AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0843690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0843690 MtrunA17_Chr5g0414351 83.673 637 16 3 1 580 1 606 0.0 1000
Msa0843690 MtrunA17_Chr1g0205881 24.585 301 189 5 200 498 223 487 1.29e-15 80.1
Msa0843690 MtrunA17_Chr1g0205881 25.541 231 147 1 169 374 220 450 5.02e-14 75.1
Msa0843690 MtrunA17_Chr1g0205881 26.923 338 205 9 225 557 187 487 8.21e-14 74.3
Msa0843690 MtrunA17_Chr1g0185561 23.988 321 204 5 200 517 219 502 1.02e-13 73.9
Msa0843690 MtrunA17_Chr1g0185561 25.098 255 164 2 147 374 192 446 5.56e-11 65.1
Msa0843690 MtrunA17_Chr1g0185561 27.333 300 181 8 272 541 205 497 6.01e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0843690 AT1G10510.1 60.000 640 158 7 2 580 3 605 0.0 736
Msa0843690 AT3G63130.1 29.153 295 196 9 272 563 200 484 5.05e-17 84.7
Msa0843690 AT3G63130.1 24.430 307 198 5 147 424 187 488 3.05e-12 69.7
Msa0843690 AT3G63130.2 29.153 295 196 9 272 563 200 484 5.05e-17 84.7
Msa0843690 AT3G63130.2 24.430 307 198 5 147 424 187 488 3.05e-12 69.7
Msa0843690 AT5G19320.1 27.273 308 186 9 272 563 205 490 4.89e-12 68.9
Msa0843690 AT5G19320.2 27.273 308 186 9 272 563 205 490 4.89e-12 68.9

Find 160 sgRNAs with CRISPR-Local

Find 690 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTAATTTCCTTACCAAATT+TGG 0.106216 5_4:-21399046 Msa0843690:CDS
CCTGGCACCAACCAAGTTTA+AGG 0.149470 5_4:+21399564 None:intergenic
AGATCGTAAGGTGCAGATTT+TGG 0.189380 5_4:-21397995 Msa0843690:three_prime_UTR
GGCAACTATGGTGGTGCTTT+GGG 0.192596 5_4:-21401333 Msa0843690:CDS
ATTTAGGATTTAATGAAATA+AGG 0.199745 5_4:-21399221 Msa0843690:CDS
CTGAAGACTCTTGATCTTTC+AGG 0.215065 5_4:-21404345 Msa0843690:CDS
AAATAGTACCTGACCAAATT+TGG 0.219290 5_4:+21399033 None:intergenic
GCCAAGGCCTTGGCTCCATC+TGG 0.233421 5_4:+21399620 None:intergenic
GCTCTAACCTCGCTAGATTT+AGG 0.247395 5_4:-21399237 Msa0843690:CDS
TGTTTGTTTCTGTATAGTTT+TGG 0.258890 5_4:-21399881 Msa0843690:CDS
CACCGAATCCAAATCTAAAA+TGG 0.259839 5_4:+21398063 None:intergenic
CGAACTTCGACACGTGCTTC+TGG 0.268208 5_4:-21408307 Msa0843690:CDS
TGGCAACTATGGTGGTGCTT+TGG 0.272094 5_4:-21401334 Msa0843690:CDS
GCTTACAGTTATCTGGAAAT+TGG 0.290180 5_4:-21406818 Msa0843690:intron
CGCCGGTTGCAATCGCTTGC+CGG 0.291440 5_4:-21408424 Msa0843690:CDS
TTTAGGATTTAATGAAATAA+GGG 0.296450 5_4:-21399220 Msa0843690:intron
AATTAATAAGTTAAAATTAC+AGG 0.296721 5_4:-21399828 Msa0843690:CDS
GTCGCAGACTTTGATTGCTT+TGG 0.305875 5_4:+21406772 None:intergenic
CATTTGCACGGAAATTCTAT+TGG 0.306066 5_4:-21400947 Msa0843690:CDS
TGTAAATGTTCAACCATAAC+AGG 0.310031 5_4:+21400689 None:intergenic
TTGAGGGCAACAAGTCTATA+AGG 0.312274 5_4:-21401287 Msa0843690:CDS
AACTTACTTGCGGCGGTTGC+GGG 0.315570 5_4:+21408540 None:intergenic
AACGAATTGGACGGTGGTTC+CGG 0.317063 5_4:+21408405 None:intergenic
CAAATTTGTTGTCTCAGCTT+GGG 0.325903 5_4:-21406696 Msa0843690:CDS
TTCGATTCAAGTGGCAACTA+TGG 0.325967 5_4:-21401345 Msa0843690:intron
GCCACGAATGTTGCTCCGTT+TGG 0.350546 5_4:-21408217 Msa0843690:CDS
TGAATTGAAGATTTAAATAG+TGG 0.353547 5_4:+21408633 None:intergenic
AAAGGTGCTTTCTATGTTGC+TGG 0.354044 5_4:-21400733 Msa0843690:CDS
CTTGGCTCCATCTGGGCCAA+TGG 0.354591 5_4:+21399628 None:intergenic
TTCTAGAAGCTTCGTGGTTA+AGG 0.356055 5_4:-21408335 Msa0843690:CDS
GATGTGGCAGGGCGCAATTT+TGG 0.358772 5_4:-21405932 Msa0843690:intron
TAACTTACTTGCGGCGGTTG+CGG 0.363077 5_4:+21408539 None:intergenic
GAGGTAGGGGTTTACAAGTC+TGG 0.364818 5_4:-21401597 Msa0843690:intron
CTGAATCGCCGAAGACCGTT+TGG 0.365424 5_4:-21408370 Msa0843690:intron
CCCAGATGGAGCCAAGGCCT+TGG 0.365753 5_4:-21399621 Msa0843690:CDS
ACAAATTTGTTGTCTCAGCT+TGG 0.371288 5_4:-21406697 Msa0843690:CDS
TTGGCTCCATCTGGGCCAAT+GGG 0.371339 5_4:+21399629 None:intergenic
TAATACCACAATATCAGTTC+TGG 0.377304 5_4:-21399420 Msa0843690:CDS
CATTCAGTTTCTGTTTAGAT+TGG 0.379274 5_4:+21406659 None:intergenic
CTGGCACCAACCAAGTTTAA+GGG 0.383995 5_4:+21399565 None:intergenic
AAAAGATCAAAAGCCTGTTA+TGG 0.385142 5_4:-21400702 Msa0843690:CDS
GTCAATAACGACATTAGATA+TGG 0.393048 5_4:-21399921 Msa0843690:CDS
GGTTTGGTGGTGTTCTTTGT+TGG 0.394439 5_4:+21408742 None:intergenic
CAGATGCTTTAAAGGAAAAT+CGG 0.404566 5_4:-21399943 Msa0843690:CDS
TATAACTTCGGCCAAGGCCT+TGG 0.408081 5_4:+21399610 None:intergenic
TCAGGCGGATGCAACGCTTT+CGG 0.409173 5_4:-21408260 Msa0843690:CDS
TTAATTCTTGGGGCCAGAGC+AGG 0.413073 5_4:+21399845 None:intergenic
CGACACGTGCTTCTGGTTCT+CGG 0.421744 5_4:-21408300 Msa0843690:CDS
GCAACTATGGTGGTGCTTTG+GGG 0.423650 5_4:-21401332 Msa0843690:CDS
TTCAATCCTGTGTGATCCAC+TGG 0.428764 5_4:+21398142 None:intergenic
GTTTGGTGGTGTTCTTTGTT+GGG 0.429631 5_4:+21408743 None:intergenic
GTATTCTGTGTCCCCTGCTC+TGG 0.430420 5_4:-21399858 Msa0843690:CDS
GACTTTGATTGCTTTGGAGT+TGG 0.431608 5_4:+21406778 None:intergenic
ATTGCAGGGTGCATTGTGTC+TGG 0.434962 5_4:-21399286 Msa0843690:intron
GGCAATCCTGTTGGAGATGA+AGG 0.435902 5_4:-21404324 Msa0843690:CDS
GGAATTCGTTCTTTGATGAC+TGG 0.448428 5_4:-21400917 Msa0843690:CDS
TCAATCCTTGTGAAGCAGAC+TGG 0.451465 5_4:+21406740 None:intergenic
CAAGCGATTGCAACCGGCGG+CGG 0.452096 5_4:+21408428 None:intergenic
CTCCTAAACCAAACGGTCTT+CGG 0.454472 5_4:+21408362 None:intergenic
TTTCCTTACCAAATTTGGTC+AGG 0.455058 5_4:-21399041 Msa0843690:intron
CTGCTTCACAAGGATTGAAA+TGG 0.456014 5_4:-21406735 Msa0843690:CDS
GGAAATAACATTCATGCTGT+TGG 0.457502 5_4:-21399803 Msa0843690:CDS
GGAAATTCTATTGGAGATGA+AGG 0.458044 5_4:-21400938 Msa0843690:CDS
TGCAACGCTTTCGGTTGCTT+CGG 0.462705 5_4:-21408251 Msa0843690:CDS
TTCCGGCAAGCGATTGCAAC+CGG 0.465282 5_4:+21408422 None:intergenic
CCTTAAACTTGGTTGGTGCC+AGG 0.465386 5_4:-21399564 Msa0843690:intron
CTTACGCAGATAGGAGCAAA+AGG 0.467695 5_4:-21399473 Msa0843690:intron
TTAGCTCCTTCATCTCCAAC+AGG 0.469951 5_4:+21404318 None:intergenic
TCAGCTTGGGGCGAAGATTG+AGG 0.471276 5_4:-21406683 Msa0843690:CDS
GTTCTGGACTTACGAGCAAA+TGG 0.472854 5_4:-21399404 Msa0843690:CDS
CCAAGGCCTTGGCTCCATCT+GGG 0.475782 5_4:+21399621 None:intergenic
ATTCTTTCTTGCGGAGAGCT+TGG 0.477259 5_4:-21405897 Msa0843690:CDS
CAGCTTGGGGCGAAGATTGA+GGG 0.477389 5_4:-21406682 Msa0843690:CDS
GAGAGTTTATCGCGAGTCTC+AGG 0.483584 5_4:-21408278 Msa0843690:CDS
TGTAGCTTCGTCTCCGCCGC+CGG 0.485091 5_4:-21408441 Msa0843690:intron
AAGGAGAACGACTAGAGGTT+TGG 0.485643 5_4:+21408726 None:intergenic
TATTAGCTGCCGGCCAGTAC+TGG 0.487778 5_4:-21398803 Msa0843690:intron
CAACTATGGTGGTGCTTTGG+GGG 0.490150 5_4:-21401331 Msa0843690:CDS
GAACTTAGTTATAATCCCAT+TGG 0.491304 5_4:-21399644 Msa0843690:CDS
GCAAATGGAATAACTGCTGC+TGG 0.492022 5_4:-21404408 Msa0843690:CDS
GAGTCGGAAGGATAACGAAT+TGG 0.496132 5_4:+21408392 None:intergenic
TCCATGGAACTTTATAACTT+CGG 0.498470 5_4:+21399598 None:intergenic
AACAACTCATTGACAGCTAA+AGG 0.500253 5_4:-21400751 Msa0843690:CDS
AGTGGATCACACAGGATTGA+AGG 0.501978 5_4:-21398140 Msa0843690:three_prime_UTR
GCCGAAGTTATAAAGTTCCA+TGG 0.510009 5_4:-21399599 Msa0843690:CDS
AGTGGAAGTGTTTAAAGACA+TGG 0.513176 5_4:+21408580 None:intergenic
ATCTTTCAAAACTTTAGCAA+CGG 0.514052 5_4:+21399772 None:intergenic
TGCATTGGCTAAAGCACTTG+AGG 0.518489 5_4:-21401304 Msa0843690:CDS
TATAATCCCATTGGCCCAGA+TGG 0.518540 5_4:-21399635 Msa0843690:CDS
TAGGGGTTTACAAGTCTGGC+TGG 0.518877 5_4:-21401593 Msa0843690:CDS
AAGGTGCTTTCTATGTTGCT+GGG 0.521393 5_4:-21400732 Msa0843690:CDS
TAATTCTTGGGGCCAGAGCA+GGG 0.526886 5_4:+21399846 None:intergenic
TCGTCAAACTCACAGGATGA+TGG 0.528672 5_4:-21399136 Msa0843690:intron
TACAGTTATCTGGAAATTGG+TGG 0.530008 5_4:-21406815 Msa0843690:intron
GGAGAGCTTGGCATTTAACC+AGG 0.535384 5_4:-21405885 Msa0843690:intron
AACATTCATGCTGTTGGAGT+TGG 0.536123 5_4:-21399797 Msa0843690:CDS
AAATTTGTTGTCTCAGCTTG+GGG 0.537078 5_4:-21406695 Msa0843690:CDS
GTGTTCTTAGCACTTACTAT+CGG 0.538286 5_4:-21408193 Msa0843690:intron
TTAAATAGTGGGAAATTCAG+TGG 0.538525 5_4:+21408645 None:intergenic
GATCTTTCAGGCAATCCTGT+TGG 0.539593 5_4:-21404333 Msa0843690:CDS
TGGAAACAGATCCTGTGCAG+TGG 0.542019 5_4:+21398083 None:intergenic
GAACGAGCTCTTACCAGTAC+TGG 0.542077 5_4:+21398790 None:intergenic
GCATTGGCTAAAGCACTTGA+GGG 0.543471 5_4:-21401303 Msa0843690:CDS
TGAAGGATTATTCTTTCTTG+CGG 0.550404 5_4:-21405906 Msa0843690:CDS
GTGTGCGTAAAGAGAGAGAG+TGG 0.550946 5_4:+21408562 None:intergenic
AACATTTACATGAATGACAT+TGG 0.551290 5_4:-21400676 Msa0843690:CDS
GTAGAGTGTCTCGAGAAGAA+AGG 0.551327 5_4:+21408707 None:intergenic
ACATGGTTTACGAAGAATGA+AGG 0.555717 5_4:+21408597 None:intergenic
AAACTTACACTTCTAGACAT+AGG 0.558147 5_4:-21400775 Msa0843690:CDS
CTGCACCTTACGATCTTGAT+CGG 0.563633 5_4:+21398002 None:intergenic
TTATATTGCATATTAGCTGC+CGG 0.564406 5_4:-21398813 Msa0843690:three_prime_UTR
TGAGGGCAACAAGTCTATAA+GGG 0.565077 5_4:-21401286 Msa0843690:intron
GTACCTGACCAAATTTGGTA+AGG 0.565710 5_4:+21399038 None:intergenic
TGAAGGGCCACGATCACCAC+TGG 0.566795 5_4:-21398123 Msa0843690:three_prime_UTR
AGCAGGTTCTAGAAGCTTCG+TGG 0.572221 5_4:-21408341 Msa0843690:intron
AGTGCTAAGAACACTCCAAA+CGG 0.573474 5_4:+21408202 None:intergenic
TTACGCAGATAGGAGCAAAA+GGG 0.574562 5_4:-21399472 Msa0843690:intron
ATTAATAAGTTAAAATTACA+GGG 0.576499 5_4:-21399827 Msa0843690:CDS
TCCAAACGGAGCAACATTCG+TGG 0.576544 5_4:+21408216 None:intergenic
TGTTGGAGATGAAGGAGCTA+AGG 0.580011 5_4:-21404316 Msa0843690:intron
TGTGTTTGAGATGACTGAAA+AGG 0.586074 5_4:-21398894 Msa0843690:CDS
CATTGGCCCAGATGGAGCCA+AGG 0.586640 5_4:-21399627 Msa0843690:CDS
TTTGACTGCATGCAGAATCA+TGG 0.587118 5_4:-21398037 Msa0843690:three_prime_UTR
GATTCAAGTGGCAACTATGG+TGG 0.588855 5_4:-21401342 Msa0843690:intron
ATTAAATCCTAAATCTAGCG+AGG 0.589016 5_4:+21399230 None:intergenic
GAACTTTATAACTTCGGCCA+AGG 0.589359 5_4:+21399604 None:intergenic
GAAAGCCAGTCTGCTTCACA+AGG 0.590388 5_4:-21406745 Msa0843690:CDS
GTGGATCACACAGGATTGAA+GGG 0.592023 5_4:-21398139 Msa0843690:three_prime_UTR
GAGAACGACTAGAGGTTTGG+TGG 0.592187 5_4:+21408729 None:intergenic
AATGTCCGATCAAGATCGTA+AGG 0.594416 5_4:-21398007 Msa0843690:three_prime_UTR
AATTCTTGGGGCCAGAGCAG+GGG 0.595247 5_4:+21399847 None:intergenic
GAAGAAAGGAGAACGACTAG+AGG 0.597925 5_4:+21408721 None:intergenic
GGTCTTCGGCGATTCAGAGT+CGG 0.599218 5_4:+21408376 None:intergenic
AATGTGAAAACCCTTAAACT+TGG 0.599464 5_4:-21399575 Msa0843690:CDS
TGAAAACCCTTAAACTTGGT+TGG 0.600564 5_4:-21399571 Msa0843690:CDS
CTGGAACAAAAGTGAATCAG+TGG 0.602375 5_4:+21398161 None:intergenic
GAATTGAAGATTTAAATAGT+GGG 0.602709 5_4:+21408634 None:intergenic
GGAAACAGATCCTGTGCAGT+GGG 0.603173 5_4:+21398084 None:intergenic
TTACGAAGAATGAAGGAGCA+TGG 0.607432 5_4:+21408604 None:intergenic
GCTGTCACATCTCTAAACAT+TGG 0.622840 5_4:-21399070 Msa0843690:CDS
TACGCAGATAGGAGCAAAAG+GGG 0.624944 5_4:-21399471 Msa0843690:intron
CGGCAAGCGATTGCAACCGG+CGG 0.628871 5_4:+21408425 None:intergenic
TTTCAGTCATCTCAAACACA+TGG 0.631330 5_4:+21398897 None:intergenic
ACTGGATTAACGTCACATAG+AGG 0.632787 5_4:-21400899 Msa0843690:intron
CATGAATGACATTGGTGATG+AGG 0.633304 5_4:-21400668 Msa0843690:intron
AGTTTATCGCGAGTCTCAGG+CGG 0.642766 5_4:-21408275 Msa0843690:CDS
AAGGAAATTGCCATATACTG+CGG 0.659989 5_4:-21398852 Msa0843690:three_prime_UTR
GGACAGGAACTACATTTGCA+CGG 0.660249 5_4:-21400959 Msa0843690:intron
ATGAGTTTGCTCGAGAACTG+AGG 0.662789 5_4:-21406639 Msa0843690:CDS
CGGAAGGATAACGAATTGGA+CGG 0.666420 5_4:+21408396 None:intergenic
AATAAGTTAAAATTACAGGG+AGG 0.669045 5_4:-21399824 Msa0843690:CDS
TAAGTCCAGAACTGATATTG+TGG 0.673601 5_4:+21399415 None:intergenic
GGAGTGACCAGTGGTGATCG+TGG 0.676404 5_4:+21398116 None:intergenic
TTTGTTCCAGTGGATCACAC+AGG 0.682020 5_4:-21398148 Msa0843690:three_prime_UTR
TTCGGCGATTCAGAGTCGGA+AGG 0.683412 5_4:+21408380 None:intergenic
AGTTAGTAACTTACTTGCGG+CGG 0.686730 5_4:+21408533 None:intergenic
GAGCTCTTACCAGTACTGGC+CGG 0.689245 5_4:+21398794 None:intergenic
AAGGATAACGAATTGGACGG+TGG 0.721895 5_4:+21408399 None:intergenic
AAAAGGGGCAGAGTTCATTG+CGG 0.749883 5_4:-21399456 Msa0843690:CDS
CTATACAGAAACAAACACAG+AGG 0.807743 5_4:+21399887 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATCAATTTATATGTA+TGG + chr5_4:21400669-21400688 None:intergenic 10.0%
!! AAGATTATTTATGTTTATTT+CGG + chr5_4:21402564-21402583 None:intergenic 10.0%
!! AAATTGATAAAAATTAAGAT+GGG + chr5_4:21403945-21403964 None:intergenic 10.0%
!! TAAATTGATAAAAATTAAGA+TGG + chr5_4:21403946-21403965 None:intergenic 10.0%
!!! TTAAAATAAAATTTGGAATT+TGG + chr5_4:21405107-21405126 None:intergenic 10.0%
!!! TTTTATTTTAATTTGTTTCT+TGG - chr5_4:21405116-21405135 Msa0843690:intron 10.0%
!!! ATTTTAACTTATTAATTCTT+GGG + chr5_4:21406910-21406929 None:intergenic 10.0%
!!! AATTTTAACTTATTAATTCT+TGG + chr5_4:21406911-21406930 None:intergenic 10.0%
!! AATTAATAAGTTAAAATTAC+AGG - chr5_4:21406913-21406932 Msa0843690:intron 10.0%
!! ATTAATAAGTTAAAATTACA+GGG - chr5_4:21406914-21406933 Msa0843690:intron 10.0%
!! TTATAAAATATATTGTCAAA+AGG - chr5_4:21408445-21408464 Msa0843690:intron 10.0%
!! ATATGATTGATATGTATAAT+AGG - chr5_4:21399399-21399418 Msa0843690:CDS 15.0%
!! AATTAGTTCAATATATTCTT+AGG - chr5_4:21400580-21400599 Msa0843690:intron 15.0%
!! ATTAGTTCAATATATTCTTA+GGG - chr5_4:21400581-21400600 Msa0843690:intron 15.0%
!! ATCATAATATAAAAAACACA+TGG + chr5_4:21400646-21400665 None:intergenic 15.0%
!! AATTTATTCAATTATTCAGT+AGG + chr5_4:21401002-21401021 None:intergenic 15.0%
!! AACATATTACTTAATTCAAA+AGG - chr5_4:21401350-21401369 Msa0843690:intron 15.0%
!!! ACGATACAAATTTTTTAAAA+CGG - chr5_4:21401607-21401626 Msa0843690:intron 15.0%
!! AAATTGACAAAAAAAAAATG+AGG + chr5_4:21401868-21401887 None:intergenic 15.0%
!! TAGAAGAAAAAAAATTCTAA+GGG + chr5_4:21402016-21402035 None:intergenic 15.0%
!! TTAGAAGAAAAAAAATTCTA+AGG + chr5_4:21402017-21402036 None:intergenic 15.0%
!! ATTAATAACATCTCTTAATT+TGG - chr5_4:21402466-21402485 Msa0843690:intron 15.0%
!! TTAATAACATCTCTTAATTT+GGG - chr5_4:21402467-21402486 Msa0843690:intron 15.0%
!! AGATTATTTATGTTTATTTC+GGG + chr5_4:21402563-21402582 None:intergenic 15.0%
!!! TTAAGTTAATAACTTACTTT+TGG - chr5_4:21402780-21402799 Msa0843690:intron 15.0%
!!! TTTTTTAATCTTGATATACA+TGG - chr5_4:21403075-21403094 Msa0843690:intron 15.0%
!!! TTTTTAATCTTGATATACAT+GGG - chr5_4:21403076-21403095 Msa0843690:intron 15.0%
!! AATTGATAAAAATTAAGATG+GGG + chr5_4:21403944-21403963 None:intergenic 15.0%
!!! TTTTGATGAAAATAGAATAA+TGG - chr5_4:21404125-21404144 Msa0843690:intron 15.0%
!!! AGTAATACTTTTTTTTAACT+CGG + chr5_4:21404895-21404914 None:intergenic 15.0%
!! ATAAACTTAGGAAAAATATA+AGG + chr5_4:21405520-21405539 None:intergenic 15.0%
!! TTACTTGTAAAATATTAAAG+TGG + chr5_4:21405919-21405938 None:intergenic 15.0%
!! AAATTTGGACAATAAATTAA+TGG - chr5_4:21406342-21406361 Msa0843690:intron 15.0%
!! AATTTGGACAATAAATTAAT+GGG - chr5_4:21406343-21406362 Msa0843690:intron 15.0%
!! TTGAAACTTAAAAAACTTAA+AGG + chr5_4:21406418-21406437 None:intergenic 15.0%
!!! AAGTTTTTTAAGTTTCAAAT+TGG - chr5_4:21406420-21406439 Msa0843690:intron 15.0%
!! GTATTAAATTAACAACTTAA+AGG + chr5_4:21406447-21406466 None:intergenic 15.0%
!!! TAAGTTTTTAAGTTTCAAAA+AGG + chr5_4:21406489-21406508 None:intergenic 15.0%
!! AAAACTTAAAAAACTTCAAA+TGG - chr5_4:21406501-21406520 Msa0843690:intron 15.0%
!! AAACTTAAAAAACTTCAAAT+GGG - chr5_4:21406502-21406521 Msa0843690:intron 15.0%
!! AAGTTTATACACATTAATTT+AGG + chr5_4:21406613-21406632 None:intergenic 15.0%
!! AATAATTATGTAAAATTGTC+AGG - chr5_4:21406760-21406779 Msa0843690:CDS 15.0%
!! ATAATTATGTAAAATTGTCA+GGG - chr5_4:21406761-21406780 Msa0843690:CDS 15.0%
!!! TTTTAACTTATTAATTCTTG+GGG + chr5_4:21406909-21406928 None:intergenic 15.0%
!!! ATTTAGGATTTAATGAAATA+AGG - chr5_4:21407520-21407539 Msa0843690:intron 15.0%
!!! TTTAGGATTTAATGAAATAA+GGG - chr5_4:21407521-21407540 Msa0843690:intron 15.0%
!! AGAAAATAACATAAAATGAA+AGG + chr5_4:21407770-21407789 None:intergenic 15.0%
!!! TTTATGTTATTTTCTTTTGA+AGG - chr5_4:21407775-21407794 Msa0843690:intron 15.0%
!!! AATATACATTGATTATTGTT+GGG + chr5_4:21408123-21408142 None:intergenic 15.0%
!!! TAATATACATTGATTATTGT+TGG + chr5_4:21408124-21408143 None:intergenic 15.0%
!! ATCTCATTAAAAAAACTATT+TGG - chr5_4:21408369-21408388 Msa0843690:intron 15.0%
!! GAATTGAAGATTTAAATAGT+GGG + chr5_4:21398110-21398129 None:intergenic 20.0%
!! TGAATTGAAGATTTAAATAG+TGG + chr5_4:21398111-21398130 None:intergenic 20.0%
!! TTCAAAAACAATAGTAAAAC+AGG + chr5_4:21399024-21399043 None:intergenic 20.0%
!!! GATTTGTAGATTTTGTATTA+AGG - chr5_4:21399196-21399215 Msa0843690:intron 20.0%
!! ATATGTATCATCATTATCAT+TGG - chr5_4:21399435-21399454 Msa0843690:CDS 20.0%
!!! GCAATATAATTGATCATTTT+AGG - chr5_4:21399500-21399519 Msa0843690:intron 20.0%
!! TCTCCAAAAATAAAATGATA+TGG - chr5_4:21399575-21399594 Msa0843690:CDS 20.0%
!!! ACACCATATCATTTTATTTT+TGG + chr5_4:21399581-21399600 None:intergenic 20.0%
!! CAAAATCATTGTTATCTAAA+AGG + chr5_4:21399670-21399689 None:intergenic 20.0%
!!! ATATATGAAAAAGGTGTTTA+TGG - chr5_4:21400167-21400186 Msa0843690:intron 20.0%
!! TTCAAAACAAATTTGATACT+TGG + chr5_4:21400611-21400630 None:intergenic 20.0%
!! AATAACAATCTGATAAATGA+AGG + chr5_4:21400892-21400911 None:intergenic 20.0%
!! TGTTATTGAAAATTAAACTG+TGG - chr5_4:21400905-21400924 Msa0843690:CDS 20.0%
!! TTAAGTAATATGTTGTAAGT+AGG + chr5_4:21401344-21401363 None:intergenic 20.0%
!! AAATTTGTATCGTAAATGAT+GGG + chr5_4:21401600-21401619 None:intergenic 20.0%
!! AAAATTTGTATCGTAAATGA+TGG + chr5_4:21401601-21401620 None:intergenic 20.0%
!! AGATATGTAATTTATCAGTT+TGG - chr5_4:21402040-21402059 Msa0843690:intron 20.0%
!! TATCAGTTTGGTAAAATATA+AGG - chr5_4:21402052-21402071 Msa0843690:intron 20.0%
!!! TGTTATTTCAAGGTTTTTTT+TGG - chr5_4:21402667-21402686 Msa0843690:intron 20.0%
!!! AACTCCAATAAAATGATTTT+CGG + chr5_4:21402737-21402756 None:intergenic 20.0%
!! AGTAAGTTATTAACTTAACT+TGG + chr5_4:21402778-21402797 None:intergenic 20.0%
!!! AATTTAATCTCTTTTGACTT+TGG - chr5_4:21403960-21403979 Msa0843690:intron 20.0%
!! TAAAAAAAACCAAACAAATC+TGG + chr5_4:21404244-21404263 None:intergenic 20.0%
!! AAAAAATATTTGATACTCCA+CGG - chr5_4:21404454-21404473 Msa0843690:intron 20.0%
!!! TTTTTTTTTTTTTGCTGTGT+TGG - chr5_4:21404508-21404527 Msa0843690:intron 20.0%
!!! TTTAATTTGTTTCTTGGATT+TGG - chr5_4:21405122-21405141 Msa0843690:intron 20.0%
!! AAAGGAGATAAAAAAAGTAA+TGG + chr5_4:21405356-21405375 None:intergenic 20.0%
!!! TTATTTTCTTTCCAATGAAA+TGG - chr5_4:21405490-21405509 Msa0843690:intron 20.0%
!! CATGATTTATTCTGAATATA+TGG - chr5_4:21405761-21405780 Msa0843690:intron 20.0%
!! ATATATTGGATAACAGTTAT+GGG + chr5_4:21406259-21406278 None:intergenic 20.0%
!! TATATATTGGATAACAGTTA+TGG + chr5_4:21406260-21406279 None:intergenic 20.0%
!!! TGTATCTGAAACAAAAAATT+TGG - chr5_4:21406327-21406346 Msa0843690:intron 20.0%
!!! TTTAAGTTTGACAAAAATAC+CGG - chr5_4:21406386-21406405 Msa0843690:intron 20.0%
!! GTATCAAATTAACAACTTAA+AGG - chr5_4:21406526-21406545 Msa0843690:intron 20.0%
!!! GTTGTTATTGAAAATATGAA+GGG + chr5_4:21406702-21406721 None:intergenic 20.0%
!!! AGTTGTTATTGAAAATATGA+AGG + chr5_4:21406703-21406722 None:intergenic 20.0%
!!! TTTTTTCATGAAACATTGAT+TGG + chr5_4:21407433-21407452 None:intergenic 20.0%
!! TAATTGTACAATATACTACT+TGG + chr5_4:21408268-21408287 None:intergenic 20.0%
!! AAGTAGTATATTGTACAATT+AGG - chr5_4:21408267-21408286 Msa0843690:CDS 20.0%
! TTTGTGATTATTTGAGAATG+AGG - chr5_4:21398621-21398640 Msa0843690:intron 25.0%
! TCAATTTCACAAATTATCAC+CGG + chr5_4:21398697-21398716 None:intergenic 25.0%
! CACAATTATTCTAAGTATAG+TGG - chr5_4:21398849-21398868 Msa0843690:three_prime_UTR 25.0%
! TTTAATTGATATGCATGATG+TGG - chr5_4:21398903-21398922 Msa0843690:CDS 25.0%
!!! AATGGTATTGGTTTTGTATA+TGG - chr5_4:21398927-21398946 Msa0843690:intron 25.0%
!!! TTTTTGAAATTGCAACTAGT+GGG - chr5_4:21399036-21399055 Msa0843690:intron 25.0%
! AGTAACTATTGTAGAAAAGA+TGG - chr5_4:21399134-21399153 Msa0843690:intron 25.0%
! AATGAATTGACATAGCATTA+TGG - chr5_4:21399312-21399331 Msa0843690:intron 25.0%
! TGCAAATAATAATAGAGTGT+TGG - chr5_4:21399362-21399381 Msa0843690:intron 25.0%
!!! TAGTAGTCATTTTGTAATTG+AGG - chr5_4:21399478-21399497 Msa0843690:intron 25.0%
! GTAAACTTTCATAATTGTTG+TGG - chr5_4:21399884-21399903 Msa0843690:CDS 25.0%
!! TTTTCATATACTGATATGTC+AGG - chr5_4:21400128-21400147 Msa0843690:intron 25.0%
! TTTAAAAGTCCACTCATATT+TGG - chr5_4:21400431-21400450 Msa0843690:intron 25.0%
! GTGATAATTGTTTGATTCTT+TGG - chr5_4:21400474-21400493 Msa0843690:intron 25.0%
!!! ATTTTGACCACATTATAAAC+AGG - chr5_4:21400533-21400552 Msa0843690:intron 25.0%
!! TTTTGACCACATTATAAACA+GGG - chr5_4:21400534-21400553 Msa0843690:intron 25.0%
! ATAGTACACACAGATTAAAA+GGG + chr5_4:21400744-21400763 None:intergenic 25.0%
! AATAGTACACACAGATTAAA+AGG + chr5_4:21400745-21400764 None:intergenic 25.0%
! CAGTTATTATACATATGATG+TGG - chr5_4:21400793-21400812 Msa0843690:intron 25.0%
!!! TCCAATGGAATACTTATTTT+TGG + chr5_4:21401046-21401065 None:intergenic 25.0%
! TAAGTGCAAATATGGATATA+TGG - chr5_4:21401167-21401186 Msa0843690:intron 25.0%
! CTTAATTCAAAAGGTCATAA+TGG - chr5_4:21401359-21401378 Msa0843690:intron 25.0%
! ATTAACGACTTAGATCTATA+GGG - chr5_4:21401455-21401474 Msa0843690:intron 25.0%
! TCGTTATGAAAAAGTTGTAT+TGG - chr5_4:21401562-21401581 Msa0843690:CDS 25.0%
! TATAAGCTACAAGTTTCAAA+TGG + chr5_4:21401668-21401687 None:intergenic 25.0%
!!! GTTTTAATCAATTTCCTCTT+TGG + chr5_4:21401925-21401944 None:intergenic 25.0%
!!! AAATTCTAAGGGTTTTTAAC+TGG + chr5_4:21402005-21402024 None:intergenic 25.0%
! TTATACTAAAATGTGCTTGT+TGG - chr5_4:21402156-21402175 Msa0843690:intron 25.0%
! AATTTAGAGAAATACTGAGA+AGG + chr5_4:21402512-21402531 None:intergenic 25.0%
! TTATTTATGTTTATTTCGGG+TGG + chr5_4:21402560-21402579 None:intergenic 25.0%
!! AATGCCGAAAATCATTTTAT+TGG - chr5_4:21402730-21402749 Msa0843690:intron 25.0%
! TATTGGAGTTTGATCTTAAT+AGG - chr5_4:21402747-21402766 Msa0843690:intron 25.0%
! AATTAATTGTTGAAGTTGAG+TGG - chr5_4:21402807-21402826 Msa0843690:intron 25.0%
! TAAGATTGAAAAATGATCCT+AGG - chr5_4:21402921-21402940 Msa0843690:intron 25.0%
!! CATAATATCTTAGAGTATCT+TGG + chr5_4:21402954-21402973 None:intergenic 25.0%
! TTTATTAATGAGACTGTAGT+TGG - chr5_4:21403191-21403210 Msa0843690:intron 25.0%
! CTCAAAAGGATAAAAACAAA+TGG + chr5_4:21403227-21403246 None:intergenic 25.0%
! GAGTCAGGTTTATAAATTAT+AGG - chr5_4:21404080-21404099 Msa0843690:intron 25.0%
!!! AGAAAGTGTTGTTTTTTCAA+AGG - chr5_4:21404319-21404338 Msa0843690:CDS 25.0%
! AAGAAAAAAAAATACTCCAG+CGG + chr5_4:21404490-21404509 None:intergenic 25.0%
! ATATTACTCATAAACCCATT+TGG - chr5_4:21404681-21404700 Msa0843690:intron 25.0%
! TATTACTCATAAACCCATTT+GGG - chr5_4:21404682-21404701 Msa0843690:intron 25.0%
! AACTATGTTCTGACTTTAAA+TGG - chr5_4:21404806-21404825 Msa0843690:intron 25.0%
! ACTATGTTCTGACTTTAAAT+GGG - chr5_4:21404807-21404826 Msa0843690:intron 25.0%
! TACATTATTAGAATACGCAT+GGG + chr5_4:21405070-21405089 None:intergenic 25.0%
!! AATTTGGAATTTGGATACTA+GGG + chr5_4:21405098-21405117 None:intergenic 25.0%
!! AAATTTGGAATTTGGATACT+AGG + chr5_4:21405099-21405118 None:intergenic 25.0%
!! TTACAATATCTAAAGCATGA+AGG + chr5_4:21405310-21405329 None:intergenic 25.0%
! AGAAGTTATGACATAAACTT+AGG + chr5_4:21405532-21405551 None:intergenic 25.0%
! TAAGTTTATGTCATAACTTC+TGG - chr5_4:21405531-21405550 Msa0843690:intron 25.0%
! GAATAAATCATGCTTGTTTA+AGG + chr5_4:21405753-21405772 None:intergenic 25.0%
! TTTATTCTGAATATATGGAC+AGG - chr5_4:21405766-21405785 Msa0843690:intron 25.0%
! AACATTTACATGAATGACAT+TGG - chr5_4:21406065-21406084 Msa0843690:intron 25.0%
! GTATACTAGGCAATATATAT+TGG + chr5_4:21406273-21406292 None:intergenic 25.0%
!!! GGTATTTTTGTCAAACTTAA+AGG + chr5_4:21406387-21406406 None:intergenic 25.0%
! TTAAGTTTGACAAAAATACC+GGG - chr5_4:21406387-21406406 Msa0843690:intron 25.0%
! AAAAACTTAAAGGATTAACC+CGG + chr5_4:21406408-21406427 None:intergenic 25.0%
! TTTCAAAAAGGTCCTTAAAA+GGG + chr5_4:21406477-21406496 None:intergenic 25.0%
!!! TACTGGTTTAAGTTTCAAAT+AGG + chr5_4:21406553-21406572 None:intergenic 25.0%
!! TGAAACTTAAACCAGTATTT+TGG - chr5_4:21406556-21406575 Msa0843690:intron 25.0%
!!! TTTTAGTTTGACCAAAATAC+TGG + chr5_4:21406570-21406589 None:intergenic 25.0%
!!! AGTATTTTGGTCAAACTAAA+AGG - chr5_4:21406569-21406588 Msa0843690:intron 25.0%
! AACAACTTGCAACAATTAAA+AGG - chr5_4:21406716-21406735 Msa0843690:CDS 25.0%
! AAAAATTGCAGATGCTTTAA+AGG - chr5_4:21406790-21406809 Msa0843690:CDS 25.0%
!!! TGTTTGTTTCTGTATAGTTT+TGG - chr5_4:21406860-21406879 Msa0843690:intron 25.0%
!!! GTTTGTTTCTGTATAGTTTT+GGG - chr5_4:21406861-21406880 Msa0843690:intron 25.0%
! AATAAGTTAAAATTACAGGG+AGG - chr5_4:21406917-21406936 Msa0843690:intron 25.0%
! ATCTTTCAAAACTTTAGCAA+CGG + chr5_4:21406972-21406991 None:intergenic 25.0%
! TTTCATGAAAAAACTATTGC+AGG - chr5_4:21407440-21407459 Msa0843690:intron 25.0%
! TTCATGAAAAAACTATTGCA+GGG - chr5_4:21407441-21407460 Msa0843690:intron 25.0%
!! TTTGTCTTTTACATTCACAA+CGG - chr5_4:21407552-21407571 Msa0843690:intron 25.0%
! AGTAATTTCCTTACCAAATT+TGG - chr5_4:21407695-21407714 Msa0843690:intron 25.0%
!! AAATTGCCATCTTTTTCTAA+AGG - chr5_4:21407870-21407889 Msa0843690:intron 25.0%
!! CAATTTCCTTTAGAAAAAGA+TGG + chr5_4:21407879-21407898 None:intergenic 25.0%
! TACTTAACTCAATGAATGAA+TGG + chr5_4:21407999-21408018 None:intergenic 25.0%
! TCATTCATTGAGTTAAGTAT+AGG - chr5_4:21408000-21408019 Msa0843690:intron 25.0%
! TTTCATGAACTAAAAATCGA+AGG + chr5_4:21408049-21408068 None:intergenic 25.0%
!!! TCGATTTTTAGTTCATGAAA+CGG - chr5_4:21408049-21408068 Msa0843690:intron 25.0%
! TTATTATGAAAATCAACCTC+TGG + chr5_4:21408203-21408222 None:intergenic 25.0%
! TATACCACATGAATATACAT+TGG - chr5_4:21408237-21408256 Msa0843690:CDS 25.0%
! AAAAAACTATTTGGATGAGA+AGG - chr5_4:21408378-21408397 Msa0843690:CDS 25.0%
! ATAAAGAGAAAGTTAAAGCT+AGG - chr5_4:21408419-21408438 Msa0843690:CDS 25.0%
! TAAAGAGAAAGTTAAAGCTA+GGG - chr5_4:21408420-21408439 Msa0843690:CDS 25.0%
!! TGTCATGTTGTTTGATATTA+TGG - chr5_4:21408488-21408507 Msa0843690:intron 25.0%
!! ATCTGTTTCCATTTTAGATT+TGG - chr5_4:21408670-21408689 Msa0843690:five_prime_UTR 25.0%
!! TTCCATTTTAGATTTGGATT+CGG - chr5_4:21408676-21408695 Msa0843690:five_prime_UTR 25.0%
! TTAAATAGTGGGAAATTCAG+TGG + chr5_4:21398099-21398118 None:intergenic 30.0%
GTTAGTTAGTAACTTACTTG+CGG + chr5_4:21398214-21398233 None:intergenic 30.0%
!!! GTTTTTGAAATTGCAACTAG+TGG - chr5_4:21399035-21399054 Msa0843690:intron 30.0%
! GTTTCTCTTATAGTTTTTCG+AGG + chr5_4:21399270-21399289 None:intergenic 30.0%
!!! GTTGTTGTTATTTTTGAGTC+TGG - chr5_4:21399339-21399358 Msa0843690:intron 30.0%
! TTGATCATTTTAGGCATGAT+AGG - chr5_4:21399509-21399528 Msa0843690:intron 30.0%
TCACTTCTAGGTAATTTGAT+AGG - chr5_4:21399738-21399757 Msa0843690:intron 30.0%
CACATATACTTCAAAATGTC+TGG + chr5_4:21399796-21399815 None:intergenic 30.0%
CATTCAGTTTCTGTTTAGAT+TGG + chr5_4:21400085-21400104 None:intergenic 30.0%
GCTGGATTGATATATGAAAA+AGG - chr5_4:21400158-21400177 Msa0843690:intron 30.0%
TGCTTCTAATTCATTAAACG+AGG - chr5_4:21400200-21400219 Msa0843690:intron 30.0%
TTTCCTCTCAAAAAAACTTG+AGG - chr5_4:21400316-21400335 Msa0843690:intron 30.0%
TTCCTCTCAAAAAAACTTGA+GGG - chr5_4:21400317-21400336 Msa0843690:intron 30.0%
TTACGAATGAAATGCATCAT+TGG - chr5_4:21400353-21400372 Msa0843690:intron 30.0%
TATTATACATATGATGTGGC+AGG - chr5_4:21400797-21400816 Msa0843690:intron 30.0%
ATTATACATATGATGTGGCA+GGG - chr5_4:21400798-21400817 Msa0843690:intron 30.0%
TGAAGGATTATTCTTTCTTG+CGG - chr5_4:21400835-21400854 Msa0843690:intron 30.0%
TCTGATAAATGAAGGATAGT+AGG + chr5_4:21400884-21400903 None:intergenic 30.0%
ATGAATACTCTATGTGATTG+TGG + chr5_4:21400952-21400971 None:intergenic 30.0%
TATTCATTGCTTCCGTTATT+TGG - chr5_4:21400965-21400984 Msa0843690:intron 30.0%
GCCAAAAATAAGTATTCCAT+TGG - chr5_4:21401042-21401061 Msa0843690:intron 30.0%
! TCATAGAAGCATACTAATAG+TGG - chr5_4:21401088-21401107 Msa0843690:intron 30.0%
TCAGCTATTAAGTGCAAATA+TGG - chr5_4:21401159-21401178 Msa0843690:intron 30.0%
ACATTTATGCAATGACATGA+AGG - chr5_4:21401217-21401236 Msa0843690:intron 30.0%
! ATATTCATCTATGACTTGCA+AGG - chr5_4:21401428-21401447 Msa0843690:intron 30.0%
CATTAACGACTTAGATCTAT+AGG - chr5_4:21401454-21401473 Msa0843690:intron 30.0%
!! CTTTTTCATAACGAGTAACT+TGG + chr5_4:21401556-21401575 None:intergenic 30.0%
TGAAACTTGTAGCTTATAGT+TGG - chr5_4:21401670-21401689 Msa0843690:intron 30.0%
! TTTAACCATGTAGTCTTTTC+AGG - chr5_4:21401776-21401795 Msa0843690:intron 30.0%
CCATGTCAAATATGATTAAG+TGG + chr5_4:21401843-21401862 None:intergenic 30.0%
CCACTTAATCATATTTGACA+TGG - chr5_4:21401840-21401859 Msa0843690:intron 30.0%
TATAGAAACATCTTCCAAAG+AGG - chr5_4:21401908-21401927 Msa0843690:intron 30.0%
!! TAAGGGTTTTTAACTGGTTA+TGG + chr5_4:21401999-21402018 None:intergenic 30.0%
GGTAAAATATAAGGATTGCT+TGG - chr5_4:21402061-21402080 Msa0843690:intron 30.0%
GCAAGATTTGACTCAATTAA+TGG + chr5_4:21402099-21402118 None:intergenic 30.0%
! ACATCTCTTAATTTGGGATT+TGG - chr5_4:21402473-21402492 Msa0843690:intron 30.0%
AGAATGAGACTAATCTTATG+TGG - chr5_4:21402638-21402657 Msa0843690:intron 30.0%
GAATGAGACTAATCTTATGT+GGG - chr5_4:21402639-21402658 Msa0843690:intron 30.0%
!!! GTGGGAATTTTGTTATTTCA+AGG - chr5_4:21402657-21402676 Msa0843690:intron 30.0%
! AATGATTTTCGGCATTCTTT+TGG + chr5_4:21402726-21402745 None:intergenic 30.0%
!!! GTTGAGTGGTTTTAGATAAA+AGG - chr5_4:21402821-21402840 Msa0843690:intron 30.0%
AAATTAACTACCCATTGCAA+AGG + chr5_4:21403019-21403038 None:intergenic 30.0%
AGTGCATACAAAGAGTAATA+TGG - chr5_4:21403052-21403071 Msa0843690:intron 30.0%
!! GTCATTTTGTGTATGATTGA+AGG + chr5_4:21403143-21403162 None:intergenic 30.0%
! TTTTATCCTTTTGAGCATCT+TGG - chr5_4:21403232-21403251 Msa0843690:intron 30.0%
GAAGAGTCATTAATTCATCA+TGG + chr5_4:21403284-21403303 None:intergenic 30.0%
ATAGCTTATCATTGTCTAAC+TGG - chr5_4:21403393-21403412 Msa0843690:intron 30.0%
TAGCTTATCATTGTCTAACT+GGG - chr5_4:21403394-21403413 Msa0843690:intron 30.0%
!!! CTCTTTTGACTTTGGTTTAT+TGG - chr5_4:21403968-21403987 Msa0843690:intron 30.0%
AATTTAATCTCTTGTGAGTC+AGG - chr5_4:21404065-21404084 Msa0843690:intron 30.0%
TGAAAAAACAACACTTTCTC+TGG + chr5_4:21404318-21404337 None:intergenic 30.0%
ATGTTAGGTTCAAAGAAATC+TGG - chr5_4:21404362-21404381 Msa0843690:CDS 30.0%
ATTACTCATAAACCCATTTG+GGG - chr5_4:21404683-21404702 Msa0843690:intron 30.0%
CTATGTTCTGACTTTAAATG+GGG - chr5_4:21404808-21404827 Msa0843690:intron 30.0%
! CGAATTTTTCTTCAGCATTT+CGG + chr5_4:21404990-21405009 None:intergenic 30.0%
! TCATGTTGTTGTTAAGTTCA+AGG + chr5_4:21405024-21405043 None:intergenic 30.0%
CTACATTATTAGAATACGCA+TGG + chr5_4:21405071-21405090 None:intergenic 30.0%
! AATTTGTTTCTTGGATTTGG+AGG - chr5_4:21405125-21405144 Msa0843690:intron 30.0%
TTTCAAACAAGGAAGATTAG+AGG + chr5_4:21405261-21405280 None:intergenic 30.0%
! ATCTTCCTTGTTTGAAATCA+AGG - chr5_4:21405264-21405283 Msa0843690:intron 30.0%
! TCTTCCTTGTTTGAAATCAA+GGG - chr5_4:21405265-21405284 Msa0843690:intron 30.0%
AATGTCAGAAGAGTTCTTAA+AGG + chr5_4:21405374-21405393 None:intergenic 30.0%
!!! TGACATTTTTTCGATTCAAG+TGG - chr5_4:21405387-21405406 Msa0843690:intron 30.0%
! AACTTTTGTCAGGTATGATT+TGG + chr5_4:21405648-21405667 None:intergenic 30.0%
AAATCATACCTGACAAAAGT+TGG - chr5_4:21405647-21405666 Msa0843690:intron 30.0%
AATCATACCTGACAAAAGTT+GGG - chr5_4:21405648-21405667 Msa0843690:intron 30.0%
! CAACATTTTGTCATTGTGAT+AGG + chr5_4:21405698-21405717 None:intergenic 30.0%
ACAAGCATTATATGTTCTCA+AGG - chr5_4:21405942-21405961 Msa0843690:intron 30.0%
CAAGCATTATATGTTCTCAA+GGG - chr5_4:21405943-21405962 Msa0843690:intron 30.0%
AAACTTACACTTCTAGACAT+AGG - chr5_4:21405966-21405985 Msa0843690:intron 30.0%
AAAAGATCAAAAGCCTGTTA+TGG - chr5_4:21406039-21406058 Msa0843690:intron 30.0%
TGTAAATGTTCAACCATAAC+AGG + chr5_4:21406055-21406074 None:intergenic 30.0%
TGAGAGTTCATGCAATAAAT+AGG - chr5_4:21406177-21406196 Msa0843690:intron 30.0%
AACAGTTATGGGAAAAAATC+AGG + chr5_4:21406248-21406267 None:intergenic 30.0%
TTTGGATTTGACAGTATACT+AGG + chr5_4:21406286-21406305 None:intergenic 30.0%
!! AACTGGTTTATATGCACTTT+TGG + chr5_4:21406304-21406323 None:intergenic 30.0%
TTGTTTCAGATACACAAAAC+TGG + chr5_4:21406321-21406340 None:intergenic 30.0%
!! AAAGGATCAAAAGAGGTATT+TGG + chr5_4:21406369-21406388 None:intergenic 30.0%
CAAACTTAAAGGATCAAAAG+AGG + chr5_4:21406376-21406395 None:intergenic 30.0%
GTTTCAAAAAGGTCCTTAAA+AGG + chr5_4:21406478-21406497 None:intergenic 30.0%
TAATGTGTATAAACTTGACC+AGG - chr5_4:21406617-21406636 Msa0843690:CDS 30.0%
!! CAGATGCTTTAAAGGAAAAT+CGG - chr5_4:21406798-21406817 Msa0843690:CDS 30.0%
GTCAATAACGACATTAGATA+TGG - chr5_4:21406820-21406839 Msa0843690:intron 30.0%
GAACTTAGTTATAATCCCAT+TGG - chr5_4:21407097-21407116 Msa0843690:intron 30.0%
TCCATGGAACTTTATAACTT+CGG + chr5_4:21407146-21407165 None:intergenic 30.0%
AATGTGAAAACCCTTAAACT+TGG - chr5_4:21407166-21407185 Msa0843690:intron 30.0%
AGCAATTTACAGGTTAACAT+GGG + chr5_4:21407214-21407233 None:intergenic 30.0%
AAGCAATTTACAGGTTAACA+TGG + chr5_4:21407215-21407234 None:intergenic 30.0%
! GTATTTTGTGTTACAAAGAG+AGG + chr5_4:21407249-21407268 None:intergenic 30.0%
TAATACCACAATATCAGTTC+TGG - chr5_4:21407321-21407340 Msa0843690:intron 30.0%
TGGTGAAGATAGAAAAAAAG+AGG + chr5_4:21407413-21407432 None:intergenic 30.0%
ATTAAATCCTAAATCTAGCG+AGG + chr5_4:21407514-21407533 None:intergenic 30.0%
AAATAGTACCTGACCAAATT+TGG + chr5_4:21407711-21407730 None:intergenic 30.0%
AAAAATCTTTCCGCAGTATA+TGG + chr5_4:21407902-21407921 None:intergenic 30.0%
TTATATTGCATATTAGCTGC+CGG - chr5_4:21407928-21407947 Msa0843690:intron 30.0%
!!! CGATTTTTAGTTCATGAAAC+GGG - chr5_4:21408050-21408069 Msa0843690:intron 30.0%
!!! GATTTTTAGTTCATGAAACG+GGG - chr5_4:21408051-21408070 Msa0843690:intron 30.0%
TGCAAAGAATATACAACAGT+TGG + chr5_4:21408079-21408098 None:intergenic 30.0%
CAATATAACGTTTCATGAAG+TGG - chr5_4:21408163-21408182 Msa0843690:intron 30.0%
TGTACCAATGTATATTCATG+TGG + chr5_4:21408244-21408263 None:intergenic 30.0%
! ATAGCTCTACAGTTCATATT+TGG - chr5_4:21408318-21408337 Msa0843690:CDS 30.0%
AAAGAGAAAGTTAAAGCTAG+GGG - chr5_4:21408421-21408440 Msa0843690:CDS 30.0%
ACATGGTTTACGAAGAATGA+AGG + chr5_4:21398147-21398166 None:intergenic 35.0%
!! AGTGGAAGTGTTTAAAGACA+TGG + chr5_4:21398164-21398183 None:intergenic 35.0%
ATAAGAGAGAGAAACGGTTA+TGG + chr5_4:21398250-21398269 None:intergenic 35.0%
GTTTGGATAAGAGAGAGAAA+CGG + chr5_4:21398256-21398275 None:intergenic 35.0%
GTGTTCTTAGCACTTACTAT+CGG - chr5_4:21398548-21398567 Msa0843690:intron 35.0%
TCACTATTCGATTCATTGCA+TGG - chr5_4:21398574-21398593 Msa0843690:intron 35.0%
TGATATGCATGATGTGGTAA+TGG - chr5_4:21398909-21398928 Msa0843690:CDS 35.0%
ACTAGACATTAGAGAGAGTT+GGG - chr5_4:21399109-21399128 Msa0843690:CDS 35.0%
ATTAAGGAGAGCAGATTAGA+TGG - chr5_4:21399212-21399231 Msa0843690:intron 35.0%
ATTGACATAGCATTATGGCT+TGG - chr5_4:21399317-21399336 Msa0843690:intron 35.0%
! GTATCTAAGATGATAACTGC+AGG - chr5_4:21399616-21399635 Msa0843690:CDS 35.0%
GGTAATTTGATAGGACTCAT+AGG - chr5_4:21399747-21399766 Msa0843690:intron 35.0%
! TTTGAAGTATATGTGCTTCC+TGG - chr5_4:21399801-21399820 Msa0843690:CDS 35.0%
! GTTTTCAGCTTACAGTTATC+TGG - chr5_4:21399916-21399935 Msa0843690:CDS 35.0%
GCTTACAGTTATCTGGAAAT+TGG - chr5_4:21399923-21399942 Msa0843690:CDS 35.0%
TACAGTTATCTGGAAATTGG+TGG - chr5_4:21399926-21399945 Msa0843690:CDS 35.0%
!! ACAAATTTGTTGTCTCAGCT+TGG - chr5_4:21400044-21400063 Msa0843690:intron 35.0%
!! CAAATTTGTTGTCTCAGCTT+GGG - chr5_4:21400045-21400064 Msa0843690:intron 35.0%
!! AAATTTGTTGTCTCAGCTTG+GGG - chr5_4:21400046-21400065 Msa0843690:intron 35.0%
!!! ATCCCTCAAGTTTTTTTGAG+AGG + chr5_4:21400322-21400341 None:intergenic 35.0%
AAATGCATCATTGGAGAGTT+AGG - chr5_4:21400362-21400381 Msa0843690:intron 35.0%
AAAGTCCACTCATATTTGGT+TGG - chr5_4:21400435-21400454 Msa0843690:intron 35.0%
! ATATTTGGTTGGACTGGATT+TGG - chr5_4:21400446-21400465 Msa0843690:intron 35.0%
CATTGTCCCTGTTTATAATG+TGG + chr5_4:21400543-21400562 None:intergenic 35.0%
! GCTTTTGTTCCTCCAAATAA+CGG + chr5_4:21400980-21400999 None:intergenic 35.0%
! GCATACTAATAGTGGAATCA+AGG - chr5_4:21401096-21401115 Msa0843690:intron 35.0%
CAGACTTTCATGACATAACA+TGG + chr5_4:21402213-21402232 None:intergenic 35.0%
! CTGCAATTAGTGATGTGTTT+TGG - chr5_4:21402230-21402249 Msa0843690:intron 35.0%
! GCTGGAATAAAAGCTTTTGA+CGG - chr5_4:21402351-21402370 Msa0843690:intron 35.0%
TACAAACGTGCAAAATAGAG+GGG + chr5_4:21402600-21402619 None:intergenic 35.0%
GTACAAACGTGCAAAATAGA+GGG + chr5_4:21402601-21402620 None:intergenic 35.0%
AGTACAAACGTGCAAAATAG+AGG + chr5_4:21402602-21402621 None:intergenic 35.0%
CACGTTTGTACTAATAGTGA+TGG - chr5_4:21402610-21402629 Msa0843690:intron 35.0%
GTTTGTACTAATAGTGATGG+AGG - chr5_4:21402613-21402632 Msa0843690:intron 35.0%
AGTATCTTGGTTTATCTCCT+AGG + chr5_4:21402941-21402960 None:intergenic 35.0%
ACTCTTTGTATGCACTTGAA+TGG + chr5_4:21403048-21403067 None:intergenic 35.0%
ATACACAAAATGACAACGAC+AGG - chr5_4:21403149-21403168 Msa0843690:intron 35.0%
TTTAGTCCAAGATGCTCAAA+AGG + chr5_4:21403241-21403260 None:intergenic 35.0%
TGTCTATGTGACATACTGAT+GGG - chr5_4:21403449-21403468 Msa0843690:intron 35.0%
GAATACTTCCTATTGACACA+TGG - chr5_4:21403567-21403586 Msa0843690:intron 35.0%
TGCAGAAAAACAATTTCCAG+CGG + chr5_4:21403683-21403702 None:intergenic 35.0%
TCTGCACATCTGTAAACAAT+AGG - chr5_4:21403733-21403752 Msa0843690:intron 35.0%
TCTGTAAACAATAGGAAGAC+TGG - chr5_4:21403741-21403760 Msa0843690:intron 35.0%
CTGTAAACAATAGGAAGACT+GGG - chr5_4:21403742-21403761 Msa0843690:intron 35.0%
TTGTTGATATGGACATAGAG+AGG - chr5_4:21403766-21403785 Msa0843690:intron 35.0%
!! CGCTTTCGAGTTAAGTTTAT+AGG - chr5_4:21404167-21404186 Msa0843690:intron 35.0%
CAAAGAGATTCAGTCACTAT+TGG + chr5_4:21404282-21404301 None:intergenic 35.0%
AGAGAGAGATAGAGAATGTT+AGG - chr5_4:21404347-21404366 Msa0843690:CDS 35.0%
TTAGGTTCAAAGAAATCTGG+TGG - chr5_4:21404365-21404384 Msa0843690:CDS 35.0%
TAACTACCGCTAGATTTATC+CGG + chr5_4:21404557-21404576 None:intergenic 35.0%
GAATACTTCCTATTGACACA+TGG + chr5_4:21403567-21403586 None:intergenic 35.0%
!!! AGTCAGAACATAGTTTTGTG+TGG + chr5_4:21404801-21404820 None:intergenic 35.0%
AGCAATTATCAGTGCAATGT+AGG + chr5_4:21404936-21404955 None:intergenic 35.0%
TGAAGAAAAATTCGAGCTTG+CGG - chr5_4:21404996-21405015 Msa0843690:intron 35.0%
AACTGTAACACTATGTCTTC+TGG - chr5_4:21405222-21405241 Msa0843690:intron 35.0%
CATTCCCTTGATTTCAAACA+AGG + chr5_4:21405272-21405291 None:intergenic 35.0%
TATAAGGCTGTCCATTTCAT+TGG + chr5_4:21405504-21405523 None:intergenic 35.0%
AATTGCACAGTTAGATCAAG+GGG + chr5_4:21405579-21405598 None:intergenic 35.0%
GAATTGCACAGTTAGATCAA+GGG + chr5_4:21405580-21405599 None:intergenic 35.0%
TGAATTGCACAGTTAGATCA+AGG + chr5_4:21405581-21405600 None:intergenic 35.0%
CATTTGCACGGAAATTCTAT+TGG - chr5_4:21405794-21405813 Msa0843690:intron 35.0%
GGAAATTCTATTGGAGATGA+AGG - chr5_4:21405803-21405822 Msa0843690:intron 35.0%
AACAACTCATTGACAGCTAA+AGG - chr5_4:21405990-21406009 Msa0843690:intron 35.0%
TCACGTGAAGTATGTGAAAT+AGG + chr5_4:21406119-21406138 None:intergenic 35.0%
! AATACACCGATACCCTTTTA+AGG - chr5_4:21406462-21406481 Msa0843690:intron 35.0%
! AAAGGTCCTTAAAAGGGTAT+CGG + chr5_4:21406471-21406490 None:intergenic 35.0%
TGAAAATATGAAGGGAAAGC+CGG + chr5_4:21406694-21406713 None:intergenic 35.0%
CTATACAGAAACAAACACAG+AGG + chr5_4:21406857-21406876 None:intergenic 35.0%
GGAAATAACATTCATGCTGT+TGG - chr5_4:21406938-21406957 Msa0843690:intron 35.0%
AAACCAGAAAGTGATTCTTG+GGG + chr5_4:21407018-21407037 None:intergenic 35.0%
CAAACCAGAAAGTGATTCTT+GGG + chr5_4:21407019-21407038 None:intergenic 35.0%
ACAAACCAGAAAGTGATTCT+TGG + chr5_4:21407020-21407039 None:intergenic 35.0%
! TAAGGGTTTTCACATTTCCA+TGG + chr5_4:21407162-21407181 None:intergenic 35.0%
TGAAAACCCTTAAACTTGGT+TGG - chr5_4:21407170-21407189 Msa0843690:intron 35.0%
GCAATTTACAGGTTAACATG+GGG + chr5_4:21407213-21407232 None:intergenic 35.0%
GTGCATTTCAAGCAATTTAC+AGG + chr5_4:21407224-21407243 None:intergenic 35.0%
CACAAAATACTTACGCAGAT+AGG - chr5_4:21407259-21407278 Msa0843690:intron 35.0%
TAAGTCCAGAACTGATATTG+TGG + chr5_4:21407329-21407348 None:intergenic 35.0%
GATCAGTCGAAAAAATGACT+CGG + chr5_4:21407391-21407410 None:intergenic 35.0%
TTTCCTTACCAAATTTGGTC+AGG - chr5_4:21407700-21407719 Msa0843690:intron 35.0%
TTTCAGTCATCTCAAACACA+TGG + chr5_4:21407847-21407866 None:intergenic 35.0%
! TGTGTTTGAGATGACTGAAA+AGG - chr5_4:21407847-21407866 Msa0843690:intron 35.0%
AAGGAAATTGCCATATACTG+CGG - chr5_4:21407889-21407908 Msa0843690:intron 35.0%
GGTTAGAAAAGTTATTCCAG+AGG - chr5_4:21408184-21408203 Msa0843690:intron 35.0%
! TCAAAAGGCATGTATTGAGA+TGG - chr5_4:21408460-21408479 Msa0843690:intron 35.0%
GCAAAAAATTTACACTGCAG+AGG + chr5_4:21408547-21408566 None:intergenic 35.0%
!!! GCAGTGTAAATTTTTTGCAG+TGG - chr5_4:21408549-21408568 Msa0843690:CDS 35.0%
CACCGAATCCAAATCTAAAA+TGG + chr5_4:21408681-21408700 None:intergenic 35.0%
!! GTTTGGTGGTGTTCTTTGTT+GGG + chr5_4:21398001-21398020 None:intergenic 40.0%
TTACGAAGAATGAAGGAGCA+TGG + chr5_4:21398140-21398159 None:intergenic 40.0%
AGTTAGTAACTTACTTGCGG+CGG + chr5_4:21398211-21398230 None:intergenic 40.0%
CTCTCTTATCCAAACCCTAA+CGG - chr5_4:21398261-21398280 Msa0843690:intron 40.0%
GAAAGAGAGAGAAACCGTTA+GGG + chr5_4:21398278-21398297 None:intergenic 40.0%
! TTCTAGAAGCTTCGTGGTTA+AGG - chr5_4:21398406-21398425 Msa0843690:intron 40.0%
AGTGCTAAGAACACTCCAAA+CGG + chr5_4:21398542-21398561 None:intergenic 40.0%
ACACTTACACTACACTGACA+CGG - chr5_4:21398660-21398679 Msa0843690:intron 40.0%
!! GCATGATGTGGTAATGGTAT+TGG - chr5_4:21398915-21398934 Msa0843690:CDS 40.0%
GACTAGACATTAGAGAGAGT+TGG - chr5_4:21399108-21399127 Msa0843690:CDS 40.0%
CTAGACATTAGAGAGAGTTG+GGG - chr5_4:21399110-21399129 Msa0843690:CDS 40.0%
TGGTTGAAACTCAGCTTAGA+TGG - chr5_4:21399154-21399173 Msa0843690:intron 40.0%
GAGGATAGTTGAATCACTAG+AGG - chr5_4:21399234-21399253 Msa0843690:CDS 40.0%
!! GAGTGTTGGCGACATTAATT+AGG - chr5_4:21399376-21399395 Msa0843690:intron 40.0%
CTTCAAAATGTCTGGCATAC+TGG + chr5_4:21399788-21399807 None:intergenic 40.0%
!! GACTTTGATTGCTTTGGAGT+TGG + chr5_4:21399966-21399985 None:intergenic 40.0%
CTGCTTCACAAGGATTGAAA+TGG - chr5_4:21400006-21400025 Msa0843690:intron 40.0%
! TTGAAATGGTCTTTTGCTGC+TGG - chr5_4:21400020-21400039 Msa0843690:intron 40.0%
TACTGATATGTCAGGTATGC+TGG - chr5_4:21400136-21400155 Msa0843690:intron 40.0%
TCATTGTACCATCCATGGAT+TGG - chr5_4:21400255-21400274 Msa0843690:intron 40.0%
CATTGTACCATCCATGGATT+GGG - chr5_4:21400256-21400275 Msa0843690:intron 40.0%
AAATTGAGAGACCCAATCCA+TGG + chr5_4:21400270-21400289 None:intergenic 40.0%
AATGAAGGATAGTAGGTACC+TGG + chr5_4:21400877-21400896 None:intergenic 40.0%
ATTGTGGTATATGCCTGTAC+GGG + chr5_4:21400936-21400955 None:intergenic 40.0%
GATTGTGGTATATGCCTGTA+CGG + chr5_4:21400937-21400956 None:intergenic 40.0%
TCATTGCTTCCGTTATTTGG+AGG - chr5_4:21400968-21400987 Msa0843690:intron 40.0%
AGTCAGTTACATGAGTCCAA+TGG + chr5_4:21401061-21401080 None:intergenic 40.0%
ACTTGTAGCTTATAGTTGGC+TGG - chr5_4:21401674-21401693 Msa0843690:intron 40.0%
CCTAAGTGATAACAGACCTT+CGG + chr5_4:21401802-21401821 None:intergenic 40.0%
! AAAATGTGCTTGTTGGAAGC+TGG - chr5_4:21402163-21402182 Msa0843690:intron 40.0%
! GAAGTGAGTTTTGCTGCAAA+TGG - chr5_4:21402318-21402337 Msa0843690:intron 40.0%
CTGAAGACTCTTGATCTTTC+AGG - chr5_4:21402396-21402415 Msa0843690:intron 40.0%
! TTATTTCGGGTGGTTAGTTG+AGG + chr5_4:21402550-21402569 None:intergenic 40.0%
CAAAATGACAACGACAGGAA+TGG - chr5_4:21403154-21403173 Msa0843690:intron 40.0%
GTGTCTATGTGACATACTGA+TGG - chr5_4:21403448-21403467 Msa0843690:intron 40.0%
GTTTAGCTGAAGCTTCTCAA+TGG + chr5_4:21403483-21403502 None:intergenic 40.0%
GGTCATTTCCATGTGTCAAT+AGG + chr5_4:21404626-21404645 None:intergenic 40.0%
AAATGACCAAATTACCCCCA+CGG - chr5_4:21403590-21403609 Msa0843690:intron 40.0%
GAAGACTGGGATTGTTGATA+TGG - chr5_4:21403755-21403774 Msa0843690:intron 40.0%
TTGATATGGACATAGAGAGG+AGG - chr5_4:21403769-21403788 Msa0843690:intron 40.0%
! GCTCACTAACCAGATTTGTT+TGG - chr5_4:21404232-21404251 Msa0843690:intron 40.0%
! TTTGCTGTGTTGGTATACAG+CGG - chr5_4:21404518-21404537 Msa0843690:intron 40.0%
ATCTAGCGGTAGTTAACTAC+CGG - chr5_4:21404562-21404581 Msa0843690:intron 40.0%
AAACGGTAGTTAACTACCGT+TGG - chr5_4:21404594-21404613 Msa0843690:intron 40.0%
AACGGTAGTTAACTACCGTT+GGG - chr5_4:21404595-21404614 Msa0843690:intron 40.0%
AATGACCAAAATACCCCCAA+CGG + chr5_4:21404613-21404632 None:intergenic 40.0%
GGTCATTTCCATGTGTCAAT+AGG - chr5_4:21404626-21404645 Msa0843690:intron 40.0%
CAGTGCAATGTAGGAGAAAA+TGG + chr5_4:21404927-21404946 None:intergenic 40.0%
GAAGAAAAATTCGAGCTTGC+GGG - chr5_4:21404997-21405016 Msa0843690:intron 40.0%
ACGCATGGGAAAAATGCATA+CGG + chr5_4:21405056-21405075 None:intergenic 40.0%
TGTTTCTTGGATTTGGAGGT+AGG - chr5_4:21405129-21405148 Msa0843690:intron 40.0%
GTTTCTTGGATTTGGAGGTA+GGG - chr5_4:21405130-21405149 Msa0843690:intron 40.0%
TTTCTTGGATTTGGAGGTAG+GGG - chr5_4:21405131-21405150 Msa0843690:intron 40.0%
TTCGATTCAAGTGGCAACTA+TGG - chr5_4:21405396-21405415 Msa0843690:intron 40.0%
TTGAGGGCAACAAGTCTATA+AGG - chr5_4:21405454-21405473 Msa0843690:intron 40.0%
TGAGGGCAACAAGTCTATAA+GGG - chr5_4:21405455-21405474 Msa0843690:intron 40.0%
TTGAAGCGTATCTGGCTAAA+TGG - chr5_4:21405725-21405744 Msa0843690:intron 40.0%
! GGAATTCGTTCTTTGATGAC+TGG - chr5_4:21405824-21405843 Msa0843690:intron 40.0%
ACTGGATTAACGTCACATAG+AGG - chr5_4:21405842-21405861 Msa0843690:intron 40.0%
!! AAAGGTGCTTTCTATGTTGC+TGG - chr5_4:21406008-21406027 Msa0843690:intron 40.0%
! AAGGTGCTTTCTATGTTGCT+GGG - chr5_4:21406009-21406028 Msa0843690:intron 40.0%
!! CATGAATGACATTGGTGATG+AGG - chr5_4:21406073-21406092 Msa0843690:intron 40.0%
TGAACTCTCACACTTTGTAC+TGG + chr5_4:21406167-21406186 None:intergenic 40.0%
CAAACTAAAAGGACCAGAAG+AGG - chr5_4:21406580-21406599 Msa0843690:intron 40.0%
!! AAAGGACCAGAAGAGGTATT+TGG - chr5_4:21406587-21406606 Msa0843690:intron 40.0%
TTTAGGCCAAATACCTCTTC+TGG + chr5_4:21406596-21406615 None:intergenic 40.0%
AAACTTGACCAGGAGAAGAA+TGG - chr5_4:21406627-21406646 Msa0843690:CDS 40.0%
! AATGGATAGATGGTGGTTGT+TGG - chr5_4:21406645-21406664 Msa0843690:CDS 40.0%
TAAGGACAATCCTGAGAAAC+CGG - chr5_4:21406672-21406691 Msa0843690:CDS 40.0%
AACATTCATGCTGTTGGAGT+TGG - chr5_4:21406944-21406963 Msa0843690:intron 40.0%
ACCTGCGTCAGAATATACAA+AGG + chr5_4:21407056-21407075 None:intergenic 40.0%
GAACTTTATAACTTCGGCCA+AGG + chr5_4:21407140-21407159 None:intergenic 40.0%
GCCGAAGTTATAAAGTTCCA+TGG - chr5_4:21407142-21407161 Msa0843690:intron 40.0%
TTACGCAGATAGGAGCAAAA+GGG - chr5_4:21407269-21407288 Msa0843690:intron 40.0%
GCTGTCACATCTCTAAACAT+TGG - chr5_4:21407671-21407690 Msa0843690:intron 40.0%
GTACCTGACCAAATTTGGTA+AGG + chr5_4:21407706-21407725 None:intergenic 40.0%
GTACAAGTGAGCAAATGCAA+AGG + chr5_4:21407743-21407762 None:intergenic 40.0%
GGGTCAACTGTCTCATTAAA+TGG + chr5_4:21408103-21408122 None:intergenic 40.0%
GCTCTACAGTTCATATTTGG+CGG - chr5_4:21408321-21408340 Msa0843690:CDS 40.0%
CTCTACAGTTCATATTTGGC+GGG - chr5_4:21408322-21408341 Msa0843690:CDS 40.0%
CTGGAACAAAAGTGAATCAG+TGG + chr5_4:21408583-21408602 None:intergenic 40.0%
!! CTGATTCACTTTTGTTCCAG+TGG - chr5_4:21408583-21408602 Msa0843690:exon 40.0%
TTTGACTGCATGCAGAATCA+TGG - chr5_4:21408704-21408723 Msa0843690:five_prime_UTR 40.0%
AATGTCCGATCAAGATCGTA+AGG - chr5_4:21408734-21408753 Msa0843690:five_prime_UTR 40.0%
! AGATCGTAAGGTGCAGATTT+TGG - chr5_4:21408746-21408765 Msa0843690:five_prime_UTR 40.0%
!! GGTTTGGTGGTGTTCTTTGT+TGG + chr5_4:21398002-21398021 None:intergenic 45.0%
AAGGAGAACGACTAGAGGTT+TGG + chr5_4:21398018-21398037 None:intergenic 45.0%
GAAGAAAGGAGAACGACTAG+AGG + chr5_4:21398023-21398042 None:intergenic 45.0%
! GTAGAGTGTCTCGAGAAGAA+AGG + chr5_4:21398037-21398056 None:intergenic 45.0%
AGAGAGAAACCGTTAGGGTT+TGG + chr5_4:21398273-21398292 None:intergenic 45.0%
CGAAAGAGAGAGAAACCGTT+AGG + chr5_4:21398279-21398298 None:intergenic 45.0%
AAGGATAACGAATTGGACGG+TGG + chr5_4:21398345-21398364 None:intergenic 45.0%
CGGAAGGATAACGAATTGGA+CGG + chr5_4:21398348-21398367 None:intergenic 45.0%
GAGTCGGAAGGATAACGAAT+TGG + chr5_4:21398352-21398371 None:intergenic 45.0%
CTCCTAAACCAAACGGTCTT+CGG + chr5_4:21398382-21398401 None:intergenic 45.0%
GAACCTGCTCCTAAACCAAA+CGG + chr5_4:21398389-21398408 None:intergenic 45.0%
CTGGACACACTTTCAATCAG+AGG - chr5_4:21398770-21398789 Msa0843690:intron 45.0%
! GAAATTGCAACTAGTGGGTG+AGG - chr5_4:21399041-21399060 Msa0843690:intron 45.0%
AAGGAGAGCAGATTAGATGG+AGG - chr5_4:21399215-21399234 Msa0843690:intron 45.0%
AGTTGAATCACTAGAGGCAG+AGG - chr5_4:21399240-21399259 Msa0843690:CDS 45.0%
GTTATCTAAAAGGCCTCCCT+AGG + chr5_4:21399660-21399679 None:intergenic 45.0%
! GAATTCCCTTGGTTTGAGCA+GGG + chr5_4:21399707-21399726 None:intergenic 45.0%
! AGAATTCCCTTGGTTTGAGC+AGG + chr5_4:21399708-21399727 None:intergenic 45.0%
GCTACACATGAGAATTCCCT+TGG + chr5_4:21399718-21399737 None:intergenic 45.0%
CTCATGTGTAGCTCACTTCT+AGG - chr5_4:21399726-21399745 Msa0843690:intron 45.0%
ATATGTGCTTCCTGGTTGAG+TGG - chr5_4:21399809-21399828 Msa0843690:CDS 45.0%
CAGTAAAACACCACTCAACC+AGG + chr5_4:21399822-21399841 None:intergenic 45.0%
GTCGCAGACTTTGATTGCTT+TGG + chr5_4:21399972-21399991 None:intergenic 45.0%
TCAATCCTTGTGAAGCAGAC+TGG + chr5_4:21400004-21400023 None:intergenic 45.0%
! ATGAGTTTGCTCGAGAACTG+AGG - chr5_4:21400102-21400121 Msa0843690:intron 45.0%
CGTTGTCATTGTACCATCCA+TGG - chr5_4:21400250-21400269 Msa0843690:intron 45.0%
CCAGTCCAACCAAATATGAG+TGG + chr5_4:21400443-21400462 None:intergenic 45.0%
CCACTCATATTTGGTTGGAC+TGG - chr5_4:21400440-21400459 Msa0843690:intron 45.0%
ATTCTTTCTTGCGGAGAGCT+TGG - chr5_4:21400844-21400863 Msa0843690:intron 45.0%
TTCGGCCTGAAAAGACTACA+TGG + chr5_4:21401784-21401803 None:intergenic 45.0%
!! ATGTAGTCTTTTCAGGCCGA+AGG - chr5_4:21401783-21401802 Msa0843690:intron 45.0%
CCGAAGGTCTGTTATCACTT+AGG - chr5_4:21401799-21401818 Msa0843690:intron 45.0%
! GCTTGTTGGAAGCTGGATTT+AGG - chr5_4:21402170-21402189 Msa0843690:intron 45.0%
GCAAATGGAATAACTGCTGC+TGG - chr5_4:21402333-21402352 Msa0843690:intron 45.0%
GATCTTTCAGGCAATCCTGT+TGG - chr5_4:21402408-21402427 Msa0843690:intron 45.0%
TTAGCTCCTTCATCTCCAAC+AGG + chr5_4:21402426-21402445 None:intergenic 45.0%
TGTTGGAGATGAAGGAGCTA+AGG - chr5_4:21402425-21402444 Msa0843690:intron 45.0%
AACTACCCATTGCAAAGGCA+CGG + chr5_4:21403014-21403033 None:intergenic 45.0%
GTTTGAGAGAGAGAGAGAAG+AGG + chr5_4:21403363-21403382 None:intergenic 45.0%
TAGCTGAAGCTTCTCAATGG+TGG + chr5_4:21403480-21403499 None:intergenic 45.0%
!! TCAGCTAAACAGTGCTGACT+TGG - chr5_4:21403493-21403512 Msa0843690:intron 45.0%
!! CAGCTAAACAGTGCTGACTT+GGG - chr5_4:21403494-21403513 Msa0843690:intron 45.0%
!! AGCTAAACAGTGCTGACTTG+GGG - chr5_4:21403495-21403514 Msa0843690:intron 45.0%
TAACTACCGTGGGGGTAATT+TGG + chr5_4:21403599-21403618 None:intergenic 45.0%
ATTACCCCCACGGTAGTTAA+CGG - chr5_4:21403600-21403619 Msa0843690:intron 45.0%
AGGAAACAAACTGCTGCTGT+GGG - chr5_4:21403789-21403808 Msa0843690:intron 45.0%
TGGATTGCAGAGTCAATCTG+TGG - chr5_4:21404385-21404404 Msa0843690:CDS 45.0%
ATTGCAGAGTCAATCTGTGG+AGG - chr5_4:21404388-21404407 Msa0843690:CDS 45.0%
GAGTCAATCTGTGGAGGATT+TGG - chr5_4:21404394-21404413 Msa0843690:CDS 45.0%
TCAATCTGTGGAGGATTTGG+AGG - chr5_4:21404397-21404416 Msa0843690:CDS 45.0%
! TTGGAGGAGTATGCAGAACA+TGG - chr5_4:21404413-21404432 Msa0843690:CDS 45.0%
ACTACCGGCGCTTTAACAAA+CGG - chr5_4:21404577-21404596 Msa0843690:intron 45.0%
! ACTACCGTTTGTTAAAGCGC+CGG + chr5_4:21404584-21404603 None:intergenic 45.0%
ACGGTAGTTAACTACCGTTG+GGG - chr5_4:21404596-21404615 Msa0843690:intron 45.0%
!!! AACTACCGTTGGGGGTATTT+TGG - chr5_4:21404605-21404624 Msa0843690:intron 45.0%
! CTCATAAACCCATTTGGGGT+TGG - chr5_4:21404687-21404706 Msa0843690:intron 45.0%
TGGACTTAGCACACCGAAAT+TGG + chr5_4:21404781-21404800 None:intergenic 45.0%
AATTGCTCACCGTGTTATGC+AGG - chr5_4:21404949-21404968 Msa0843690:intron 45.0%
ATTGCTCACCGTGTTATGCA+GGG - chr5_4:21404950-21404969 Msa0843690:intron 45.0%
! CTTTTGCACCCTGCATAACA+CGG + chr5_4:21404961-21404980 None:intergenic 45.0%
GATTCAAGTGGCAACTATGG+TGG - chr5_4:21405399-21405418 Msa0843690:intron 45.0%
!! TGCATTGGCTAAAGCACTTG+AGG - chr5_4:21405437-21405456 Msa0843690:intron 45.0%
!! GCATTGGCTAAAGCACTTGA+GGG - chr5_4:21405438-21405457 Msa0843690:intron 45.0%
! ACTAGCACCCAACTTTTGTC+AGG + chr5_4:21405658-21405677 None:intergenic 45.0%
TTAGCCAGATACGCTTCAAG+TGG + chr5_4:21405724-21405743 None:intergenic 45.0%
GGACAGGAACTACATTTGCA+CGG - chr5_4:21405782-21405801 Msa0843690:intron 45.0%
CCATCTATCCATTCTTCTCC+TGG + chr5_4:21406638-21406657 None:intergenic 45.0%
CCAGGAGAAGAATGGATAGA+TGG - chr5_4:21406635-21406654 Msa0843690:CDS 45.0%
GGAGAAGAATGGATAGATGG+TGG - chr5_4:21406638-21406657 Msa0843690:CDS 45.0%
! ATGGTGGTTGTTGGTCTGTA+AGG - chr5_4:21406654-21406673 Msa0843690:CDS 45.0%
AAGCCCCAAGAATCACTTTC+TGG - chr5_4:21407012-21407031 Msa0843690:intron 45.0%
GCCTTTGTATATTCTGACGC+AGG - chr5_4:21407052-21407071 Msa0843690:intron 45.0%
TATAATCCCATTGGCCCAGA+TGG - chr5_4:21407106-21407125 Msa0843690:intron 45.0%
CTGGCACCAACCAAGTTTAA+GGG + chr5_4:21407179-21407198 None:intergenic 45.0%
ACATGGGGTGAAAAGTTACC+TGG + chr5_4:21407198-21407217 None:intergenic 45.0%
CTTACGCAGATAGGAGCAAA+AGG - chr5_4:21407268-21407287 Msa0843690:intron 45.0%
TACGCAGATAGGAGCAAAAG+GGG - chr5_4:21407270-21407289 Msa0843690:intron 45.0%
AAAAGGGGCAGAGTTCATTG+CGG - chr5_4:21407285-21407304 Msa0843690:intron 45.0%
! GTTCTGGACTTACGAGCAAA+TGG - chr5_4:21407337-21407356 Msa0843690:intron 45.0%
GCTCTAACCTCGCTAGATTT+AGG - chr5_4:21407504-21407523 Msa0843690:intron 45.0%
TTCGTCTTCGTCAAACTCAC+AGG - chr5_4:21407598-21407617 Msa0843690:intron 45.0%
TCGTCAAACTCACAGGATGA+TGG - chr5_4:21407605-21407624 Msa0843690:intron 45.0%
TTTGTTCCAGTGGATCACAC+AGG - chr5_4:21408593-21408612 Msa0843690:exon 45.0%
TTCAATCCTGTGTGATCCAC+TGG + chr5_4:21408602-21408621 None:intergenic 45.0%
AGTGGATCACACAGGATTGA+AGG - chr5_4:21408601-21408620 Msa0843690:five_prime_UTR 45.0%
GTGGATCACACAGGATTGAA+GGG - chr5_4:21408602-21408621 Msa0843690:five_prime_UTR 45.0%
! TTTTTCACTGGAGTGACCAG+TGG + chr5_4:21408637-21408656 None:intergenic 45.0%
CTGCACCTTACGATCTTGAT+CGG + chr5_4:21408742-21408761 None:intergenic 45.0%
!! AAACAAATTAAAATAAAATT+TGG + chr5_4:21405114-21405133 None:intergenic 5.0%
GAGAACGACTAGAGGTTTGG+TGG + chr5_4:21398015-21398034 None:intergenic 50.0%
GTGTGCGTAAAGAGAGAGAG+TGG + chr5_4:21398182-21398201 None:intergenic 50.0%
TAACTTACTTGCGGCGGTTG+CGG + chr5_4:21398205-21398224 None:intergenic 50.0%
AACGAATTGGACGGTGGTTC+CGG + chr5_4:21398339-21398358 None:intergenic 50.0%
! AGACCGTTTGGTTTAGGAGC+AGG - chr5_4:21398383-21398402 Msa0843690:intron 50.0%
!! AGCAGGTTCTAGAAGCTTCG+TGG - chr5_4:21398400-21398419 Msa0843690:intron 50.0%
GAGAGTTTATCGCGAGTCTC+AGG - chr5_4:21398463-21398482 Msa0843690:intron 50.0%
AGTTTATCGCGAGTCTCAGG+CGG - chr5_4:21398466-21398485 Msa0843690:intron 50.0%
TGCAACGCTTTCGGTTGCTT+CGG - chr5_4:21398490-21398509 Msa0843690:intron 50.0%
TCCAAACGGAGCAACATTCG+TGG + chr5_4:21398528-21398547 None:intergenic 50.0%
! TGACACGGACAAGTTGACAC+CGG - chr5_4:21398675-21398694 Msa0843690:intron 50.0%
TGTCTGTGTCTGTCAGTGTC+AGG - chr5_4:21398742-21398761 Msa0843690:intron 50.0%
! ATCAGAGGCGTATGTGCTAC+AGG - chr5_4:21398785-21398804 Msa0843690:intron 50.0%
!! GGACTGTGGTGCTGATAATG+AGG - chr5_4:21399062-21399081 Msa0843690:CDS 50.0%
AGGATGCTGCGTTAGATGTG+TGG - chr5_4:21399082-21399101 Msa0843690:CDS 50.0%
CAGCACCTTGTGTCTTCCTA+GGG - chr5_4:21399641-21399660 Msa0843690:CDS 50.0%
TGAGCAGGGTCACGTGTTAA+GGG + chr5_4:21399693-21399712 None:intergenic 50.0%
TTGAGCAGGGTCACGTGTTA+AGG + chr5_4:21399694-21399713 None:intergenic 50.0%
GAAAGCCAGTCTGCTTCACA+AGG - chr5_4:21399996-21400015 Msa0843690:intron 50.0%
GATATGTCAGGTATGCTGGC+TGG - chr5_4:21400140-21400159 Msa0843690:intron 50.0%
TGAGAGACCCAATCCATGGA+TGG + chr5_4:21400266-21400285 None:intergenic 50.0%
!! GGGCGCAATTTTGGAGATGA+AGG - chr5_4:21400818-21400837 Msa0843690:intron 50.0%
GGAGAGCTTGGCATTTAACC+AGG - chr5_4:21400856-21400875 Msa0843690:intron 50.0%
GGCAATCCTGTTGGAGATGA+AGG - chr5_4:21402417-21402436 Msa0843690:intron 50.0%
AACCTACCGTGCCTTTGCAA+TGG - chr5_4:21403005-21403024 Msa0843690:intron 50.0%
ACCTACCGTGCCTTTGCAAT+GGG - chr5_4:21403006-21403025 Msa0843690:intron 50.0%
GAGAGAGAGAGAGAAGAGGT+AGG + chr5_4:21403359-21403378 None:intergenic 50.0%
!! GCTAAACAGTGCTGACTTGG+GGG - chr5_4:21403496-21403515 Msa0843690:intron 50.0%
ACTACCGGCGCTTTAATCAG+CGG + chr5_4:21403626-21403645 None:intergenic 50.0%
GAGGAAACAAACTGCTGCTG+TGG - chr5_4:21403788-21403807 Msa0843690:intron 50.0%
! GCTGCTGTGGGTTGTTCATT+TGG - chr5_4:21403801-21403820 Msa0843690:intron 50.0%
CTACCGCCGGATAAATCTAG+CGG - chr5_4:21404548-21404567 Msa0843690:intron 50.0%
CTACCGCTAGATTTATCCGG+CGG + chr5_4:21404554-21404573 None:intergenic 50.0%
CGGTAGTTAACTACCGTTGG+GGG - chr5_4:21404597-21404616 Msa0843690:intron 50.0%
ATCGAACCTGAGACCTTGAG+AGG + chr5_4:21404747-21404766 None:intergenic 50.0%
! ATTCCCCCTGGTGCCAATTT+CGG - chr5_4:21404765-21404784 Msa0843690:intron 50.0%
!! ACTGGATCCCTCGGATTAGT+CGG - chr5_4:21404854-21404873 Msa0843690:intron 50.0%
GAGGTAGGGGTTTACAAGTC+TGG - chr5_4:21405144-21405163 Msa0843690:intron 50.0%
TAGGGGTTTACAAGTCTGGC+TGG - chr5_4:21405148-21405167 Msa0843690:intron 50.0%
! TGGCAACTATGGTGGTGCTT+TGG - chr5_4:21405407-21405426 Msa0843690:intron 50.0%
! GGCAACTATGGTGGTGCTTT+GGG - chr5_4:21405408-21405427 Msa0843690:intron 50.0%
! GCAACTATGGTGGTGCTTTG+GGG - chr5_4:21405409-21405428 Msa0843690:intron 50.0%
! CAACTATGGTGGTGCTTTGG+GGG - chr5_4:21405410-21405429 Msa0843690:intron 50.0%
!! TGCTTTGGGGGCTAATGCAT+TGG - chr5_4:21405422-21405441 Msa0843690:intron 50.0%
!! ACTTCTGGAATACCGCACCT+TGG - chr5_4:21405546-21405565 Msa0843690:intron 50.0%
!! CTTCTGGAATACCGCACCTT+GGG - chr5_4:21405547-21405566 Msa0843690:intron 50.0%
GCATCCACTTGAAGCGTATC+TGG - chr5_4:21405717-21405736 Msa0843690:intron 50.0%
TAATTCTTGGGGCCAGAGCA+GGG + chr5_4:21406898-21406917 None:intergenic 50.0%
TTAATTCTTGGGGCCAGAGC+AGG + chr5_4:21406899-21406918 None:intergenic 50.0%
GTGATTCTTGGGGCTTACAG+TGG + chr5_4:21407008-21407027 None:intergenic 50.0%
TATAACTTCGGCCAAGGCCT+TGG + chr5_4:21407134-21407153 None:intergenic 50.0%
CCTGGCACCAACCAAGTTTA+AGG + chr5_4:21407180-21407199 None:intergenic 50.0%
! CCTTAAACTTGGTTGGTGCC+AGG - chr5_4:21407177-21407196 Msa0843690:intron 50.0%
ATTGCAGGGTGCATTGTGTC+TGG - chr5_4:21407455-21407474 Msa0843690:intron 50.0%
GAACGAGCTCTTACCAGTAC+TGG + chr5_4:21407954-21407973 None:intergenic 50.0%
!! CTGTGCAGTGGGTTTTTCAC+TGG + chr5_4:21408649-21408668 None:intergenic 50.0%
CAGTGAAAAACCCACTGCAC+AGG - chr5_4:21408647-21408666 Msa0843690:five_prime_UTR 50.0%
GGAAACAGATCCTGTGCAGT+GGG + chr5_4:21408660-21408679 None:intergenic 50.0%
TGGAAACAGATCCTGTGCAG+TGG + chr5_4:21408661-21408680 None:intergenic 50.0%
AACTTACTTGCGGCGGTTGC+GGG + chr5_4:21398204-21398223 None:intergenic 55.0%
TTCCGGCAAGCGATTGCAAC+CGG + chr5_4:21398322-21398341 None:intergenic 55.0%
TTCGGCGATTCAGAGTCGGA+AGG + chr5_4:21398364-21398383 None:intergenic 55.0%
GGTCTTCGGCGATTCAGAGT+CGG + chr5_4:21398368-21398387 None:intergenic 55.0%
CTGAATCGCCGAAGACCGTT+TGG - chr5_4:21398371-21398390 Msa0843690:intron 55.0%
! CGCCGAAGACCGTTTGGTTT+AGG - chr5_4:21398377-21398396 Msa0843690:intron 55.0%
CGAACTTCGACACGTGCTTC+TGG - chr5_4:21398434-21398453 Msa0843690:intron 55.0%
!! CGACACGTGCTTCTGGTTCT+CGG - chr5_4:21398441-21398460 Msa0843690:intron 55.0%
TCAGGCGGATGCAACGCTTT+CGG - chr5_4:21398481-21398500 Msa0843690:intron 55.0%
GCCACGAATGTTGCTCCGTT+TGG - chr5_4:21398524-21398543 Msa0843690:intron 55.0%
CTGTGTCTGTCAGTGTCAGG+TGG - chr5_4:21398745-21398764 Msa0843690:intron 55.0%
! AGAGGCGTATGTGCTACAGG+CGG - chr5_4:21398788-21398807 Msa0843690:intron 55.0%
! CAACTAGTGGGTGAGGACTG+TGG - chr5_4:21399048-21399067 Msa0843690:CDS 55.0%
GCAGCACCTTGTGTCTTCCT+AGG - chr5_4:21399640-21399659 Msa0843690:CDS 55.0%
CACCTTGTGTCTTCCTAGGG+AGG - chr5_4:21399644-21399663 Msa0843690:CDS 55.0%
ACGTGACCCTGCTCAAACCA+AGG - chr5_4:21399698-21399717 Msa0843690:intron 55.0%
CGTGACCCTGCTCAAACCAA+GGG - chr5_4:21399699-21399718 Msa0843690:intron 55.0%
TCAGCTTGGGGCGAAGATTG+AGG - chr5_4:21400058-21400077 Msa0843690:intron 55.0%
CAGCTTGGGGCGAAGATTGA+GGG - chr5_4:21400059-21400078 Msa0843690:intron 55.0%
! GATGTGGCAGGGCGCAATTT+TGG - chr5_4:21400809-21400828 Msa0843690:intron 55.0%
AACTGTGGCGTTACCCGTAC+AGG - chr5_4:21400920-21400939 Msa0843690:CDS 55.0%
! ACCCATTGCAAAGGCACGGT+AGG + chr5_4:21403010-21403029 None:intergenic 55.0%
GTCCAGCGGCAGTTAACTAC+CGG + chr5_4:21403641-21403660 None:intergenic 55.0%
AACTACCGCTGAGTGTCCAG+CGG + chr5_4:21403655-21403674 None:intergenic 55.0%
CAGCGGTAGTTAACTACCGC+TGG - chr5_4:21403664-21403683 Msa0843690:intron 55.0%
CCAGCGGTAGTTAACTACCG+TGG + chr5_4:21403667-21403686 None:intergenic 55.0%
CCACGGTAGTTAACTACCGC+TGG - chr5_4:21404471-21404490 Msa0843690:intron 55.0%
CAGCGGTAGTTAACTACCGC+CGG - chr5_4:21403664-21403683 Msa0843690:intron 55.0%
! CTTGAGAGGAGCACACTCCA+AGG + chr5_4:21404733-21404752 None:intergenic 55.0%
CTTGGAGTGTGCTCCTCTCA+AGG - chr5_4:21404731-21404750 Msa0843690:intron 55.0%
TGTGCTCCTCTCAAGGTCTC+AGG - chr5_4:21404738-21404757 Msa0843690:intron 55.0%
ACACCGAAATTGGCACCAGG+GGG + chr5_4:21404771-21404790 None:intergenic 55.0%
CACACCGAAATTGGCACCAG+GGG + chr5_4:21404772-21404791 None:intergenic 55.0%
GCACACCGAAATTGGCACCA+GGG + chr5_4:21404773-21404792 None:intergenic 55.0%
AGCACACCGAAATTGGCACC+AGG + chr5_4:21404774-21404793 None:intergenic 55.0%
AAATGGGGTCCCCACACAAG+TGG - chr5_4:21404823-21404842 Msa0843690:intron 55.0%
CCAAGAGCCGACTAATCCGA+GGG + chr5_4:21404864-21404883 None:intergenic 55.0%
!! CCTCGGATTAGTCGGCTCTT+GGG - chr5_4:21404862-21404881 Msa0843690:intron 55.0%
!! GGATTAGTCGGCTCTTGGGT+TGG - chr5_4:21404866-21404885 Msa0843690:intron 55.0%
! GAAGGGAAAGCCGGTTTCTC+AGG + chr5_4:21406685-21406704 None:intergenic 55.0%
GTATTCTGTGTCCCCTGCTC+TGG - chr5_4:21406883-21406902 Msa0843690:intron 55.0%
AATTCTTGGGGCCAGAGCAG+GGG + chr5_4:21406897-21406916 None:intergenic 55.0%
TTGGCTCCATCTGGGCCAAT+GGG + chr5_4:21407115-21407134 None:intergenic 55.0%
TATTAGCTGCCGGCCAGTAC+TGG - chr5_4:21407938-21407957 Msa0843690:intron 55.0%
!! GAGCTCTTACCAGTACTGGC+CGG + chr5_4:21407950-21407969 None:intergenic 55.0%
CTGTCAGTGTCAGGTGGCAC+TGG - chr5_4:21398751-21398770 Msa0843690:intron 60.0%
GGCCTCCCTAGGAAGACACA+AGG + chr5_4:21399649-21399668 None:intergenic 60.0%
!! CAGTGCTGACTTGGGGGATG+AGG - chr5_4:21403502-21403521 Msa0843690:intron 60.0%
AGCGGCCGTTAACTACCGTG+GGG + chr5_4:21403608-21403627 None:intergenic 60.0%
CAGCGGCCGTTAACTACCGT+GGG + chr5_4:21403609-21403628 None:intergenic 60.0%
TCAGCGGCCGTTAACTACCG+TGG + chr5_4:21403610-21403629 None:intergenic 60.0%
! ACGGCCGCTGATTAAAGCGC+CGG - chr5_4:21403619-21403638 Msa0843690:intron 60.0%
AACTGCCGCTGGACACTCAG+CGG - chr5_4:21403647-21403666 Msa0843690:intron 60.0%
GTCTCAGGTTCGATTCCCCC+TGG - chr5_4:21404753-21404772 Msa0843690:intron 60.0%
TCCCCACACAAGTGGACGGT+GGG - chr5_4:21404831-21404850 Msa0843690:intron 60.0%
TCCCACCGTCCACTTGTGTG+GGG + chr5_4:21404835-21404854 None:intergenic 60.0%
GTCCCACCGTCCACTTGTGT+GGG + chr5_4:21404836-21404855 None:intergenic 60.0%
AGTCCCACCGTCCACTTGTG+TGG + chr5_4:21404837-21404856 None:intergenic 60.0%
ACACAAGTGGACGGTGGGAC+TGG - chr5_4:21404836-21404855 Msa0843690:intron 60.0%
!! CCCTCGGATTAGTCGGCTCT+TGG - chr5_4:21404861-21404880 Msa0843690:intron 60.0%
CCCAAGAGCCGACTAATCCG+AGG + chr5_4:21404865-21404884 None:intergenic 60.0%
CTGGAATACCGCACCTTGGG+CGG - chr5_4:21405550-21405569 Msa0843690:intron 60.0%
CTTGGCTCCATCTGGGCCAA+TGG + chr5_4:21407116-21407135 None:intergenic 60.0%
CATTGGCCCAGATGGAGCCA+AGG - chr5_4:21407114-21407133 Msa0843690:intron 60.0%
CCAAGGCCTTGGCTCCATCT+GGG + chr5_4:21407123-21407142 None:intergenic 60.0%
TGAAGGGCCACGATCACCAC+TGG - chr5_4:21408618-21408637 Msa0843690:five_prime_UTR 60.0%
GGAGTGACCAGTGGTGATCG+TGG + chr5_4:21408628-21408647 None:intergenic 60.0%
TGTAGCTTCGTCTCCGCCGC+CGG - chr5_4:21398300-21398319 Msa0843690:intron 65.0%
CAAGCGATTGCAACCGGCGG+CGG + chr5_4:21398316-21398335 None:intergenic 65.0%
CGGCAAGCGATTGCAACCGG+CGG + chr5_4:21398319-21398338 None:intergenic 65.0%
! CGCCGGTTGCAATCGCTTGC+CGG - chr5_4:21398317-21398336 Msa0843690:intron 65.0%
GCGGCCGTTAACTACCGTGG+GGG + chr5_4:21403607-21403626 None:intergenic 65.0%
CGCCGGTAGTTAACTGCCGC+TGG - chr5_4:21403636-21403655 Msa0843690:intron 65.0%
CCGCTGGGCCAACCCCAAAT+GGG + chr5_4:21404698-21404717 None:intergenic 65.0%
!! CCCATTTGGGGTTGGCCCAG+CGG - chr5_4:21404695-21404714 Msa0843690:intron 65.0%
!! CCATTTGGGGTTGGCCCAGC+GGG - chr5_4:21404696-21404715 Msa0843690:intron 65.0%
!! TTGGCCCAGCGGGTTGGCTT+GGG - chr5_4:21404706-21404725 Msa0843690:intron 65.0%
AGGTCCCAAGCCAACCCGCT+GGG + chr5_4:21404713-21404732 None:intergenic 65.0%
AAGGTCCCAAGCCAACCCGC+TGG + chr5_4:21404714-21404733 None:intergenic 65.0%
!! AGCGGGTTGGCTTGGGACCT+TGG - chr5_4:21404713-21404732 Msa0843690:intron 65.0%
GGGGTCCCCACACAAGTGGA+CGG - chr5_4:21404827-21404846 Msa0843690:intron 65.0%
GTCCCCACACAAGTGGACGG+TGG - chr5_4:21404830-21404849 Msa0843690:intron 65.0%
GACGGTGGGACTGGATCCCT+CGG - chr5_4:21404845-21404864 Msa0843690:intron 65.0%
GAATACCGCACCTTGGGCGG+TGG - chr5_4:21405553-21405572 Msa0843690:intron 65.0%
CCCAGATGGAGCCAAGGCCT+TGG - chr5_4:21407120-21407139 Msa0843690:intron 65.0%
GCCAAGGCCTTGGCTCCATC+TGG + chr5_4:21407124-21407143 None:intergenic 65.0%
CCCGCTGGGCCAACCCCAAA+TGG + chr5_4:21404699-21404718 None:intergenic 70.0%
!! TTGGGGTTGGCCCAGCGGGT+TGG - chr5_4:21404700-21404719 Msa0843690:intron 70.0%
!! GTTGGCCCAGCGGGTTGGCT+TGG - chr5_4:21404705-21404724 Msa0843690:intron 70.0%
GATCAAGGGGCCACCGCCCA+AGG + chr5_4:21405566-21405585 None:intergenic 70.0%
AGGGGCCACCGCCCAAGGTG+CGG + chr5_4:21405561-21405580 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 21397988 21408775 21397988 ID=Msa0843690;Name=Msa0843690
chr5_4 mRNA 21397988 21408775 21397988 ID=Msa0843690-mRNA-1;Parent=Msa0843690;Name=Msa0843690-mRNA-1;_AED=0.18;_eAED=0.18;_QI=175|0.87|0.82|1|0.81|0.76|17|277|580
chr5_4 exon 21397988 21398194 21397988 ID=Msa0843690-mRNA-1:exon:8890;Parent=Msa0843690-mRNA-1
chr5_4 exon 21398804 21398942 21398804 ID=Msa0843690-mRNA-1:exon:8889;Parent=Msa0843690-mRNA-1
chr5_4 exon 21399042 21399143 21399042 ID=Msa0843690-mRNA-1:exon:8888;Parent=Msa0843690-mRNA-1
chr5_4 exon 21399221 21399301 21399221 ID=Msa0843690-mRNA-1:exon:8887;Parent=Msa0843690-mRNA-1
chr5_4 exon 21399391 21399486 21399391 ID=Msa0843690-mRNA-1:exon:8886;Parent=Msa0843690-mRNA-1
chr5_4 exon 21399565 21399669 21399565 ID=Msa0843690-mRNA-1:exon:8885;Parent=Msa0843690-mRNA-1
chr5_4 exon 21399754 21399981 21399754 ID=Msa0843690-mRNA-1:exon:8884;Parent=Msa0843690-mRNA-1
chr5_4 exon 21400669 21400799 21400669 ID=Msa0843690-mRNA-1:exon:8883;Parent=Msa0843690-mRNA-1
chr5_4 exon 21400900 21400975 21400900 ID=Msa0843690-mRNA-1:exon:8882;Parent=Msa0843690-mRNA-1
chr5_4 exon 21401287 21401356 21401287 ID=Msa0843690-mRNA-1:exon:8881;Parent=Msa0843690-mRNA-1
chr5_4 exon 21401551 21401612 21401551 ID=Msa0843690-mRNA-1:exon:8880;Parent=Msa0843690-mRNA-1
chr5_4 exon 21404317 21404454 21404317 ID=Msa0843690-mRNA-1:exon:8879;Parent=Msa0843690-mRNA-1
chr5_4 exon 21405886 21405944 21405886 ID=Msa0843690-mRNA-1:exon:8878;Parent=Msa0843690-mRNA-1
chr5_4 exon 21406614 21406832 21406614 ID=Msa0843690-mRNA-1:exon:8877;Parent=Msa0843690-mRNA-1
chr5_4 exon 21408194 21408358 21408194 ID=Msa0843690-mRNA-1:exon:8876;Parent=Msa0843690-mRNA-1
chr5_4 exon 21408371 21408458 21408371 ID=Msa0843690-mRNA-1:exon:8875;Parent=Msa0843690-mRNA-1
chr5_4 exon 21408547 21408775 21408547 ID=Msa0843690-mRNA-1:exon:8874;Parent=Msa0843690-mRNA-1
chr5_4 five_prime_UTR 21408601 21408775 21408601 ID=Msa0843690-mRNA-1:five_prime_utr;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21408547 21408600 21408547 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21408371 21408458 21408371 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21408194 21408358 21408194 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21406614 21406832 21406614 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21405886 21405944 21405886 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21404317 21404454 21404317 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21401551 21401612 21401551 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21401287 21401356 21401287 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21400900 21400975 21400900 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21400669 21400799 21400669 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21399754 21399981 21399754 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21399565 21399669 21399565 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21399391 21399486 21399391 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21399221 21399301 21399221 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21399042 21399143 21399042 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 CDS 21398874 21398942 21398874 ID=Msa0843690-mRNA-1:cds;Parent=Msa0843690-mRNA-1
chr5_4 three_prime_UTR 21398804 21398873 21398804 ID=Msa0843690-mRNA-1:three_prime_utr;Parent=Msa0843690-mRNA-1
chr5_4 three_prime_UTR 21397988 21398194 21397988 ID=Msa0843690-mRNA-1:three_prime_utr;Parent=Msa0843690-mRNA-1
Gene Sequence

>Msa0843690

ATGTCTTTAAACACTTCCACTCTCTCTCTTTACGCACACCCGCAACCGCCGCAACTTCGTCTCCGCCGCCGGTTGCAATCGCTTGCCGGAACCACCGTCCAATTCGTTATCCTTCCGACTCTGAATCGCCGAAGACCGTTTGGTTCTAGAAGCTTCGTGGTTAAGGCTGAACGAACTTCGACACGTGCTTCTGGTTCTCGGAGAGTTTATCGCGAGTCTCAGGCGGATGCAACGCTTTCGGTTGCTTCGGTTAAGCAGATTGCCACGAATGTTGCTCCGTTTGGAGTGTTCTTAGCACTTACTATCGTTATCTGGAAATTGGTGGAGAAGCTTGTTGTTCCAACTCCAAAGCAATCAAAGTCTGCGACAGCTGAAAGCCAGTCTGCTTCACAAGGATTGAAATGGTCTTTTGCTGCTGGTACAAATTTGTTGTCTCAGCTTGGGGCGAAGATTGAGGGCCAATCTAAACAGAAACTGAATGAGTTTGCTCGAGAACTGAGGTCTTTTTCATATACTGATATGTCAGGGCGCAATTTTGGAGATGAAGGATTATTCTTTCTTGCGGAGAGCTTGGCATTTAACCAGATTGCAGAAGAAGTGAGTTTTGCTGCAAATGGAATAACTGCTGCTGGAATAAAAGCTTTTGACGGTGTTCTTCAGTCAAACATCACACTGAAGACTCTTGATCTTTCAGGCAATCCTGTTGGAGATGAAGGAGCTAAGGGGTTTACAAGTCTGGCTGGAGCACTTCTTGAGAATAACAGCATAAGAAATATACATCTCAATGGCAACTATGGTGGTGCTTTGGGGGCTAATGCATTGGCTAAAGCACTTGAGGGCAACAAGTCTATAAGGGAACTACATTTGCACGGAAATTCTATTGGAGATGAAGGAATTCGTTCTTTGATGACTGGATTAACGTCACATAGAGGGAAACTTACACTTCTAGACATAGGCAACAACTCATTGACAGCTAAAGGTGCTTTCTATGTTGCTGGGTATATTAAAAAGATCAAAAGCCTGTTATGGTTGAACATTTACATGAATGACATTGGTGATGAGGGTGCAGAAAAAATTGCAGATGCTTTAAAGGAAAATCGGTCAATAACGACATTAGATATGGTGAAAAGCACTCCTCTGTGTTTGTTTCTGTATAGTTTTGGGTATTCTGTGTCCCCTGCTCTGGCCCCAAGAATTAATAAGTTAAAATTACAGGGAGGAAATAACATTCATGCTGTTGGAGTTGGTGCCGTTGCTAAAGTTTTGAAAGATAATTCAGTTATTACCACTTTAGAACTTAGTTATAATCCCATTGGCCCAGATGGAGCCAAGGCCTTGGCCGAAGTTATAAAGTTCCATGGAAATGTGAAAACCCTTAAACTTGGTTGGTGCCAGATAGGAGCAAAAGGGGCAGAGTTCATTGCGGATGCTTTAAAATATAATACCACAATATCAGTTCTGGACTTACGAGCAAATGGACTTAGAGATGAAGGTGCATTGTGTCTGGCTCGCAGCTTGAAAGTTGTTAATGAAGCTCTAACCTCGCTAGATTTAGGATTTAATGAAATAAGGGATGATGGAGCTTTTGCTATTGCTCAAGCACTCAAATCTAATGAAGATGTTGCTGTCACATCTCTAAACATTGGCAGTAATTTCCTTACCAAATTTGGTCAGAGTGCTTTATCTGATGCAAGAGACCATGTGTTTGAGATGACTGAAAAGGAAATTGCCATCTTTTTCTAA

Protein sequence

>Msa0843690

MSLNTSTLSLYAHPQPPQLRLRRRLQSLAGTTVQFVILPTLNRRRPFGSRSFVVKAERTSTRASGSRRVYRESQADATLSVASVKQIATNVAPFGVFLALTIVIWKLVEKLVVPTPKQSKSATAESQSASQGLKWSFAAGTNLLSQLGAKIEGQSKQKLNEFARELRSFSYTDMSGRNFGDEGLFFLAESLAFNQIAEEVSFAANGITAAGIKAFDGVLQSNITLKTLDLSGNPVGDEGAKGFTSLAGALLENNSIRNIHLNGNYGGALGANALAKALEGNKSIRELHLHGNSIGDEGIRSLMTGLTSHRGKLTLLDIGNNSLTAKGAFYVAGYIKKIKSLLWLNIYMNDIGDEGAEKIADALKENRSITTLDMVKSTPLCLFLYSFGYSVSPALAPRINKLKLQGGNNIHAVGVGAVAKVLKDNSVITTLELSYNPIGPDGAKALAEVIKFHGNVKTLKLGWCQIGAKGAEFIADALKYNTTISVLDLRANGLRDEGALCLARSLKVVNEALTSLDLGFNEIRDDGAFAIAQALKSNEDVAVTSLNIGSNFLTKFGQSALSDARDHVFEMTEKEIAIFF*