AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0229140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0229140 MtrunA17_Chr3g0096061 98.376 862 2 3 1 859 1 853 0.0 1731
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0229140 AT2G38020.1 73.409 880 191 10 1 859 1 858 0.0 1318
Msa0229140 AT2G38020.2 74.061 825 178 7 1 805 1 809 0.0 1263

Find 239 sgRNAs with CRISPR-Local

Find 884 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGTGAAAACAGAATTTA+AGG 0.173476 2_2:-748959 Msa0229140:intron
TGGATGCTGTTCTGCTTTAC+TGG 0.199058 2_2:-756976 Msa0229140:CDS
TTCTCGAGGGTCTGCAAGTT+TGG 0.242669 2_2:+747379 None:intergenic
TGGCAAAAGGTATTGGATTC+TGG 0.251806 2_2:-752372 Msa0229140:CDS
CTTCTTCTCCTATGCTTAAC+AGG 0.253059 2_2:+752463 None:intergenic
CGCGGTGAAGTTGGCTGATC+CGG 0.270998 2_2:-757989 Msa0229140:CDS
AGGCAACCGTTGGAGTTCTT+TGG 0.274994 2_2:-752257 Msa0229140:CDS
CGAATTGATCGAAAATAAAT+AGG 0.276973 2_2:+746388 None:intergenic
CACTCAGGAATAAGAATTAT+TGG 0.279696 2_2:+756893 None:intergenic
TCTTAGTATTCAGCAATATA+AGG 0.297573 2_2:-755307 Msa0229140:intron
CTCCTAAGGGCAGCCAGTTA+TGG 0.308461 2_2:-755582 Msa0229140:CDS
TTGGATAGAGTTCGGGTTTA+CGG 0.313821 2_2:+759367 None:intergenic
ATGTTGCTGATTGTGCGTTT+TGG 0.320723 2_2:-758080 Msa0229140:CDS
AGGATGTGGCATTTCTTCTT+TGG 0.326758 2_2:-749686 Msa0229140:CDS
CCATCGCATTGGATAGAGTT+CGG 0.330714 2_2:+759359 None:intergenic
AAGGACTTCTTCTTATCAAC+AGG 0.338458 2_2:-750131 Msa0229140:CDS
GAATTATTGGTTCGTCATAA+AGG 0.341901 2_2:+756906 None:intergenic
CTGAGACGTTTGCCATTGTT+TGG 0.343002 2_2:+759427 None:intergenic
GATATTGTCCAATGCTAGTA+TGG 0.344621 2_2:-756858 Msa0229140:CDS
TCCTAAGGGCAGCCAGTTAT+GGG 0.348083 2_2:-755581 Msa0229140:CDS
TTCCACCTGTTTAGATGAAC+GGG 0.348566 2_2:+752676 None:intergenic
TCATATTTGGCAAAAGGTAT+TGG 0.349151 2_2:-752379 Msa0229140:CDS
TTGATTCATTCCGAGATATT+CGG 0.351522 2_2:+755137 None:intergenic
AGCAGCATCCGCAGCTTCCT+TGG 0.359277 2_2:+746569 None:intergenic
CATCGCATTGGATAGAGTTC+GGG 0.360048 2_2:+759360 None:intergenic
ACAAAAGGCCTGCCCATAAC+TGG 0.360955 2_2:+755569 None:intergenic
TCTCGAGGGTCTGCAAGTTT+GGG 0.366487 2_2:+747380 None:intergenic
GAAGAGATGGTATTGGCTTA+AGG 0.372569 2_2:-748738 Msa0229140:CDS
TTCCTCCAGAGCAGCTTGCT+TGG 0.373313 2_2:-757006 Msa0229140:CDS
GCCGTGAAGCTGGACGATTT+TGG 0.377662 2_2:+759260 None:intergenic
TGTGGAGCCGCCACGGTGTA+TGG 0.381850 2_2:-757962 Msa0229140:CDS
TTCTTCTTTGGAAAGAATCA+TGG 0.384884 2_2:-749674 Msa0229140:CDS
GAGCCGCAGTATACGGTGTC+TGG 0.388055 2_2:-757931 Msa0229140:CDS
AAAATCGCCGCCGCTCCTTT+CGG 0.388295 2_2:-759312 Msa0229140:CDS
GATGTTGGTGAGCATTTATC+AGG 0.390074 2_2:+755178 None:intergenic
TGCTAATTGTCTGGCCTGTA+TGG 0.391082 2_2:+752232 None:intergenic
CCACACCAAGCAAGCTGCTC+TGG 0.392027 2_2:+757001 None:intergenic
ATCTCCTCGCCGACACCGTC+TGG 0.392057 2_2:-759194 Msa0229140:CDS
TCTAGAGATTCTGCTTGATA+AGG 0.399103 2_2:-752876 Msa0229140:intron
TCAGCCAACTTCACCGCGTT+AGG 0.401454 2_2:+757994 None:intergenic
TCCAAAATCGTCCAGCTTCA+CGG 0.408922 2_2:-759261 Msa0229140:CDS
TGCTAAGATAACTGCGTCAT+TGG 0.410927 2_2:-752918 Msa0229140:CDS
TAGGTAACCGGTTCTCCATC+AGG 0.411163 2_2:+756929 None:intergenic
TGATTCAAAGGTATGTTCCT+TGG 0.412852 2_2:+749557 None:intergenic
GAGCAGACTCGCCGTGAAGC+TGG 0.414617 2_2:+759250 None:intergenic
CGAACCCCGTTCATCTAAAC+AGG 0.421606 2_2:-752681 Msa0229140:intron
ACAGTTTCAATCTTCACAAT+TGG 0.427477 2_2:-756809 Msa0229140:CDS
TCAATGCATGCCTCGACAAA+TGG 0.430793 2_2:+747437 None:intergenic
AACCCCGGCGGTAGGTTAAT+CGG 0.435433 2_2:-759168 Msa0229140:CDS
CTTACACCATCTGTCCTGAT+TGG 0.435960 2_2:-755204 Msa0229140:CDS
CTCTGGCCACAATCAAGGAC+TGG 0.436871 2_2:-748709 Msa0229140:CDS
CAGAAATTCCATACTAGCAT+TGG 0.439342 2_2:+756850 None:intergenic
CAAGCAAGGCAGCTAACTTT+CGG 0.439766 2_2:+752711 None:intergenic
TTACTTGGTGTGGGAGATGG+TGG 0.441418 2_2:-757895 Msa0229140:CDS
GGGAGATGGTGGTGAGGAGG+AGG 0.444591 2_2:-757884 Msa0229140:CDS
TGTTTGGAAGAGTGGGATAG+TGG 0.445628 2_2:+759443 None:intergenic
TGGTGGTGAGGAGGAGGATG+CGG 0.446772 2_2:-757878 Msa0229140:CDS
CATTTATCAGGCGACCAATC+AGG 0.447792 2_2:+755190 None:intergenic
TAGTATGGAATTTCTGCAAC+GGG 0.449925 2_2:-756843 Msa0229140:CDS
TGTCTCTTTGATCATGTAAG+AGG 0.451821 2_2:+746283 None:intergenic
ATGCATTGAAGCAGATGAAA+AGG 0.452861 2_2:-747423 Msa0229140:CDS
TTATTACCTAACGATAGATT+CGG 0.453741 2_2:+759057 None:intergenic
CTTGCGTCATTTACTCATGA+TGG 0.454216 2_2:-757757 Msa0229140:CDS
GGACAGTCGTATGCTCGAAT+TGG 0.456669 2_2:-746597 Msa0229140:intron
GGAGTTCTTTGGAACCATAC+AGG 0.459956 2_2:-752246 Msa0229140:CDS
TGGTGTCACGGGATGGGAAG+TGG 0.460977 2_2:-757780 Msa0229140:CDS
ATTGAACCGAATCTATCGTT+AGG 0.467559 2_2:-759063 Msa0229140:intron
GCCCATAACTGGCTGCCCTT+AGG 0.467629 2_2:+755580 None:intergenic
AATCCGGACTTGTATTGTCC+TGG 0.468046 2_2:-749001 Msa0229140:CDS
CAGCCAACTTCACCGCGTTA+GGG 0.469202 2_2:+757995 None:intergenic
CTCAGCTGCCTTTGATTCAA+AGG 0.470260 2_2:+749545 None:intergenic
GGTTATTGAGCCGCAGTATA+CGG 0.474902 2_2:-757938 Msa0229140:CDS
TAAGTCCCGTGCTAATTGTC+TGG 0.474919 2_2:+752223 None:intergenic
GTTACTACGTCGGATTTGAC+TGG 0.477285 2_2:-757724 Msa0229140:CDS
TTCTAAAACTTACCTATTGG+AGG 0.477730 2_2:+748653 None:intergenic
GACGGTGTGCAGAGGCTTGG+TGG 0.478653 2_2:-757835 Msa0229140:CDS
AAACCCTAACGCGGTGAAGT+TGG 0.478744 2_2:-757998 Msa0229140:CDS
CGCGCCAACGAACTCTCCTA+AGG 0.480577 2_2:-755596 Msa0229140:CDS
TTCACGGCGAGTCTGCTCTT+CGG 0.483301 2_2:-759245 Msa0229140:CDS
GCGGTGAAGTTGGCTGATCC+GGG 0.483726 2_2:-757988 Msa0229140:CDS
AAATCAAGCTTACCTACAAA+AGG 0.483898 2_2:+755554 None:intergenic
GGATGCTGTTCTGCTTTACT+GGG 0.487993 2_2:-756975 Msa0229140:CDS
CAAGTATAAGTGACACAATC+CGG 0.488003 2_2:-749017 Msa0229140:CDS
TGGTCACTTCAAGTTCATGC+TGG 0.488318 2_2:+749064 None:intergenic
AAGGAGAAGAAACCTCCAAT+AGG 0.489908 2_2:-748665 Msa0229140:intron
AAGAGGACCGTTGCAGAAGA+TGG 0.490500 2_2:-757803 Msa0229140:CDS
GATGGGCCCTGATGGAGAAC+CGG 0.492155 2_2:-756936 Msa0229140:CDS
GGAAACACGTCGACCTTGCT+CGG 0.493257 2_2:-759338 Msa0229140:CDS
ACGCAGCTCGATGATTTCCC+AGG 0.493746 2_2:+748983 None:intergenic
TACGAGGAGGCAGAAAAGTC+AGG 0.496988 2_2:+746418 None:intergenic
CCAGAGCAGCTTGCTTGGTG+TGG 0.497588 2_2:-757001 Msa0229140:CDS
TTCCCAGGACAATACAAGTC+CGG 0.498893 2_2:+748998 None:intergenic
CTCGTCTGCGTTGTTCAAGA+TGG 0.501709 2_2:-759120 Msa0229140:CDS
AGCAAGGGATCTCCACTTCA+TGG 0.501761 2_2:-749627 Msa0229140:CDS
TGTGGGAGATGGTGGTGAGG+AGG 0.503509 2_2:-757887 Msa0229140:CDS
CTTCGATTATTCTCCTCCTC+CGG 0.504997 2_2:-759219 Msa0229140:CDS
TGGAGATCCCTTGCTTGCCA+TGG 0.506046 2_2:+749635 None:intergenic
AAGATTGAAACTGTGGAGTC+AGG 0.507333 2_2:+756818 None:intergenic
TGCGGCGGTGATTGCAGTTG+AGG 0.511307 2_2:-757860 Msa0229140:CDS
GGAGATCCCTTGCTTGCCAT+GGG 0.511908 2_2:+749636 None:intergenic
TCGTCATAAAGGTAGGTAAC+CGG 0.512033 2_2:+756917 None:intergenic
TCTTCTTTGGAAAGAATCAT+GGG 0.514000 2_2:-749673 Msa0229140:CDS
GGAACATACCTTTGAATCAA+AGG 0.514086 2_2:-749553 Msa0229140:CDS
AGAAGATACAGCCTTGATGA+AGG 0.515874 2_2:-752445 Msa0229140:CDS
AAGGGCAGCCAGTTATGGGC+AGG 0.516825 2_2:-755577 Msa0229140:CDS
GAGGACGGTGTGCAGAGGCT+TGG 0.516868 2_2:-757838 Msa0229140:CDS
ATGAGCAGCAACTGCTGCAT+AGG 0.517654 2_2:+752751 None:intergenic
AAATGGCGTCGTTTGTATAA+CGG 0.519833 2_2:-758055 Msa0229140:CDS
TGCAGAAGATGGTGGTGTCA+CGG 0.520389 2_2:-757792 Msa0229140:CDS
AAAGGTATTGGATTCTGGAA+AGG 0.522561 2_2:-752367 Msa0229140:intron
TTATATTGCTGAATACTAAG+AGG 0.525483 2_2:+755309 None:intergenic
TCGAATAAAACTTATTGAGA+AGG 0.527366 2_2:-749601 Msa0229140:CDS
CTGCCCTTAGGAGAGTTCGT+TGG 0.528383 2_2:+755592 None:intergenic
GTTGGCTGATCCGGGGATTG+TGG 0.529245 2_2:-757980 Msa0229140:CDS
CGTCATTTACTCATGATGGC+CGG 0.529492 2_2:-757753 Msa0229140:CDS
TTGCCATTGTTTGGAAGAGT+GGG 0.532644 2_2:+759436 None:intergenic
CACCAAGCAAGCTGCTCTGG+AGG 0.533015 2_2:+757004 None:intergenic
TCGACGTGTTTCCATCGCAT+TGG 0.533426 2_2:+759348 None:intergenic
AGATGGTGGTGTCACGGGAT+GGG 0.533613 2_2:-757786 Msa0229140:CDS
GTCGTATGCTCGAATTGGTA+TGG 0.537967 2_2:-746592 Msa0229140:CDS
GGCAGCCCAGTCCTTGATTG+TGG 0.538088 2_2:+748703 None:intergenic
ATTCCGATTAACCTACCGCC+GGG 0.539342 2_2:+759165 None:intergenic
GGGGTTCCGCCAGACGGTGT+CGG 0.539733 2_2:+759185 None:intergenic
ACACATGCTTCAACAGCCTC+AGG 0.541349 2_2:+755648 None:intergenic
TTTGCCATTGTTTGGAAGAG+TGG 0.543062 2_2:+759435 None:intergenic
AGCCGCAGTATACGGTGTCT+GGG 0.544978 2_2:-757930 Msa0229140:CDS
CTGCGTTGTTCAAGATGGAA+CGG 0.545056 2_2:-759115 Msa0229140:CDS
TTTGGAATCGTCGCGGATCA+CGG 0.546524 2_2:+759278 None:intergenic
CGGGGATTGTGGAGCCGCCA+CGG 0.546561 2_2:-757969 Msa0229140:CDS
TGATCAAGGTGGAGAAGACA+TGG 0.547991 2_2:+759485 None:intergenic
ATTCCACCTGTTTAGATGAA+CGG 0.548796 2_2:+752675 None:intergenic
ATCTCTAGAAGAGTAGCATC+GGG 0.550017 2_2:+752890 None:intergenic
GTCTCTTTGATCATGTAAGA+GGG 0.550254 2_2:+746284 None:intergenic
AAGATGGTGGTGTCACGGGA+TGG 0.552664 2_2:-757787 Msa0229140:CDS
GCAGAAGATGGTGGTGTCAC+GGG 0.552876 2_2:-757791 Msa0229140:CDS
TCAAAAGACGGTGAGTTGCT+TGG 0.554692 2_2:-746540 Msa0229140:CDS
TGGTGTGGGAGATGGTGGTG+AGG 0.554808 2_2:-757890 Msa0229140:CDS
GGCGAGGAGATGACCGGAGG+AGG 0.555224 2_2:+759206 None:intergenic
ATCCGGACTTGTATTGTCCT+GGG 0.555622 2_2:-749000 Msa0229140:CDS
TTTATTCGAGGACCATGAAG+TGG 0.556071 2_2:+749615 None:intergenic
TGTCGGAGAAGAGATGGTAT+TGG 0.556366 2_2:-748745 Msa0229140:CDS
TCCTCGCCGACACCGTCTGG+CGG 0.558100 2_2:-759191 Msa0229140:CDS
AAGACGGTGAGTTGCTTGGT+CGG 0.558308 2_2:-746536 Msa0229140:CDS
TACCACATTAACCTCAGATA+AGG 0.558565 2_2:+746332 None:intergenic
ATTCTTATTCCTGAGTGCGA+TGG 0.559064 2_2:-756887 Msa0229140:CDS
TATTGGTTCGTCATAAAGGT+AGG 0.559582 2_2:+756910 None:intergenic
GTTCCTCTCCTGTTAAGCAT+AGG 0.561921 2_2:-752471 Msa0229140:CDS
TCTGGCCACAATCAAGGACT+GGG 0.562575 2_2:-748708 Msa0229140:CDS
CTTGGTGGTGAGATGCTAAG+AGG 0.563154 2_2:-757820 Msa0229140:CDS
AGAAATGTGTAAAATTCTGC+GGG 0.563554 2_2:-755367 Msa0229140:CDS
TGCATTGAAGCAGATGAAAA+GGG 0.563780 2_2:-747422 Msa0229140:CDS
AATCTCTAGAAGAGTAGCAT+CGG 0.563932 2_2:+752889 None:intergenic
AGGAGGTGGTGATAATGCAC+TGG 0.564792 2_2:-752946 Msa0229140:CDS
TGCTCGAATTGGTATGGCCA+AGG 0.566532 2_2:-746586 Msa0229140:CDS
AAGAAATGTGTAAAATTCTG+CGG 0.567717 2_2:-755368 Msa0229140:CDS
TCGTCGCGGATCACGGCGAG+TGG 0.568578 2_2:+759285 None:intergenic
GCAGCTTGCTTGGTGTGGAA+TGG 0.569731 2_2:-756996 Msa0229140:CDS
TCCGCAATGCAAGCAGATGT+TGG 0.571309 2_2:+755163 None:intergenic
GACACCGTCTGGCGGAACCC+CGG 0.572063 2_2:-759183 Msa0229140:CDS
GAGTGGACCGCCGAAAGGAG+CGG 0.572901 2_2:+759302 None:intergenic
ATCCTCACTCCATCGCACTC+AGG 0.575710 2_2:+756878 None:intergenic
ACATTCAGTCGCCTTCATCA+AGG 0.578060 2_2:+752434 None:intergenic
CCGAACTCTATCCAATGCGA+TGG 0.579890 2_2:-759359 Msa0229140:CDS
GCGTCATACAGCAAAGCTGC+GGG 0.580917 2_2:+756776 None:intergenic
ACTTGAAGTGACCACAAAGC+AGG 0.580954 2_2:-749055 Msa0229140:CDS
CTTTGAATCAAAGGCAGCTG+AGG 0.582645 2_2:-749544 Msa0229140:CDS
GATGATGCAGAGGCAACCGT+TGG 0.584115 2_2:-752267 Msa0229140:intron
CTAGTATGGAATTTCTGCAA+CGG 0.584740 2_2:-756844 Msa0229140:CDS
TACAGGTGTCGGAGAAGAGA+TGG 0.586198 2_2:-748751 Msa0229140:intron
TACGGTAGTAACGGTTGTAG+AGG 0.586205 2_2:+759385 None:intergenic
ATCGCCGCCGCTCCTTTCGG+CGG 0.587470 2_2:-759309 Msa0229140:CDS
AGGTTATAGGCCATTTGTCG+AGG 0.587978 2_2:-747447 Msa0229140:CDS
CGTGGCGGCTCCACAATCCC+CGG 0.588150 2_2:+757970 None:intergenic
GGTGTCGGCGAGGAGATGAC+CGG 0.588820 2_2:+759200 None:intergenic
TACGGTGTCTGGGAATGTTG+AGG 0.590077 2_2:-757920 Msa0229140:CDS
GTGATTGCAGTTGAGGAGGA+CGG 0.591821 2_2:-757853 Msa0229140:CDS
TTCCTGAGTGCGATGGAGTG+AGG 0.596415 2_2:-756880 Msa0229140:CDS
TGGACCGCCGAAAGGAGCGG+CGG 0.596652 2_2:+759305 None:intergenic
GTTCGGGTTTACGGTAGTAA+CGG 0.598178 2_2:+759376 None:intergenic
ATGCTTCAACAGCCTCAGGA+AGG 0.598204 2_2:+755652 None:intergenic
TACAGGCCAGACAATTAGCA+CGG 0.598484 2_2:-752229 Msa0229140:CDS
TGGTGAGGAGGAGGATGCGG+CGG 0.599087 2_2:-757875 Msa0229140:CDS
ACCGCCGGGGTTCCGCCAGA+CGG 0.600762 2_2:+759179 None:intergenic
TCTGGCGGAACCCCGGCGGT+AGG 0.600872 2_2:-759176 Msa0229140:CDS
GCAGTGCGCAGCTTTGAGAT+CGG 0.602610 2_2:-755336 Msa0229140:CDS
CATTCCGATTAACCTACCGC+CGG 0.602682 2_2:+759164 None:intergenic
GACACCACCATCTTCTGCAA+CGG 0.602911 2_2:+757796 None:intergenic
TACCTTATCTGAGGTTAATG+TGG 0.602974 2_2:-746334 Msa0229140:three_prime_UTR
AGGCGACCAATCAGGACAGA+TGG 0.604026 2_2:+755198 None:intergenic
ACGGCGAGTGGACCGCCGAA+AGG 0.605300 2_2:+759297 None:intergenic
CTCTTTGATCATGTAAGAGG+GGG 0.605434 2_2:+746286 None:intergenic
ACTTATTTATAACTTATGCA+CGG 0.605925 2_2:-752205 Msa0229140:intron
GAAGCATGTGTTGATGCTGC+AGG 0.606318 2_2:-755636 Msa0229140:CDS
CCGGCTTCTTGTTACTACGT+CGG 0.606461 2_2:-757734 Msa0229140:CDS
AGGTAACCGGTTCTCCATCA+GGG 0.607086 2_2:+756930 None:intergenic
GGCGGTGATTGCAGTTGAGG+AGG 0.608076 2_2:-757857 Msa0229140:CDS
GACTGGTGTTATCATCGAGA+GGG 0.609135 2_2:-757707 Msa0229140:CDS
GGCAAACGTCTCAGTTGCAG+CGG 0.610048 2_2:-759418 Msa0229140:CDS
GTAGGTTAATCGGAATGTCG+TGG 0.613022 2_2:-759158 Msa0229140:CDS
TGCTTCAACAGCCTCAGGAA+GGG 0.613074 2_2:+755653 None:intergenic
TTGAGGAGGACGGTGTGCAG+AGG 0.614752 2_2:-757843 Msa0229140:CDS
CCGACGTAGTAACAAGAAGC+CGG 0.616053 2_2:+757734 None:intergenic
TCTCCTATGCTTAACAGGAG+AGG 0.616681 2_2:+752468 None:intergenic
ATCGAAAATAAATAGGAAAG+CGG 0.617713 2_2:+746395 None:intergenic
TTGCGGATATCCGAATATCT+CGG 0.618444 2_2:-755147 Msa0229140:CDS
CGCGTCATACAGCAAAGCTG+CGG 0.620218 2_2:+756775 None:intergenic
ACCAACATCTGCTTGCATTG+CGG 0.622579 2_2:-755164 Msa0229140:CDS
TCCGCCAGACGGTGTCGGCG+AGG 0.628554 2_2:+759190 None:intergenic
GCGCCAACGAACTCTCCTAA+GGG 0.630802 2_2:-755595 Msa0229140:CDS
TTGATGAAGGCGACTGAATG+TGG 0.633961 2_2:-752432 Msa0229140:CDS
TGACTGGTGTTATCATCGAG+AGG 0.637654 2_2:-757708 Msa0229140:CDS
ACGTCTCAGTTGCAGCGGAG+TGG 0.638367 2_2:-759413 Msa0229140:CDS
CGGTGAAGTTGGCTGATCCG+GGG 0.639768 2_2:-757987 Msa0229140:CDS
TGGTATGGCCAAGGAAGCTG+CGG 0.640973 2_2:-746577 Msa0229140:CDS
AGGACTTCTTCTTATCAACA+GGG 0.646073 2_2:-750130 Msa0229140:CDS
TCTCAGTTAAAAGTGTGCAA+AGG 0.649118 2_2:-752779 Msa0229140:intron
ACAGGCCAGACAATTAGCAC+GGG 0.649292 2_2:-752228 Msa0229140:CDS
GATAAGATCGTCCCTTCCTG+AGG 0.650860 2_2:-755664 Msa0229140:CDS
GCAAGGCAGCTAACTTTCGG+CGG 0.651634 2_2:+752714 None:intergenic
GGGTTCGTGTTCAACAAGCA+AGG 0.653717 2_2:+752697 None:intergenic
TCTCTTTGATCATGTAAGAG+GGG 0.654355 2_2:+746285 None:intergenic
ATGGTTCCAAAGAACTCCAA+CGG 0.655891 2_2:+752251 None:intergenic
GGAGCCGCCACGGTGTATGG+CGG 0.656611 2_2:-757959 Msa0229140:CDS
GCTGCTGCACAGTCAAAAGA+CGG 0.657054 2_2:-746552 Msa0229140:CDS
TATCCCACTCTTCCAAACAA+TGG 0.657803 2_2:-759439 Msa0229140:exon
TATCATCGAGAGGGAGTGCG+AGG 0.667435 2_2:-757698 Msa0229140:intron
GTCGGCGAGGAGATGACCGG+AGG 0.669619 2_2:+759203 None:intergenic
AATTGTGAAGATTGAAACTG+TGG 0.675128 2_2:+756811 None:intergenic
AGGACCGTTGCAGAAGATGG+TGG 0.678490 2_2:-757800 Msa0229140:CDS
TTCCCAGACACCGTATACTG+CGG 0.689357 2_2:+757928 None:intergenic
ACCGTCTGGCGGAACCCCGG+CGG 0.690268 2_2:-759180 Msa0229140:CDS
AATAGGAAAGCGGTACGAGG+AGG 0.697951 2_2:+746405 None:intergenic
GGAGGTGGTGATAATGCACT+GGG 0.702431 2_2:-752945 Msa0229140:CDS
ATAAATAGGAAAGCGGTACG+AGG 0.702780 2_2:+746402 None:intergenic
GCAGACGAGAGTATGATCAT+CGG 0.705692 2_2:+759134 None:intergenic
TCCACCTGTTTAGATGAACG+GGG 0.712415 2_2:+752677 None:intergenic
TTCCGATTAACCTACCGCCG+GGG 0.712943 2_2:+759166 None:intergenic
TCAATAACCGCCATACACCG+TGG 0.722018 2_2:+757952 None:intergenic
ATAACCGCCATACACCGTGG+CGG 0.766199 2_2:+757955 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAAATTATTTTTAAAAAT+TGG + chr2_2:752014-752033 None:intergenic 0.0%
!!! TTTTTAAAAATAATTTATTT+TGG - chr2_2:752015-752034 Msa0229140:intron 0.0%
!! ATAAATAAAAAATTATATTA+TGG + chr2_2:759052-759071 None:intergenic 0.0%
!!! TATTTGTTTTTTGAAAATTT+AGG - chr2_2:746702-746721 Msa0229140:intron 10.0%
!!! TTTTTATAAAAATTATAAGC+TGG - chr2_2:746822-746841 Msa0229140:intron 10.0%
!! ATATTACTTAAAATACTAAA+AGG + chr2_2:747259-747278 None:intergenic 10.0%
!! TCATAATAATTAACAAAATT+GGG + chr2_2:748549-748568 None:intergenic 10.0%
!! ATCATAATAATTAACAAAAT+TGG + chr2_2:748550-748569 None:intergenic 10.0%
!! ACTTATATTCATTAAATATA+GGG + chr2_2:749502-749521 None:intergenic 10.0%
!!! AAACAATTTTTCAAATATTT+TGG + chr2_2:750225-750244 None:intergenic 10.0%
!!! TCTGATTTTATTAAAAAAAA+AGG + chr2_2:750768-750787 None:intergenic 10.0%
!! TATTATTAAAGATTATCATT+TGG + chr2_2:750966-750985 None:intergenic 10.0%
!! CCAAAAATAAAATAAAATAA+AGG + chr2_2:751462-751481 None:intergenic 10.0%
!!! CCTTTATTTTATTTTATTTT+TGG - chr2_2:751459-751478 Msa0229140:intron 10.0%
!!! TATTTTATTTTATTTTTGGA+TGG - chr2_2:751463-751482 Msa0229140:intron 10.0%
!! CTATAAAATTAAAATAATTC+AGG + chr2_2:755007-755026 None:intergenic 10.0%
!! TCTTAATCATAATTAAATAA+GGG + chr2_2:755303-755322 None:intergenic 10.0%
!! TTCTTAATCATAATTAAATA+AGG + chr2_2:755304-755323 None:intergenic 10.0%
!! TCTTTAAATATTAAAATTAG+AGG - chr2_2:755365-755384 Msa0229140:CDS 10.0%
!!! TAATTCAAAGATTTATTTTA+TGG + chr2_2:756264-756283 None:intergenic 10.0%
!! AAATTATTATTGTTTATTTG+AGG + chr2_2:757715-757734 None:intergenic 10.0%
!!! ACAATAATAATTTTATTATG+AGG - chr2_2:757722-757741 Msa0229140:CDS 10.0%
!!! TTTTGTTTTTTTTTTCTCAA+GGG + chr2_2:746215-746234 None:intergenic 15.0%
!!! TTTTTGTTTTTTTTTTCTCA+AGG + chr2_2:746216-746235 None:intergenic 15.0%
!!! CTAAAGATATTTTTTTATAC+TGG + chr2_2:747560-747579 None:intergenic 15.0%
!! AAATATTATCAATGCTAAAA+GGG + chr2_2:747595-747614 None:intergenic 15.0%
!! TAATATTTGATTATTGTAAC+AGG - chr2_2:747607-747626 Msa0229140:intron 15.0%
!!! TTTTAAGAAATTAGAATGAT+TGG - chr2_2:748317-748336 Msa0229140:intron 15.0%
!! TTTAAGAAATTAGAATGATT+GGG - chr2_2:748318-748337 Msa0229140:intron 15.0%
!! TCAAAAGAATTATATTAAGA+TGG + chr2_2:749326-749345 None:intergenic 15.0%
!! CACTTATATTCATTAAATAT+AGG + chr2_2:749503-749522 None:intergenic 15.0%
!! CTATATTTAATGAATATAAG+TGG - chr2_2:749501-749520 Msa0229140:intron 15.0%
!!! TTCTTTAAAAAGTCTAATAA+AGG + chr2_2:749735-749754 None:intergenic 15.0%
!! GTTTATACATTTAATGATAT+AGG - chr2_2:751112-751131 Msa0229140:intron 15.0%
!!! TTATTTTAACAAAGTTACAA+AGG - chr2_2:751251-751270 Msa0229140:intron 15.0%
!! ATTGAAAATCTAAAAATTGA+TGG - chr2_2:751332-751351 Msa0229140:intron 15.0%
!! GATGAAAATATTAGATATAA+TGG + chr2_2:751802-751821 None:intergenic 15.0%
!! ACAATCTAAATATAATAAGA+TGG + chr2_2:752237-752256 None:intergenic 15.0%
!! ATATTTAGATTGTTTATGTA+AGG - chr2_2:752244-752263 Msa0229140:CDS 15.0%
!!! TTACCATATTTTTTTTTCAA+AGG - chr2_2:752471-752490 Msa0229140:CDS 15.0%
!!! TAACCTTTGAAAAAAAAATA+TGG + chr2_2:752477-752496 None:intergenic 15.0%
!! GCATAAATAAATAAAAAATC+TGG - chr2_2:752555-752574 Msa0229140:intron 15.0%
!!! TATATATTTTAAATGTTGTC+AGG - chr2_2:753388-753407 Msa0229140:intron 15.0%
!!! ATTTGATAACATGTTTTTAA+CGG - chr2_2:754612-754631 Msa0229140:intron 15.0%
!!! ACTCTATTGATTATTAAAAA+GGG + chr2_2:755480-755499 None:intergenic 15.0%
!! AAAATGAGATTATTTATCAA+AGG + chr2_2:755554-755573 None:intergenic 15.0%
!!! CTGATTTTGAATATTATATA+CGG - chr2_2:755673-755692 Msa0229140:CDS 15.0%
!!! TAACTTTTTTTTTTTTTGCA+CGG - chr2_2:755777-755796 Msa0229140:intron 15.0%
!! ATCACTTAATGATAAATATA+TGG + chr2_2:756321-756340 None:intergenic 15.0%
!! AATAATTGTGAAATTTCAAT+TGG + chr2_2:756514-756533 None:intergenic 15.0%
!!! ACAAGGATTAATAATTTTAT+GGG + chr2_2:756586-756605 None:intergenic 15.0%
!!! AACAAGGATTAATAATTTTA+TGG + chr2_2:756587-756606 None:intergenic 15.0%
!! AGTTTGGATTAATTAATTAA+TGG - chr2_2:757338-757357 Msa0229140:intron 15.0%
!! ATATATGTAAAATGTTTACA+CGG - chr2_2:757455-757474 Msa0229140:intron 15.0%
!! AAAATTACACTACTAATTAA+TGG + chr2_2:757678-757697 None:intergenic 15.0%
!!! TTTTTTTCTTTTACTATGTT+TGG - chr2_2:758214-758233 Msa0229140:intron 15.0%
!!! GAAAATTTAGGTAATGTTTT+TGG - chr2_2:746714-746733 Msa0229140:intron 20.0%
!!! CAAAGAAATTATTTTCATTC+TGG + chr2_2:746865-746884 None:intergenic 20.0%
!!! ATCCTTATTTTGTTGAAAAT+TGG - chr2_2:747169-747188 Msa0229140:intron 20.0%
!!! ATCCAATTTTCAACAAAATA+AGG + chr2_2:747174-747193 None:intergenic 20.0%
!! CAAATATTATCAATGCTAAA+AGG + chr2_2:747596-747615 None:intergenic 20.0%
!!! TTTTGTGAATAAAATAAGCT+AGG - chr2_2:748229-748248 Msa0229140:intron 20.0%
!! TAATAATTAACAAAATTGGG+TGG + chr2_2:748546-748565 None:intergenic 20.0%
!! TCATAGATCATAAACAATTA+TGG + chr2_2:748640-748659 None:intergenic 20.0%
!!! ACCTTAAAATTCATTTTTCT+TGG - chr2_2:749229-749248 Msa0229140:intron 20.0%
!!! TTAAAATTCATTTTTCTTGG+CGG - chr2_2:749232-749251 Msa0229140:intron 20.0%
!! AATAATTAACATACATTCCT+TGG + chr2_2:749470-749489 None:intergenic 20.0%
!! GGAATGTATGTTAATTATTT+AGG - chr2_2:749471-749490 Msa0229140:intron 20.0%
!!! CTTTTTAAAGAAACAAACAA+TGG - chr2_2:749743-749762 Msa0229140:intron 20.0%
!!! TACTTTTATCATCCATTATT+GGG + chr2_2:749777-749796 None:intergenic 20.0%
!! TAATTTCGTATTTATGAACT+CGG + chr2_2:751148-751167 None:intergenic 20.0%
!! AGTTCATAAATACGAAATTA+GGG - chr2_2:751148-751167 Msa0229140:intron 20.0%
!! ATATTTCCATAAACAGAATT+AGG + chr2_2:751306-751325 None:intergenic 20.0%
!! AAAATATCAAGAGGAAAAAA+AGG + chr2_2:751682-751701 None:intergenic 20.0%
!! AACACAAGAAAAATCTAAAA+GGG + chr2_2:752517-752536 None:intergenic 20.0%
!! TAACACAAGAAAAATCTAAA+AGG + chr2_2:752518-752537 None:intergenic 20.0%
!! ATAAATAAAAAATCTGGATG+TGG - chr2_2:752561-752580 Msa0229140:intron 20.0%
!! TTGATGAGAACAATAATAAA+AGG + chr2_2:753187-753206 None:intergenic 20.0%
!! ACTTATTTATAACTTATGCA+CGG - chr2_2:753525-753544 Msa0229140:intron 20.0%
!!! TTCCTTGTTATGTAATATTA+AGG - chr2_2:753592-753611 Msa0229140:intron 20.0%
!! AACCTTAATATTACATAACA+AGG + chr2_2:753597-753616 None:intergenic 20.0%
!! ATAATGAGTTTGATATTCTT+TGG - chr2_2:754261-754280 Msa0229140:intron 20.0%
!! ACATGTTATCAAATCAAAAA+AGG + chr2_2:754606-754625 None:intergenic 20.0%
!! AAGAAATACTAGTAGTTTAT+AGG + chr2_2:754665-754684 None:intergenic 20.0%
!!! TGAAAGAGTTTTAAATATGT+TGG - chr2_2:754755-754774 Msa0229140:intron 20.0%
!!! TTTTAAATATGTTGGAATCA+TGG - chr2_2:754763-754782 Msa0229140:intron 20.0%
!! TTTAAATATGTTGGAATCAT+GGG - chr2_2:754764-754783 Msa0229140:intron 20.0%
!!! AAAAGGGTTAATTATGTTTT+TGG + chr2_2:755250-755269 None:intergenic 20.0%
!!! GACTCTATTGATTATTAAAA+AGG + chr2_2:755481-755500 None:intergenic 20.0%
!!! TGATAAATAATCTCATTTTC+AGG - chr2_2:755555-755574 Msa0229140:intron 20.0%
!!! CTATAAACATGAATTTTTGA+AGG - chr2_2:755580-755599 Msa0229140:CDS 20.0%
!!! TATTTAATTCGTTAAGCTTT+TGG - chr2_2:756282-756301 Msa0229140:intron 20.0%
!!! ATTTAATTCGTTAAGCTTTT+GGG - chr2_2:756283-756302 Msa0229140:intron 20.0%
!! TTAAAGTAGTAACTTTATCT+TGG - chr2_2:756444-756463 Msa0229140:intron 20.0%
!! AAAAGTGAAAACAGAATTTA+AGG - chr2_2:756771-756790 Msa0229140:CDS 20.0%
!! TAATACTCTCTTAAATATGA+GGG + chr2_2:757552-757571 None:intergenic 20.0%
!! ATAATACTCTCTTAAATATG+AGG + chr2_2:757553-757572 None:intergenic 20.0%
!! GTTATTATAAGATGTTACTA+GGG + chr2_2:757626-757645 None:intergenic 20.0%
!! TGTTATTATAAGATGTTACT+AGG + chr2_2:757627-757646 None:intergenic 20.0%
!! TATTGTTCGTCAAAATAATA+AGG + chr2_2:758242-758261 None:intergenic 20.0%
!!! CTTTTTTTTAACAGTTTTTG+AGG - chr2_2:758430-758449 Msa0229140:intron 20.0%
!!! TTGTATATCTTTTCTTATTC+TGG - chr2_2:759112-759131 Msa0229140:CDS 20.0%
! TTATTACCTAACGATAGATT+CGG + chr2_2:746676-746695 None:intergenic 25.0%
!! AGCTTATGAAGATACAATTT+TGG + chr2_2:747001-747020 None:intergenic 25.0%
!!! TACTATTCATAAGCTTGTTA+AGG + chr2_2:747040-747059 None:intergenic 25.0%
! AACACCTTATGGAAATAAAT+AGG + chr2_2:747071-747090 None:intergenic 25.0%
!! TTCAATGAGAAGTTGATTTA+GGG + chr2_2:747129-747148 None:intergenic 25.0%
! GCATAGAAATTAAACTCTAA+GGG + chr2_2:747286-747305 None:intergenic 25.0%
! TGCATAGAAATTAAACTCTA+AGG + chr2_2:747287-747306 None:intergenic 25.0%
!! TAGAGTTTAATTTCTATGCA+AGG - chr2_2:747287-747306 Msa0229140:intron 25.0%
! AAAAGTTTCTATTGATCTGA+CGG - chr2_2:747382-747401 Msa0229140:CDS 25.0%
!!! TTGTTATTGTGAATTTTGTG+TGG - chr2_2:748098-748117 Msa0229140:intron 25.0%
!! ATACTGTCTTGATAGTTATT+TGG - chr2_2:748203-748222 Msa0229140:intron 25.0%
!! ATGAGATTTTGTAGAATTTG+AGG - chr2_2:748406-748425 Msa0229140:intron 25.0%
!! TGAGATTTTGTAGAATTTGA+GGG - chr2_2:748407-748426 Msa0229140:intron 25.0%
!! GATGATATGCTTTTAATGAT+GGG - chr2_2:748777-748796 Msa0229140:intron 25.0%
! ACTTACTTCATAAATATCTG+AGG - chr2_2:749044-749063 Msa0229140:CDS 25.0%
! GAATTCAGTAATTCATTTGT+TGG + chr2_2:749121-749140 None:intergenic 25.0%
!! GCCAAGAAAAATGAATTTTA+AGG + chr2_2:749233-749252 None:intergenic 25.0%
! AAAATTGATGCTCAATATAG+TGG + chr2_2:749291-749310 None:intergenic 25.0%
!!! CTACTTTTATCATCCATTAT+TGG + chr2_2:749778-749797 None:intergenic 25.0%
! ATGGATGATAAAAGTAGATT+TGG - chr2_2:749781-749800 Msa0229140:intron 25.0%
! GGGAATGATGATAAAAAAAT+CGG + chr2_2:750023-750042 None:intergenic 25.0%
! CTGCTAAAAGAATGTAATTA+AGG + chr2_2:750253-750272 None:intergenic 25.0%
! AAGAAATGTGTAAAATTCTG+CGG - chr2_2:750362-750381 Msa0229140:intron 25.0%
! TTATATTGCTGAATACTAAG+AGG + chr2_2:750424-750443 None:intergenic 25.0%
! TCTTAGTATTCAGCAATATA+AGG - chr2_2:750423-750442 Msa0229140:intron 25.0%
!! TCAGCAATATAAGGTTTTTA+AGG - chr2_2:750432-750451 Msa0229140:intron 25.0%
!!! TATCCTTTTTCATTTTATGC+AGG + chr2_2:750839-750858 None:intergenic 25.0%
!! ATTTTCCTTACATATGTCAA+AGG + chr2_2:750918-750937 None:intergenic 25.0%
! AAAGATTATCATTTGGATGA+GGG + chr2_2:750959-750978 None:intergenic 25.0%
! TAAAGATTATCATTTGGATG+AGG + chr2_2:750960-750979 None:intergenic 25.0%
!! GTCAAATACATGTTTTACTT+TGG + chr2_2:751017-751036 None:intergenic 25.0%
!!! AAAACATGTATTTGACTTGA+TGG - chr2_2:751021-751040 Msa0229140:intron 25.0%
! GAGTTCATAAATACGAAATT+AGG - chr2_2:751147-751166 Msa0229140:intron 25.0%
!! AAATACGAAATTAGGGTTTT+AGG - chr2_2:751155-751174 Msa0229140:intron 25.0%
!!! ATTTTATTTTTGGATGGAAG+AGG - chr2_2:751469-751488 Msa0229140:intron 25.0%
!!! ATTTTCATCCCATTTTAAGT+TGG - chr2_2:751813-751832 Msa0229140:intron 25.0%
!!! CTTTTGAGTATATGAATGTT+TGG - chr2_2:751887-751906 Msa0229140:intron 25.0%
! AAAAATTGGACACCTTTAAA+AGG + chr2_2:752000-752019 None:intergenic 25.0%
! AATGTCAAAGATCTAATCTA+AGG + chr2_2:752130-752149 None:intergenic 25.0%
!!! TTTTTTAGGCTCATTATCAT+AGG - chr2_2:752183-752202 Msa0229140:intron 25.0%
!! TTTTTGAACAACCAACAAAA+TGG + chr2_2:752598-752617 None:intergenic 25.0%
! TAACATGCTATATGAAAACA+AGG - chr2_2:752620-752639 Msa0229140:intron 25.0%
!!! TTCTTGTTTTCTAGTTATTC+TGG - chr2_2:753077-753096 Msa0229140:intron 25.0%
!!! TCTTGTTTTCTAGTTATTCT+GGG - chr2_2:753078-753097 Msa0229140:intron 25.0%
!!! ACCTTGTACTTTTTCATATT+TGG - chr2_2:753338-753357 Msa0229140:intron 25.0%
!!! ACTTTTTCATATTTGGCAAA+AGG - chr2_2:753345-753364 Msa0229140:intron 25.0%
! ATCTTTGGATTGTTTATGTA+AGG + chr2_2:754093-754112 None:intergenic 25.0%
! TAAACAATCCAAAGATAAGA+AGG - chr2_2:754097-754116 Msa0229140:intron 25.0%
!!! TGATGAGTAATCTATTTCTA+TGG + chr2_2:754422-754441 None:intergenic 25.0%
! AATGCCACATTATTAAGTAA+AGG - chr2_2:755073-755092 Msa0229140:intron 25.0%
!!! GTTGACATTTTTAAGTTATG+TGG + chr2_2:755099-755118 None:intergenic 25.0%
! ATATACAGAGATATCGAAAA+GGG + chr2_2:755266-755285 None:intergenic 25.0%
! AATATACAGAGATATCGAAA+AGG + chr2_2:755267-755286 None:intergenic 25.0%
! GAATTTAATACAGCAAAAAG+TGG - chr2_2:755321-755340 Msa0229140:CDS 25.0%
! AAAGTTATTGATATCAAACG+AGG + chr2_2:755764-755783 None:intergenic 25.0%
!!! TTATAAACTTTTTGAGAGTG+TGG + chr2_2:755892-755911 None:intergenic 25.0%
! ACTAGCAATACTTAACATAT+TGG + chr2_2:755935-755954 None:intergenic 25.0%
!!! TTCTCAATAAGTTTTATTCG+AGG + chr2_2:756130-756149 None:intergenic 25.0%
! TCGAATAAAACTTATTGAGA+AGG - chr2_2:756129-756148 Msa0229140:intron 25.0%
!! TTTAATTCGTTAAGCTTTTG+GGG - chr2_2:756284-756303 Msa0229140:intron 25.0%
! ACTAGCTGTTGAATAAAATT+AGG - chr2_2:756381-756400 Msa0229140:intron 25.0%
! CTAGCTGTTGAATAAAATTA+GGG - chr2_2:756382-756401 Msa0229140:intron 25.0%
! TGTGAAATTTCAATTGGAAA+GGG + chr2_2:756508-756527 None:intergenic 25.0%
! TTGTGAAATTTCAATTGGAA+AGG + chr2_2:756509-756528 None:intergenic 25.0%
! AATGGTTAAGGAATCAAAAA+AGG + chr2_2:756538-756557 None:intergenic 25.0%
! AATATTCATGCATTCAATCA+AGG - chr2_2:756612-756631 Msa0229140:intron 25.0%
! ATATTCATGCATTCAATCAA+GGG - chr2_2:756613-756632 Msa0229140:intron 25.0%
! TATACTTGAATCCACAAAAA+TGG + chr2_2:756701-756720 None:intergenic 25.0%
! TACACAAATCATTCATTCAA+AGG + chr2_2:756853-756872 None:intergenic 25.0%
! ACAATGTGAAACAAACAAAT+AGG - chr2_2:756885-756904 Msa0229140:CDS 25.0%
!!! ACATTCTAAAACTTACCTAT+TGG + chr2_2:757083-757102 None:intergenic 25.0%
!! CGTATCTTTTTCTTTAATAG+TGG - chr2_2:757130-757149 Msa0229140:intron 25.0%
!!! TGAATCTATGGAGTTTTAAA+AGG - chr2_2:757230-757249 Msa0229140:intron 25.0%
!! GATCCTCTCAATTTTATATT+CGG - chr2_2:757266-757285 Msa0229140:intron 25.0%
! TAACCGAATATAAAATTGAG+AGG + chr2_2:757272-757291 None:intergenic 25.0%
!!! CTTATTTTAGAATCTCTCAA+TGG - chr2_2:757750-757769 Msa0229140:CDS 25.0%
! TTTGATATAACATAAACAGC+TGG + chr2_2:757815-757834 None:intergenic 25.0%
! CAAAATTGCAAAGTATAAAC+TGG + chr2_2:757911-757930 None:intergenic 25.0%
!! CAGTTTATACTTTGCAATTT+TGG - chr2_2:757909-757928 Msa0229140:CDS 25.0%
! TTCAATAACTAATGCTCTAA+AGG + chr2_2:757967-757986 None:intergenic 25.0%
!! CTCCTTAACCAATATATTTT+GGG - chr2_2:758100-758119 Msa0229140:CDS 25.0%
!! ATAAAGTGCCCAAAATATAT+TGG + chr2_2:758111-758130 None:intergenic 25.0%
!!! AATATATTTTGGGCACTTTA+TGG - chr2_2:758110-758129 Msa0229140:intron 25.0%
! ATGAAGAACAAAAATTGAAC+TGG + chr2_2:758511-758530 None:intergenic 25.0%
!! GATACATTATTGATTGTTTG+AGG - chr2_2:758575-758594 Msa0229140:intron 25.0%
!!! TAATTGTTTTCAAAAAGCAC+CGG + chr2_2:758771-758790 None:intergenic 25.0%
! TTAGAGAAAATAGAAAGACA+TGG - chr2_2:758921-758940 Msa0229140:intron 25.0%
! TTGAATTACAAACTACACAA+CGG - chr2_2:758955-758974 Msa0229140:intron 25.0%
! ATCGAAAATAAATAGGAAAG+CGG + chr2_2:759338-759357 None:intergenic 25.0%
! CGAATTGATCGAAAATAAAT+AGG + chr2_2:759345-759364 None:intergenic 25.0%
! TTAAAAATGTACCTTATCTG+AGG - chr2_2:759387-759406 Msa0229140:CDS 25.0%
!! TTTTTCGTGTTTATATTGCT+TGG - chr2_2:759475-759494 Msa0229140:five_prime_UTR 25.0%
!!! TTTTTTTTTCTCAAGGGTCT+TGG + chr2_2:746209-746228 None:intergenic 30.0%
!! GTTATTGTGAGTTTTGATCA+AGG + chr2_2:746262-746281 None:intergenic 30.0%
!!! AGGTAATGTTTTTGGAATTG+AGG - chr2_2:746722-746741 Msa0229140:intron 30.0%
!!! GGTAATGTTTTTGGAATTGA+GGG - chr2_2:746723-746742 Msa0229140:intron 30.0%
!!! GGGATTGTTTTTGTTTGTTA+TGG - chr2_2:746743-746762 Msa0229140:intron 30.0%
CAAGCCTATTTATTTCCATA+AGG - chr2_2:747064-747083 Msa0229140:intron 30.0%
AAAAGTAAGCCAATCCAAAT+GGG - chr2_2:747103-747122 Msa0229140:intron 30.0%
! CTTCAATGAGAAGTTGATTT+AGG + chr2_2:747130-747149 None:intergenic 30.0%
TTACAGCTTCTTTCATGAAA+AGG + chr2_2:747215-747234 None:intergenic 30.0%
ACGGTTGTGATTAACTAAAA+GGG - chr2_2:747408-747427 Msa0229140:CDS 30.0%
!! GAATCAGTTGTTTTGTATTG+CGG - chr2_2:747702-747721 Msa0229140:intron 30.0%
! ATTGTGAATTTTGTGTGGTT+TGG - chr2_2:748103-748122 Msa0229140:intron 30.0%
TTGTAGACTTACATGTTTCT+AGG - chr2_2:748147-748166 Msa0229140:intron 30.0%
ATGCTTAAGATTTGTGTTTG+TGG - chr2_2:748454-748473 Msa0229140:intron 30.0%
TGCTTAAGATTTGTGTTTGT+GGG - chr2_2:748455-748474 Msa0229140:intron 30.0%
ATAAATTATAGACCTGACAG+CGG + chr2_2:748683-748702 None:intergenic 30.0%
! GGATGATATGCTTTTAATGA+TGG - chr2_2:748776-748795 Msa0229140:intron 30.0%
!! GAATTATTGGTTCGTCATAA+AGG + chr2_2:748827-748846 None:intergenic 30.0%
CACTCAGGAATAAGAATTAT+TGG + chr2_2:748840-748859 None:intergenic 30.0%
AATTGTGAAGATTGAAACTG+TGG + chr2_2:748922-748941 None:intergenic 30.0%
ACAGTTTCAATCTTCACAAT+TGG - chr2_2:748921-748940 Msa0229140:intron 30.0%
TAGTCTACAAACTTAAGATG+TGG - chr2_2:749160-749179 Msa0229140:intron 30.0%
GTTTGATCATTATTCTCCAT+TGG - chr2_2:749259-749278 Msa0229140:intron 30.0%
!!! AATATAGTGGTTTTAGCCAA+TGG + chr2_2:749278-749297 None:intergenic 30.0%
TAGATTCTGTTGTGTAAATC+GGG + chr2_2:749542-749561 None:intergenic 30.0%
CTAGATTCTGTTGTGTAAAT+CGG + chr2_2:749543-749562 None:intergenic 30.0%
TTTACACAACAGAATCTAGT+TGG - chr2_2:749544-749563 Msa0229140:CDS 30.0%
AACAGAATCTAGTTGGATAT+TGG - chr2_2:749551-749570 Msa0229140:CDS 30.0%
! TAGATTTGGTTGATTGAGTA+TGG - chr2_2:749795-749814 Msa0229140:intron 30.0%
!! CTCTATTTAGTTCTACATAG+AGG - chr2_2:749830-749849 Msa0229140:intron 30.0%
!!! TTTTTTTATCATCATTCCCC+AGG - chr2_2:750024-750043 Msa0229140:intron 30.0%
AAATCAAGCTTACCTACAAA+AGG + chr2_2:750179-750198 None:intergenic 30.0%
! GCTTGATTTGAATTATCTGT+TGG - chr2_2:750190-750209 Msa0229140:intron 30.0%
! TTCTTTTAGCAGTGAAAGTT+TGG - chr2_2:750261-750280 Msa0229140:intron 30.0%
! TAATGATATCCAGTTGACTT+TGG - chr2_2:750313-750332 Msa0229140:intron 30.0%
! GCAGAATTTTACACATTTCT+TGG + chr2_2:750363-750382 None:intergenic 30.0%
AGAAATGTGTAAAATTCTGC+GGG - chr2_2:750363-750382 Msa0229140:intron 30.0%
TTGATTCATTCCGAGATATT+CGG + chr2_2:750596-750615 None:intergenic 30.0%
CAATCTTGTATTTGATCAGT+TGG + chr2_2:750671-750690 None:intergenic 30.0%
GATCCTGCATAAAATGAAAA+AGG - chr2_2:750833-750852 Msa0229140:intron 30.0%
CAAACAACAAAGCATGAATA+AGG - chr2_2:750861-750880 Msa0229140:intron 30.0%
CTTACATATGTCAAAGGATT+GGG + chr2_2:750912-750931 None:intergenic 30.0%
! TTTACTTTGGTGCATTTGAT+TGG + chr2_2:751004-751023 None:intergenic 30.0%
!! TGTATTTGACTTGATGGTTA+CGG - chr2_2:751027-751046 Msa0229140:intron 30.0%
CTTCTCATCTACTTAATACA+CGG - chr2_2:751067-751086 Msa0229140:intron 30.0%
TATACACTACAGTACAGATA+CGG - chr2_2:751206-751225 Msa0229140:intron 30.0%
GTTTGTCCTAATTCTGTTTA+TGG - chr2_2:751297-751316 Msa0229140:intron 30.0%
CAACAAATAACAATGTTGCA+AGG - chr2_2:751358-751377 Msa0229140:intron 30.0%
GAAGAGGAAAAAACAATTGT+TGG - chr2_2:751485-751504 Msa0229140:intron 30.0%
AGGAAAAAACAATTGTTGGT+TGG - chr2_2:751489-751508 Msa0229140:intron 30.0%
! GGAAAAAACAATTGTTGGTT+GGG - chr2_2:751490-751509 Msa0229140:intron 30.0%
ATATCAAGAGGAAAAAAAGG+CGG + chr2_2:751679-751698 None:intergenic 30.0%
CTTGAGTAGAAAATATCAAG+AGG + chr2_2:751691-751710 None:intergenic 30.0%
!!! GCATAGAGTTTTGAGAAAAA+TGG + chr2_2:751754-751773 None:intergenic 30.0%
GAACTCTTCCAACTTAAAAT+GGG + chr2_2:751824-751843 None:intergenic 30.0%
AGAACTCTTCCAACTTAAAA+TGG + chr2_2:751825-751844 None:intergenic 30.0%
TACTCAAAAGAACAGTTCAA+AGG + chr2_2:751877-751896 None:intergenic 30.0%
ATATGAATGTTTGGTCTATC+AGG - chr2_2:751896-751915 Msa0229140:intron 30.0%
! CAAAGATCTAATCTAAGGTT+AGG + chr2_2:752125-752144 None:intergenic 30.0%
!!! TGCCTCTTATCATGTTTTTT+AGG - chr2_2:752169-752188 Msa0229140:intron 30.0%
AGCCTAAAAAACATGATAAG+AGG + chr2_2:752174-752193 None:intergenic 30.0%
AGTCTAACTACTTCTCTTAT+AGG - chr2_2:752388-752407 Msa0229140:CDS 30.0%
!! TTTGTTGACTACTTTTGTGT+AGG - chr2_2:752764-752783 Msa0229140:CDS 30.0%
CTGGGTACATGTTAAATTAA+TGG - chr2_2:753096-753115 Msa0229140:intron 30.0%
TCTCATCAATTCTCATGTTT+AGG - chr2_2:753198-753217 Msa0229140:intron 30.0%
TCTCATCAATTCTCATGTTT+AGG - chr2_2:753198-753217 Msa0229140:intron 30.0%
! GAAAAAGTACAAGGTAAACA+AGG + chr2_2:753333-753352 None:intergenic 30.0%
! GCCAAATATGAAAAAGTACA+AGG + chr2_2:753342-753361 None:intergenic 30.0%
! TCATATTTGGCAAAAGGTAT+TGG - chr2_2:753351-753370 Msa0229140:intron 30.0%
!! CCTTTTGAAAAATGGTTCAA+TGG + chr2_2:753557-753576 None:intergenic 30.0%
!! CCATTGAACCATTTTTCAAA+AGG - chr2_2:753554-753573 Msa0229140:intron 30.0%
TATGATAGAAGTAGAAGTTC+AGG - chr2_2:753719-753738 Msa0229140:intron 30.0%
CATTGAACAAGTGTTAGAAA+GGG + chr2_2:753784-753803 None:intergenic 30.0%
TCATTGAACAAGTGTTAGAA+AGG + chr2_2:753785-753804 None:intergenic 30.0%
AAAGTTTATTTGCTCATACC+CGG - chr2_2:753809-753828 Msa0229140:intron 30.0%
TAGCTTCATATTTCAGAGAA+TGG + chr2_2:753873-753892 None:intergenic 30.0%
! GAATGTCTAAATCTGTTTCT+TGG - chr2_2:753893-753912 Msa0229140:intron 30.0%
ACATACATCATATTCTACAG+CGG + chr2_2:753978-753997 None:intergenic 30.0%
ACACTTCTATATTGCTATGA+GGG + chr2_2:754003-754022 None:intergenic 30.0%
! CTAAGTACTCTATTTTGTCA+AGG + chr2_2:754043-754062 None:intergenic 30.0%
TTTAGTCATGGTGAAATTGT+CGG - chr2_2:754338-754357 Msa0229140:intron 30.0%
AATCAATGCAATTTAGAAGC+AGG - chr2_2:754484-754503 Msa0229140:intron 30.0%
!! CTAGTAGTTTATAGGTTGAT+GGG + chr2_2:754657-754676 None:intergenic 30.0%
! ACTAGTAGTTTATAGGTTGA+TGG + chr2_2:754658-754677 None:intergenic 30.0%
GTTTCAATTTCTGTCATTCT+AGG - chr2_2:754959-754978 Msa0229140:intron 30.0%
ATTCTATGAAGGACTAAAAG+TGG - chr2_2:755165-755184 Msa0229140:CDS 30.0%
TTCTATGAAGGACTAAAAGT+GGG - chr2_2:755166-755185 Msa0229140:CDS 30.0%
!!! AAAAAGTGGACTAGTGTTTT+GGG - chr2_2:755335-755354 Msa0229140:CDS 30.0%
GTTAAGATTTAATATCGCTC+CGG - chr2_2:755410-755429 Msa0229140:intron 30.0%
AGTTGCATTTCCTTGTAATA+GGG - chr2_2:755713-755732 Msa0229140:intron 30.0%
AATACTTAACATATTGGCAC+TGG + chr2_2:755929-755948 None:intergenic 30.0%
!! ATTCTGAAATTAATCCATGC+AGG - chr2_2:756024-756043 Msa0229140:intron 30.0%
! TTCTTCTTTGGAAAGAATCA+TGG - chr2_2:756056-756075 Msa0229140:intron 30.0%
! TCTTCTTTGGAAAGAATCAT+GGG - chr2_2:756057-756076 Msa0229140:intron 30.0%
! GGTTTCTGCAAAAAGATTTT+GGG + chr2_2:756155-756174 None:intergenic 30.0%
! TGGTTTCTGCAAAAAGATTT+TGG + chr2_2:756156-756175 None:intergenic 30.0%
! AAATCTTTTTGCAGAAACCA+AGG - chr2_2:756156-756175 Msa0229140:intron 30.0%
GCATGAATATTTAGTCAACA+AGG + chr2_2:756603-756622 None:intergenic 30.0%
! GTGAAAACAGAATTTAAGGT+TGG - chr2_2:756775-756794 Msa0229140:CDS 30.0%
! TGAACTGATTTATACAGAAG+CGG + chr2_2:756931-756950 None:intergenic 30.0%
! CTCCTTCGAAAATTTTTCTA+GGG + chr2_2:757051-757070 None:intergenic 30.0%
! TCTCCTTCGAAAATTTTTCT+AGG + chr2_2:757052-757071 None:intergenic 30.0%
!! TTCTAAAACTTACCTATTGG+AGG + chr2_2:757080-757099 None:intergenic 30.0%
! ACTAGACTAACCATCTTTTT+AGG - chr2_2:757300-757319 Msa0229140:intron 30.0%
AAAGCTCATAAACTCAAGAA+AGG - chr2_2:757592-757611 Msa0229140:intron 30.0%
! TTTGCAATTTTGGATACCTA+TGG - chr2_2:757919-757938 Msa0229140:CDS 30.0%
! GCTCCTTAACCAATATATTT+TGG - chr2_2:758099-758118 Msa0229140:CDS 30.0%
! TGCCCAAAATATATTGGTTA+AGG + chr2_2:758105-758124 None:intergenic 30.0%
CGTCTCTTTCATAATTCATA+GGG + chr2_2:758141-758160 None:intergenic 30.0%
TCATGATGAACATTACAAGA+GGG + chr2_2:758183-758202 None:intergenic 30.0%
TTCATGATGAACATTACAAG+AGG + chr2_2:758184-758203 None:intergenic 30.0%
TAATGTTCATCATGAAGTAG+TGG - chr2_2:758188-758207 Msa0229140:intron 30.0%
TTCATGTTATTAGTTGAACC+AGG - chr2_2:758546-758565 Msa0229140:intron 30.0%
TCATGTTATTAGTTGAACCA+GGG - chr2_2:758547-758566 Msa0229140:intron 30.0%
! TCATTTTAGACGAAAAAGTG+AGG + chr2_2:758656-758675 None:intergenic 30.0%
!! CATATTGTAGGCTTTATTTC+TGG + chr2_2:758713-758732 None:intergenic 30.0%
!!! AATTGTTTTCAAAAAGCACC+GGG + chr2_2:758770-758789 None:intergenic 30.0%
! CTCTAATTTGTGCTACAAAT+TGG + chr2_2:758866-758885 None:intergenic 30.0%
AAGAGGGGGATAAAAAAAAA+GGG + chr2_2:759433-759452 None:intergenic 30.0%
TAAGAGGGGGATAAAAAAAA+AGG + chr2_2:759434-759453 None:intergenic 30.0%
!! ATTGTGAGTTTTGATCAAGG+TGG + chr2_2:746259-746278 None:intergenic 35.0%
ATTGAACCGAATCTATCGTT+AGG - chr2_2:746667-746686 Msa0229140:intron 35.0%
TGACTTTATGCGAAGCTAAT+TGG - chr2_2:746910-746929 Msa0229140:intron 35.0%
TTATGCGAAGCTAATTGGAT+TGG - chr2_2:746915-746934 Msa0229140:intron 35.0%
AGCTTATGCAAAACACCTTA+TGG + chr2_2:747082-747101 None:intergenic 35.0%
CAAAAGTAAGCCAATCCAAA+TGG - chr2_2:747102-747121 Msa0229140:intron 35.0%
! TCTAAAGTCGCATACATGAT+TGG + chr2_2:747350-747369 None:intergenic 35.0%
AATCATGTATGCGACTTTAG+AGG - chr2_2:747349-747368 Msa0229140:intron 35.0%
GACGGTTGTGATTAACTAAA+AGG - chr2_2:747407-747426 Msa0229140:CDS 35.0%
AAATGGCGTCGTTTGTATAA+CGG - chr2_2:747675-747694 Msa0229140:intron 35.0%
!! GGATTTTAAAAACCCTAACG+CGG - chr2_2:747723-747742 Msa0229140:intron 35.0%
!! ACATGTTTCTAGGATCTTGT+AGG - chr2_2:748157-748176 Msa0229140:intron 35.0%
TAAAACACCAACACAACATG+TGG + chr2_2:748349-748368 None:intergenic 35.0%
!! CTTATGTAGCATTGACACTT+AGG + chr2_2:748374-748393 None:intergenic 35.0%
GCTTAAGATTTGTGTTTGTG+GGG - chr2_2:748456-748475 Msa0229140:intron 35.0%
CATGTGTAAGTGGCAAAAAA+GGG - chr2_2:748590-748609 Msa0229140:intron 35.0%
!! TATTGGTTCGTCATAAAGGT+AGG + chr2_2:748823-748842 None:intergenic 35.0%
GATATTGTCCAATGCTAGTA+TGG - chr2_2:748872-748891 Msa0229140:intron 35.0%
CAGAAATTCCATACTAGCAT+TGG + chr2_2:748883-748902 None:intergenic 35.0%
CTAGTATGGAATTTCTGCAA+CGG - chr2_2:748886-748905 Msa0229140:intron 35.0%
TAGTATGGAATTTCTGCAAC+GGG - chr2_2:748887-748906 Msa0229140:intron 35.0%
!! ACGCGTTAGATCATTTTGAT+AGG - chr2_2:748973-748992 Msa0229140:CDS 35.0%
TCATGCATTAGTAAGAGAAC+AGG + chr2_2:749025-749044 None:intergenic 35.0%
! CAGTAATTCATTTGTTGGCA+AGG + chr2_2:749116-749135 None:intergenic 35.0%
ACAAACTTAAGATGTGGAGT+AGG - chr2_2:749166-749185 Msa0229140:intron 35.0%
CAAACTTAAGATGTGGAGTA+GGG - chr2_2:749167-749186 Msa0229140:intron 35.0%
! GGAAATACTGCATAGTTTGT+GGG - chr2_2:749188-749207 Msa0229140:intron 35.0%
TACATAGAGGAAAACGATGA+AGG - chr2_2:749843-749862 Msa0229140:intron 35.0%
! TCTCAAATTTTCATCTGCCT+GGG + chr2_2:750044-750063 None:intergenic 35.0%
! ATCTCAAATTTTCATCTGCC+TGG + chr2_2:750045-750064 None:intergenic 35.0%
! TGTTTTCTGATATTCGCTCT+CGG - chr2_2:750290-750309 Msa0229140:intron 35.0%
AAAAAAAGGCAGAAAAGTCC+AGG + chr2_2:750754-750773 None:intergenic 35.0%
CCTTACATATGTCAAAGGAT+TGG + chr2_2:750913-750932 None:intergenic 35.0%
CCAATCCTTTGACATATGTA+AGG - chr2_2:750910-750929 Msa0229140:intron 35.0%
ACAATGTTGCAAGGTTGTAA+TGG - chr2_2:751367-751386 Msa0229140:intron 35.0%
CAATGTTGCAAGGTTGTAAT+GGG - chr2_2:751368-751387 Msa0229140:intron 35.0%
! GGTTGTAATGGGAAAATATG+AGG - chr2_2:751379-751398 Msa0229140:intron 35.0%
GGGAAAATATGAGGTGAATT+AGG - chr2_2:751388-751407 Msa0229140:intron 35.0%
ACAAAGGTAACAGCAGTTAA+AGG - chr2_2:751521-751540 Msa0229140:intron 35.0%
TAACAGCAGTTAAAGGATCA+AGG - chr2_2:751528-751547 Msa0229140:intron 35.0%
AATGGAAGAAGCAATGAATG+AGG + chr2_2:751736-751755 None:intergenic 35.0%
TCAAAAGAACAGTTCAAAGG+TGG + chr2_2:751874-751893 None:intergenic 35.0%
GTTTCATATGCCAATACTTC+TGG - chr2_2:751949-751968 Msa0229140:intron 35.0%
! ACATGTCAGACACCTTTTAA+AGG - chr2_2:751985-752004 Msa0229140:intron 35.0%
! TCTTAGTACACCTTTTTGTC+AGG - chr2_2:752437-752456 Msa0229140:CDS 35.0%
! CTTAGTACACCTTTTTGTCA+GGG - chr2_2:752438-752457 Msa0229140:CDS 35.0%
TCTAGATTACCCTGACAAAA+AGG + chr2_2:752450-752469 None:intergenic 35.0%
! AATCTCTAGAAGAGTAGCAT+CGG + chr2_2:752844-752863 None:intergenic 35.0%
TCTAGAGATTCTGCTTGATA+AGG - chr2_2:752854-752873 Msa0229140:intron 35.0%
ATTGTAACAGAGCATGAAGA+GGG + chr2_2:752889-752908 None:intergenic 35.0%
! TCTCAGTTAAAAGTGTGCAA+AGG - chr2_2:752951-752970 Msa0229140:intron 35.0%
ATTCCACCTGTTTAGATGAA+CGG + chr2_2:753058-753077 None:intergenic 35.0%
!! AAAGGTATTGGATTCTGGAA+AGG - chr2_2:753363-753382 Msa0229140:intron 35.0%
TGTCAGGTTTGTGATGTATA+TGG - chr2_2:753404-753423 Msa0229140:intron 35.0%
! TTCTTGTTATGATGATGCAG+AGG - chr2_2:753453-753472 Msa0229140:intron 35.0%
!! CTGTCTTGCCTTTTGAAAAA+TGG + chr2_2:753565-753584 None:intergenic 35.0%
!! CATTTTTCAAAAGGCAAGAC+AGG - chr2_2:753563-753582 Msa0229140:intron 35.0%
ACCATAACTTATGTCATTCC+GGG + chr2_2:753830-753849 None:intergenic 35.0%
GACCATAACTTATGTCATTC+CGG + chr2_2:753831-753850 None:intergenic 35.0%
TGACATAAGTTATGGTCCAA+AGG - chr2_2:753834-753853 Msa0229140:intron 35.0%
ACACTTTGACTATGGAAAAG+GGG + chr2_2:753946-753965 None:intergenic 35.0%
CACACTTTGACTATGGAAAA+GGG + chr2_2:753947-753966 None:intergenic 35.0%
GACACTTCTATATTGCTATG+AGG + chr2_2:754004-754023 None:intergenic 35.0%
ACAATCCAAAGATAAGAAGG+TGG - chr2_2:754100-754119 Msa0229140:intron 35.0%
ATGATCCACCTTCTTATCTT+TGG + chr2_2:754108-754127 None:intergenic 35.0%
ATACCTATTACTGGATGTGA+TGG - chr2_2:754233-754252 Msa0229140:intron 35.0%
GTTTGATATTCTTTGGCAGA+AGG - chr2_2:754268-754287 Msa0229140:intron 35.0%
AAACAAATTGCAGACATTGC+AGG - chr2_2:754291-754310 Msa0229140:intron 35.0%
ACTGGATGGTTATTTAGTCA+TGG - chr2_2:754326-754345 Msa0229140:intron 35.0%
CTATTTCAAGAATGTTCAGG+AGG + chr2_2:754379-754398 None:intergenic 35.0%
! CAGCTATTTCAAGAATGTTC+AGG + chr2_2:754382-754401 None:intergenic 35.0%
CTGAACATTCTTGAAATAGC+TGG - chr2_2:754380-754399 Msa0229140:intron 35.0%
TTGGGAAATAGAGAGTAGTA+GGG - chr2_2:754549-754568 Msa0229140:intron 35.0%
!! TATGAAGTGTTGCTAGAAAG+TGG + chr2_2:754693-754712 None:intergenic 35.0%
ATGAAGTGTATGATGCAACA+CGG - chr2_2:754712-754731 Msa0229140:intron 35.0%
TATGTTGGAATCATGGGTTT+AGG - chr2_2:754770-754789 Msa0229140:intron 35.0%
TTAAATCGAGAGAGGAAGAT+AGG + chr2_2:754849-754868 None:intergenic 35.0%
TCTTCCTCTCTCGATTTAAT+TGG - chr2_2:754850-754869 Msa0229140:intron 35.0%
ATCACCAATTAAATCGAGAG+AGG + chr2_2:754857-754876 None:intergenic 35.0%
TCTTGAGGAAATTGTTTCCA+TGG - chr2_2:754924-754943 Msa0229140:intron 35.0%
GTGGCCTTTACTTAATAATG+TGG + chr2_2:755080-755099 None:intergenic 35.0%
TGGGAGAATCTTAAATGACA+GGG - chr2_2:755185-755204 Msa0229140:CDS 35.0%
!!! CAAAAAGTGGACTAGTGTTT+TGG - chr2_2:755334-755353 Msa0229140:CDS 35.0%
ATGGACAGAGATTCATAAAC+CGG + chr2_2:755432-755451 None:intergenic 35.0%
AAGGACTTCTTCTTATCAAC+AGG - chr2_2:755599-755618 Msa0229140:CDS 35.0%
AGGACTTCTTCTTATCAACA+GGG - chr2_2:755600-755619 Msa0229140:CDS 35.0%
CAGTTGCATTTCCTTGTAAT+AGG - chr2_2:755712-755731 Msa0229140:intron 35.0%
!!! TTATGCCTTCTTTTTTTGCG+CGG - chr2_2:755847-755866 Msa0229140:intron 35.0%
!! CATGCTTTCCATTTTAGTAC+TGG - chr2_2:755988-756007 Msa0229140:intron 35.0%
CCTAACTTCCAGTACTAAAA+TGG + chr2_2:755999-756018 None:intergenic 35.0%
!! CCATTTTAGTACTGGAAGTT+AGG - chr2_2:755996-756015 Msa0229140:intron 35.0%
AAATTAATCCATGCAGGATG+TGG - chr2_2:756030-756049 Msa0229140:intron 35.0%
GGAACTTGAAAAAAATCCCA+TGG - chr2_2:756078-756097 Msa0229140:intron 35.0%
! TGATTCAAAGGTATGTTCCT+TGG + chr2_2:756176-756195 None:intergenic 35.0%
!! AGGAGCATGCAAAACTTTTA+AGG - chr2_2:756206-756225 Msa0229140:intron 35.0%
!!! TCAGTTTTTTGTTACACTGC+TGG - chr2_2:756237-756256 Msa0229140:intron 35.0%
TTTCTTATCAAGTGCCCTTA+GGG + chr2_2:756423-756442 None:intergenic 35.0%
CAAGTATAAGTGACACAATC+CGG - chr2_2:756713-756732 Msa0229140:intron 35.0%
TGGTACTTGAACCTTGATTA+TGG - chr2_2:756795-756814 Msa0229140:CDS 35.0%
CCTTCAAAGAACCATAATCA+AGG + chr2_2:756809-756828 None:intergenic 35.0%
CCTTGATTATGGTTCTTTGA+AGG - chr2_2:756806-756825 Msa0229140:CDS 35.0%
TGATTTATACAGAAGCGGTA+GGG + chr2_2:756926-756945 None:intergenic 35.0%
! TTCATGAGCTCAGAATTTTG+TGG - chr2_2:756947-756966 Msa0229140:CDS 35.0%
!!! TTTTGTGGTTCTAACACTAC+AGG - chr2_2:756962-756981 Msa0229140:CDS 35.0%
! TGCCCTAGAAAAATTTTCGA+AGG - chr2_2:757046-757065 Msa0229140:intron 35.0%
!! AGACTAACCATCTTTTTAGG+TGG - chr2_2:757303-757322 Msa0229140:intron 35.0%
TAGAAAGCCACCTAAAAAGA+TGG + chr2_2:757313-757332 None:intergenic 35.0%
!! CTCTCAATGGCTTTGTATAT+TGG - chr2_2:757763-757782 Msa0229140:CDS 35.0%
TTAGCATTCTCATCTTCCAT+AGG + chr2_2:757938-757957 None:intergenic 35.0%
TATGGAAGATGAGAATGCTA+AGG - chr2_2:757937-757956 Msa0229140:CDS 35.0%
GCGTCTCTTTCATAATTCAT+AGG + chr2_2:758142-758161 None:intergenic 35.0%
! CGAACAATACCTATGTGTTT+TGG - chr2_2:758253-758272 Msa0229140:intron 35.0%
! TTTTGGCATCCATAGGTTAT+AGG - chr2_2:758270-758289 Msa0229140:intron 35.0%
ATGCATTGAAGCAGATGAAA+AGG - chr2_2:758307-758326 Msa0229140:intron 35.0%
TGCATTGAAGCAGATGAAAA+GGG - chr2_2:758308-758327 Msa0229140:intron 35.0%
! GCTACTCTGATATTGGTTAT+CGG + chr2_2:758489-758508 None:intergenic 35.0%
CATGTTATTAGTTGAACCAG+GGG - chr2_2:758548-758567 Msa0229140:intron 35.0%
! CAATAATGTATCTTTTCCCC+TGG + chr2_2:758567-758586 None:intergenic 35.0%
ACAATCTCAACCATTGATCA+TGG - chr2_2:758622-758641 Msa0229140:intron 35.0%
CTACAATATGTGCTGAACTT+GGG - chr2_2:758723-758742 Msa0229140:intron 35.0%
ATATTGCTGAAACTACAACC+CGG - chr2_2:758749-758768 Msa0229140:intron 35.0%
! ACAAATTAGAGCTTTTGCTG+TGG - chr2_2:758875-758894 Msa0229140:intron 35.0%
! TACCTTATCTGAGGTTAATG+TGG - chr2_2:759396-759415 Msa0229140:CDS 35.0%
TACCACATTAACCTCAGATA+AGG + chr2_2:759401-759420 None:intergenic 35.0%
AGAGGGGGATAAAAAAAAAG+GGG + chr2_2:759432-759451 None:intergenic 35.0%
TCTCTTTGATCATGTAAGAG+GGG + chr2_2:759448-759467 None:intergenic 35.0%
GTCTCTTTGATCATGTAAGA+GGG + chr2_2:759449-759468 None:intergenic 35.0%
TGTCTCTTTGATCATGTAAG+AGG + chr2_2:759450-759469 None:intergenic 35.0%
TATCCCACTCTTCCAAACAA+TGG - chr2_2:746291-746310 Msa0229140:three_prime_UTR 40.0%
TTGCCATTGTTTGGAAGAGT+GGG + chr2_2:746297-746316 None:intergenic 40.0%
TTTGCCATTGTTTGGAAGAG+TGG + chr2_2:746298-746317 None:intergenic 40.0%
! TTGGATAGAGTTCGGGTTTA+CGG + chr2_2:746366-746385 None:intergenic 40.0%
! AAGTTGATTTAGGGCCCATT+TGG + chr2_2:747120-747139 None:intergenic 40.0%
TCTATTGATCTGACGGTTGA+CGG - chr2_2:747389-747408 Msa0229140:CDS 40.0%
GATTAACTAAAAGGGCAACC+TGG - chr2_2:747416-747435 Msa0229140:CDS 40.0%
CGTACAATACACCAAATGGT+GGG + chr2_2:747482-747501 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG + chr2_2:747508-747527 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG - chr2_2:747506-747525 Msa0229140:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG + chr2_2:747513-747532 None:intergenic 40.0%
AACAGCCTCTTGTGTAAAAC+AGG + chr2_2:747514-747533 None:intergenic 40.0%
!! ATGTTGCTGATTGTGCGTTT+TGG - chr2_2:747650-747669 Msa0229140:intron 40.0%
!! TGTTGCTGATTGTGCGTTTT+GGG - chr2_2:747651-747670 Msa0229140:intron 40.0%
! GGGAATGTTGAGGTTTTACT+TGG - chr2_2:747820-747839 Msa0229140:intron 40.0%
!! TGTTGAGGTTTTACTTGGTG+TGG - chr2_2:747825-747844 Msa0229140:intron 40.0%
!!! GTTGAGGTTTTACTTGGTGT+GGG - chr2_2:747826-747845 Msa0229140:intron 40.0%
CTTGCGTCATTTACTCATGA+TGG - chr2_2:747973-747992 Msa0229140:intron 40.0%
AATTCTGTTGGGAATTGGAC+TGG - chr2_2:748061-748080 Msa0229140:intron 40.0%
!!! CCTTTTTTGCCACTTACACA+TGG + chr2_2:748592-748611 None:intergenic 40.0%
CCATGTGTAAGTGGCAAAAA+AGG - chr2_2:748589-748608 Msa0229140:intron 40.0%
TCGTCATAAAGGTAGGTAAC+CGG + chr2_2:748816-748835 None:intergenic 40.0%
ATTCTTATTCCTGAGTGCGA+TGG - chr2_2:748843-748862 Msa0229140:intron 40.0%
AAGATTGAAACTGTGGAGTC+AGG + chr2_2:748915-748934 None:intergenic 40.0%
! TTTTGATAGGCGTAGTGCTA+AGG - chr2_2:748986-749005 Msa0229140:CDS 40.0%
GGGAAATACTGCATAGTTTG+TGG - chr2_2:749187-749206 Msa0229140:intron 40.0%
! ATAGTTTGTGGGCATGTGTT+TGG - chr2_2:749199-749218 Msa0229140:intron 40.0%
ACAGCACAAGCTATTGAATG+AGG + chr2_2:749406-749425 None:intergenic 40.0%
! AACTGATAGCGTACTTACCA+AGG - chr2_2:749450-749469 Msa0229140:intron 40.0%
CTCAAACATGTCTTACTGAG+CGG - chr2_2:749668-749687 Msa0229140:CDS 40.0%
TCAGTAGAAAGCAATGCTCA+AGG + chr2_2:749700-749719 None:intergenic 40.0%
ATGGTTACGACTCCCAATAA+TGG - chr2_2:749762-749781 Msa0229140:intron 40.0%
! CTCAAATTTTCATCTGCCTG+GGG + chr2_2:750043-750062 None:intergenic 40.0%
AAATTGCTGCCAAAGTCAAC+TGG + chr2_2:750325-750344 None:intergenic 40.0%
! TAGTGCTGAAATTGTCTGTG+CGG - chr2_2:750469-750488 Msa0229140:intron 40.0%
AGATGGTGTAAGCAACTGAT+AGG + chr2_2:750518-750537 None:intergenic 40.0%
! GATGTTGGTGAGCATTTATC+AGG + chr2_2:750555-750574 None:intergenic 40.0%
TTGCGGATATCCGAATATCT+CGG - chr2_2:750583-750602 Msa0229140:intron 40.0%
! GCAAATATTTCTGCTCGTGA+GGG + chr2_2:750717-750736 None:intergenic 40.0%
! TGCAAATATTTCTGCTCGTG+AGG + chr2_2:750718-750737 None:intergenic 40.0%
TGATGGTTACGGACGTATAA+TGG - chr2_2:751038-751057 Msa0229140:intron 40.0%
TGGTTGGGAGACAATTACAA+AGG - chr2_2:751505-751524 Msa0229140:intron 40.0%
AGCAGTTAAAGGATCAAGGA+CGG - chr2_2:751532-751551 Msa0229140:intron 40.0%
!! ACGAAAGTGTCGTTAGAGAA+GGG - chr2_2:751593-751612 Msa0229140:intron 40.0%
ACTGAAGAACATGGCTAAAG+TGG - chr2_2:751623-751642 Msa0229140:intron 40.0%
CTGAAGAACATGGCTAAAGT+GGG - chr2_2:751624-751643 Msa0229140:intron 40.0%
GAAGAAGCAATGAATGAGGA+GGG + chr2_2:751732-751751 None:intergenic 40.0%
! TGGAAGAGTTCTGACATACT+TGG - chr2_2:751833-751852 Msa0229140:intron 40.0%
! AAGAGTTCTGACATACTTGG+TGG - chr2_2:751836-751855 Msa0229140:intron 40.0%
AAAGAACAGTTCAAAGGTGG+TGG + chr2_2:751871-751890 None:intergenic 40.0%
ATTGGCATATGAAACGTGTC+AGG + chr2_2:751944-751963 None:intergenic 40.0%
! CAAGGTGTTTCCAGAAGTAT+TGG + chr2_2:751962-751981 None:intergenic 40.0%
!! AGGAATGTCCAAGAAGTGTT+TGG + chr2_2:752105-752124 None:intergenic 40.0%
AAAAATCTGGATGTGGTGTC+TGG - chr2_2:752568-752587 Msa0229140:intron 40.0%
! TGTCTGGATGTCCATTTTGT+TGG - chr2_2:752584-752603 Msa0229140:intron 40.0%
!! GTTGACTACTTTTGTGTAGG+AGG - chr2_2:752767-752786 Msa0229140:CDS 40.0%
TGCTAAGATAACTGCGTCAT+TGG - chr2_2:752812-752831 Msa0229140:intron 40.0%
! ATCTCTAGAAGAGTAGCATC+GGG + chr2_2:752843-752862 None:intergenic 40.0%
TTGTAACAGAGCATGAAGAG+GGG + chr2_2:752888-752907 None:intergenic 40.0%
GATTGTAACAGAGCATGAAG+AGG + chr2_2:752890-752909 None:intergenic 40.0%
TTCCACCTGTTTAGATGAAC+GGG + chr2_2:753057-753076 None:intergenic 40.0%
ATCGAATTGGGTGTGACTTA+GGG + chr2_2:753146-753165 None:intergenic 40.0%
CTTCTTCTCCTATGCTTAAC+AGG + chr2_2:753270-753289 None:intergenic 40.0%
AGAAGATACAGCCTTGATGA+AGG - chr2_2:753285-753304 Msa0229140:intron 40.0%
!! TGGCAAAAGGTATTGGATTC+TGG - chr2_2:753358-753377 Msa0229140:intron 40.0%
ATGGTTCCAAAGAACTCCAA+CGG + chr2_2:753482-753501 None:intergenic 40.0%
! TTTTCAAAAGGCAAGACAGG+TGG - chr2_2:753566-753585 Msa0229140:intron 40.0%
! TTTTCGACCAAATCATTGCC+TGG - chr2_2:753676-753695 Msa0229140:intron 40.0%
AACTCTTCCAGGCAATGATT+TGG + chr2_2:753686-753705 None:intergenic 40.0%
ATACACAACTCAACTCTTCC+AGG + chr2_2:753697-753716 None:intergenic 40.0%
ACCCGGAATGACATAAGTTA+TGG - chr2_2:753826-753845 Msa0229140:intron 40.0%
GCACACTTTGACTATGGAAA+AGG + chr2_2:753948-753967 None:intergenic 40.0%
GCAAATGCACACTTTGACTA+TGG + chr2_2:753954-753973 None:intergenic 40.0%
TGAGATAACAATGCTGTTGC+TGG - chr2_2:754155-754174 Msa0229140:intron 40.0%
GAGATAACAATGCTGTTGCT+GGG - chr2_2:754156-754175 Msa0229140:intron 40.0%
AGATAACAATGCTGTTGCTG+GGG - chr2_2:754157-754176 Msa0229140:intron 40.0%
ATGACTGCAGTATAGTAAGC+TGG + chr2_2:754215-754234 None:intergenic 40.0%
ACTGCAGTCATACCTATTAC+TGG - chr2_2:754224-754243 Msa0229140:intron 40.0%
TCACCATCACATCCAGTAAT+AGG + chr2_2:754239-754258 None:intergenic 40.0%
TCAAGAATGTTCAGGAGGTA+TGG + chr2_2:754374-754393 None:intergenic 40.0%
!! CTATTTCTATGGAGACAAGC+AGG + chr2_2:754411-754430 None:intergenic 40.0%
GTTGGGAAATAGAGAGTAGT+AGG - chr2_2:754548-754567 Msa0229140:intron 40.0%
TGGGAAATAGAGAGTAGTAG+GGG - chr2_2:754550-754569 Msa0229140:intron 40.0%
TGAAGTGTATGATGCAACAC+GGG - chr2_2:754713-754732 Msa0229140:intron 40.0%
! CATGGGTTTAGGATTTCTTG+AGG - chr2_2:754781-754800 Msa0229140:intron 40.0%
! GGTTTAGGATTTCTTGAGGT+GGG - chr2_2:754785-754804 Msa0229140:intron 40.0%
CAATTAACAGCGCACATATG+AGG + chr2_2:754826-754845 None:intergenic 40.0%
TTAAGTATGTGCGCATCTTG+AGG - chr2_2:754909-754928 Msa0229140:intron 40.0%
! GTTTCCATGGAGTTTCAAGT+TGG - chr2_2:754937-754956 Msa0229140:intron 40.0%
GAAACCAACTTGAAACTCCA+TGG + chr2_2:754944-754963 None:intergenic 40.0%
GTGGGAGAATCTTAAATGAC+AGG - chr2_2:755184-755203 Msa0229140:CDS 40.0%
AACCAGAATGCTCTCATTAC+AGG - chr2_2:755222-755241 Msa0229140:intron 40.0%
ACCAGAATGCTCTCATTACA+GGG - chr2_2:755223-755242 Msa0229140:intron 40.0%
CAGAGATGAGTGAAATGCAA+TGG - chr2_2:755388-755407 Msa0229140:CDS 40.0%
!!! TCTGTCCATGTTTTCTAGCT+TGG - chr2_2:755443-755462 Msa0229140:intron 40.0%
TCTGTCCAAGCTAGAAAACA+TGG + chr2_2:755451-755470 None:intergenic 40.0%
GCATTTCCTTGTAATAGGGA+TGG - chr2_2:755717-755736 Msa0229140:intron 40.0%
GTGAAACCATCCCTATTACA+AGG + chr2_2:755726-755745 None:intergenic 40.0%
AGGATGTGGCATTTCTTCTT+TGG - chr2_2:756044-756063 Msa0229140:intron 40.0%
AAAAAATCCCATGGCAAGCA+AGG - chr2_2:756087-756106 Msa0229140:intron 40.0%
AAAAATCCCATGGCAAGCAA+GGG - chr2_2:756088-756107 Msa0229140:intron 40.0%
TTTATTCGAGGACCATGAAG+TGG + chr2_2:756118-756137 None:intergenic 40.0%
AAATGCTAACAAGTGCCCTA+AGG - chr2_2:756405-756424 Msa0229140:intron 40.0%
AATGCTAACAAGTGCCCTAA+GGG - chr2_2:756406-756425 Msa0229140:intron 40.0%
GTTTCTTATCAAGTGCCCTT+AGG + chr2_2:756424-756443 None:intergenic 40.0%
ATTCCTTAACCATTGCCCTA+AGG - chr2_2:756544-756563 Msa0229140:intron 40.0%
TTCCTTAACCATTGCCCTAA+GGG - chr2_2:756545-756564 Msa0229140:intron 40.0%
TTTGCTAACCAATGCCCTTA+GGG + chr2_2:756562-756581 None:intergenic 40.0%
! TTTTGCTAACCAATGCCCTT+AGG + chr2_2:756563-756582 None:intergenic 40.0%
GATTTATACAGAAGCGGTAG+GGG + chr2_2:756925-756944 None:intergenic 40.0%
CTGATTTATACAGAAGCGGT+AGG + chr2_2:756927-756946 None:intergenic 40.0%
!! GAAGAGATGGTATTGGCTTA+AGG - chr2_2:756992-757011 Msa0229140:CDS 40.0%
! TTGGCTTAAGGTTTTTGCTC+TGG - chr2_2:757004-757023 Msa0229140:CDS 40.0%
AAGGAGAAGAAACCTCCAAT+AGG - chr2_2:757065-757084 Msa0229140:intron 40.0%
CACAACTCAAGCTGAATCTA+TGG - chr2_2:757218-757237 Msa0229140:intron 40.0%
CTATGGATGCCAAAACACAT+AGG + chr2_2:758265-758284 None:intergenic 40.0%
!!! CTATGTGTTTTGGCATCCAT+AGG - chr2_2:758263-758282 Msa0229140:intron 40.0%
GACAAATGGCCTATAACCTA+TGG + chr2_2:758282-758301 None:intergenic 40.0%
!! ATACCTCAGCTTTTTCTCGA+GGG + chr2_2:758367-758386 None:intergenic 40.0%
!! AATACCTCAGCTTTTTCTCG+AGG + chr2_2:758368-758387 None:intergenic 40.0%
! CTGATATTGGTTATCGGTGT+TGG + chr2_2:758483-758502 None:intergenic 40.0%
TGAACTGGCTACTCTGATAT+TGG + chr2_2:758496-758515 None:intergenic 40.0%
! GGAGCTTTAACCATGATCAA+TGG + chr2_2:758635-758654 None:intergenic 40.0%
! ATTTCTGGAGATAGAGGACT+TGG + chr2_2:758698-758717 None:intergenic 40.0%
!! GGCTTTATTTCTGGAGATAG+AGG + chr2_2:758704-758723 None:intergenic 40.0%
CCAAGTTCAGCACATATTGT+AGG + chr2_2:758725-758744 None:intergenic 40.0%
CCTACAATATGTGCTGAACT+TGG - chr2_2:758722-758741 Msa0229140:intron 40.0%
! CGAGATCGATTGTCTTTTCA+AGG - chr2_2:759271-759290 Msa0229140:CDS 40.0%
ATAAATAGGAAAGCGGTACG+AGG + chr2_2:759331-759350 None:intergenic 40.0%
GAGGGGGATAAAAAAAAAGG+GGG + chr2_2:759431-759450 None:intergenic 40.0%
CTCTTTGATCATGTAAGAGG+GGG + chr2_2:759447-759466 None:intergenic 40.0%
TGATCAAGGTGGAGAAGACA+TGG + chr2_2:746248-746267 None:intergenic 45.0%
TGTTTGGAAGAGTGGGATAG+TGG + chr2_2:746290-746309 None:intergenic 45.0%
CTGAGACGTTTGCCATTGTT+TGG + chr2_2:746306-746325 None:intergenic 45.0%
TACGGTAGTAACGGTTGTAG+AGG + chr2_2:746348-746367 None:intergenic 45.0%
! GTTCGGGTTTACGGTAGTAA+CGG + chr2_2:746357-746376 None:intergenic 45.0%
CATCGCATTGGATAGAGTTC+GGG + chr2_2:746373-746392 None:intergenic 45.0%
CCATCGCATTGGATAGAGTT+CGG + chr2_2:746374-746393 None:intergenic 45.0%
TCCAAAATCGTCCAGCTTCA+CGG - chr2_2:746469-746488 Msa0229140:CDS 45.0%
CTTCGATTATTCTCCTCCTC+CGG - chr2_2:746511-746530 Msa0229140:CDS 45.0%
GTAGGTTAATCGGAATGTCG+TGG - chr2_2:746572-746591 Msa0229140:CDS 45.0%
! GCAGACGAGAGTATGATCAT+CGG + chr2_2:746599-746618 None:intergenic 45.0%
CTGCGTTGTTCAAGATGGAA+CGG - chr2_2:746615-746634 Msa0229140:intron 45.0%
! GATTTAGGGCCCATTTGGAT+TGG + chr2_2:747115-747134 None:intergenic 45.0%
! CATGTATGCGACTTTAGAGG+TGG - chr2_2:747352-747371 Msa0229140:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr2_2:747483-747502 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr2_2:747486-747505 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr2_2:747517-747536 Msa0229140:intron 45.0%
!! GTTGCTGATTGTGCGTTTTG+GGG - chr2_2:747652-747671 Msa0229140:intron 45.0%
!!! GATTGTGCGTTTTGGGGAAA+TGG - chr2_2:747658-747677 Msa0229140:intron 45.0%
GGTTATTGAGCCGCAGTATA+CGG - chr2_2:747792-747811 Msa0229140:intron 45.0%
!!! GTTTTACTTGGTGTGGGAGA+TGG - chr2_2:747832-747851 Msa0229140:intron 45.0%
CGTCATTTACTCATGATGGC+CGG - chr2_2:747977-747996 Msa0229140:intron 45.0%
GTTACTACGTCGGATTTGAC+TGG - chr2_2:748006-748025 Msa0229140:intron 45.0%
!! TGACTGGTGTTATCATCGAG+AGG - chr2_2:748022-748041 Msa0229140:intron 45.0%
!! GACTGGTGTTATCATCGAGA+GGG - chr2_2:748023-748042 Msa0229140:intron 45.0%
GCGTGAATTCTGTTGGGAAT+TGG - chr2_2:748056-748075 Msa0229140:intron 45.0%
GGAAACACTTGCAAAGACAC+TGG - chr2_2:748250-748269 Msa0229140:intron 45.0%
CAACACTGTCATTGACACGT+AGG - chr2_2:748282-748301 Msa0229140:intron 45.0%
GGTGTAACCACATGTTGTGT+TGG - chr2_2:748339-748358 Msa0229140:intron 45.0%
TGAGGGATGTGCTTAAGTCT+TGG - chr2_2:748424-748443 Msa0229140:intron 45.0%
CTTTATGTACTACCGCTGTC+AGG - chr2_2:748668-748687 Msa0229140:CDS 45.0%
TGGATGCTGTTCTGCTTTAC+TGG - chr2_2:748754-748773 Msa0229140:intron 45.0%
GGATGCTGTTCTGCTTTACT+GGG - chr2_2:748755-748774 Msa0229140:intron 45.0%
!!! CTTTTAATGATGGGCCCTGA+TGG - chr2_2:748786-748805 Msa0229140:intron 45.0%
ACCAGATAACCGACATACAG+TGG + chr2_2:749075-749094 None:intergenic 45.0%
!!! GCTTGTGCTGTTTTCTCTTG+TGG - chr2_2:749415-749434 Msa0229140:intron 45.0%
AAACATGTCTTACTGAGCGG+TGG - chr2_2:749671-749690 Msa0229140:CDS 45.0%
AACATGTCTTACTGAGCGGT+GGG - chr2_2:749672-749691 Msa0229140:CDS 45.0%
ATGAAGGAAACCAGCATTCG+TGG - chr2_2:749859-749878 Msa0229140:intron 45.0%
TGAAGGAAACCAGCATTCGT+GGG - chr2_2:749860-749879 Msa0229140:intron 45.0%
TGTAAAACACCCACGAATGC+TGG + chr2_2:749872-749891 None:intergenic 45.0%
CTTACACCATCTGTCCTGAT+TGG - chr2_2:750526-750545 Msa0229140:intron 45.0%
CATTTATCAGGCGACCAATC+AGG + chr2_2:750543-750562 None:intergenic 45.0%
ACCAACATCTGCTTGCATTG+CGG - chr2_2:750566-750585 Msa0229140:intron 45.0%
!! TGAGGGCATGCTCTTTTCAA+AGG + chr2_2:750942-750961 None:intergenic 45.0%
GCAGTTAAAGGATCAAGGAC+GGG - chr2_2:751533-751552 Msa0229140:intron 45.0%
!! GACGAAAGTGTCGTTAGAGA+AGG - chr2_2:751592-751611 Msa0229140:intron 45.0%
TGTCGTTAGAGAAGGGAGTA+GGG - chr2_2:751600-751619 Msa0229140:intron 45.0%
CAATGAATGAGGAGGGCTAA+GGG + chr2_2:751725-751744 None:intergenic 45.0%
GGAAGAAGCAATGAATGAGG+AGG + chr2_2:751733-751752 None:intergenic 45.0%
! CTGACATACTTGGTGGATAC+AGG - chr2_2:751843-751862 Msa0229140:intron 45.0%
CATATGAAACGTGTCAGGCA+CGG + chr2_2:751939-751958 None:intergenic 45.0%
AGGTGTCTGACATGTGTTCA+AGG + chr2_2:751980-751999 None:intergenic 45.0%
CACACCTGTTAGACATGTGT+TGG - chr2_2:752042-752061 Msa0229140:intron 45.0%
GTGTCCAACACATGTCTAAC+AGG + chr2_2:752049-752068 None:intergenic 45.0%
TTAGACATGTGTTGGACACG+TGG - chr2_2:752050-752069 Msa0229140:intron 45.0%
!! GACTACTTTTGTGTAGGAGG+TGG - chr2_2:752770-752789 Msa0229140:CDS 45.0%
TGTAACAGAGCATGAAGAGG+GGG + chr2_2:752887-752906 None:intergenic 45.0%
GCTGCTCATGCAGACAAAAA+TGG - chr2_2:752993-753012 Msa0229140:intron 45.0%
CAAGCAAGGCAGCTAACTTT+CGG + chr2_2:753022-753041 None:intergenic 45.0%
TCCACCTGTTTAGATGAACG+GGG + chr2_2:753056-753075 None:intergenic 45.0%
CATCGAATTGGGTGTGACTT+AGG + chr2_2:753147-753166 None:intergenic 45.0%
CTAAGTCACACCCAATTCGA+TGG - chr2_2:753145-753164 Msa0229140:intron 45.0%
CAGAAACCAGCCATCGAATT+GGG + chr2_2:753158-753177 None:intergenic 45.0%
GTTCCTCTCCTGTTAAGCAT+AGG - chr2_2:753259-753278 Msa0229140:intron 45.0%
TCTCCTATGCTTAACAGGAG+AGG + chr2_2:753265-753284 None:intergenic 45.0%
ACATTCAGTCGCCTTCATCA+AGG + chr2_2:753299-753318 None:intergenic 45.0%
TTGATGAAGGCGACTGAATG+TGG - chr2_2:753298-753317 Msa0229140:intron 45.0%
!! GGAGTTCTTTGGAACCATAC+AGG - chr2_2:753484-753503 Msa0229140:intron 45.0%
TGCTAATTGTCTGGCCTGTA+TGG + chr2_2:753501-753520 None:intergenic 45.0%
TACAGGCCAGACAATTAGCA+CGG - chr2_2:753501-753520 Msa0229140:intron 45.0%
TAAGTCCCGTGCTAATTGTC+TGG + chr2_2:753510-753529 None:intergenic 45.0%
!! CAGTGCTACTTATGCACTCT+TGG - chr2_2:753753-753772 Msa0229140:intron 45.0%
TGGCAGAACAAAGATGCCTT+TGG + chr2_2:753853-753872 None:intergenic 45.0%
GACTATGGAAAAGGGGACAA+AGG + chr2_2:753939-753958 None:intergenic 45.0%
TGCAATTTAGAAGCAGGCAG+AGG - chr2_2:754490-754509 Msa0229140:intron 45.0%
AAAGCTAAGTGGCAGGAGTT+GGG - chr2_2:754531-754550 Msa0229140:intron 45.0%
GGGAAATAGAGAGTAGTAGG+GGG - chr2_2:754551-754570 Msa0229140:intron 45.0%
TAGGGGGTCACAAATCACAA+TGG - chr2_2:754567-754586 Msa0229140:intron 45.0%
AGGGGGTCACAAATCACAAT+GGG - chr2_2:754568-754587 Msa0229140:intron 45.0%
! GGGTTTAGGATTTCTTGAGG+TGG - chr2_2:754784-754803 Msa0229140:intron 45.0%
ACAAGAGTGAGACATGGCAA+GGG - chr2_2:755139-755158 Msa0229140:CDS 45.0%
! GGCAAGGGCATATTCTATGA+AGG - chr2_2:755154-755173 Msa0229140:CDS 45.0%
!! TCCCTGTAATGAGAGCATTC+TGG + chr2_2:755227-755246 None:intergenic 45.0%
!!! AAGTGGACTAGTGTTTTGGG+AGG - chr2_2:755338-755357 Msa0229140:CDS 45.0%
!!! CTTCTTTTTTTGCGCGGAAG+CGG - chr2_2:755853-755872 Msa0229140:intron 45.0%
AAGAAATGCCACATCCTGCA+TGG + chr2_2:756041-756060 None:intergenic 45.0%
! TGGTCACTTCAAGTTCATGC+TGG + chr2_2:756669-756688 None:intergenic 45.0%
ACTTGAAGTGACCACAAAGC+AGG - chr2_2:756675-756694 Msa0229140:intron 45.0%
CACAAAAATGGCCTGCTTTG+TGG + chr2_2:756689-756708 None:intergenic 45.0%
!!! CACAAAGCAGGCCATTTTTG+TGG - chr2_2:756687-756706 Msa0229140:intron 45.0%
AATCCGGACTTGTATTGTCC+TGG - chr2_2:756729-756748 Msa0229140:intron 45.0%
ATCCGGACTTGTATTGTCCT+GGG - chr2_2:756730-756749 Msa0229140:intron 45.0%
TTCCCAGGACAATACAAGTC+CGG + chr2_2:756735-756754 None:intergenic 45.0%
! GGTTCTAACACTACAGGTGT+CGG - chr2_2:756968-756987 Msa0229140:CDS 45.0%
TGTCGGAGAAGAGATGGTAT+TGG - chr2_2:756985-757004 Msa0229140:CDS 45.0%
! TTTTGCTCTGGCCACAATCA+AGG - chr2_2:757016-757035 Msa0229140:CDS 45.0%
! AATACAACCTGCTTGCTGAG+TGG + chr2_2:757196-757215 None:intergenic 45.0%
!! GTGGCTTTCTAGTTGCAGTT+TGG - chr2_2:757322-757341 Msa0229140:intron 45.0%
TGATTCAGTACAACGTGCAG+TGG - chr2_2:757526-757545 Msa0229140:intron 45.0%
AGGTTATAGGCCATTTGTCG+AGG - chr2_2:758283-758302 Msa0229140:intron 45.0%
TCAATGCATGCCTCGACAAA+TGG + chr2_2:758296-758315 None:intergenic 45.0%
TAGAGGACTTGGCATCTCAA+TGG + chr2_2:758687-758706 None:intergenic 45.0%
GTCGTATGCTCGAATTGGTA+TGG - chr2_2:759138-759157 Msa0229140:CDS 45.0%
TCAAAAGACGGTGAGTTGCT+TGG - chr2_2:759190-759209 Msa0229140:CDS 45.0%
!!! ATGATATAAATTTAAAATTA+TGG + chr2_2:748487-748506 None:intergenic 5.0%
!!! TTTAATATTTTTTTAGTAAT+TGG - chr2_2:758048-758067 Msa0229140:CDS 5.0%
CCGAACTCTATCCAATGCGA+TGG - chr2_2:746371-746390 Msa0229140:three_prime_UTR 50.0%
TCGACGTGTTTCCATCGCAT+TGG + chr2_2:746385-746404 None:intergenic 50.0%
! TTTGGAATCGTCGCGGATCA+CGG + chr2_2:746455-746474 None:intergenic 50.0%
!!! GGACGATTTTGGAATCGTCG+CGG + chr2_2:746462-746481 None:intergenic 50.0%
ATTCCGATTAACCTACCGCC+GGG + chr2_2:746568-746587 None:intergenic 50.0%
CATTCCGATTAACCTACCGC+CGG + chr2_2:746569-746588 None:intergenic 50.0%
CTCGTCTGCGTTGTTCAAGA+TGG - chr2_2:746610-746629 Msa0229140:intron 50.0%
! ACAAGAGGCTGTTTCCAGGA+CGG - chr2_2:747521-747540 Msa0229140:intron 50.0%
GCAGTTAATCACAACCGTCC+TGG + chr2_2:747538-747557 None:intergenic 50.0%
AAACCCTAACGCGGTGAAGT+TGG - chr2_2:747732-747751 Msa0229140:intron 50.0%
TCAATAACCGCCATACACCG+TGG + chr2_2:747781-747800 None:intergenic 50.0%
TTCCCAGACACCGTATACTG+CGG + chr2_2:747805-747824 None:intergenic 50.0%
TACGGTGTCTGGGAATGTTG+AGG - chr2_2:747810-747829 Msa0229140:intron 50.0%
!! TTACTTGGTGTGGGAGATGG+TGG - chr2_2:747835-747854 Msa0229140:intron 50.0%
GTGATTGCAGTTGAGGAGGA+CGG - chr2_2:747877-747896 Msa0229140:intron 50.0%
!! CTTGGTGGTGAGATGCTAAG+AGG - chr2_2:747910-747929 Msa0229140:intron 50.0%
AAGAGGACCGTTGCAGAAGA+TGG - chr2_2:747927-747946 Msa0229140:intron 50.0%
GACACCACCATCTTCTGCAA+CGG + chr2_2:747937-747956 None:intergenic 50.0%
! TGCAGAAGATGGTGGTGTCA+CGG - chr2_2:747938-747957 Msa0229140:intron 50.0%
CCGACGTAGTAACAAGAAGC+CGG + chr2_2:747999-748018 None:intergenic 50.0%
CCGGCTTCTTGTTACTACGT+CGG - chr2_2:747996-748015 Msa0229140:intron 50.0%
CGAGGTGCGTGAATTCTGTT+GGG - chr2_2:748050-748069 Msa0229140:intron 50.0%
ACTTGCAAAGACACTGGCAC+TGG - chr2_2:748256-748275 Msa0229140:intron 50.0%
CTTGCAAAGACACTGGCACT+GGG - chr2_2:748257-748276 Msa0229140:intron 50.0%
! GCTAGAGCACCATGTGTAAG+TGG - chr2_2:748580-748599 Msa0229140:intron 50.0%
! AGGTAACCGGTTCTCCATCA+GGG + chr2_2:748803-748822 None:intergenic 50.0%
! TAGGTAACCGGTTCTCCATC+AGG + chr2_2:748804-748823 None:intergenic 50.0%
GAGGTGTAGCCACTGTATGT+CGG - chr2_2:749063-749082 Msa0229140:CDS 50.0%
! GCCACTGTATGTCGGTTATC+TGG - chr2_2:749071-749090 Msa0229140:intron 50.0%
GATAAGATCGTCCCTTCCTG+AGG - chr2_2:750066-750085 Msa0229140:intron 50.0%
TGCTTCAACAGCCTCAGGAA+GGG + chr2_2:750080-750099 None:intergenic 50.0%
ATGCTTCAACAGCCTCAGGA+AGG + chr2_2:750081-750100 None:intergenic 50.0%
ACACATGCTTCAACAGCCTC+AGG + chr2_2:750085-750104 None:intergenic 50.0%
! GAAGCATGTGTTGATGCTGC+AGG - chr2_2:750094-750113 Msa0229140:intron 50.0%
TCCTAAGGGCAGCCAGTTAT+GGG - chr2_2:750149-750168 Msa0229140:CDS 50.0%
ACAAAAGGCCTGCCCATAAC+TGG + chr2_2:750164-750183 None:intergenic 50.0%
! GTTATGGGCAGGCCTTTTGT+AGG - chr2_2:750164-750183 Msa0229140:intron 50.0%
TCCGCAATGCAAGCAGATGT+TGG + chr2_2:750570-750589 None:intergenic 50.0%
TTGCATTACTTGCCGAGTCC+TGG - chr2_2:750733-750752 Msa0229140:intron 50.0%
AGGCAGAAAAGTCCAGGACT+CGG + chr2_2:750748-750767 None:intergenic 50.0%
GGTATGAGCTTGAAGCAGAG+TGG - chr2_2:751570-751589 Msa0229140:intron 50.0%
! GTGTCGTTAGAGAAGGGAGT+AGG - chr2_2:751599-751618 Msa0229140:intron 50.0%
GGAGTAGGGACTGAAGAACA+TGG - chr2_2:751614-751633 Msa0229140:intron 50.0%
GGAGGGCTAAGGGATAGAAA+GGG + chr2_2:751715-751734 None:intergenic 50.0%
AGGAGGGCTAAGGGATAGAA+AGG + chr2_2:751716-751735 None:intergenic 50.0%
GCAATGAATGAGGAGGGCTA+AGG + chr2_2:751726-751745 None:intergenic 50.0%
ACTGAGTCAACACCTGCTCT+TGG - chr2_2:752079-752098 Msa0229140:intron 50.0%
!! AGAAGTGTTTGGCCAAGAGC+AGG + chr2_2:752094-752113 None:intergenic 50.0%
GCTCTTGGCCAAACACTTCT+TGG - chr2_2:752094-752113 Msa0229140:intron 50.0%
! AGGAGGTGGTGATAATGCAC+TGG - chr2_2:752784-752803 Msa0229140:intron 50.0%
! GGAGGTGGTGATAATGCACT+GGG - chr2_2:752785-752804 Msa0229140:intron 50.0%
ATGAGCAGCAACTGCTGCAT+AGG + chr2_2:752982-753001 None:intergenic 50.0%
GGGTTCGTGTTCAACAAGCA+AGG + chr2_2:753036-753055 None:intergenic 50.0%
CGAACCCCGTTCATCTAAAC+AGG - chr2_2:753049-753068 Msa0229140:intron 50.0%
ACCCCGTTCATCTAAACAGG+TGG - chr2_2:753052-753071 Msa0229140:intron 50.0%
TGGGTGTGACTTAGGGATGA+GGG + chr2_2:753139-753158 None:intergenic 50.0%
TTGGGTGTGACTTAGGGATG+AGG + chr2_2:753140-753159 None:intergenic 50.0%
CCAGAAACCAGCCATCGAAT+TGG + chr2_2:753159-753178 None:intergenic 50.0%
!! CCAATTCGATGGCTGGTTTC+TGG - chr2_2:753156-753175 Msa0229140:intron 50.0%
!! TTCGATGGCTGGTTTCTGGT+TGG - chr2_2:753160-753179 Msa0229140:intron 50.0%
AGGCAACCGTTGGAGTTCTT+TGG - chr2_2:753473-753492 Msa0229140:intron 50.0%
ACAGGCCAGACAATTAGCAC+GGG - chr2_2:753502-753521 Msa0229140:intron 50.0%
AAGGGGACAAAGGTTGACAG+CGG + chr2_2:753929-753948 None:intergenic 50.0%
!! TGGGGCACTGGAATAGTTTG+TGG - chr2_2:754175-754194 Msa0229140:intron 50.0%
TGCAGGACTCGATGAAGAAC+TGG - chr2_2:754308-754327 Msa0229140:intron 50.0%
GGACTCGATGAAGAACTGGA+TGG - chr2_2:754312-754331 Msa0229140:intron 50.0%
TTTAGAAGCAGGCAGAGGTG+CGG - chr2_2:754495-754514 Msa0229140:intron 50.0%
GGCAACAAGGGAAAGCTAAG+TGG - chr2_2:754520-754539 Msa0229140:intron 50.0%
ACAAGGGAAAGCTAAGTGGC+AGG - chr2_2:754524-754543 Msa0229140:intron 50.0%
GAAAGCTAAGTGGCAGGAGT+TGG - chr2_2:754530-754549 Msa0229140:intron 50.0%
AGTGTATGATGCAACACGGG+TGG - chr2_2:754716-754735 Msa0229140:intron 50.0%
GAGGTGGGTGATGAAGTATG+TGG - chr2_2:754800-754819 Msa0229140:intron 50.0%
TGCCACACAAGAGTGAGACA+TGG - chr2_2:755133-755152 Msa0229140:intron 50.0%
TGCCATGTCTCACTCTTGTG+TGG + chr2_2:755138-755157 None:intergenic 50.0%
CACAAGAGTGAGACATGGCA+AGG - chr2_2:755138-755157 Msa0229140:CDS 50.0%
CGCTTCCGCGCAAAAAAAGA+AGG + chr2_2:755855-755874 None:intergenic 50.0%
AGCAAGGGATCTCCACTTCA+TGG - chr2_2:756103-756122 Msa0229140:intron 50.0%
TGCCCTTAGGGCAATGGTTA+AGG + chr2_2:756550-756569 None:intergenic 50.0%
! AACCATTGCCCTAAGGGCAT+TGG - chr2_2:756551-756570 Msa0229140:intron 50.0%
AACCAATGCCCTTAGGGCAA+TGG + chr2_2:756556-756575 None:intergenic 50.0%
GCGGTAGGGGTCATAAAAAG+TGG + chr2_2:756912-756931 None:intergenic 50.0%
!! TACAGGTGTCGGAGAAGAGA+TGG - chr2_2:756979-756998 Msa0229140:CDS 50.0%
TCTGGCCACAATCAAGGACT+GGG - chr2_2:757022-757041 Msa0229140:intron 50.0%
TCTCGAGGGTCTGCAAGTTT+GGG + chr2_2:758353-758372 None:intergenic 50.0%
TTCTCGAGGGTCTGCAAGTT+TGG + chr2_2:758354-758373 None:intergenic 50.0%
AGACCCTCGAGAAAAAGCTG+AGG - chr2_2:758361-758380 Msa0229140:intron 50.0%
GGACAGTCGTATGCTCGAAT+TGG - chr2_2:759133-759152 Msa0229140:CDS 50.0%
TGCTCGAATTGGTATGGCCA+AGG - chr2_2:759144-759163 Msa0229140:CDS 50.0%
GCTGCTGCACAGTCAAAAGA+CGG - chr2_2:759178-759197 Msa0229140:CDS 50.0%
AAGACGGTGAGTTGCTTGGT+CGG - chr2_2:759194-759213 Msa0229140:CDS 50.0%
TACGAGGAGGCAGAAAAGTC+AGG + chr2_2:759315-759334 None:intergenic 50.0%
AATAGGAAAGCGGTACGAGG+AGG + chr2_2:759328-759347 None:intergenic 50.0%
GGCAAACGTCTCAGTTGCAG+CGG - chr2_2:746312-746331 Msa0229140:three_prime_UTR 55.0%
GGAAACACGTCGACCTTGCT+CGG - chr2_2:746392-746411 Msa0229140:three_prime_UTR 55.0%
! CGGCGATTTTGTTCCGAGCA+AGG + chr2_2:746408-746427 None:intergenic 55.0%
AAAATCGCCGCCGCTCCTTT+CGG - chr2_2:746418-746437 Msa0229140:three_prime_UTR 55.0%
! GCCGTGAAGCTGGACGATTT+TGG + chr2_2:746473-746492 None:intergenic 55.0%
TTCACGGCGAGTCTGCTCTT+CGG - chr2_2:746485-746504 Msa0229140:CDS 55.0%
AACCCCGGCGGTAGGTTAAT+CGG - chr2_2:746562-746581 Msa0229140:CDS 55.0%
TTCCGATTAACCTACCGCCG+GGG + chr2_2:746567-746586 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - chr2_2:747442-747461 Msa0229140:CDS 55.0%
CTAGAGCTCCCGCATATGCA+GGG - chr2_2:747443-747462 Msa0229140:CDS 55.0%
CAGCCAACTTCACCGCGTTA+GGG + chr2_2:747738-747757 None:intergenic 55.0%
TCAGCCAACTTCACCGCGTT+AGG + chr2_2:747739-747758 None:intergenic 55.0%
ATAACCGCCATACACCGTGG+CGG + chr2_2:747778-747797 None:intergenic 55.0%
AGCCGCAGTATACGGTGTCT+GGG - chr2_2:747800-747819 Msa0229140:intron 55.0%
AGGACCGTTGCAGAAGATGG+TGG - chr2_2:747930-747949 Msa0229140:intron 55.0%
!! GCAGAAGATGGTGGTGTCAC+GGG - chr2_2:747939-747958 Msa0229140:intron 55.0%
!! AAGATGGTGGTGTCACGGGA+TGG - chr2_2:747943-747962 Msa0229140:intron 55.0%
!! AGATGGTGGTGTCACGGGAT+GGG - chr2_2:747944-747963 Msa0229140:intron 55.0%
! TATCATCGAGAGGGAGTGCG+AGG - chr2_2:748032-748051 Msa0229140:intron 55.0%
GCGAGGTGCGTGAATTCTGT+TGG - chr2_2:748049-748068 Msa0229140:intron 55.0%
! TTCCTCCAGAGCAGCTTGCT+TGG - chr2_2:748724-748743 Msa0229140:CDS 55.0%
!! GCAGCTTGCTTGGTGTGGAA+TGG - chr2_2:748734-748753 Msa0229140:CDS 55.0%
TTCCTGAGTGCGATGGAGTG+AGG - chr2_2:748850-748869 Msa0229140:intron 55.0%
ATCCTCACTCCATCGCACTC+AGG + chr2_2:748855-748874 None:intergenic 55.0%
GCGTCATACAGCAAAGCTGC+GGG + chr2_2:748957-748976 None:intergenic 55.0%
CGCGTCATACAGCAAAGCTG+CGG + chr2_2:748958-748977 None:intergenic 55.0%
GCGCCAACGAACTCTCCTAA+GGG - chr2_2:750135-750154 Msa0229140:CDS 55.0%
CTGCCCTTAGGAGAGTTCGT+TGG + chr2_2:750141-750160 None:intergenic 55.0%
CTCCTAAGGGCAGCCAGTTA+TGG - chr2_2:750148-750167 Msa0229140:CDS 55.0%
!! GCAGTGCGCAGCTTTGAGAT+CGG - chr2_2:750394-750413 Msa0229140:intron 55.0%
AGGCGACCAATCAGGACAGA+TGG + chr2_2:750535-750554 None:intergenic 55.0%
! AGGATCAAGGACGGGCTCAT+AGG - chr2_2:751541-751560 Msa0229140:intron 55.0%
! GGATCAAGGACGGGCTCATA+GGG - chr2_2:751542-751561 Msa0229140:intron 55.0%
ACAGAGCATGAAGAGGGGGA+GGG + chr2_2:752883-752902 None:intergenic 55.0%
AACAGAGCATGAAGAGGGGG+AGG + chr2_2:752884-752903 None:intergenic 55.0%
GCAAGGCAGCTAACTTTCGG+CGG + chr2_2:753019-753038 None:intergenic 55.0%
GGGTGTGACTTAGGGATGAG+GGG + chr2_2:753138-753157 None:intergenic 55.0%
GTCACACCCAATTCGATGGC+TGG - chr2_2:753149-753168 Msa0229140:intron 55.0%
GATGATGCAGAGGCAACCGT+TGG - chr2_2:753463-753482 Msa0229140:intron 55.0%
! AGAGGTGCGGTTGGCAACAA+GGG - chr2_2:754508-754527 Msa0229140:intron 55.0%
GGAGATCCCTTGCTTGCCAT+GGG + chr2_2:756097-756116 None:intergenic 55.0%
TGGAGATCCCTTGCTTGCCA+TGG + chr2_2:756098-756117 None:intergenic 55.0%
ACGCAGCTCGATGATTTCCC+AGG + chr2_2:756750-756769 None:intergenic 55.0%
CTCTGGCCACAATCAAGGAC+TGG - chr2_2:757021-757040 Msa0229140:intron 55.0%
TCACATGCCACTCAGCAAGC+AGG - chr2_2:757186-757205 Msa0229140:intron 55.0%
TGGTATGGCCAAGGAAGCTG+CGG - chr2_2:759153-759172 Msa0229140:CDS 55.0%
ACGTCTCAGTTGCAGCGGAG+TGG - chr2_2:746317-746336 Msa0229140:three_prime_UTR 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr2_2:747454-747473 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr2_2:747455-747474 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr2_2:747454-747473 Msa0229140:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr2_2:747455-747474 Msa0229140:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr2_2:747470-747489 None:intergenic 60.0%
CGCGGTGAAGTTGGCTGATC+CGG - chr2_2:747741-747760 Msa0229140:intron 60.0%
GCGGTGAAGTTGGCTGATCC+GGG - chr2_2:747742-747761 Msa0229140:intron 60.0%
CGGTGAAGTTGGCTGATCCG+GGG - chr2_2:747743-747762 Msa0229140:intron 60.0%
GTTGGCTGATCCGGGGATTG+TGG - chr2_2:747750-747769 Msa0229140:intron 60.0%
GAGCCGCAGTATACGGTGTC+TGG - chr2_2:747799-747818 Msa0229140:intron 60.0%
! TGGTGTGGGAGATGGTGGTG+AGG - chr2_2:747840-747859 Msa0229140:intron 60.0%
! TGTGGGAGATGGTGGTGAGG+AGG - chr2_2:747843-747862 Msa0229140:intron 60.0%
! TGGTGGTGAGGAGGAGGATG+CGG - chr2_2:747852-747871 Msa0229140:intron 60.0%
TGCGGCGGTGATTGCAGTTG+AGG - chr2_2:747870-747889 Msa0229140:intron 60.0%
GGCGGTGATTGCAGTTGAGG+AGG - chr2_2:747873-747892 Msa0229140:intron 60.0%
TTGAGGAGGACGGTGTGCAG+AGG - chr2_2:747887-747906 Msa0229140:intron 60.0%
!! TGGTGTCACGGGATGGGAAG+TGG - chr2_2:747950-747969 Msa0229140:intron 60.0%
CACCAAGCAAGCTGCTCTGG+AGG + chr2_2:748729-748748 None:intergenic 60.0%
CCACACCAAGCAAGCTGCTC+TGG + chr2_2:748732-748751 None:intergenic 60.0%
! CCAGAGCAGCTTGCTTGGTG+TGG - chr2_2:748729-748748 Msa0229140:CDS 60.0%
GATGGGCCCTGATGGAGAAC+CGG - chr2_2:748794-748813 Msa0229140:intron 60.0%
CGCGCCAACGAACTCTCCTA+AGG - chr2_2:750134-750153 Msa0229140:CDS 60.0%
GCCCATAACTGGCTGCCCTT+AGG + chr2_2:750153-750172 None:intergenic 60.0%
AAGGGCAGCCAGTTATGGGC+AGG - chr2_2:750153-750172 Msa0229140:CDS 60.0%
TCAGGCACGGCACATTGGAG+AGG + chr2_2:751926-751945 None:intergenic 60.0%
ACGTGTCAGGCACGGCACAT+TGG + chr2_2:751931-751950 None:intergenic 60.0%
CAGAGCATGAAGAGGGGGAG+GGG + chr2_2:752882-752901 None:intergenic 60.0%
GGGACAAAGGTTGACAGCGG+TGG + chr2_2:753926-753945 None:intergenic 60.0%
CAATGCTGTTGCTGGGGCAC+TGG - chr2_2:754163-754182 Msa0229140:intron 60.0%
! CAGAGGTGCGGTTGGCAACA+AGG - chr2_2:754507-754526 Msa0229140:intron 60.0%
TGATGCAACACGGGTGGCTG+TGG - chr2_2:754722-754741 Msa0229140:intron 60.0%
GGCAGCCCAGTCCTTGATTG+TGG + chr2_2:757030-757049 None:intergenic 60.0%
AGCAGCATCCGCAGCTTCCT+TGG + chr2_2:759164-759183 None:intergenic 60.0%
GAGTGGACCGCCGAAAGGAG+CGG + chr2_2:746431-746450 None:intergenic 65.0%
GAGCAGACTCGCCGTGAAGC+TGG + chr2_2:746483-746502 None:intergenic 65.0%
!! GGTGTCGGCGAGGAGATGAC+CGG + chr2_2:746533-746552 None:intergenic 65.0%
ATCTCCTCGCCGACACCGTC+TGG - chr2_2:746536-746555 Msa0229140:CDS 65.0%
! TGCGGGAGCTCTAGTGCACC+AGG + chr2_2:747437-747456 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr2_2:747448-747467 Msa0229140:CDS 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr2_2:747449-747468 Msa0229140:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr2_2:747453-747472 Msa0229140:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr2_2:747468-747487 Msa0229140:intron 65.0%
TGTGGAGCCGCCACGGTGTA+TGG - chr2_2:747768-747787 Msa0229140:intron 65.0%
! GGGAGATGGTGGTGAGGAGG+AGG - chr2_2:747846-747865 Msa0229140:intron 65.0%
TGGTGAGGAGGAGGATGCGG+CGG - chr2_2:747855-747874 Msa0229140:intron 65.0%
GAGGACGGTGTGCAGAGGCT+TGG - chr2_2:747892-747911 Msa0229140:intron 65.0%
GACGGTGTGCAGAGGCTTGG+TGG - chr2_2:747895-747914 Msa0229140:intron 65.0%
! GGACGGGCTCATAGGGTGCT+TGG - chr2_2:751549-751568 Msa0229140:intron 65.0%
! GAAGCAGGCAGAGGTGCGGT+TGG - chr2_2:754499-754518 Msa0229140:intron 65.0%
ATCGCCGCCGCTCCTTTCGG+CGG - chr2_2:746421-746440 Msa0229140:three_prime_UTR 70.0%
TGGACCGCCGAAAGGAGCGG+CGG + chr2_2:746428-746447 None:intergenic 70.0%
ACGGCGAGTGGACCGCCGAA+AGG + chr2_2:746436-746455 None:intergenic 70.0%
TCGTCGCGGATCACGGCGAG+TGG + chr2_2:746448-746467 None:intergenic 70.0%
GGCGAGGAGATGACCGGAGG+AGG + chr2_2:746527-746546 None:intergenic 70.0%
GTCGGCGAGGAGATGACCGG+AGG + chr2_2:746530-746549 None:intergenic 70.0%
TCCTCGCCGACACCGTCTGG+CGG - chr2_2:746539-746558 Msa0229140:CDS 70.0%
GGGGTTCCGCCAGACGGTGT+CGG + chr2_2:746548-746567 None:intergenic 70.0%
GACACCGTCTGGCGGAACCC+CGG - chr2_2:746547-746566 Msa0229140:CDS 70.0%
CGTGGCGGCTCCACAATCCC+CGG + chr2_2:747763-747782 None:intergenic 70.0%
CGGGGATTGTGGAGCCGCCA+CGG - chr2_2:747761-747780 Msa0229140:intron 70.0%
GGAGCCGCCACGGTGTATGG+CGG - chr2_2:747771-747790 Msa0229140:intron 70.0%
!! TCCGCCAGACGGTGTCGGCG+AGG + chr2_2:746543-746562 None:intergenic 75.0%
ACCGTCTGGCGGAACCCCGG+CGG - chr2_2:746550-746569 Msa0229140:CDS 75.0%
ACCGCCGGGGTTCCGCCAGA+CGG + chr2_2:746554-746573 None:intergenic 75.0%
TCTGGCGGAACCCCGGCGGT+AGG - chr2_2:746554-746573 Msa0229140:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 746200 759552 746200 ID=Msa0229140;Name=Msa0229140
chr2_2 mRNA 746200 759552 746200 ID=Msa0229140-mRNA-1;Parent=Msa0229140;Name=Msa0229140-mRNA-1;_AED=0.08;_eAED=0.08;_QI=110|0.86|0.87|1|0.86|0.93|16|249|859
chr2_2 exon 746200 746613 746200 ID=Msa0229140-mRNA-1:exon:249;Parent=Msa0229140-mRNA-1
chr2_2 exon 747370 747467 747370 ID=Msa0229140-mRNA-1:exon:248;Parent=Msa0229140-mRNA-1
chr2_2 exon 748666 748768 748666 ID=Msa0229140-mRNA-1:exon:247;Parent=Msa0229140-mRNA-1
chr2_2 exon 748960 749089 748960 ID=Msa0229140-mRNA-1:exon:246;Parent=Msa0229140-mRNA-1
chr2_2 exon 749525 749706 749525 ID=Msa0229140-mRNA-1:exon:245;Parent=Msa0229140-mRNA-1
chr2_2 exon 750112 750175 750112 ID=Msa0229140-mRNA-1:exon:244;Parent=Msa0229140-mRNA-1
chr2_2 exon 752206 752279 752206 ID=Msa0229140-mRNA-1:exon:243;Parent=Msa0229140-mRNA-1
chr2_2 exon 752368 752493 752368 ID=Msa0229140-mRNA-1:exon:242;Parent=Msa0229140-mRNA-1
chr2_2 exon 752682 752795 752682 ID=Msa0229140-mRNA-1:exon:241;Parent=Msa0229140-mRNA-1
chr2_2 exon 752877 752966 752877 ID=Msa0229140-mRNA-1:exon:240;Parent=Msa0229140-mRNA-1
chr2_2 exon 755137 755229 755137 ID=Msa0229140-mRNA-1:exon:239;Parent=Msa0229140-mRNA-1
chr2_2 exon 755308 755413 755308 ID=Msa0229140-mRNA-1:exon:238;Parent=Msa0229140-mRNA-1
chr2_2 exon 755567 755706 755567 ID=Msa0229140-mRNA-1:exon:237;Parent=Msa0229140-mRNA-1
chr2_2 exon 756745 757035 756745 ID=Msa0229140-mRNA-1:exon:236;Parent=Msa0229140-mRNA-1
chr2_2 exon 757699 758123 757699 ID=Msa0229140-mRNA-1:exon:235;Parent=Msa0229140-mRNA-1
chr2_2 exon 759064 759552 759064 ID=Msa0229140-mRNA-1:exon:234;Parent=Msa0229140-mRNA-1
chr2_2 five_prime_UTR 759443 759552 759443 ID=Msa0229140-mRNA-1:five_prime_utr;Parent=Msa0229140-mRNA-1
chr2_2 CDS 759064 759442 759064 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 757699 758123 757699 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 756745 757035 756745 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 755567 755706 755567 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 755308 755413 755308 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 755137 755229 755137 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 752877 752966 752877 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 752682 752795 752682 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 752368 752493 752368 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 752206 752279 752206 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 750112 750175 750112 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 749525 749706 749525 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 748960 749089 748960 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 748666 748768 748666 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 747370 747467 747370 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 CDS 746449 746613 746449 ID=Msa0229140-mRNA-1:cds;Parent=Msa0229140-mRNA-1
chr2_2 three_prime_UTR 746200 746448 746200 ID=Msa0229140-mRNA-1:three_prime_utr;Parent=Msa0229140-mRNA-1
Gene Sequence

>Msa0229140

ATGGCAAACGTCTCAGTTGCAGCGGAGTGGCAACTCCTCTACAACCGTTACTACCGTAAACCCGAACTCTATCCAATGCGATGGAAACACGTCGACCTTGCTCGGAACAAAATCGCCGCCGCTCCTTTCGGCGGTCCACTCGCCGTGATCCGCGACGATTCCAAAATCGTCCAGCTTCACGGCGAGTCTGCTCTTCGGAAGCTTCGATTATTCTCCTCCTCCGGTCATCTCCTCGCCGACACCGTCTGGCGGAACCCCGGCGGTAGGTTAATCGGAATGTCGTGGACCGATGATCATACTCTCGTCTGCGTTGTTCAAGATGGAACGGTTTATCGCTATGATGTTCACGCGCGTTTGATTGAACCGAATCTATCGTTAGGTAAAGAGTGTTTTGAAAGCAATGTTGCTGATTGTGCGTTTTGGGGAAATGGCGTCGTTTGTATAACGGAATCGAATCAGTTGTTTTGTATTGCGGATTTTAAAAACCCTAACGCGGTGAAGTTGGCTGATCCGGGGATTGTGGAGCCGCCACGGTGTATGGCGGTTATTGAGCCGCAGTATACGGTGTCTGGGAATGTTGAGGTTTTACTTGGTGTGGGAGATGGTGGTGAGGAGGAGGATGCGGCGGTGATTGCAGTTGAGGAGGACGGTGTGCAGAGGCTTGGTGGTGAGATGCTAAGAGGACCGTTGCAGAAGATGGTGGTGTCACGGGATGGGAAGTGGCTTGCGTCATTTACTCATGATGGCCGGCTTCTTGTTACTACGTCGGATTTGACTGGTGTTATCATCGAGAGGGAGTGCGAGTCAGCTCTTCCTCCAGAGCAGCTTGCTTGGTGTGGAATGGATGCTGTTCTGCTTTACTGGGATGATATGCTTTTAATGATGGGCCCTGATGGAGAACCGGTTACCTACCTTTATGACGAACCAATAATTCTTATTCCTGAGTGCGATGGAGTGAGGATATTGTCCAATGCTAGTATGGAATTTCTGCAACGGGTTCCTGACTCCACAGTTTCAATCTTCACAATTGGCAGTACATCACCCGCAGCTTTGCTGTATGACGCGTTAGATCATTTTGATAGGCGTAGTGCTAAGGCAGATGAAAATTTGAGATTGATAAGATCGTCCCTTCCTGAGGCTGTTGAAGCATGTGTTGATGCTGCAGGTCATGAATTTGATGTTTCGCGCCAACGAACTCTCCTAAGGGCAGCCAGTTATGGGCAGGCCTTTTGTAGCAATTTTCATCGTGATCGTATCCAAGAAATGTGTAAAATTCTGCGGGTCTTGAATGCAGTGCGCAGCTTTGAGATCGGCATTCCTCTTAGTATTCAGCAATATAAGTTGCTTACACCATCTGTCCTGATTGGTCGCCTGATAAATGCTCACCAACATCTGCTTGCATTGCGGATATCCGAATATCTCGGAATGAATCAAGAGGTGGTGATAATGCACTGGGCATGTGCTAAGATAACTGCGTCATTGGCAATACCCGATGCTACTCTTCTAGAGATTCTGCTTGATAAGTTAAAAGTGTGCAAAGGCATATCCTATGCAGCAGTTGCTGCTCATGCAGACAAAAATGGCCGCCGAAAGTTAGCTGCCTTGCTTGTTGAACACGAACCCCGTTCATCTAAACAGGTTCCTCTCCTGTTAAGCATAGGAGAAGAAGATACAGCCTTGATGAAGGCGACTGAATGTGGTGATACAGACCTTGTTTACCTTGTACTTTTTCATATTTGGCAAAAGGTATTGGATTCTGGAAAGAGGCAACCGTTGGAGTTCTTTGGAACCATACAGGCCAGACAATTAGCACGGGACTTATTTATAACTTATGCACGGTGCTATAAACATGAATTTTTGAAGGACTTCTTCTTATCAACAGGGCAACTTCAAGTATGTTCTGATGTGGCATTTCTTCTTTGGAAAGAATCATGGGAACTTGAAAAAAATCCCATGGCAAGCAAGGGATCTCCACTTCATGGTCCTCGAATAAAACTTATTGAGAAGGCCCAAAATCTTTTTGCAGAAACCAAGGAACATACCTTTGAATCAAAGGCAGCTGAGGAGCATGCAAAACTTTTAAGACTCCAGCATGAACTTGAAGTGACCACAAAGCAGGCCATTTTTGTGGATTCAAGTATAAGTGACACAATCCGGACTTGTATTGTCCTGGGAAATCATCGAGCTGCGTTAAAAGTGAAAACAGAATTTAAGGTGTCGGAGAAGAGATGGTATTGGCTTAAGGTTTTTGCTCTGGCCACAATCAAGGACTGGGCTGCCCTAGAAAAATTTTCGAAGGAGAAGAAACCTCCAATAGGTTATAGGCCATTTGTCGAGGCATGCATTGAAGCAGATGAAAAGGGAGAAGCTATTAAATATATACCCAAACTTGCAGACCCTCGAGAAAAAGCTGAGTCGTATGCTCGAATTGGTATGGCCAAGGAAGCTGCGGATGCTGCTGCACAGTCAAAAGACGGTGAGTTGCTTGGTCGGTTGAAATTGACATTCGCACAAAATGCAGCAGCTTCATCATTATTTGATACTCTTCGAGATCGATTGTCTTTTCAAGGTGCTTCATGA
Protein sequence

>Msa0229140

MANVSVAAEWQLLYNRYYRKPELYPMRWKHVDLARNKIAAAPFGGPLAVIRDDSKIVQLHGESALRKLRLFSSSGHLLADTVWRNPGGRLIGMSWTDDHTLVCVVQDGTVYRYDVHARLIEPNLSLGKECFESNVADCAFWGNGVVCITESNQLFCIADFKNPNAVKLADPGIVEPPRCMAVIEPQYTVSGNVEVLLGVGDGGEEEDAAVIAVEEDGVQRLGGEMLRGPLQKMVVSRDGKWLASFTHDGRLLVTTSDLTGVIIERECESALPPEQLAWCGMDAVLLYWDDMLLMMGPDGEPVTYLYDEPIILIPECDGVRILSNASMEFLQRVPDSTVSIFTIGSTSPAALLYDALDHFDRRSAKADENLRLIRSSLPEAVEACVDAAGHEFDVSRQRTLLRAASYGQAFCSNFHRDRIQEMCKILRVLNAVRSFEIGIPLSIQQYKLLTPSVLIGRLINAHQHLLALRISEYLGMNQEVVIMHWACAKITASLAIPDATLLEILLDKLKVCKGISYAAVAAHADKNGRRKLAALLVEHEPRSSKQVPLLLSIGEEDTALMKATECGDTDLVYLVLFHIWQKVLDSGKRQPLEFFGTIQARQLARDLFITYARCYKHEFLKDFFLSTGQLQVCSDVAFLLWKESWELEKNPMASKGSPLHGPRIKLIEKAQNLFAETKEHTFESKAAEEHAKLLRLQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAALKVKTEFKVSEKRWYWLKVFALATIKDWAALEKFSKEKKPPIGYRPFVEACIEADEKGEAIKYIPKLADPREKAESYARIGMAKEAADAAAQSKDGELLGRLKLTFAQNAAASSLFDTLRDRLSFQGAS*