544350 2_1:-69356314 Msa0220840:CDS
TCCCTCAATTCCACGGCACT+AGG 0.544440 2_1:+69359747 None:intergenic
ATGAAAAGAGAATGAGAAGG+AGG 0.544985 2_1:-69359338 Msa0220840:CDS
TGCCGCTTTCGGTATTGGCA+AGG 0.545364 2_1:-69359563 Msa0220840:CDS
GAGGTGAAATCATGGATTGA+AGG 0.546110 2_1:-69359852 Msa0220840:CDS
ATCCTTGCCAATACCGAAAG+CGG 0.546993 2_1:+69359561 None:intergenic
TAGCTATAAGAAGCAGAAGA+AGG 0.548045 2_1:-69359172 Msa0220840:CDS
TTGCTGGCAAAAGCTGTGGC+TGG 0.549057 2_1:-69358486 Msa0220840:CDS
GAGATTGAACGGAATTTGGA+GGG 0.550214 2_1:+69360083 None:intergenic
GGTGAAGAAGATGAAGGAGA+GGG 0.552207 2_1:-69359406 Msa0220840:CDS
CCCAATTCCCTACCAGCTCT+AGG 0.556089 2_1:+69356096 None:intergenic
AGTTTATGAAATCTGGGGCA+CGG 0.558950 2_1:-69358987 Msa0220840:CDS
GGAAGAGAGAAGGAAGATGA+AGG 0.562592 2_1:-69359112 Msa0220840:CDS
GGCGGGTTGCGGAAGTGCAG+CGG 0.563989 2_1:+69359953 None:intergenic
AAGCTGATGCGGAAGAGAGA+AGG 0.565192 2_1:-69359122 Msa0220840:CDS
AAGCTAGGATGCGGTTGCAG+AGG 0.567732 2_1:-69359446 Msa0220840:CDS
AGATGGAAGCCGAGATGGGG+TGG 0.568284 2_1:-69359089 Msa0220840:CDS
GGAGAGATGTACCGAAGGAG+AGG 0.569781 2_1:-69358835 Msa0220840:CDS
AGCAGCTTGTAATAAGTCAT+CGG 0.570942 2_1:+69356399 None:intergenic
GCAAGAATGTATATGATTGG+CGG 0.571070 2_1:-69355204 Msa0220840:CDS
AGAAATAGCTAGTAATGGAA+AGG 0.573122 2_1:-69354492 Msa0220840:CDS
TGGATTTGAAGGAAGAGGGG+AGG 0.574895 2_1:-69357846 Msa0220840:CDS
AGCAGCAACCTCAACTATGT+TGG 0.575985 2_1:+69357459 None:intergenic
TTTGATGATGAAGATGAAGG+TGG 0.577498 2_1:+69360140 None:intergenic
ACCACATTTCATCAGCTGCA+CGG 0.578814 2_1:+69355743 None:intergenic
AATGTGGTTTGGGAAAGATC+AGG 0.581440 2_1:-69355728 Msa0220840:intron
GAATTTGTGATGAGATTGAA+CGG 0.581968 2_1:+69360072 None:intergenic
AGCTTCACTCCACCCCATCT+CGG 0.582521 2_1:+69359080 None:intergenic
AAAATCTTTATCCCCAAACC+CGG 0.584127 2_1:-69357749 Msa0220840:CDS
GGCTTGATTAAAGGTTCAGG+TGG 0.584788 2_1:-69358009 Msa0220840:CDS
AGGAGAGGAGTGAAAATCCC+AGG 0.586062 2_1:-69358820 Msa0220840:intron
GACATTGCTGGCAAAAGCTG+TGG 0.588281 2_1:-69358490 Msa0220840:CDS
CAATTTATTTCAAATGCATG+TGG 0.590233 2_1:+69356238 None:intergenic
AAGGAATAGTGTACTTTCGG+TGG 0.591008 2_1:+69360334 None:intergenic
CCCGTGCAGCTGATGAAATG+TGG 0.591550 2_1:-69355744 Msa0220840:CDS
AATGTCTTTCCCACTCCAGG+GGG 0.591798 2_1:+69358507 None:intergenic
GAGGCAGAAGAAAGAAGAAG+TGG 0.592092 2_1:-69359427 Msa0220840:CDS
CAGCACTTGTAAGACCTGGC+CGG 0.593933 2_1:-69357781 Msa0220840:CDS
AGCACGTTCCCTCAATTCCA+CGG 0.595984 2_1:+69359740 None:intergenic
CAAATCCATCTAAGCACACC+AGG 0.597564 2_1:+69357861 None:intergenic
TCATCAATGAAGACAACAGA+AGG 0.598421 2_1:+69358057 None:intergenic
TGCCAGTATGACTGATGGAA+TGG 0.601410 2_1:-69357497 Msa0220840:CDS
GGTATGCGTTCTGAAACAAT+GGG 0.602024 2_1:+69359825 None:intergenic
TCAATATGATGCGAGACTCA+AGG 0.605487 2_1:-69357435 Msa0220840:CDS
GAGTGAAGCTGGCGGTGATG+AGG 0.605914 2_1:-69359067 Msa0220840:CDS
ATTGATGAGCTGGATGCTGT+AGG 0.606216 2_1:-69358042 Msa0220840:CDS
GGCCAATGAAACCGGGTTTG+GGG 0.609790 2_1:+69357738 None:intergenic
TGAAACTGCAGATAATGCTA+GGG 0.613291 2_1:-69355232 Msa0220840:CDS
TGAAGCTTTGTCAATAGAGG+AGG 0.613902 2_1:-69359871 Msa0220840:CDS
GAGTCCATAAAATTTAATGA+CGG 0.615389 2_1:-69356054 Msa0220840:CDS
CAATTGCTCCTAGAGCTGGT+AGG 0.616550 2_1:-69356104 Msa0220840:CDS
GAGGAATAAGAAGAGAGAAG+CGG 0.619519 2_1:-69359364 Msa0220840:CDS
TAAAATACGACTTGAACTTG+AGG 0.620958 2_1:-69358881 Msa0220840:CDS
TCCTTATTTGAAAATGACAA+AGG 0.622517 2_1:-69359010 Msa0220840:CDS
ATCTCTGGAACCTTAACAGG+TGG 0.623029 2_1:+69359585 None:intergenic
TCTTCTGCATTTGTTGACCA+GGG 0.623380 2_1:-69354276 Msa0220840:three_prime_UTR
CAGTTTGTCGAAATATACGT+TGG 0.623555 2_1:-69358426 Msa0220840:CDS
TATAGTGAAACCTAGTGCCG+TGG 0.623564 2_1:-69359757 Msa0220840:CDS
ATTGTTGCCAGTATGACTGA+TGG 0.624270 2_1:-69357502 Msa0220840:CDS
CTATTAACAAACTCAACCAA+AGG 0.625033 2_1:+69359513 None:intergenic
GACTGATGGAATGGTTGGTG+CGG 0.626376 2_1:-69357488 Msa0220840:CDS
AGTATGACTGATGGAATGGT+TGG 0.628958 2_1:-69357493 Msa0220840:CDS
CTCATGGAGAGATGTACCGA+AGG 0.630973 2_1:-69358840 Msa0220840:CDS
TAAGATTCAGAAAGCTGATG+CGG 0.631483 2_1:-69359133 Msa0220840:CDS
TGATGAGGATGAGAGTGAGC+TGG 0.638092 2_1:-69359052 Msa0220840:CDS
AGGAGATGGAAGCCGAGATG+GGG 0.639370 2_1:-69359092 Msa0220840:CDS
ATTTGTTGACCAGGGAAGGG+TGG 0.639797 2_1:-69354268 Msa0220840:three_prime_UTR
AGTTGAGGGAAGCTAGGATG+CGG 0.642061 2_1:-69359455 Msa0220840:CDS
TCAGTATCTTGAGAGAGGTG+TGG 0.645466 2_1:-69358935 Msa0220840:CDS
ATGAAGGTGGAAAATGAACA+AGG 0.646300 2_1:+69360153 None:intergenic
CTTCCTCAGTATCTTGAGAG+AGG 0.646841 2_1:-69358940 Msa0220840:CDS
AGAATGAAAAGAGAATGAGA+AGG 0.647477 2_1:-69359341 Msa0220840:CDS
GATCCAGCACTTGTAAGACC+TGG 0.648592 2_1:-69357785 Msa0220840:CDS
ATGAGCTGGATGCTGTAGGA+AGG 0.654088 2_1:-69358038 Msa0220840:CDS
CACATTTCATCAGCTGCACG+GGG 0.658260 2_1:+69355745 None:intergenic
GCTGCTCAAATGGAAGAGAG+AGG 0.660859 2_1:-69356382 Msa0220840:CDS
AATGTCTGGTCGATTTGTGG+AGG 0.660936 2_1:+69357811 None:intergenic
GGAGCTAGCCAACATAGTTG+AGG 0.661654 2_1:-69357467 Msa0220840:CDS
TGCAGCGGAGATAACAGTGA+GGG 0.672177 2_1:+69359968 None:intergenic
AGCTTGTAATAAGTCATCGG+TGG 0.674000 2_1:+69356402 None:intergenic
ACACCTCTCTCAAGATACTG+AGG 0.678107 2_1:+69358937 None:intergenic
ATGGGGTGGAGTGAAGCTGG+CGG 0.693259 2_1:-69359075 Msa0220840:CDS
GGGCTTTCTGATAAGTATCG+CGG 0.694664 2_1:-69355183 Msa0220840:CDS
AAAGGAGTTTATGAAATCTG+GGG 0.701973 2_1:-69358992 Msa0220840:CDS
ATGTCTTTCCCACTCCAGGG+GGG 0.715851 2_1:+69358508 None:intergenic
GATGCGAGACTCAAGGACTG+AGG 0.717619 2_1:-69357428 Msa0220840:intron
GATGCTGTAGGAAGGAAGCG+TGG 0.718389 2_1:-69358030 Msa0220840:CDS
CTACCTTTAGAATTTCAATG+CGG 0.749694 2_1:+69357717 None:intergenic
GTGCAGCGGAGATAACAGTG+AGG 0.768312 2_1:+69359967 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATTTATTTAAAAATAA+AGG + chr2_1:69358557-69358576 None:intergenic 0.0%
!!! AAAGTTTTTCATTTATATAT+CGG - chr2_1:69355924-69355943 Msa0220840:intron 10.0%
!!! TTTATACATTTTTTTTATCA+AGG - chr2_1:69357613-69357632 Msa0220840:intron 10.0%
!!! ATTTGAAATAAATTGTTATT+GGG - chr2_1:69358318-69358337 Msa0220840:intron 10.0%
!!! ACATTTTATATTAAAATAAG+TGG - chr2_1:69359012-69359031 Msa0220840:CDS 10.0%
!!! CATTTTATATTAAAATAAGT+GGG - chr2_1:69359013-69359032 Msa0220840:CDS 10.0%
!! ATAAAAATTGTAATTTACAA+AGG + chr2_1:69359169-69359188 None:intergenic 10.0%
!!! TTGTTTGATAAAATAAATTT+TGG - chr2_1:69360178-69360197 Msa0220840:exon 10.0%
!!! TGTTTGATAAAATAAATTTT+GGG - chr2_1:69360179-69360198 Msa0220840:exon 10.0%
!! TTAAACTCAAATTATGAATT+TGG - chr2_1:69356244-69356263 Msa0220840:CDS 15.0%
!! ACATGAATAATAATAACTAT+CGG + chr2_1:69357180-69357199 None:intergenic 15.0%
!!! CATTTGAAATAAATTGTTAT+TGG - chr2_1:69358317-69358336 Msa0220840:intron 15.0%
!! TTTAAATAAATATAAGCTGT+TGG - chr2_1:69358562-69358581 Msa0220840:intron 15.0%
!! AATTTACAAAGGAAAAAAAA+AGG + chr2_1:69359158-69359177 None:intergenic 15.0%
!! ATATATGTATATACAGTTTA+TGG - chr2_1:69359235-69359254 Msa0220840:CDS 15.0%
!! ACAAAATAATAATACTTATG+TGG - chr2_1:69359629-69359648 Msa0220840:CDS 15.0%
!!! ATAAAATAAATTTTGGGTTA+GGG - chr2_1:69360185-69360204 Msa0220840:exon 15.0%
!! AAAAAGATAAGGTAATGTTA+TGG + chr2_1:69354340-69354359 None:intergenic 20.0%
!! TTTATGTGATGAAAAAGATA+AGG + chr2_1:69354351-69354370 None:intergenic 20.0%
!!! ATTTTTTGAATTTTGGGTTT+AGG + chr2_1:69354437-69354456 None:intergenic 20.0%
!!! TTGGGAATTTTTTGAATTTT+GGG + chr2_1:69354443-69354462 None:intergenic 20.0%
!!! TTTGGGAATTTTTTGAATTT+TGG + chr2_1:69354444-69354463 None:intergenic 20.0%
!!! TGTTAAAGTTGAGATTTTTT+TGG + chr2_1:69354533-69354552 None:intergenic 20.0%
!!! TTGAAAGTGATAGAAAATTT+TGG - chr2_1:69354889-69354908 Msa0220840:intron 20.0%
!!! TGAAAGTGATAGAAAATTTT+GGG - chr2_1:69354890-69354909 Msa0220840:intron 20.0%
!!! TTTTTTTCGTGATTTTTTAC+AGG - chr2_1:69355342-69355361 Msa0220840:intron 20.0%
!!! CATAAAAAAAGTTTTCCTTT+AGG + chr2_1:69355816-69355835 None:intergenic 20.0%
!! AAATTATGAATTTGGTACTT+TGG - chr2_1:69356252-69356271 Msa0220840:CDS 20.0%
!!! AATTAACTTCTTTTGTCAAT+TGG - chr2_1:69356296-69356315 Msa0220840:CDS 20.0%
!!! ACATTTTATATTATGCTTTC+AGG - chr2_1:69356466-69356485 Msa0220840:intron 20.0%
!!! TGTATATTCATTTTTTTTCC+TGG - chr2_1:69356967-69356986 Msa0220840:intron 20.0%
!! CATGAATAATAATAACTATC+GGG + chr2_1:69357179-69357198 None:intergenic 20.0%
!!! TAAGAGAAAGTTCATTTTTT+AGG + chr2_1:69357310-69357329 None:intergenic 20.0%
!! AAATGAACTTTCTCTTATAA+TGG - chr2_1:69357313-69357332 Msa0220840:intron 20.0%
!! AAATCAAGTATGCAAATAAA+AGG - chr2_1:69357369-69357388 Msa0220840:intron 20.0%
!! CAATGTTATAAAAATCTAAC+CGG - chr2_1:69357525-69357544 Msa0220840:CDS 20.0%
!! AATGTTATAAAAATCTAACC+GGG - chr2_1:69357526-69357545 Msa0220840:CDS 20.0%
!! TAAATCCTATTATGCAAAAA+GGG + chr2_1:69357751-69357770 None:intergenic 20.0%
!!! ATTTAAAAATAAAGGTGCAA+AGG + chr2_1:69358549-69358568 None:intergenic 20.0%
!! AATAAATCAGATGAATATGA+AGG + chr2_1:69358665-69358684 None:intergenic 20.0%
!! GTAGTTACAAGAAAATAATA+TGG + chr2_1:69358730-69358749 None:intergenic 20.0%
!!! AAAAAAAAAGGTGTGATAAA+TGG + chr2_1:69359146-69359165 None:intergenic 20.0%
!! GAATAAAAAATTCCCAAAAT+TGG + chr2_1:69360113-69360132 None:intergenic 20.0%
!!! GATAAAATAAATTTTGGGTT+AGG - chr2_1:69360184-69360203 Msa0220840:exon 20.0%
!!! TAAAATAAATTTTGGGTTAG+GGG - chr2_1:69360186-69360205 Msa0220840:exon 20.0%
!!! AATTTTGATGATGAAGATGA+AGG + chr2_1:69354414-69354433 None:intergenic 25.0%
!! AATTCAGCTATTTCAGTATA+AGG + chr2_1:69354747-69354766 None:intergenic 25.0%
! AATAGCTGAATTGAAGAATT+TGG - chr2_1:69354755-69354774 Msa0220840:intron 25.0%
! ATAGCTGAATTGAAGAATTT+GGG - chr2_1:69354756-69354775 Msa0220840:intron 25.0%
! TTTCTATCACTTTCAACATT+TGG + chr2_1:69354885-69354904 None:intergenic 25.0%
!! GAAAGTGATAGAAAATTTTG+GGG - chr2_1:69354891-69354910 Msa0220840:intron 25.0%
!!! ATAGAAAATTTTGGGGTTTA+TGG - chr2_1:69354898-69354917 Msa0220840:intron 25.0%
!!! TAGAAAATTTTGGGGTTTAT+GGG - chr2_1:69354899-69354918 Msa0220840:intron 25.0%
!! GAAAGAGTATAAGGAAAAAA+TGG - chr2_1:69355232-69355251 Msa0220840:CDS 25.0%
!! TCCTTATTTGAAAATGACAA+AGG - chr2_1:69355538-69355557 Msa0220840:intron 25.0%
!!! TCCTTTGTCATTTTCAAATA+AGG + chr2_1:69355542-69355561 None:intergenic 25.0%
! GTTCTAATTATTCTGTCAAA+TGG + chr2_1:69355785-69355804 None:intergenic 25.0%
!! GTTTTCTATATATAGCGTTA+TGG - chr2_1:69355859-69355878 Msa0220840:intron 25.0%
! TGACTAAATGAAGATTAAAC+TGG - chr2_1:69355986-69356005 Msa0220840:intron 25.0%
!! AAATATACACACATTTTCTC+TGG + chr2_1:69356186-69356205 None:intergenic 25.0%
!! AAAAAAAAATGAGAGTGCAA+TGG + chr2_1:69356218-69356237 None:intergenic 25.0%
! AGAAGTTAATTAGTGGAAAT+AGG + chr2_1:69356287-69356306 None:intergenic 25.0%
! TGACAAAAGAAGTTAATTAG+TGG + chr2_1:69356294-69356313 None:intergenic 25.0%
! AGCTTGAAACAAATAAAATG+AGG + chr2_1:69356349-69356368 None:intergenic 25.0%
! TTTATTTGTTTCAAGCTGAT+CGG - chr2_1:69356352-69356371 Msa0220840:CDS 25.0%
! GTAGTATGATCAAAAAGATA+GGG + chr2_1:69356380-69356399 None:intergenic 25.0%
!! GCAAACTTTTGTGTAAATTT+TGG - chr2_1:69356632-69356651 Msa0220840:intron 25.0%
! CTTTCTCTTATAATAGAGAT+CGG + chr2_1:69357209-69357228 None:intergenic 25.0%
!!! CTTGATTTTAGAAAACGATA+AGG + chr2_1:69357357-69357376 None:intergenic 25.0%
! TGTATAAATTTCAAACAGAC+TGG + chr2_1:69357601-69357620 None:intergenic 25.0%
! CTAAATCCTATTATGCAAAA+AGG + chr2_1:69357752-69357771 None:intergenic 25.0%
! ATAACACTAATTTCAACACA+TGG - chr2_1:69358081-69358100 Msa0220840:intron 25.0%
! TATTCGATATTGTCGAAATT+AGG + chr2_1:69358280-69358299 None:intergenic 25.0%
! CAATTTATTTCAAATGCATG+TGG + chr2_1:69358313-69358332 None:intergenic 25.0%
! ATCTACAACAAAGCAATAAA+AGG + chr2_1:69358422-69358441 None:intergenic 25.0%
! GAGTCCATAAAATTTAATGA+CGG - chr2_1:69358494-69358513 Msa0220840:CDS 25.0%
!! CATTCCGTCATTAAATTTTA+TGG + chr2_1:69358501-69358520 None:intergenic 25.0%
! TACATATATAATCGAAGACA+CGG + chr2_1:69359224-69359243 None:intergenic 25.0%
! AAAAAATGCAAGTGTAACTT+AGG + chr2_1:69359481-69359500 None:intergenic 25.0%
! ATGTAAAATCCTCTATAACA+TGG - chr2_1:69359602-69359621 Msa0220840:CDS 25.0%
! AATATCATTCATGTGAAACA+AGG + chr2_1:69359829-69359848 None:intergenic 25.0%
! AAAAAATTCCCAAAATTGGT+GGG + chr2_1:69360109-69360128 None:intergenic 25.0%
! TAAAAAATTCCCAAAATTGG+TGG + chr2_1:69360110-69360129 None:intergenic 25.0%
! TTACATACCTTTATAGAGTA+TGG - chr2_1:69360236-69360255 Msa0220840:five_prime_UTR 25.0%
! AAAATGTCCATACTCTATAA+AGG + chr2_1:69360246-69360265 None:intergenic 25.0%
!!! TAGAGTATGGACATTTTTTT+AGG - chr2_1:69360249-69360268 Msa0220840:five_prime_UTR 25.0%
TTGAAGGAATAGTGTACTTT+CGG + chr2_1:69354220-69354239 None:intergenic 30.0%
!! GAAGATTTTAGTGGAATTTG+AGG + chr2_1:69354276-69354295 None:intergenic 30.0%
! GATGAAGATGAAGATTTTAG+TGG + chr2_1:69354285-69354304 None:intergenic 30.0%
TGTTATGTTTGTGAAGCTAT+TGG + chr2_1:69354312-69354331 None:intergenic 30.0%
GAATTTGTGATGAGATTGAA+CGG + chr2_1:69354479-69354498 None:intergenic 30.0%
!! TTTCGTCATTTTCAGATTCT+GGG + chr2_1:69354506-69354525 None:intergenic 30.0%
!! TTTTCGTCATTTTCAGATTC+TGG + chr2_1:69354507-69354526 None:intergenic 30.0%
! TTTTTGGATGAAGCTTTTCT+GGG + chr2_1:69354654-69354673 None:intergenic 30.0%
CTATTAACAAACTCAACCAA+AGG + chr2_1:69355038-69355057 None:intergenic 30.0%
!! CTTTGGTTGAGTTTGTTAAT+AGG - chr2_1:69355036-69355055 Msa0220840:intron 30.0%
AGAATGAAAAGAGAATGAGA+AGG - chr2_1:69355207-69355226 Msa0220840:CDS 30.0%
GGAAAAAATGGTTGAAGTTA+AGG - chr2_1:69355244-69355263 Msa0220840:CDS 30.0%
!!! CGTTTTTTAATGCCACTTTT+TGG - chr2_1:69355273-69355292 Msa0220840:intron 30.0%
AAGGATAAAATGGCGATTAA+TGG - chr2_1:69355308-69355327 Msa0220840:intron 30.0%
AAAATGGCGATTAATGGAAT+TGG - chr2_1:69355314-69355333 Msa0220840:intron 30.0%
AGAAGAAGGATTATGAAGAT+AGG - chr2_1:69355390-69355409 Msa0220840:intron 30.0%
ACAAAGGAGTTTATGAAATC+TGG - chr2_1:69355554-69355573 Msa0220840:intron 30.0%
CAAAGGAGTTTATGAAATCT+GGG - chr2_1:69355555-69355574 Msa0220840:intron 30.0%
AAAGGAGTTTATGAAATCTG+GGG - chr2_1:69355556-69355575 Msa0220840:intron 30.0%
TAAAATACGACTTGAACTTG+AGG - chr2_1:69355667-69355686 Msa0220840:intron 30.0%
! AAATGGTTAGTTAAGAGTTG+AGG + chr2_1:69355768-69355787 None:intergenic 30.0%
ATTAAACTGGTCACTTAATC+AGG - chr2_1:69355999-69356018 Msa0220840:intron 30.0%
CGTAGTATGATCAAAAAGAT+AGG + chr2_1:69356381-69356400 None:intergenic 30.0%
! TTCAGTGTTTTGCATCTAAT+CGG - chr2_1:69356440-69356459 Msa0220840:intron 30.0%
TTACACAAAAGTTTGCCTAT+AGG + chr2_1:69356628-69356647 None:intergenic 30.0%
! TAAAGATTTTCCGATCAAAC+CGG + chr2_1:69356789-69356808 None:intergenic 30.0%
!! CTACCTTTAGAATTTCAATG+CGG + chr2_1:69356834-69356853 None:intergenic 30.0%
!!! TTCAGTTTTGTTTTGTGATC+CGG - chr2_1:69356896-69356915 Msa0220840:intron 30.0%
AGTTGTGGATTTGTGATTAA+TGG - chr2_1:69356930-69356949 Msa0220840:intron 30.0%
!!! TTTTTTCCTGGTTACATGAT+AGG - chr2_1:69356979-69356998 Msa0220840:intron 30.0%
! ATAAATAAAGCACTTCTGGT+CGG + chr2_1:69357404-69357423 None:intergenic 30.0%
! TGCAATAAATAAAGCACTTC+TGG + chr2_1:69357408-69357427 None:intergenic 30.0%
!! CAATGCTTAAAAGTTGATAG+TGG - chr2_1:69357449-69357468 Msa0220840:CDS 30.0%
! GTAAAGCCTTTTCTTATCAT+GGG + chr2_1:69357495-69357514 None:intergenic 30.0%
! AGTAAAGCCTTTTCTTATCA+TGG + chr2_1:69357496-69357515 None:intergenic 30.0%
AAGGCTATCCTATATTCTTA+TGG - chr2_1:69357690-69357709 Msa0220840:intron 30.0%
! AAATGCCCTTTTTGCATAAT+AGG - chr2_1:69357743-69357762 Msa0220840:CDS 30.0%
TAAAAAATGAACCAGTGACT+CGG + chr2_1:69357939-69357958 None:intergenic 30.0%
!!! TTTTTTAGCCTGTACAAAAC+TGG - chr2_1:69357952-69357971 Msa0220840:intron 30.0%
!! TTTTTAGCCTGTACAAAACT+GGG - chr2_1:69357953-69357972 Msa0220840:intron 30.0%
TGCATATACAATCTGATATG+TGG - chr2_1:69358001-69358020 Msa0220840:CDS 30.0%
! TGATTTTCGGTTAAACTAGT+CGG - chr2_1:69358043-69358062 Msa0220840:CDS 30.0%
TCGACAATATCGAATATGTA+TGG - chr2_1:69358284-69358303 Msa0220840:intron 30.0%
GTCAGATGATGAATATTAAG+AGG + chr2_1:69358369-69358388 None:intergenic 30.0%
AGACAAACATTTCATTCAGA+GGG + chr2_1:69358594-69358613 None:intergenic 30.0%
!!! TGTATTTTTAGCATTAGTCG+AGG - chr2_1:69358613-69358632 Msa0220840:intron 30.0%
AACTACTAATATCATGCAGT+CGG - chr2_1:69358744-69358763 Msa0220840:intron 30.0%
!! TGTTAACTAGCTTTGATGAA+TGG - chr2_1:69358967-69358986 Msa0220840:CDS 30.0%
TTTGATGAATGGCAAGAATA+TGG - chr2_1:69358978-69358997 Msa0220840:CDS 30.0%
! GCAAGAATATGGTATTTCTA+GGG - chr2_1:69358989-69359008 Msa0220840:CDS 30.0%
AATACAGCATAGTTATGAAC+TGG - chr2_1:69359080-69359099 Msa0220840:CDS 30.0%
TATTTCAGTTGAGTACGATA+TGG - chr2_1:69359291-69359310 Msa0220840:CDS 30.0%
ATTTCAGTTGAGTACGATAT+GGG - chr2_1:69359292-69359311 Msa0220840:CDS 30.0%
!!! TTTTTTCGAGATATACTGCA+AGG + chr2_1:69359550-69359569 None:intergenic 30.0%
TTAAACTAATGTAGACCCAT+AGG - chr2_1:69359574-69359593 Msa0220840:CDS 30.0%
! GATTTTACATTGTCTCCTAT+GGG + chr2_1:69359592-69359611 None:intergenic 30.0%
AAACATTGCATTGTATTGTC+AGG - chr2_1:69359668-69359687 Msa0220840:CDS 30.0%
GTATTGTCAGGAAATTGATT+TGG - chr2_1:69359680-69359699 Msa0220840:CDS 30.0%
ATATAGTTCAGTTTCAGTGA+AGG - chr2_1:69359758-69359777 Msa0220840:CDS 30.0%
! TAAAACACTGATGGATACAT+TGG - chr2_1:69359903-69359922 Msa0220840:CDS 30.0%
AACAATGTCTTCTTTGGTTA+AGG + chr2_1:69359953-69359972 None:intergenic 30.0%
TATTAGCGTACTTGACATAA+GGG - chr2_1:69360011-69360030 Msa0220840:CDS 30.0%
TTCTTGTAGTTCTTTACGTT+TGG + chr2_1:69360040-69360059 None:intergenic 30.0%
CTACAAGAAATAGCTAGTAA+TGG - chr2_1:69360051-69360070 Msa0220840:CDS 30.0%
! AGAAATAGCTAGTAATGGAA+AGG - chr2_1:69360056-69360075 Msa0220840:CDS 30.0%
AAGGAAATAGACGAATCATA+AGG - chr2_1:69360075-69360094 Msa0220840:CDS 30.0%
AGGAAATAGACGAATCATAA+GGG - chr2_1:69360076-69360095 Msa0220840:CDS 30.0%
AAAAATTCCCAAAATTGGTG+GGG + chr2_1:69360108-69360127 None:intergenic 30.0%
ATGAAGGTGGAAAATGAACA+AGG + chr2_1:69354398-69354417 None:intergenic 35.0%
!! TTTGATGATGAAGATGAAGG+TGG + chr2_1:69354411-69354430 None:intergenic 35.0%
TGATGAGATTGAACGGAATT+TGG + chr2_1:69354472-69354491 None:intergenic 35.0%
!! TTCGTCATTTTCAGATTCTG+GGG + chr2_1:69354505-69354524 None:intergenic 35.0%
! CTTTTTGGATGAAGCTTTTC+TGG + chr2_1:69354655-69354674 None:intergenic 35.0%
CAGAAAAGCTTCATCCAAAA+AGG - chr2_1:69354653-69354672 Msa0220840:CDS 35.0%
! TGACAAAGCTTCAACCTTTT+TGG + chr2_1:69354670-69354689 None:intergenic 35.0%
!!! TGTTGCAGTATTGGTTGTTT+TGG - chr2_1:69354830-69354849 Msa0220840:CDS 35.0%
!! TCCTTCTTCGACTTTTTCTT+CGG + chr2_1:69355068-69355087 None:intergenic 35.0%
ATGAAAAGAGAATGAGAAGG+AGG - chr2_1:69355210-69355229 Msa0220840:CDS 35.0%
AGTGGCATTAAAAAACGCAT+TGG + chr2_1:69355270-69355289 None:intergenic 35.0%
TAGCTATAAGAAGCAGAAGA+AGG - chr2_1:69355376-69355395 Msa0220840:intron 35.0%
TAAGATTCAGAAAGCTGATG+CGG - chr2_1:69355415-69355434 Msa0220840:intron 35.0%
! TTCGAAGAGCACAAAATAGA+AGG - chr2_1:69355585-69355604 Msa0220840:intron 35.0%
ATTGTCAAGTTCTTCACTCA+TGG - chr2_1:69355692-69355711 Msa0220840:intron 35.0%
TTAGAACTGCTTTAGCCTAA+AGG - chr2_1:69355798-69355817 Msa0220840:intron 35.0%
CAGTTTGTCGAAATATACGT+TGG - chr2_1:69356122-69356141 Msa0220840:intron 35.0%
! TCGAAATATACGTTGGTGTT+GGG - chr2_1:69356129-69356148 Msa0220840:intron 35.0%
AACACTGAAGCTTAAGAAGT+AGG + chr2_1:69356429-69356448 None:intergenic 35.0%
TCATCAATGAAGACAACAGA+AGG + chr2_1:69356494-69356513 None:intergenic 35.0%
TTTGCCTATAGGAAGCAATT+GGG + chr2_1:69356617-69356636 None:intergenic 35.0%
!! TTTTGGTTGATGTTTCCTGT+TGG - chr2_1:69356649-69356668 Msa0220840:intron 35.0%
! TTAGATGGATTTGAAGGAAG+AGG - chr2_1:69356697-69356716 Msa0220840:intron 35.0%
! TAGATGGATTTGAAGGAAGA+GGG - chr2_1:69356698-69356717 Msa0220840:intron 35.0%
AAAATCTTTATCCCCAAACC+CGG - chr2_1:69356799-69356818 Msa0220840:intron 35.0%
CCACAACTAACAATACTTTC+CGG + chr2_1:69356918-69356937 None:intergenic 35.0%
TAGTCTACATCTTCAGCAAT+TGG + chr2_1:69357022-69357041 None:intergenic 35.0%
AAGACAATGACTGTACATCA+CGG + chr2_1:69357154-69357173 None:intergenic 35.0%
! CTTTCTCTTATAATGGAGAC+CGG - chr2_1:69357320-69357339 Msa0220840:intron 35.0%
TATGGTCCCATGATAAGAAA+AGG - chr2_1:69357486-69357505 Msa0220840:CDS 35.0%
TGAGTGTGCCATAAGAATAT+AGG + chr2_1:69357701-69357720 None:intergenic 35.0%
! AATAGGATTTAGCTCGCAAA+TGG - chr2_1:69357760-69357779 Msa0220840:CDS 35.0%
TGCTATGCACATGAATTCAA+TGG + chr2_1:69357786-69357805 None:intergenic 35.0%
! CTCGGTTTTCAAATTTTTCG+TGG + chr2_1:69357921-69357940 None:intergenic 35.0%
AAATTTGAAAACCGAGTCAC+TGG - chr2_1:69357925-69357944 Msa0220840:intron 35.0%
ATACAATCTGATATGTGGAC+TGG - chr2_1:69358006-69358025 Msa0220840:CDS 35.0%
TAGTGTTATAAAACGCAGAC+TGG + chr2_1:69358070-69358089 None:intergenic 35.0%
TAATTTCAACACATGGTAGC+TGG - chr2_1:69358088-69358107 Msa0220840:intron 35.0%
AGCAGCTTGTAATAAGTCAT+CGG + chr2_1:69358152-69358171 None:intergenic 35.0%
CTTATTACAAGCTGCTCAAA+TGG - chr2_1:69358156-69358175 Msa0220840:intron 35.0%
AGCTATAAATGAAGCAGCAA+TGG - chr2_1:69358234-69358253 Msa0220840:intron 35.0%
! ATTCATCATCTGACTGCTTT+TGG - chr2_1:69358375-69358394 Msa0220840:intron 35.0%
CAGACAAACATTTCATTCAG+AGG + chr2_1:69358595-69358614 None:intergenic 35.0%
TATGTTCTGCAACTGTATTC+AGG + chr2_1:69358892-69358911 None:intergenic 35.0%
GGCAAGAATATGGTATTTCT+AGG - chr2_1:69358988-69359007 Msa0220840:CDS 35.0%
TGAAACTGCAGATAATGCTA+GGG - chr2_1:69359316-69359335 Msa0220840:CDS 35.0%
GCAGCAAGAATGTATATGAT+TGG - chr2_1:69359341-69359360 Msa0220840:CDS 35.0%
GCAAGAATGTATATGATTGG+CGG - chr2_1:69359344-69359363 Msa0220840:CDS 35.0%
CAAGAATGTATATGATTGGC+GGG - chr2_1:69359345-69359364 Msa0220840:CDS 35.0%
ACAGAGCACGTACATTAATT+CGG + chr2_1:69359415-69359434 None:intergenic 35.0%
! CTTGTTTCTTGTTTCAGCTT+CGG - chr2_1:69359455-69359474 Msa0220840:CDS 35.0%
! GGATTTTACATTGTCTCCTA+TGG + chr2_1:69359593-69359612 None:intergenic 35.0%
TTTGTCTCTCCATGTTATAG+AGG + chr2_1:69359614-69359633 None:intergenic 35.0%
!!! TCAGTGTTTTATTTTGCTGC+AGG + chr2_1:69359894-69359913 None:intergenic 35.0%
GCAGCAAAATAAAACACTGA+TGG - chr2_1:69359894-69359913 Msa0220840:CDS 35.0%
AAGACGAACAATGTCTTCTT+TGG + chr2_1:69359959-69359978 None:intergenic 35.0%
!!! TAATAGGAATTGGTTTTGCG+TGG + chr2_1:69359996-69360015 None:intergenic 35.0%
TCAAGTACGCTAATAGGAAT+TGG + chr2_1:69360006-69360025 None:intergenic 35.0%
CTTATGTCAAGTACGCTAAT+AGG + chr2_1:69360012-69360031 None:intergenic 35.0%
CTATTAGCGTACTTGACATA+AGG - chr2_1:69360010-69360029 Msa0220840:CDS 35.0%
!!! ATAAATTTTGGGTTAGGGGA+TGG - chr2_1:69360190-69360209 Msa0220840:five_prime_UTR 35.0%
AAGGAATAGTGTACTTTCGG+TGG + chr2_1:69354217-69354236 None:intergenic 40.0%
GTGAAGTAGTTCACAGTTGA+AGG + chr2_1:69354236-69354255 None:intergenic 40.0%
! AACGGAATTTGGAGGGTTTT+GGG + chr2_1:69354461-69354480 None:intergenic 40.0%
GAGATTGAACGGAATTTGGA+GGG + chr2_1:69354468-69354487 None:intergenic 40.0%
TGAGATTGAACGGAATTTGG+AGG + chr2_1:69354469-69354488 None:intergenic 40.0%
! GGTTGAAGCTTTGTCAATAG+AGG - chr2_1:69354674-69354693 Msa0220840:intron 40.0%
! TGAAGCTTTGTCAATAGAGG+AGG - chr2_1:69354677-69354696 Msa0220840:intron 40.0%
CAATAGAGGAGGTGAAATCA+TGG - chr2_1:69354688-69354707 Msa0220840:intron 40.0%
! GAGGTGAAATCATGGATTGA+AGG - chr2_1:69354696-69354715 Msa0220840:intron 40.0%
!! GGTATGCGTTCTGAAACAAT+GGG + chr2_1:69354726-69354745 None:intergenic 40.0%
!! AGGTATGCGTTCTGAAACAA+TGG + chr2_1:69354727-69354746 None:intergenic 40.0%
!!! TGCAGTATTGGTTGTTTTGG+AGG - chr2_1:69354833-69354852 Msa0220840:CDS 40.0%
TGCATATTCACCACCTGTTA+AGG - chr2_1:69354953-69354972 Msa0220840:intron 40.0%
!! TTTCGGTATTGGCAAGGATT+TGG - chr2_1:69354991-69355010 Msa0220840:intron 40.0%
TCAACCAAAGGCTTGTGAAA+TGG + chr2_1:69355026-69355045 None:intergenic 40.0%
GAAAAAGTCGAAGAAGGAGT+TGG - chr2_1:69355070-69355089 Msa0220840:intron 40.0%
AGAAGTGGTGAAGAAGATGA+AGG - chr2_1:69355136-69355155 Msa0220840:intron 40.0%
AGATGATTGAGAGGAATGAG+AGG - chr2_1:69355165-69355184 Msa0220840:CDS 40.0%
GAGGAATAAGAAGAGAGAAG+CGG - chr2_1:69355184-69355203 Msa0220840:CDS 40.0%
! GAGAAGGAGGAAAGAGTATA+AGG - chr2_1:69355223-69355242 Msa0220840:CDS 40.0%
TCGTATGGCGAAGGATAAAA+TGG - chr2_1:69355298-69355317 Msa0220840:intron 40.0%
!!! CGTGATTTTTTACAGGACTG+TGG - chr2_1:69355349-69355368 Msa0220840:intron 40.0%
!!! GATTTTTTACAGGACTGTGG+TGG - chr2_1:69355352-69355371 Msa0220840:intron 40.0%
! AGTTTATGAAATCTGGGGCA+CGG - chr2_1:69355561-69355580 Msa0220840:intron 40.0%
GTGAAGTTTACTGATGTTGC+TGG - chr2_1:69355638-69355657 Msa0220840:intron 40.0%
! TTTACTGATGTTGCTGGTCT+CGG - chr2_1:69355644-69355663 Msa0220840:intron 40.0%
AGGTAAATGAAGTGAGACCT+GGG + chr2_1:69355748-69355767 None:intergenic 40.0%
AAACTGGTCACTTAATCAGG+TGG - chr2_1:69356002-69356021 Msa0220840:intron 40.0%
GTCGAAATATACGTTGGTGT+TGG - chr2_1:69356128-69356147 Msa0220840:intron 40.0%
!! CGAAATATACGTTGGTGTTG+GGG - chr2_1:69356130-69356149 Msa0220840:intron 40.0%
!! ACACATTTTCTCTGGCTTCT+TGG + chr2_1:69356178-69356197 None:intergenic 40.0%
TGTTGTCTTCATTGATGAGC+TGG - chr2_1:69356496-69356515 Msa0220840:intron 40.0%
ACGTGATGCTACTCTTAATC+AGG - chr2_1:69356568-69356587 Msa0220840:intron 40.0%
ACTTCCCAATTGCTTCCTAT+AGG - chr2_1:69356610-69356629 Msa0220840:intron 40.0%
GTTTGCCTATAGGAAGCAAT+TGG + chr2_1:69356618-69356637 None:intergenic 40.0%
! GTGTGCTTAGATGGATTTGA+AGG - chr2_1:69356691-69356710 Msa0220840:intron 40.0%
! AGATGGATTTGAAGGAAGAG+GGG - chr2_1:69356699-69356718 Msa0220840:intron 40.0%
TGGCCGCATTGAAATTCTAA+AGG - chr2_1:69356828-69356847 Msa0220840:intron 40.0%
!! CCGGAAAGTATTGTTAGTTG+TGG - chr2_1:69356915-69356934 Msa0220840:intron 40.0%
!!! CAATTGGCTTTTTACGAGCA+TGG + chr2_1:69357006-69357025 None:intergenic 40.0%
ATTGTTGCCAGTATGACTGA+TGG - chr2_1:69357046-69357065 Msa0220840:intron 40.0%
AACCATTCCATCAGTCATAC+TGG + chr2_1:69357056-69357075 None:intergenic 40.0%
AGTATGACTGATGGAATGGT+TGG - chr2_1:69357055-69357074 Msa0220840:intron 40.0%
TCAATATGATGCGAGACTCA+AGG - chr2_1:69357113-69357132 Msa0220840:intron 40.0%
! ATTTTCCGAGATCAAACCAC+AGG + chr2_1:69357727-69357746 None:intergenic 40.0%
CTGTCTCATTCTCATATGCA+AGG + chr2_1:69357827-69357846 None:intergenic 40.0%
!! CCATTAACCCAGTTTTGTAC+AGG + chr2_1:69357963-69357982 None:intergenic 40.0%
CCTGTACAAAACTGGGTTAA+TGG - chr2_1:69357960-69357979 Msa0220840:intron 40.0%
ATTCTGGGTTATACTGTTGC+AGG - chr2_1:69358120-69358139 Msa0220840:intron 40.0%
AGCTTGTAATAAGTCATCGG+TGG + chr2_1:69358149-69358168 None:intergenic 40.0%
GTAGGGAATTGGGATATGTT+CGG - chr2_1:69358462-69358481 Msa0220840:CDS 40.0%
GTCGAGGATAATGTTTGCAA+AGG - chr2_1:69358629-69358648 Msa0220840:intron 40.0%
CAGCTGATGAAATGTGGTTT+GGG - chr2_1:69358810-69358829 Msa0220840:intron 40.0%
! AATGTGGTTTGGGAAAGATC+AGG - chr2_1:69358820-69358839 Msa0220840:intron 40.0%
TGTATTCAGGAACTACAGTC+GGG + chr2_1:69358879-69358898 None:intergenic 40.0%
CTGTATTCAGGAACTACAGT+CGG + chr2_1:69358880-69358899 None:intergenic 40.0%
TGGGATTGCAATTACATGTC+TGG - chr2_1:69359032-69359051 Msa0220840:CDS 40.0%
GGGATTGCAATTACATGTCT+GGG - chr2_1:69359033-69359052 Msa0220840:CDS 40.0%
AACTTAGAAAGCCATTCCTC+TGG + chr2_1:69359106-69359125 None:intergenic 40.0%
CTGAAACTGCAGATAATGCT+AGG - chr2_1:69359315-69359334 Msa0220840:CDS 40.0%
!! ACTGCAAGGAGTTCTAGTTT+CGG + chr2_1:69359536-69359555 None:intergenic 40.0%
!! ACTTGATGACGACTCTTGAT+TGG - chr2_1:69359789-69359808 Msa0220840:CDS 40.0%
GTTCGTCTTGTACAATTGCA+TGG - chr2_1:69359970-69359989 Msa0220840:CDS 40.0%
! TCTTCTGCATTTGTTGACCA+GGG - chr2_1:69360272-69360291 Msa0220840:five_prime_UTR 40.0%
! GAACGGAATTTGGAGGGTTT+TGG + chr2_1:69354462-69354481 None:intergenic 45.0%
CGGTGAGTTTGAGGAAATTG+AGG + chr2_1:69354557-69354576 None:intergenic 45.0%
GGAGATAACAGTGAGGGTTA+CGG + chr2_1:69354577-69354596 None:intergenic 45.0%
TATAGTGAAACCTAGTGCCG+TGG - chr2_1:69354791-69354810 Msa0220840:intron 45.0%
!! ATCTCTGGAACCTTAACAGG+TGG + chr2_1:69354966-69354985 None:intergenic 45.0%
ATCCTTGCCAATACCGAAAG+CGG + chr2_1:69354990-69355009 None:intergenic 45.0%
! TCTGCCATTTCACAAGCCTT+TGG - chr2_1:69355019-69355038 Msa0220840:intron 45.0%
GCCGAAGAAAAAGTCGAAGA+AGG - chr2_1:69355064-69355083 Msa0220840:intron 45.0%
GAAGAAGGAGTTGGAGTTGA+GGG - chr2_1:69355079-69355098 Msa0220840:intron 45.0%
GAGGCAGAAGAAAGAAGAAG+TGG - chr2_1:69355121-69355140 Msa0220840:intron 45.0%
TGGTGAAGAAGATGAAGGAG+AGG - chr2_1:69355141-69355160 Msa0220840:intron 45.0%
GGTGAAGAAGATGAAGGAGA+GGG - chr2_1:69355142-69355161 Msa0220840:intron 45.0%
!!! TGCCACTTTTTGGACTCGTA+TGG - chr2_1:69355283-69355302 Msa0220840:intron 45.0%
! TTTTTGGACTCGTATGGCGA+AGG - chr2_1:69355289-69355308 Msa0220840:intron 45.0%
GGAAGAGAGAAGGAAGATGA+AGG - chr2_1:69355436-69355455 Msa0220840:intron 45.0%
GAGAAGGAAGATGAAGGAGA+TGG - chr2_1:69355442-69355461 Msa0220840:intron 45.0%
! GTTTATGAAATCTGGGGCAC+GGG - chr2_1:69355562-69355581 Msa0220840:intron 45.0%
CTTCCTCAGTATCTTGAGAG+AGG - chr2_1:69355608-69355627 Msa0220840:intron 45.0%
ACACCTCTCTCAAGATACTG+AGG + chr2_1:69355614-69355633 None:intergenic 45.0%
TCAGTATCTTGAGAGAGGTG+TGG - chr2_1:69355613-69355632 Msa0220840:intron 45.0%
! GGATTTTCACTCCTCTCCTT+CGG + chr2_1:69355727-69355746 None:intergenic 45.0%
GAGGTAAATGAAGTGAGACC+TGG + chr2_1:69355749-69355768 None:intergenic 45.0%
TCAGGTGGCATACTTCTTTG+TGG - chr2_1:69356017-69356036 Msa0220840:intron 45.0%
ATTGATGAGCTGGATGCTGT+AGG - chr2_1:69356506-69356525 Msa0220840:intron 45.0%
! AGGAAGCGTGGCTTGATTAA+AGG - chr2_1:69356530-69356549 Msa0220840:intron 45.0%
CGTGGCTTGATTAAAGGTTC+AGG - chr2_1:69356536-69356555 Msa0220840:intron 45.0%
GGCTTGATTAAAGGTTCAGG+TGG - chr2_1:69356539-69356558 Msa0220840:intron 45.0%
GATTAAAGGTTCAGGTGGAC+AGG - chr2_1:69356544-69356563 Msa0220840:intron 45.0%
CAAATCCATCTAAGCACACC+AGG + chr2_1:69356690-69356709 None:intergenic 45.0%
!! AATGTCTGGTCGATTTGTGG+AGG + chr2_1:69356740-69356759 None:intergenic 45.0%
!! CAGAATGTCTGGTCGATTTG+TGG + chr2_1:69356743-69356762 None:intergenic 45.0%
CACAAATCGACCAGACATTC+TGG - chr2_1:69356741-69356760 Msa0220840:intron 45.0%
TTCAATGCGGCCAATGAAAC+CGG + chr2_1:69356821-69356840 None:intergenic 45.0%
CATGGACCTATCATGTAACC+AGG + chr2_1:69356988-69357007 None:intergenic 45.0%
TGCCAGTATGACTGATGGAA+TGG - chr2_1:69357051-69357070 Msa0220840:intron 45.0%
AGCAGCAACCTCAACTATGT+TGG + chr2_1:69357092-69357111 None:intergenic 45.0%
! TCTCTTATAATGGAGACCGG+AGG - chr2_1:69357323-69357342 Msa0220840:intron 45.0%
! CTCTTATAATGGAGACCGGA+GGG - chr2_1:69357324-69357343 Msa0220840:intron 45.0%
CGATAAGGCAATATTCCCTC+CGG + chr2_1:69357342-69357361 None:intergenic 45.0%
GTGGATGTCAGCAGTTTCTA+TGG - chr2_1:69357468-69357487 Msa0220840:CDS 45.0%
! CAGTCGATGACTGGTCAAAT+CGG - chr2_1:69357550-69357569 Msa0220840:CDS 45.0%
CAACCTACTCAAAACCCATC+TGG - chr2_1:69357658-69357677 Msa0220840:intron 45.0%
CATTGCCTGTGGTTTGATCT+CGG - chr2_1:69357719-69357738 Msa0220840:intron 45.0%
!! ATCTGATATGTGGACTGGAC+CGG - chr2_1:69358011-69358030 Msa0220840:CDS 45.0%
CCGAAAATCAGACCCATAAC+CGG + chr2_1:69358033-69358052 None:intergenic 45.0%
! CCGGTTATGGGTCTGATTTT+CGG - chr2_1:69358030-69358049 Msa0220840:CDS 45.0%
TAGCTGGCAGTTCTTCATTC+TGG - chr2_1:69358104-69358123 Msa0220840:intron 45.0%
AGCTGGCAGTTCTTCATTCT+GGG - chr2_1:69358105-69358124 Msa0220840:intron 45.0%
AGGAGCGAAGCAAAGAGAAA+TGG - chr2_1:69358203-69358222 Msa0220840:intron 45.0%
GGAGCGAAGCAAAGAGAAAT+GGG - chr2_1:69358204-69358223 Msa0220840:intron 45.0%
!! TCATCTGACTGCTTTTGGCA+AGG - chr2_1:69358380-69358399 Msa0220840:CDS 45.0%
ATCACAATTGCTCCTAGAGC+TGG - chr2_1:69358440-69358459 Msa0220840:CDS 45.0%
AATTGCTCCTAGAGCTGGTA+GGG - chr2_1:69358445-69358464 Msa0220840:CDS 45.0%
! AATGACGGAATGCTCACGTA+TGG - chr2_1:69358509-69358528 Msa0220840:CDS 45.0%
ACCACATTTCATCAGCTGCA+CGG + chr2_1:69358808-69358827 None:intergenic 45.0%
GCAGCTGATGAAATGTGGTT+TGG - chr2_1:69358809-69358828 Msa0220840:intron 45.0%
CATAGTTATGAACTGGCCAG+AGG - chr2_1:69359087-69359106 Msa0220840:CDS 45.0%
TTATGAACTGGCCAGAGGAA+TGG - chr2_1:69359092-69359111 Msa0220840:CDS 45.0%
! GGGCTTTCTGATAAGTATCG+CGG - chr2_1:69359365-69359384 Msa0220840:CDS 45.0%
! ATCGCGGAGTATCCAATTTC+TGG - chr2_1:69359381-69359400 Msa0220840:CDS 45.0%
! TCGCGGAGTATCCAATTTCT+GGG - chr2_1:69359382-69359401 Msa0220840:CDS 45.0%
TCGGTCTGTAACCCAGAAAT+TGG + chr2_1:69359396-69359415 None:intergenic 45.0%
! CTTTTGCGCGTACATAGCAA+AGG + chr2_1:69359725-69359744 None:intergenic 45.0%
TTGCTATGTACGCGCAAAAG+AGG - chr2_1:69359725-69359744 Msa0220840:CDS 45.0%
! GTCTTCTGCATTTGTTGACC+AGG - chr2_1:69360271-69360290 Msa0220840:five_prime_UTR 45.0%
! TGCATTTGTTGACCAGGGAA+GGG - chr2_1:69360277-69360296 Msa0220840:five_prime_UTR 45.0%
!!! TTTTTTTATGAATTTTTTTA+TGG - chr2_1:69355826-69355845 Msa0220840:intron 5.0%
!!! TTTTTTATGAATTTTTTTAT+GGG - chr2_1:69355827-69355846 Msa0220840:intron 5.0%
TGAGGGTTACGGTGAGTTTG+AGG + chr2_1:69354566-69354585 None:intergenic 50.0%
TGCAGCGGAGATAACAGTGA+GGG + chr2_1:69354583-69354602 None:intergenic 50.0%
AACCTAGTGCCGTGGAATTG+AGG - chr2_1:69354799-69354818 Msa0220840:intron 50.0%
ACCTAGTGCCGTGGAATTGA+GGG - chr2_1:69354800-69354819 Msa0220840:intron 50.0%
AGCACGTTCCCTCAATTCCA+CGG + chr2_1:69354811-69354830 None:intergenic 50.0%
! GGAACGTGCTGTTGCAGTAT+TGG - chr2_1:69354821-69354840 Msa0220840:intron 50.0%
!! GGCATCTCTGGAACCTTAAC+AGG + chr2_1:69354969-69354988 None:intergenic 50.0%
AATACCGAAAGCGGCATCTC+TGG + chr2_1:69354981-69355000 None:intergenic 50.0%
!! AGAGATGCCGCTTTCGGTAT+TGG - chr2_1:69354980-69354999 Msa0220840:intron 50.0%
CGAAGAAGGAGTTGGAGTTG+AGG - chr2_1:69355078-69355097 Msa0220840:intron 50.0%
AGTTGGAGTTGAGGGAAGCT+AGG - chr2_1:69355087-69355106 Msa0220840:intron 50.0%
AGTTGAGGGAAGCTAGGATG+CGG - chr2_1:69355093-69355112 Msa0220840:intron 50.0%
AGGAGAGGGAGATGATTGAG+AGG - chr2_1:69355156-69355175 Msa0220840:CDS 50.0%
CGCCATACGAGTCCAAAAAG+TGG + chr2_1:69355288-69355307 None:intergenic 50.0%
AAGCTGATGCGGAAGAGAGA+AGG - chr2_1:69355426-69355445 Msa0220840:intron 50.0%
AAGGAGATGGAAGCCGAGAT+GGG - chr2_1:69355455-69355474 Msa0220840:intron 50.0%
TGATGAGGATGAGAGTGAGC+TGG - chr2_1:69355496-69355515 Msa0220840:intron 50.0%
GAGAGTGAGCTGGTGAAAGA+AGG - chr2_1:69355506-69355525 Msa0220840:intron 50.0%
TGAGCTGGTGAAAGAAGGAG+AGG - chr2_1:69355511-69355530 Msa0220840:intron 50.0%
CTCATGGAGAGATGTACCGA+AGG - chr2_1:69355708-69355727 Msa0220840:intron 50.0%
AGGAGAGGAGTGAAAATCCC+AGG - chr2_1:69355728-69355747 Msa0220840:intron 50.0%
AATGTCTTTCCCACTCCAGG+GGG + chr2_1:69356044-69356063 None:intergenic 50.0%
CAATGTCTTTCCCACTCCAG+GGG + chr2_1:69356045-69356064 None:intergenic 50.0%
GCAATGTCTTTCCCACTCCA+GGG + chr2_1:69356046-69356065 None:intergenic 50.0%
AGCAATGTCTTTCCCACTCC+AGG + chr2_1:69356047-69356066 None:intergenic 50.0%
TGGAGTGGGAAAGACATTGC+TGG - chr2_1:69356046-69356065 Msa0220840:CDS 50.0%
GACATTGCTGGCAAAAGCTG+TGG - chr2_1:69356058-69356077 Msa0220840:CDS 50.0%
ATGAGCTGGATGCTGTAGGA+AGG - chr2_1:69356510-69356529 Msa0220840:intron 50.0%
! CAGGTTAGCCATGACACTTC+TGG - chr2_1:69356587-69356606 Msa0220840:intron 50.0%
!! TGGGAAGTCCAGAAGTGTCA+TGG + chr2_1:69356598-69356617 None:intergenic 50.0%
TGGATTTGAAGGAAGAGGGG+AGG - chr2_1:69356702-69356721 Msa0220840:intron 50.0%
! AGTGCTGGATCCAGAATGTC+TGG + chr2_1:69356754-69356773 None:intergenic 50.0%
GATCCAGCACTTGTAAGACC+TGG - chr2_1:69356763-69356782 Msa0220840:intron 50.0%
!! TAAGACCTGGCCGGTTTGAT+CGG - chr2_1:69356776-69356795 Msa0220840:intron 50.0%
! ATTTTCCGATCAAACCGGCC+AGG + chr2_1:69356784-69356803 None:intergenic 50.0%
ATCCCCAAACCCGGTTTCAT+TGG - chr2_1:69356808-69356827 Msa0220840:intron 50.0%
TCAATGCGGCCAATGAAACC+GGG + chr2_1:69356820-69356839 None:intergenic 50.0%
! GACTGATGGAATGGTTGGTG+CGG - chr2_1:69357060-69357079 Msa0220840:intron 50.0%
GGAGCTAGCCAACATAGTTG+AGG - chr2_1:69357081-69357100 Msa0220840:intron 50.0%
! CGATGACTGGTCAAATCGGT+AGG - chr2_1:69357554-69357573 Msa0220840:intron 50.0%
CCTACTCAAAACCCATCTGG+CGG - chr2_1:69357661-69357680 Msa0220840:intron 50.0%
TATGGCACACTCATTGCCTG+TGG - chr2_1:69357708-69357727 Msa0220840:intron 50.0%
TCTCATATGCAAGGCAGCGA+TGG + chr2_1:69357818-69357837 None:intergenic 50.0%
AGCGTGACTGATGTGAGACA+AGG - chr2_1:69357845-69357864 Msa0220840:CDS 50.0%
TGAGACAAGGTGCAGTGACA+AGG - chr2_1:69357858-69357877 Msa0220840:CDS 50.0%
GAGACAAGGTGCAGTGACAA+GGG - chr2_1:69357859-69357878 Msa0220840:CDS 50.0%
AAGGGATAGCATGCAGTCAC+AGG - chr2_1:69357877-69357896 Msa0220840:intron 50.0%
GTCACAGGTAGACACAGTGA+TGG - chr2_1:69357892-69357911 Msa0220840:intron 50.0%
!! TATGTGGACTGGACCGGTTA+TGG - chr2_1:69358017-69358036 Msa0220840:CDS 50.0%
!! ATGTGGACTGGACCGGTTAT+GGG - chr2_1:69358018-69358037 Msa0220840:CDS 50.0%
GCTGCTCAAATGGAAGAGAG+AGG - chr2_1:69358166-69358185 Msa0220840:intron 50.0%
TGAAGCAGCAATGGCTGTTG+CGG - chr2_1:69358243-69358262 Msa0220840:intron 50.0%
CAATTGCTCCTAGAGCTGGT+AGG - chr2_1:69358444-69358463 Msa0220840:CDS 50.0%
TCCTAGAGCTGGTAGGGAAT+TGG - chr2_1:69358451-69358470 Msa0220840:CDS 50.0%
CCTAGAGCTGGTAGGGAATT+GGG - chr2_1:69358452-69358471 Msa0220840:CDS 50.0%
CACATTTCATCAGCTGCACG+GGG + chr2_1:69358806-69358825 None:intergenic 50.0%
CCACATTTCATCAGCTGCAC+GGG + chr2_1:69358807-69358826 None:intergenic 50.0%
! GCAAGTGCCCCACCAATTTT+GGG - chr2_1:69360098-69360117 Msa0220840:CDS 50.0%
! CTGCATTTGTTGACCAGGGA+AGG - chr2_1:69360276-69360295 Msa0220840:five_prime_UTR 50.0%
! ATTTGTTGACCAGGGAAGGG+TGG - chr2_1:69360280-69360299 Msa0220840:five_prime_UTR 50.0%
!! GTGTTATTTCCACCCTTCCC+TGG + chr2_1:69360292-69360311 None:intergenic 50.0%
GTGCAGCGGAGATAACAGTG+AGG + chr2_1:69354584-69354603 None:intergenic 55.0%
!!! TGCTCGCTTTTTTCCAGCGG+CGG + chr2_1:69354631-69354650 None:intergenic 55.0%
!!! GGGTGCTCGCTTTTTTCCAG+CGG + chr2_1:69354634-69354653 None:intergenic 55.0%
TCCCTCAATTCCACGGCACT+AGG + chr2_1:69354804-69354823 None:intergenic 55.0%
!! GGTTCCAGAGATGCCGCTTT+CGG - chr2_1:69354974-69354993 Msa0220840:intron 55.0%
!! TGCCGCTTTCGGTATTGGCA+AGG - chr2_1:69354985-69355004 Msa0220840:intron 55.0%
AAGCTAGGATGCGGTTGCAG+AGG - chr2_1:69355102-69355121 Msa0220840:intron 55.0%
GAAGGAGATGGAAGCCGAGA+TGG - chr2_1:69355454-69355473 Msa0220840:intron 55.0%
AGGAGATGGAAGCCGAGATG+GGG - chr2_1:69355456-69355475 Msa0220840:intron 55.0%
AGCTTCACTCCACCCCATCT+CGG + chr2_1:69355471-69355490 None:intergenic 55.0%
GGAGAGATGTACCGAAGGAG+AGG - chr2_1:69355713-69355732 Msa0220840:intron 55.0%
ATACTTCTTTGTGGCCCCCC+TGG - chr2_1:69356026-69356045 Msa0220840:intron 55.0%
ATGTCTTTCCCACTCCAGGG+GGG + chr2_1:69356043-69356062 None:intergenic 55.0%
TTGCTGGCAAAAGCTGTGGC+TGG - chr2_1:69356062-69356081 Msa0220840:CDS 55.0%
AAAGCTGTGGCTGGTGAAGC+AGG - chr2_1:69356071-69356090 Msa0220840:CDS 55.0%
GATGCTGTAGGAAGGAAGCG+TGG - chr2_1:69356518-69356537 Msa0220840:intron 55.0%
! AGCTGGAGCATTCAGCCAAC+AGG + chr2_1:69356667-69356686 None:intergenic 55.0%
CATCTAAGCACACCAGGAGC+TGG + chr2_1:69356684-69356703 None:intergenic 55.0%
CAGCTCCTGGTGTGCTTAGA+TGG - chr2_1:69356682-69356701 Msa0220840:intron 55.0%
CAGCACTTGTAAGACCTGGC+CGG - chr2_1:69356767-69356786 Msa0220840:intron 55.0%
GGCCAATGAAACCGGGTTTG+GGG + chr2_1:69356813-69356832 None:intergenic 55.0%
CGGCCAATGAAACCGGGTTT+GGG + chr2_1:69356814-69356833 None:intergenic 55.0%
GATGCGAGACTCAAGGACTG+AGG - chr2_1:69357120-69357139 Msa0220840:intron 55.0%
TAACCGGGTCAGTCGATGAC+TGG - chr2_1:69357541-69357560 Msa0220840:CDS 55.0%
! TGACCAGTCATCGACTGACC+CGG + chr2_1:69357547-69357566 None:intergenic 55.0%
!!! CCGCCAGATGGGTTTTGAGT+AGG + chr2_1:69357664-69357683 None:intergenic 55.0%
TCAAAACCCATCTGGCGGAG+TGG - chr2_1:69357666-69357685 Msa0220840:intron 55.0%
CCCAATTCCCTACCAGCTCT+AGG + chr2_1:69358455-69358474 None:intergenic 55.0%
GGGATATGTTCGGACGATGC+TGG - chr2_1:69358472-69358491 Msa0220840:CDS 55.0%
CCCGTGCAGCTGATGAAATG+TGG - chr2_1:69358804-69358823 Msa0220840:intron 55.0%
! GGCAAGTGCCCCACCAATTT+TGG - chr2_1:69360097-69360116 Msa0220840:CDS 55.0%
!!! CTTTTTTCCAGCGGCGGCGA+CGG + chr2_1:69354625-69354644 None:intergenic 60.0%
AGATGGAAGCCGAGATGGGG+TGG - chr2_1:69355459-69355478 Msa0220840:intron 60.0%
GAGATGGGGTGGAGTGAAGC+TGG - chr2_1:69355470-69355489 Msa0220840:intron 60.0%
ATGGGGTGGAGTGAAGCTGG+CGG - chr2_1:69355473-69355492 Msa0220840:intron 60.0%
GAGTGAAGCTGGCGGTGATG+AGG - chr2_1:69355481-69355500 Msa0220840:intron 60.0%
TGGCTGAATGCTCCAGCTCC+TGG - chr2_1:69356669-69356688 Msa0220840:intron 60.0%
CGGCCAGGTCTTACAAGTGC+TGG + chr2_1:69356769-69356788 None:intergenic 60.0%
GCGGCCAATGAAACCGGGTT+TGG + chr2_1:69356815-69356834 None:intergenic 60.0%
TCTTTGTGGCCCCCCTGGAG+TGG - chr2_1:69356031-69356050 Msa0220840:intron 65.0%
CTTTGTGGCCCCCCTGGAGT+GGG - chr2_1:69356032-69356051 Msa0220840:intron 65.0%
ACCCATCTGGCGGAGTGGCA+AGG - chr2_1:69357671-69357690 Msa0220840:intron 65.0%
GCCTTGCCACTCCGCCAGAT+GGG + chr2_1:69357675-69357694 None:intergenic 65.0%
AGCCTTGCCACTCCGCCAGA+TGG + chr2_1:69357676-69357695 None:intergenic 65.0%
!! GGCGGGTTGCGGAAGTGCAG+CGG + chr2_1:69354598-69354617 None:intergenic 70.0%
!! GCGACGGCAGTGGCGGGTTG+CGG + chr2_1:69354609-69354628 None:intergenic 75.0%
! AGCGGCGGCGACGGCAGTGG+CGG + chr2_1:69354616-69354635 None:intergenic 80.0%
! TCCAGCGGCGGCGACGGCAG+TGG + chr2_1:69354619-69354638 None:intergenic 80.0%
! GCGGCGGCGACGGCAGTGGC+GGG + chr2_1:69354615-69354634 None:intergenic 85.0%
! GCCACTGCCGTCGCCGCCGC+TGG - chr2_1:69354615-69354634 Msa0220840:CDS 85.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 69354200 69360370 69354200 ID=Msa0220840;Name=Msa0220840
chr2_1 mRNA 69354200 69360370 69354200 ID=Msa0220840-mRNA-1;Parent=Msa0220840;Name=Msa0220840-mRNA-1;_AED=0.05;_eAED=0.05;_QI=181|0.9|0.90|1|1|1|11|275|899
chr2_1 exon 69354200 69354681 69354200 ID=Msa0220840-mRNA-1:exon:19650;Parent=Msa0220840-mRNA-1
chr2_1 exon 69354824 69354880 69354824 ID=Msa0220840-mRNA-1:exon:19649;Parent=Msa0220840-mRNA-1
chr2_1 exon 69355149 69355271 69355149 ID=Msa0220840-mRNA-1:exon:19648;Parent=Msa0220840-mRNA-1
chr2_1 exon 69355729 69355807 69355729 ID=Msa0220840-mRNA-1:exon:19647;Parent=Msa0220840-mRNA-1
chr2_1 exon 69356045 69356130 69356045 ID=Msa0220840-mRNA-1:exon:19646;Parent=Msa0220840-mRNA-1
chr2_1 exon 69356231 69356428 69356231 ID=Msa0220840-mRNA-1:exon:19645;Parent=Msa0220840-mRNA-1
chr2_1 exon 69357429 69357569 69357429 ID=Msa0220840-mRNA-1:exon:19644;Parent=Msa0220840-mRNA-1
chr2_1 exon 69357721 69357885 69357721 ID=Msa0220840-mRNA-1:exon:19643;Parent=Msa0220840-mRNA-1
chr2_1 exon 69357981 69358082 69357981 ID=Msa0220840-mRNA-1:exon:19642;Parent=Msa0220840-mRNA-1
chr2_1 exon 69358377 69358549 69358377 ID=Msa0220840-mRNA-1:exon:19641;Parent=Msa0220840-mRNA-1
chr2_1 exon 69358821 69360370 69358821 ID=Msa0220840-mRNA-1:exon:19640;Parent=Msa0220840-mRNA-1
chr2_1 five_prime_UTR 69360190 69360370 69360190 ID=Msa0220840-mRNA-1:five_prime_utr;Parent=Msa0220840-mRNA-1
chr2_1 CDS 69358821 69360189 69358821 ID=Msa0220840-mRNA-1:cds;Parent=Msa0220840-mRNA-1
chr2_1 CDS 69358377 69358549 69358377 ID=Msa0220840-mRNA-1:cds;Parent=Msa0220840-mRNA-1
chr2_1 CDS 69357981 69358082 69357981 ID=Msa0220840-mRNA-1:cds;Parent=Msa0220840-mRNA-1
chr2_1 CDS 69357721 69357885 69357721 ID=Msa0220840-mRNA-1:cds;Parent=Msa0220840-mRNA-1
chr2_1 CDS 69357429 69357569 69357429 ID=Msa0220840-mRNA-1:cds;Parent=Msa0220840-mRNA-1
chr2_1 CDS 69356231 69356428 69356231 ID=Msa0220840-mRNA-1:cds;Parent=Msa0220840-mRNA-1
chr2_1 CDS 69356045 69356130 69356045 ID=Msa0220840-mRNA-1:cds;Parent=Msa0220840-mRNA-1
chr2_1 CDS 69355729 69355807 69355729 ID=Msa0220840-mRNA-1:cds;Parent=Msa0220840-mRNA-1
chr2_1 CDS 69355149 69355271 69355149 ID=Msa0220840-mRNA-1:cds;Parent=Msa0220840-mRNA-1
chr2_1 CDS 69354824 69354880 69354824 ID=Msa0220840-mRNA-1:cds;Parent=Msa0220840-mRNA-1
chr2_1 CDS 69354475 69354681 69354475 ID=Msa0220840-mRNA-1:cds;Parent=Msa0220840-mRNA-1
chr2_1 three_prime_UTR 69354200 69354474 69354200 ID=Msa0220840-mRNA-1:three_prime_utr;Parent=Msa0220840-mRNA-1
Gene Sequence

>Msa0220840

ATGTCTTCACATTGCCTTGTTCATTTTCCACCTTCATCTTCATCATCAAAATTCCTAAACCCAAAATTCAAAAAATTCCCAAAACCCTCCAAATTCCGTTCAATCTCATCACAAATTCAAACCCCAGAATCTGAAAATGACGAAAAAAACCAAAAAAATCTCAACTTTAACAACCTCAATTTCCTCAAACTCACCGTAACCCTCACTGTTATCTCCGCTGCACTTCCGCAACCCGCCACTGCCGTCGCCGCCGCTGGAAAAAAGCGAGCACCCAGAAAAGCTTCATCCAAAAAGGTTGAAGCTTTGTCAATAGAGGAGGTGAAATCATGGATTGAAGGATTACCCATTGTTTCAGAACGCATACCTTATACTGAAATAGCTGAATTGAAGAATTTGGGTATGCTCAAACATATAGTGAAACCTAGTGCCGTGGAATTGAGGGAACGTGCTGTTGCAGTATTGGTTGTTTTGGAGGATTCTAGAGTGTTGAGAACAGTGTTGCCAAATGTTGAAAGTGATAGAAAATTTTGGGGTTTATGGGATGAGTTAAAGATTGAGAATTTCTGTGTGAATGCATATTCACCACCTGTTAAGGTTCCAGAGATGCCGCTTTCGGTATTGGCAAGGATTTGGTTGTCTCTGCCATTTCACAAGCCTTTGGTTGAGTTTGTTAATAGGTTTCAGCCGAAGAAAAAGTCGAAGAAGGAGTTGGAGTTGAGGGAAGCTAGGATGCGGTTGCAGAGGCAGAAGAAAGAAGAAGTGGTGAAGAAGATGAAGGAGAGGGAGATGATTGAGAGGAATGAGAGGAATAAGAAGAGAGAAGCGGAGAATGAAAAGAGAATGAGAAGGAGGAAAGAGTATAAGGAAAAAATGGTTGAAGTTAAGGCCAATGCGTTTTTTAATGCCACTTTTTGGACTCGTATGGCGAAGGATAAAATGGCGATTAATGGAATTGGAGTGCTTTTTTTCGTGATTTTTTACAGGACTGTGGTGGTTAGCTATAAGAAGCAGAAGAAGGATTATGAAGATAGGATTAAGATTCAGAAAGCTGATGCGGAAGAGAGAAGGAAGATGAAGGAGATGGAAGCCGAGATGGGGTGGAGTGAAGCTGGCGGTGATGAGGATGAGAGTGAGCTGGTGAAAGAAGGAGAGGAGAATCCTTATTTGAAAATGACAAAGGAGTTTATGAAATCTGGGGCACGGGTTCGAAGAGCACAAAATAGAAGGCTTCCTCAGTATCTTGAGAGAGGTGTGGATGTGAAGTTTACTGATGTTGCTGGTCTCGGTAAAATACGACTTGAACTTGAGGAGATTGTCAAGTTCTTCACTCATGGAGAGATGTACCGAAGGAGAGGAGTGAAAATCCCAGGTGGCATACTTCTTTGTGGCCCCCCTGGAGTGGGAAAGACATTGCTGGCAAAAGCTGTGGCTGGTGAAGCAGGAGTTAATTTCTTCTCAATTTCTGCTTCACAGTTTGTCGAAATATACGTTGGTGTTGGGGCTTCTCGTGTTCGATCACTTTACCAAGAAGCCAGAGAAAATGCTCCTTCTGTTGTCTTCATTGATGAGCTGGATGCTGTAGGAAGGAAGCGTGGCTTGATTAAAGGTTCAGGTGGACAGGAACGTGATGCTACTCTTAATCAGCTCCTGGTGTGCTTAGATGGATTTGAAGGAAGAGGGGAGGTGATCACTATTGCCTCCACAAATCGACCAGACATTCTGGATCCAGCACTTGTAAGACCTGGCCGGTTTGATCGGAAAATCTTTATCCCCAAACCCGGTTTCATTGGCCGCATTGAAATTCTAAAGGTCCATGCTCGTAAAAAGCCAATTGCTGAAGATGTAGACTATGAAATTGTTGCCAGTATGACTGATGGAATGGTTGGTGCGGAGCTAGCCAACATAGTTGAGGTTGCTGCTATCAATATGATGCGAGACTCAAGGACTGAGGTTACCACCGATGACTTATTACAAGCTGCTCAAATGGAAGAGAGAGGAATGCTAGATAGAAAGGAGCGAAGCAAAGAGAAATGGGAACAAGTAGCTATAAATGAAGCAGCAATGGCTGTTGCGGCTATGAACTTGCCTAATTTCGACAATATCGAATATGTATGGACACCACATGCATTTGAAATAAATTGTTATTGGATCACAATTGCTCCTAGAGCTGGTAGGGAATTGGGATATGTTCGGACGATGCTGGAGTCCATAAAATTTAATGACGGAATGCTCACTCGGCAATCTCTCTTTGATCATATTACTGTTCAACTCGCACCCCGTGCAGCTGATGAAATGTGGTTTGGGAAAGATCAGTTGAGTACGATATGGGCTGAAACTGCAGATAATGCTAGGGTTGCAGCAAGAATGTATATGATTGGCGGGCTTTCTGATAAGTATCGCGGAGTATCCAATTTCTGGGTTACAGACCGAATTAATGAAATTGATTTGGAAGCAATGAAGATTCTCAACCTTTGCTATGTACGCGCAAAAGAGATCCTGCAGCAAAATAAAACACTGATGGATACATTGGTGAATGAACTTGTTGAGAAGAAAACCTTAACCAAAGAAGACATTGTTCGTCTTGTACAATTGCATGGCCACGCAAAACCAATTCCTATTAGCGTACTTGACATAAGGGATGCCAAACGTAAAGAACTACAAGAAATAGCTAGTAATGGAAAGGAAATAGACGAATCATAA
Protein sequence

>Msa0220840

MSSHCLVHFPPSSSSSKFLNPKFKKFPKPSKFRSISSQIQTPESENDEKNQKNLNFNNLNFLKLTVTLTVISAALPQPATAVAAAGKKRAPRKASSKKVEALSIEEVKSWIEGLPIVSERIPYTEIAELKNLGMLKHIVKPSAVELRERAVAVLVVLEDSRVLRTVLPNVESDRKFWGLWDELKIENFCVNAYSPPVKVPEMPLSVLARIWLSLPFHKPLVEFVNRFQPKKKSKKELELREARMRLQRQKKEEVVKKMKEREMIERNERNKKREAENEKRMRRRKEYKEKMVEVKANAFFNATFWTRMAKDKMAINGIGVLFFVIFYRTVVVSYKKQKKDYEDRIKIQKADAEERRKMKEMEAEMGWSEAGGDEDESELVKEGEENPYLKMTKEFMKSGARVRRAQNRRLPQYLERGVDVKFTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEARENAPSVVFIDELDAVGRKRGLIKGSGGQERDATLNQLLVCLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGFIGRIEILKVHARKKPIAEDVDYEIVASMTDGMVGAELANIVEVAAINMMRDSRTEVTTDDLLQAAQMEERGMLDRKERSKEKWEQVAINEAAMAVAAMNLPNFDNIEYVWTPHAFEINCYWITIAPRAGRELGYVRTMLESIKFNDGMLTRQSLFDHITVQLAPRAADEMWFGKDQLSTIWAETADNARVAARMYMIGGLSDKYRGVSNFWVTDRINEIDLEAMKILNLCYVRAKEILQQNKTLMDTLVNELVEKKTLTKEDIVRLVQLHGHAKPIPISVLDIRDAKRKELQEIASNGKEIDES*