AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0532100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0532100 MtrunA17_Chr8g0380271 97.921 866 14 3 1 863 1 865 0.0 1710
Msa0532100 MtrunA17_Chr3g0096441 25.913 876 498 31 18 863 23 777 1.33e-31 132
Msa0532100 MtrunA17_Chr8g0343521 40.323 124 61 3 4 127 6 116 7.45e-17 85.9
Msa0532100 MtrunA17_Chr5g0429151 50.685 73 33 1 18 87 10 82 1.45e-16 84.7
Msa0532100 MtrunA17_Chr5g0446841 39.394 99 58 2 18 114 16 114 2.17e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0532100 AT1G29350.1 45.783 913 360 40 2 863 3 831 0.0 571
Msa0532100 AT1G29370.1 45.524 916 358 40 2 863 3 831 0.0 570
Msa0532100 AT1G29370.2 43.775 747 301 33 161 863 20 691 1.11e-149 457
Msa0532100 AT4G18150.1 36.071 901 381 40 6 856 3 758 4.79e-110 355
Msa0532100 AT5G46380.1 50.000 96 42 3 15 105 8 102 1.17e-17 88.2
Msa0532100 AT5G46380.2 50.000 96 42 3 15 105 63 157 1.22e-17 88.2
Msa0532100 AT3G13990.1 47.500 80 42 0 5 84 2 81 6.46e-16 83.2
Msa0532100 AT3G13990.2 47.500 80 42 0 5 84 2 81 6.74e-16 82.8
Msa0532100 AT3G07660.1 54.286 70 28 2 18 83 10 79 2.32e-15 81.3

Find 300 sgRNAs with CRISPR-Local

Find 553 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACAAAATGCCACTGTTTC+TGG 0.131454 4_1:+6122201 Msa0532100:CDS
TGAGAATGGTAGAAATTATT+AGG 0.188167 4_1:-6126013 None:intergenic
TTGTCAAGATGCAGGCTTTA+AGG 0.189462 4_1:+6125078 Msa0532100:intron
TGCAGAAATCCCGACTATTA+TGG 0.197232 4_1:+6122397 Msa0532100:intron
TTTGTATAATACTCAGAATT+TGG 0.210938 4_1:-6121289 None:intergenic
AGTCTGAGCTTTGGAAGTTT+TGG 0.226818 4_1:+6122174 Msa0532100:CDS
ACTGCTTAGGTGGTTGGCTT+TGG 0.229453 4_1:-6126096 None:intergenic
CTGCTTAGGTGGTTGGCTTT+GGG 0.240326 4_1:-6126095 None:intergenic
GCAGGCATTGCTTGTGTAAC+AGG 0.247275 4_1:-6123701 None:intergenic
TATGATTGTTATCCTTATAC+TGG 0.256360 4_1:-6125508 None:intergenic
CCAGGCAAAGATTGTTGATT+AGG 0.276204 4_1:-6125131 None:intergenic
ATATTCCTTTCAGCTGAAAA+TGG 0.278424 4_1:+6122021 Msa0532100:intron
GATAATCCAGGAACTGCTTC+TGG 0.289516 4_1:+6121448 Msa0532100:CDS
GGAAGTTCCACCAGCATTCC+TGG 0.294224 4_1:+6125413 Msa0532100:CDS
ATACCATCTGGATATGGTTT+TGG 0.299580 4_1:+6125392 Msa0532100:CDS
GTAACAGGGAAGGGTGAGTA+TGG 0.301650 4_1:-6123686 None:intergenic
ACATACCATTATTACTGAAT+TGG 0.309599 4_1:-6120018 None:intergenic
CACTCCGATCCCCTCGAGTT+AGG 0.309796 4_1:-6119442 None:intergenic
GCTACTGATGTTTCAGCAAT+TGG 0.311438 4_1:+6122279 Msa0532100:CDS
CTCCTCCAAGTTACTTTGTA+AGG 0.312134 4_1:-6122247 None:intergenic
TAATGATGACCAAGAATAAA+AGG 0.321808 4_1:-6126455 None:intergenic
AATGCTGCTGCGATGGCTGC+TGG 0.323633 4_1:-6125973 None:intergenic
CCTGGTGCTGGTGTTGCCAC+TGG 0.327217 4_1:+6125149 Msa0532100:CDS
CCCGTGTTTAAGAAAGAAAA+TGG 0.342626 4_1:+6120316 Msa0532100:CDS
CGTGATAAACTCCCAGTATA+AGG 0.343410 4_1:+6125496 Msa0532100:CDS
CCTAGGGATGCTTCCCTTGC+CGG 0.343729 4_1:+6126070 Msa0532100:CDS
GCAGAAATCCCGACTATTAT+GGG 0.344135 4_1:+6122398 Msa0532100:intron
GACTAAAACACTCTGGAGTA+TGG 0.347028 4_1:-6122155 None:intergenic
TCATCACTCTGTTGAACATT+GGG 0.349769 4_1:-6121220 None:intergenic
AGTAACTTGGAGGAGACTTC+TGG 0.354552 4_1:+6122255 Msa0532100:CDS
GAAAATGGAACGCCTGCTTA+TGG 0.359441 4_1:+6120331 Msa0532100:CDS
TGAACATTGGGTTCAATAGA+AGG 0.361624 4_1:-6121169 None:intergenic
TCGAACCAATTCAGTAATAA+TGG 0.363650 4_1:+6120013 Msa0532100:CDS
GTATGGAGTTGTAGGTGATT+TGG 0.365100 4_1:-6122138 None:intergenic
TGTCAAGATGCAGGCTTTAA+GGG 0.371015 4_1:+6125079 Msa0532100:intron
CCACTGTGGACAGAAGATTT+AGG 0.371116 4_1:-6121070 None:intergenic
AGCAACATGGCTTCTTCAAT+TGG 0.373493 4_1:+6123731 Msa0532100:CDS
TCATCACTCTGTTGAACATT+GGG 0.374072 4_1:-6121181 None:intergenic
TCATATCCAGAAGCAGTTCC+TGG 0.381408 4_1:-6121454 None:intergenic
AGGTGGTTGGCTTTGGGAGC+CGG 0.383810 4_1:-6126089 None:intergenic
GTGGCATAGATCTCGTTATC+AGG 0.387328 4_1:-6119576 None:intergenic
TATCCAATGGTTGTACTAGT+AGG 0.392226 4_1:-6125467 None:intergenic
ATGTTAAATGTACCATTGTT+TGG 0.394612 4_1:+6126238 Msa0532100:three_prime_UTR
TTCTTTGCCCAATGCTCTGT+TGG 0.399402 4_1:+6123631 Msa0532100:CDS
ACCGGCGGCGAGTCGGAAAA+TGG 0.402820 4_1:+6119521 Msa0532100:CDS
GGCAATATATCCCACATAAC+TGG 0.405437 4_1:+6122448 Msa0532100:CDS
TAAACACGGGTTTACTCTGC+TGG 0.406086 4_1:-6120303 None:intergenic
GTTGGGACTGCTTAGGTGGT+TGG 0.411643 4_1:-6126102 None:intergenic
TAAAGCCTCTGGTTGTGAAA+TGG 0.415654 4_1:-6122500 None:intergenic
AAAGAGTATTGTTGTAATAC+AGG 0.416464 4_1:-6126366 None:intergenic
GAATGAGGATATGCAACTTC+TGG 0.418587 4_1:-6122610 None:intergenic
ATATGCAACTTCTGGTTGTT+GGG 0.418891 4_1:-6122602 None:intergenic
ATATAACATAGCTATCAAAA+AGG 0.420805 4_1:+6119173 Msa0532100:five_prime_UTR
TGGAGAAGGGAGATAGGTTC+TGG 0.424665 4_1:-6122651 None:intergenic
GGTTCAGACTTTAAAGCCTC+TGG 0.425019 4_1:-6122511 None:intergenic
CAATGCTCTGTTGGCTTCAA+CGG 0.425294 4_1:+6123640 Msa0532100:CDS
ATCATCGTTGTCGGGTATAC+CGG 0.425443 4_1:+6119503 Msa0532100:CDS
GTTGGCTTTGGGAGCCGGCA+AGG 0.425841 4_1:-6126084 None:intergenic
TCCGTGTTCTGTCTCATATA+TGG 0.427991 4_1:+6126430 Msa0532100:three_prime_UTR
GCTGCTATACCATCTGGATA+TGG 0.428437 4_1:+6125386 Msa0532100:CDS
TGTGCATCCGTACTCACAGC+TGG 0.430757 4_1:+6125196 Msa0532100:CDS
GTTGTTGTTGATTCTGTCCC+TGG 0.432205 4_1:-6125928 None:intergenic
AGACGACTAACAGCTTCGTT+AGG 0.434553 4_1:-6119621 None:intergenic
TGGTCCGAAGAGACCCAATA+TGG 0.434603 4_1:+6126258 Msa0532100:three_prime_UTR
ACTCTGGAGTATGGAGTTGT+AGG 0.436906 4_1:-6122146 None:intergenic
CGATATGCTGGCCGGGGTGG+CGG 0.437149 4_1:+6119980 Msa0532100:CDS
CCGAGTCGCGGCGGCGGTGG+TGG 0.440407 4_1:+6119941 Msa0532100:CDS
CCGGCCATATTGGGTCTCTT+CGG 0.441041 4_1:-6126262 None:intergenic
TATAATACTCAGAATTTGGA+TGG 0.442532 4_1:-6121285 None:intergenic
ACTCCGATCCCCTCGAGTTA+GGG 0.444567 4_1:-6119441 None:intergenic
GAAGCAGATCCAACATCAAC+AGG 0.444671 4_1:-6121400 None:intergenic
TCACCTTCGTTGTCATCAAA+AGG 0.445731 4_1:-6121523 None:intergenic
CAGTCTGCTGCTATACCATC+TGG 0.448979 4_1:+6125380 Msa0532100:CDS
TGATGGACAATAATGTAAAC+AGG 0.450601 4_1:+6120383 Msa0532100:CDS
CTGGAAGCTGTAATACGTGC+TGG 0.453247 4_1:-6125909 None:intergenic
TGAACATTGGGGTCAATAGA+AGG 0.454561 4_1:-6121208 None:intergenic
GAGAATGGTAGAAATTATTA+GGG 0.455029 4_1:-6126012 None:intergenic
AACAATCCTATGTGGGTTCA+AGG 0.455407 4_1:+6125857 Msa0532100:CDS
ATTATATCTGATGATAATCC+AGG 0.457309 4_1:+6121436 Msa0532100:CDS
ATACCGAGTCGCGGCGGCGG+TGG 0.457632 4_1:+6119938 Msa0532100:CDS
ATCCAATGGTTGTACTAGTA+GGG 0.460599 4_1:-6125466 None:intergenic
CTACTGATGTTTCAGCAATT+GGG 0.460752 4_1:+6122280 Msa0532100:CDS
TTGGCTTTGGGAGCCGGCAA+GGG 0.466160 4_1:-6126083 None:intergenic
AATTGTTGTTGGGACTGCTT+AGG 0.468035 4_1:-6126109 None:intergenic
AACATGGCTTCTTCAATTGG+TGG 0.468306 4_1:+6123734 Msa0532100:CDS
GTCGCGGCGGCGGTGGTGGT+AGG 0.468646 4_1:+6119945 Msa0532100:CDS
CGCCACCCCGGCCAGCATAT+CGG 0.469813 4_1:-6119979 None:intergenic
GTGAGGATGAGCGGCAAAGT+AGG 0.469994 4_1:+6119462 Msa0532100:exon
GGCGGCGGTGGTGGTAGGAC+TGG 0.471364 4_1:+6119950 Msa0532100:CDS
TTCATCACTCTGTTGAACAT+TGG 0.471449 4_1:-6121182 None:intergenic
TTATACAAATACATCTAACT+TGG 0.471805 4_1:+6121303 Msa0532100:CDS
TTGCTCTTAACCTCATGAAA+AGG 0.472617 4_1:-6119751 None:intergenic
TCATATGATTTCACTTCAGC+AGG 0.476681 4_1:+6125526 Msa0532100:CDS
CATGCCATCGGCATTTCAGC+AGG 0.476730 4_1:+6125271 Msa0532100:CDS
CAGCACGTATTACAGCTTCC+AGG 0.479728 4_1:+6125910 Msa0532100:CDS
CAACAATCTTTGCCTGGTGC+TGG 0.482125 4_1:+6125137 Msa0532100:CDS
TTCATCACTCTGTTGAACAT+TGG 0.484635 4_1:-6121221 None:intergenic
GTTAGTCGTCTTCTTTCTCA+AGG 0.485543 4_1:+6119633 Msa0532100:CDS
TGAGGATGAGCGGCAAAGTA+GGG 0.485905 4_1:+6119463 Msa0532100:exon
CAAAAGGATGTCGATGAGAC+TGG 0.486306 4_1:-6121507 None:intergenic
GAAGCACCGCTGCCAGAGAT+TGG 0.486453 4_1:-6125319 None:intergenic
TTACACTGGAGAAGGGAGAT+AGG 0.487511 4_1:-6122657 None:intergenic
ACATCAGAATTGTCCTCCTC+TGG 0.487648 4_1:-6122108 None:intergenic
AGATTTAGGCACGGATGCCT+TGG 0.488437 4_1:-6121056 None:intergenic
GTTGAAGCCAACAGAGCATT+GGG 0.490742 4_1:-6123638 None:intergenic
TACGCTCGTGATGTTAACTT+AGG 0.490743 4_1:+6126323 Msa0532100:three_prime_UTR
CCTATGTGGGTTCAAGGGCC+TGG 0.491914 4_1:+6125863 Msa0532100:CDS
CCACCACCGCCGCCGCGACT+CGG 0.494335 4_1:-6119941 None:intergenic
CGTTGAAGCCAACAGAGCAT+TGG 0.495525 4_1:-6123639 None:intergenic
GTAGTGACCGATATGCTGGC+CGG 0.495955 4_1:+6119972 Msa0532100:CDS
GATATGCAACTTCTGGTTGT+TGG 0.498257 4_1:-6122603 None:intergenic
GAGCCCAGGTCAAGTGTCAA+TGG 0.500187 4_1:+6121003 Msa0532100:CDS
TAGCACCTACCACCAATCTC+TGG 0.500268 4_1:+6125307 Msa0532100:CDS
ACATAACTGGTGTGGATGCT+AGG 0.500709 4_1:+6122461 Msa0532100:CDS
TCAGCCATTGACACTTGACC+TGG 0.501383 4_1:-6121007 None:intergenic
TGCTCATCCCCATAATAGTC+GGG 0.501814 4_1:-6122406 None:intergenic
AGGTACATCATCATCGTTGT+CGG 0.502101 4_1:+6119494 Msa0532100:CDS
TCTGCATGGTCGGCGAGCCC+AGG 0.502549 4_1:+6120989 Msa0532100:CDS
TAGCATCCACACCAGTTATG+TGG 0.502709 4_1:-6122459 None:intergenic
GGCACGGATGCCTTGGCCTG+TGG 0.503151 4_1:-6121049 None:intergenic
AATGCCACTGTTTCTGGAGC+CGG 0.504252 4_1:+6122207 Msa0532100:CDS
TAACTTATCATATTAGCAAA+AGG 0.504719 4_1:-6125221 None:intergenic
TAGGCCCTTACAAAGTAACT+TGG 0.504725 4_1:+6122242 Msa0532100:CDS
CCGGCAAGGGAAGCATCCCT+AGG 0.505021 4_1:-6126070 None:intergenic
TAAACAGGCAGCCACCATCT+TGG 0.509603 4_1:+6120398 Msa0532100:CDS
AAGTTGTGATGCGAGGCTGC+TGG 0.511504 4_1:-6121118 None:intergenic
TGAACCCTCTGAAACTGCTC+AGG 0.513104 4_1:+6122528 Msa0532100:CDS
TTCTGTTGCAGTGATTCTGT+TGG 0.513872 4_1:+6120920 Msa0532100:intron
TGTGAGCTTGCTTGTGAATG+AGG 0.515023 4_1:-6122625 None:intergenic
GTGGAGGAGCCTCCATAAGC+AGG 0.516664 4_1:-6120343 None:intergenic
GGTGCAAAATGCTGCTGCGA+TGG 0.517018 4_1:-6125980 None:intergenic
TGGGAACGCCTCGTATTGAT+TGG 0.517342 4_1:-6126208 None:intergenic
GATGGGTAGGCCACAGGCCA+AGG 0.517499 4_1:+6121039 Msa0532100:CDS
ACTGACATTGTTCGAGAACC+AGG 0.517878 4_1:-6125881 None:intergenic
ATAGTTTCCACCAGGAATGC+TGG 0.518703 4_1:-6125423 None:intergenic
GAGAAATCCCACTCTGAGAA+TGG 0.519187 4_1:-6126027 None:intergenic
ATCTCCCTTCTCCAGTGTAA+TGG 0.521345 4_1:+6122660 Msa0532100:CDS
TTACTGAAGCAAATAATGAA+TGG 0.524202 4_1:+6121146 Msa0532100:CDS
GACGACTAACAGCTTCGTTA+GGG 0.524337 4_1:-6119620 None:intergenic
ATGCCACTGTTTCTGGAGCC+GGG 0.524558 4_1:+6122208 Msa0532100:CDS
GAGCCGGGACACATTCATCT+AGG 0.527788 4_1:+6122223 Msa0532100:CDS
TAGTGACCGATATGCTGGCC+GGG 0.529165 4_1:+6119973 Msa0532100:CDS
CATTACCATTACACTGGAGA+AGG 0.529209 4_1:-6122665 None:intergenic
GCCCTTACAAAGTAACTTGG+AGG 0.530352 4_1:+6122245 Msa0532100:CDS
ACTGGTAGTGACCGATATGC+TGG 0.533784 4_1:+6119968 Msa0532100:CDS
ATTTCTACCATTCTCAGAGT+GGG 0.534749 4_1:+6126020 Msa0532100:CDS
TCGGTGAACTTAACTTGTGT+CGG 0.536722 4_1:+6119024 None:intergenic
CGGGTATACCGGCGGCGAGT+CGG 0.537690 4_1:+6119514 Msa0532100:CDS
TAATTACTCCCACGTGACCT+TGG 0.540089 4_1:-6119911 None:intergenic
AACATCAGCAGCAGAACCCT+AGG 0.541212 4_1:+6126053 Msa0532100:CDS
GGTACATCATCATCGTTGTC+GGG 0.541357 4_1:+6119495 Msa0532100:CDS
CCAGTGGCAACACCAGCACC+AGG 0.542760 4_1:-6125149 None:intergenic
GTAAACTCATGCGAAGATGA+AGG 0.543874 4_1:-6122568 None:intergenic
TCCTCCAAGTTACTTTGTAA+GGG 0.545463 4_1:-6122246 None:intergenic
ATGCTCATCCCCATAATAGT+CGG 0.545903 4_1:-6122407 None:intergenic
AAAGGTCCCAGCTGTGAGTA+CGG 0.546189 4_1:-6125203 None:intergenic
TGGCTTTGTCGAAATGCACC+TGG 0.547698 4_1:-6125953 None:intergenic
CAGCTACAAATTCATTTCCG+TGG 0.549215 4_1:-6121351 None:intergenic
CCTAATCAACAATCTTTGCC+TGG 0.549819 4_1:+6125131 Msa0532100:CDS
TGTCAAGATGGGTAGGCCAC+AGG 0.551390 4_1:+6121033 Msa0532100:CDS
TTCTTCCATTTCACAACCAG+AGG 0.555873 4_1:+6122495 Msa0532100:CDS
TACTAATCCTAATCACCTCC+CGG 0.559374 4_1:+6126145 Msa0532100:exon
AGTGACCGATATGCTGGCCG+GGG 0.562948 4_1:+6119974 Msa0532100:CDS
AACCACATACTTGGCATCTG+AGG 0.563576 4_1:-6122304 None:intergenic
AAAGATAAATACCTCCAAGA+TGG 0.563649 4_1:-6120412 None:intergenic
GTCTTATGCATCTAGTGTGA+TGG 0.563807 4_1:+6120366 Msa0532100:CDS
GAACCCTAACTCGAGGGGAT+CGG 0.565653 4_1:+6119438 Msa0532100:five_prime_UTR
CATTGCTTGTGTAACAGGGA+AGG 0.569151 4_1:-6123696 None:intergenic
ACAGGCAGCCACCATCTTGG+AGG 0.569197 4_1:+6120401 Msa0532100:CDS
TGTTGTTGGGACTGCTTAGG+TGG 0.569521 4_1:-6126106 None:intergenic
TGTTGATTAGGTTGAGCTTG+AGG 0.571227 4_1:-6125119 None:intergenic
TGGAAGCTGTAATACGTGCT+GGG 0.572788 4_1:-6125908 None:intergenic
GAGTATGGGATATCCTCCCT+TGG 0.575189 4_1:-6123671 None:intergenic
GTAGAGATAAGTATTGTGAT+CGG 0.576105 4_1:+6119406 Msa0532100:five_prime_UTR
AATATACCGAGTCGCGGCGG+CGG 0.576843 4_1:+6119935 Msa0532100:CDS
ATAAATAAAGAGATAAACAC+TGG 0.577224 4_1:+6119138 Msa0532100:five_prime_UTR
AATGGCTGACATTGTCAAGA+TGG 0.577715 4_1:+6121021 Msa0532100:CDS
CTACCACCAATCTCTGGCAG+CGG 0.578357 4_1:+6125313 Msa0532100:CDS
AGCACGTATTACAGCTTCCA+GGG 0.578501 4_1:+6125911 Msa0532100:CDS
CCGAAGAGACCCAATATGGC+CGG 0.579027 4_1:+6126262 Msa0532100:three_prime_UTR
ATGTTCAACAGAGTGATGAA+TGG 0.579550 4_1:+6121185 Msa0532100:CDS
ATGTTCAACAGAGTGATGAA+TGG 0.579550 4_1:+6121224 Msa0532100:CDS
GTATAGCTCTGAGGCATGAA+CGG 0.580543 4_1:-6125245 None:intergenic
GGGCCTAGATGAATGTGTCC+CGG 0.582233 4_1:-6122226 None:intergenic
CAGGCATTGCTTGTGTAACA+GGG 0.583522 4_1:-6123700 None:intergenic
GTACTAGTAGGGGCAGCTGA+TGG 0.583533 4_1:-6125455 None:intergenic
ATGATTGTTATCCTTATACT+GGG 0.584516 4_1:-6125507 None:intergenic
CCAGGCCCTTGAACCCACAT+AGG 0.584672 4_1:-6125863 None:intergenic
GATGAGAATCCTGTTGATGT+TGG 0.584695 4_1:+6121391 Msa0532100:CDS
GCCCCTACTAGTACAACCAT+TGG 0.585988 4_1:+6125464 Msa0532100:CDS
AGCATCCACACCAGTTATGT+GGG 0.586141 4_1:-6122458 None:intergenic
GGGGCAGCTGATGGATTCAA+AGG 0.586575 4_1:-6125446 None:intergenic
ATGGCTGACATTGTCAAGAT+GGG 0.587015 4_1:+6121022 Msa0532100:CDS
CTGTCTTCATCATCACATCA+TGG 0.587021 4_1:+6120956 Msa0532100:CDS
TACATTTAACATTAGACCGT+GGG 0.587062 4_1:-6126227 None:intergenic
AGAGATAGAAAACACGAAGA+GGG 0.588714 4_1:+6119308 Msa0532100:five_prime_UTR
GACCGATATGCTGGCCGGGG+TGG 0.588824 4_1:+6119977 Msa0532100:CDS
ACAATCCTATGTGGGTTCAA+GGG 0.590132 4_1:+6125858 Msa0532100:CDS
TATCACGTCATCATATCCAA+TGG 0.592769 4_1:-6125480 None:intergenic
CATGTTACAGTCTTTGAGAG+TGG 0.592942 4_1:-6119595 None:intergenic
TAACAGGGAAGGGTGAGTAT+GGG 0.593054 4_1:-6123685 None:intergenic
GGATGCACAGCAAGGTGTTG+AGG 0.593434 4_1:-6125182 None:intergenic
GATAAATACCTCCAAGATGG+TGG 0.593978 4_1:-6120409 None:intergenic
TATACAAATACATCTAACTT+GGG 0.595181 4_1:+6121304 Msa0532100:CDS
CATATTGCTACTACCTCAGA+TGG 0.595267 4_1:+6122427 Msa0532100:CDS
ATTGCTTGTGTAACAGGGAA+GGG 0.596414 4_1:-6123695 None:intergenic
GTGCATCCGTACTCACAGCT+GGG 0.596507 4_1:+6125197 Msa0532100:CDS
TGCGGCTGAACCCTAACTCG+AGG 0.598394 4_1:+6119431 Msa0532100:five_prime_UTR
AGAATGAGAACAATCCTATG+TGG 0.598777 4_1:+6125849 Msa0532100:intron
ATCAATACGAGGCGTTCCCA+CGG 0.599819 4_1:+6126211 Msa0532100:three_prime_UTR
CATCAACAACAACTGTTGGT+GGG 0.601667 4_1:-6121261 None:intergenic
AAGCTCAGACTAAAACACTC+TGG 0.601824 4_1:-6122162 None:intergenic
AACTCGAGGGGATCGGAGTG+AGG 0.602777 4_1:+6119445 Msa0532100:five_prime_UTR
CTAAATCTTCTGTCCACAGT+GGG 0.603435 4_1:+6121071 Msa0532100:CDS
GTTGGTGGGTGCTCAACAGA+AGG 0.604734 4_1:-6121247 None:intergenic
TTCAAAGGATAGTTTCCACC+AGG 0.605161 4_1:-6125431 None:intergenic
AATGGAACGCCTGCTTATGG+AGG 0.606529 4_1:+6120334 Msa0532100:CDS
GCAAGGTGTTGAGGAAGTGA+AGG 0.606894 4_1:-6125173 None:intergenic
CCTAAATCTTCTGTCCACAG+TGG 0.609597 4_1:+6121070 Msa0532100:CDS
AACTTGCATCACCGCCACCC+CGG 0.609703 4_1:-6119991 None:intergenic
ATAATACTCAGAATTTGGAT+GGG 0.610849 4_1:-6121284 None:intergenic
ACAACAGAACCAAGGTCACG+TGG 0.611217 4_1:+6119902 Msa0532100:CDS
TATATCCCACATAACTGGTG+TGG 0.611883 4_1:+6122453 Msa0532100:CDS
GAGCTATACCTACATGCCAT+CGG 0.612525 4_1:+6125259 Msa0532100:CDS
GCACCGCTGCCAGAGATTGG+TGG 0.613306 4_1:-6125316 None:intergenic
GAGAGATAGAAAACACGAAG+AGG 0.613579 4_1:+6119307 Msa0532100:five_prime_UTR
ATATGATGATAATTTGTACA+AGG 0.614124 4_1:+6121471 Msa0532100:CDS
AGCAGTCCCAACAACAATTG+TGG 0.614795 4_1:+6126113 Msa0532100:CDS
CGGCAAGGGAAGCATCCCTA+GGG 0.614858 4_1:-6126069 None:intergenic
AATTTACACACAGATGAGCA+AGG 0.615714 4_1:+6122078 Msa0532100:CDS
CCAATGCATTACCATTACAC+TGG 0.615927 4_1:-6122671 None:intergenic
TGAGCAAGGGACAGAACCAG+AGG 0.616906 4_1:+6122092 Msa0532100:CDS
CTTCCAAAACCATATCCAGA+TGG 0.617034 4_1:-6125395 None:intergenic
CTGACATTGTCAAGATGGGT+AGG 0.617049 4_1:+6121026 Msa0532100:CDS
GAATACAACTACTGTCACAT+GGG 0.617527 4_1:-6126289 None:intergenic
TCCAATGGTTGTACTAGTAG+GGG 0.620354 4_1:-6125465 None:intergenic
GCATCAACAACAACTGTTGG+TGG 0.620968 4_1:-6121262 None:intergenic
AACATTCAAGTTGTGATGCG+AGG 0.621627 4_1:-6121125 None:intergenic
CAGCCATTGACACTTGACCT+GGG 0.622423 4_1:-6121006 None:intergenic
TGGGCATCAACAACAACTGT+TGG 0.624347 4_1:-6121265 None:intergenic
TTGAGGAAGTGAAGGTCCAG+TGG 0.626322 4_1:-6125165 None:intergenic
GAGGATGAGCGGCAAAGTAG+GGG 0.626473 4_1:+6119464 Msa0532100:exon
GAATGAGAACAATCCTATGT+GGG 0.626818 4_1:+6125850 Msa0532100:intron
GCGGCTGAACCCTAACTCGA+GGG 0.627579 4_1:+6119432 Msa0532100:five_prime_UTR
AGAATACAACTACTGTCACA+TGG 0.628248 4_1:-6126290 None:intergenic
CACACTAGATGCATAAGACG+TGG 0.629917 4_1:-6120362 None:intergenic
TGGATTGCAATCTGCATGGT+CGG 0.630287 4_1:+6120979 Msa0532100:CDS
AAAGCCTGCTGAAATGCCGA+TGG 0.631956 4_1:-6125275 None:intergenic
CGCTGCCAGAGATTGGTGGT+AGG 0.632641 4_1:-6125312 None:intergenic
TACCTCTGACATGTTTATCG+TGG 0.632657 4_1:-6123759 None:intergenic
GTGGGATATATTGCCATCTG+AGG 0.632746 4_1:-6122440 None:intergenic
AATTTCTACCATTCTCAGAG+TGG 0.633896 4_1:+6126019 Msa0532100:CDS
GATTCTGTTGGTGTCCATGA+CGG 0.634224 4_1:+6120932 Msa0532100:CDS
CTGAAATGCCGATGGCATGT+AGG 0.634576 4_1:-6125267 None:intergenic
GGGATCGGAGTGAGGATGAG+CGG 0.634913 4_1:+6119453 Msa0532100:exon
AGCTGAAGACAGTTCTGTTG+AGG 0.637818 4_1:+6121369 Msa0532100:CDS
AGGATGAGCGGCAAAGTAGG+GGG 0.638263 4_1:+6119465 Msa0532100:exon
TGAAAATGGTGTTTCATCAG+TGG 0.638285 4_1:+6122035 Msa0532100:CDS
AACGGTTCAAACACCAAGGG+AGG 0.641331 4_1:+6123658 Msa0532100:CDS
GCAAGGGACAGAACCAGAGG+AGG 0.642696 4_1:+6122095 Msa0532100:CDS
ATGATGAAGACAGTCCGTCA+TGG 0.643081 4_1:-6120946 None:intergenic
GATGGTATAGCAGCAGACTG+AGG 0.645781 4_1:-6125377 None:intergenic
CAGAATCAACAACAACAACC+AGG 0.645981 4_1:+6125935 Msa0532100:CDS
ACATCAGCAGCAGAACCCTA+GGG 0.646794 4_1:+6126054 Msa0532100:CDS
CAGAAATCCCGACTATTATG+GGG 0.649539 4_1:+6122399 Msa0532100:intron
ATTTACACACAGATGAGCAA+GGG 0.649851 4_1:+6122079 Msa0532100:CDS
ATCGTTGTCGGGTATACCGG+CGG 0.650301 4_1:+6119506 Msa0532100:CDS
GGTCTCTTCGGACCAAACAA+TGG 0.653982 4_1:-6126250 None:intergenic
GTGAGTACGGATGCACAGCA+AGG 0.655238 4_1:-6125190 None:intergenic
CACTCTCAAAGACTGTAACA+TGG 0.656952 4_1:+6119596 Msa0532100:CDS
GTTTCCACCAGGAATGCTGG+TGG 0.657460 4_1:-6125420 None:intergenic
ATTACCATTACACTGGAGAA+GGG 0.657757 4_1:-6122664 None:intergenic
CGGCTGAACCCTAACTCGAG+GGG 0.659200 4_1:+6119433 Msa0532100:five_prime_UTR
CTTCAACGGTTCAAACACCA+AGG 0.659295 4_1:+6123654 Msa0532100:CDS
AATACAACTACTGTCACATG+GGG 0.662553 4_1:-6126288 None:intergenic
CATCACTCTGTTGAACATTG+GGG 0.665234 4_1:-6121219 None:intergenic
TATAATATACCGAGTCGCGG+CGG 0.665825 4_1:+6119932 Msa0532100:CDS
AATAGACAACTGCAGAACCA+CGG 0.668240 4_1:+6121334 Msa0532100:CDS
GTACATTTAACATTAGACCG+TGG 0.669271 4_1:-6126228 None:intergenic
GCCTGCAAAATATAGCAACA+TGG 0.677043 4_1:+6123718 Msa0532100:CDS
TGTTAATAACATACGGACGA+TGG 0.678696 4_1:-6126512 None:intergenic
TAAGTATTGTGATCGGAGTG+CGG 0.680201 4_1:+6119413 Msa0532100:five_prime_UTR
CATTCTGATGATTCCCACTG+TGG 0.681276 4_1:-6121084 None:intergenic
GCCATATATGAGACAGAACA+CGG 0.681877 4_1:-6126431 None:intergenic
TTCCACGATAAACATGTCAG+AGG 0.686512 4_1:+6123757 Msa0532100:CDS
AGTTCCACCAGCATTCCTGG+TGG 0.687385 4_1:+6125416 Msa0532100:CDS
AATTATAATATACCGAGTCG+CGG 0.693817 4_1:+6119929 Msa0532100:CDS
GTGGACAGAAGATTTAGGCA+CGG 0.697837 4_1:-6121065 None:intergenic
TTCAACGGTTCAAACACCAA+GGG 0.698105 4_1:+6123655 Msa0532100:CDS
ATGGTGGATTGCAATCTGCA+TGG 0.698767 4_1:+6120975 Msa0532100:CDS
TGTCCCGGCTCCAGAAACAG+TGG 0.704706 4_1:-6122211 None:intergenic
TCTTCATCATCACATCATGG+TGG 0.706000 4_1:+6120959 Msa0532100:CDS
ACTAGATGCATAAGACGTGG+AGG 0.713779 4_1:-6120359 None:intergenic
GGCATGTAGGTATAGCTCTG+AGG 0.714504 4_1:-6125254 None:intergenic
AAGCTGTAATACGTGCTGGG+AGG 0.724449 4_1:-6125905 None:intergenic
CAACAGAACCAAGGTCACGT+GGG 0.726867 4_1:+6119903 Msa0532100:CDS
GAAAATGACCAATCAATACG+AGG 0.743139 4_1:+6126200 Msa0532100:three_prime_UTR
GTAAGGATACAACAGAACCA+AGG 0.748600 4_1:+6119894 Msa0532100:CDS
AAATTATTAGGGTACCCGTG+CGG 0.792199 4_1:-6126001 None:intergenic
ATACAACTACTGTCACATGG+GGG 0.798216 4_1:-6126287 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAATTGATAGAAA+GGG - chr4_1:6119070-6119089 None:intergenic 10.0%
!! AAAAAAAAAAATTGATAGAA+AGG - chr4_1:6119071-6119090 None:intergenic 10.0%
!!! TTTTTTTTTTGTATTTGTTT+AGG + chr4_1:6119871-6119890 Msa0532100:intron 10.0%
!!! TTTTTTTTTGTATTTGTTTA+GGG + chr4_1:6119872-6119891 Msa0532100:intron 10.0%
!!! AAATGAAACTTTTTTTTTAA+GGG + chr4_1:6124531-6124550 Msa0532100:intron 10.0%
!!! CTTTATTTATCTTTTTATAG+AGG - chr4_1:6119128-6119147 None:intergenic 15.0%
!!! ATCATTTAAAGCAAATTTTA+TGG - chr4_1:6121588-6121607 None:intergenic 15.0%
!!! GTTTGTACATTATTATTTTA+TGG + chr4_1:6121665-6121684 Msa0532100:intron 15.0%
!!! AACAATATATATTTTAAAGC+TGG + chr4_1:6122715-6122734 Msa0532100:intron 15.0%
!! TAATTAATTATAATCAGTTC+TGG + chr4_1:6122961-6122980 Msa0532100:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - chr4_1:6123217-6123236 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr4_1:6123344-6123363 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr4_1:6123343-6123362 Msa0532100:intron 15.0%
!!! GAAATGAAACTTTTTTTTTA+AGG + chr4_1:6124530-6124549 Msa0532100:intron 15.0%
!!! AATGAAACTTTTTTTTTAAG+GGG + chr4_1:6124532-6124551 Msa0532100:intron 15.0%
!!! AAAATTGGTTACTATTTTAT+AGG - chr4_1:6124729-6124748 None:intergenic 15.0%
!!! TATAAAATAGTAACCAATTT+TGG + chr4_1:6124728-6124747 Msa0532100:intron 15.0%
!!! TTATATTTTGGCTTATTATA+TGG + chr4_1:6125795-6125814 Msa0532100:intron 15.0%
!! ATAAATAAAGAGATAAACAC+TGG + chr4_1:6119138-6119157 Msa0532100:five_prime_UTR 20.0%
!! ATATAACATAGCTATCAAAA+AGG + chr4_1:6119173-6119192 Msa0532100:five_prime_UTR 20.0%
!!! ATGATGTTTGTTTCTATTTT+TGG + chr4_1:6120054-6120073 Msa0532100:intron 20.0%
!! TATACTAAAATAACTGTACA+TGG + chr4_1:6120446-6120465 Msa0532100:intron 20.0%
!!! GAAATTAAGTTTTCAAAAAG+AGG - chr4_1:6120640-6120659 None:intergenic 20.0%
!! CTTTATAATACTTCTACATA+TGG - chr4_1:6120840-6120859 None:intergenic 20.0%
!! TTTGTATAATACTCAGAATT+TGG - chr4_1:6121292-6121311 None:intergenic 20.0%
!! TTATACAAATACATCTAACT+TGG + chr4_1:6121303-6121322 Msa0532100:CDS 20.0%
!! TATACAAATACATCTAACTT+GGG + chr4_1:6121304-6121323 Msa0532100:CDS 20.0%
!!! ATATGATGATAATTTGTACA+AGG + chr4_1:6121471-6121490 Msa0532100:CDS 20.0%
!! TTCTATAACTTAGATATTTC+TGG - chr4_1:6121738-6121757 None:intergenic 20.0%
!! TAAGTTATAGAAATAGCATA+AGG + chr4_1:6121746-6121765 Msa0532100:intron 20.0%
!!! GGTGATATTATTATTTCTAT+TGG + chr4_1:6121798-6121817 Msa0532100:intron 20.0%
!! GCTCTTTAATTAACTAAAAT+TGG + chr4_1:6122749-6122768 Msa0532100:intron 20.0%
!! TAAATGATATAACTAGAGTT+TGG + chr4_1:6122776-6122795 Msa0532100:intron 20.0%
!! TTTGTTAAAATTTCTTTCTC+CGG + chr4_1:6123053-6123072 Msa0532100:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr4_1:6123257-6123276 None:intergenic 20.0%
!!! TAGTTTTAAAAGTAATACCT+TGG - chr4_1:6123320-6123339 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr4_1:6123334-6123353 Msa0532100:intron 20.0%
!! TCTAACTTATATTGCTTTAT+AGG + chr4_1:6123598-6123617 Msa0532100:intron 20.0%
!! ATATAAGTTATGATATGTTC+TGG + chr4_1:6124097-6124116 Msa0532100:intron 20.0%
!! ATAATTAAAGTAGAATTACC+AGG + chr4_1:6124492-6124511 Msa0532100:intron 20.0%
!! TATATTGATACTTCCAAAAT+TGG - chr4_1:6124744-6124763 None:intergenic 20.0%
!!! TTTTATCCCAAATTTTGTTA+CGG + chr4_1:6124794-6124813 Msa0532100:intron 20.0%
!! AAGATTTATTAGAGTTAGTT+TGG - chr4_1:6124947-6124966 None:intergenic 20.0%
!! TCAATTATAATCATCTTTAC+TGG - chr4_1:6124972-6124991 None:intergenic 20.0%
!! TAACTTATCATATTAGCAAA+AGG - chr4_1:6125224-6125243 None:intergenic 20.0%
!!! GAAATGCTATTTTTATATTG+TGG - chr4_1:6125344-6125363 None:intergenic 20.0%
!!! TCATATGACTTGTTATATTT+TGG + chr4_1:6125783-6125802 Msa0532100:intron 20.0%
!! AGATGAGAAAAATGTAAAAT+GGG - chr4_1:6126394-6126413 None:intergenic 20.0%
!! AAGATGAGAAAAATGTAAAA+TGG - chr4_1:6126395-6126414 None:intergenic 20.0%
!! AAAAAGCTGTTAATAACATA+CGG - chr4_1:6126522-6126541 None:intergenic 20.0%
!!! AGTTACGATTGTTTCTTTTT+TGG + chr4_1:6119331-6119350 Msa0532100:five_prime_UTR 25.0%
!!! TTTTGTATTTGTTTAGGGTA+AGG + chr4_1:6119877-6119896 Msa0532100:intron 25.0%
! ACATACCATTATTACTGAAT+TGG - chr4_1:6120021-6120040 None:intergenic 25.0%
!!! AAGACTTTTTTACACTAAAG+TGG - chr4_1:6120130-6120149 None:intergenic 25.0%
!! TCCATTTTCTTTCTTAAACA+CGG - chr4_1:6120320-6120339 None:intergenic 25.0%
! GGATAAAAACTAAATTCTTG+TGG + chr4_1:6120476-6120495 Msa0532100:intron 25.0%
!!! ATTTTCAAGCCATATAGAAA+CGG - chr4_1:6120556-6120575 None:intergenic 25.0%
!! TTATTCTTATCTAAAACAGC+TGG + chr4_1:6120675-6120694 Msa0532100:intron 25.0%
!!! TTAATTCTGTGGATTAGTTA+TGG + chr4_1:6120713-6120732 Msa0532100:intron 25.0%
!! AAATCAATAAATGCCCATTT+TGG + chr4_1:6120769-6120788 Msa0532100:intron 25.0%
! TTACATCTCATTTATCTTCA+GGG - chr4_1:6120797-6120816 None:intergenic 25.0%
! TTTACATCTCATTTATCTTC+AGG - chr4_1:6120798-6120817 None:intergenic 25.0%
!!! ACTAAACAGTATTGATATGA+AGG + chr4_1:6120869-6120888 Msa0532100:intron 25.0%
! TTACTGAAGCAAATAATGAA+TGG + chr4_1:6121146-6121165 Msa0532100:CDS 25.0%
! ATAATACTCAGAATTTGGAT+GGG - chr4_1:6121287-6121306 None:intergenic 25.0%
! TATAATACTCAGAATTTGGA+TGG - chr4_1:6121288-6121307 None:intergenic 25.0%
!!! TCATCAGATATAATTTTAGC+AGG - chr4_1:6121430-6121449 None:intergenic 25.0%
! ATTATATCTGATGATAATCC+AGG + chr4_1:6121436-6121455 Msa0532100:CDS 25.0%
!! AGCAAATTTTATGGAAAACA+TGG - chr4_1:6121579-6121598 None:intergenic 25.0%
! AGCGAATTTAATTCACATAA+TGG - chr4_1:6121632-6121651 None:intergenic 25.0%
!!! TTTTTAAAACCAACTACACA+TGG - chr4_1:6121696-6121715 None:intergenic 25.0%
!! TTTTAAACCATTCACACATA+CGG - chr4_1:6121851-6121870 None:intergenic 25.0%
!! CTATTTTATAACCACATACT+TGG - chr4_1:6122316-6122335 None:intergenic 25.0%
! CAAGTATGTGGTTATAAAAT+AGG + chr4_1:6122314-6122333 Msa0532100:intron 25.0%
!! CATTTTACTCTCTTAAGAAT+GGG - chr4_1:6122850-6122869 None:intergenic 25.0%
!!! TCTTTTTGATAGTAGAAAAC+TGG + chr4_1:6122891-6122910 Msa0532100:intron 25.0%
! GGTTATGTGATATATATGAT+TGG + chr4_1:6123022-6123041 Msa0532100:intron 25.0%
! TTGTTAAAATTTCTTTCTCC+GGG + chr4_1:6123054-6123073 Msa0532100:intron 25.0%
!! ATGTTTCATTCTTTTGGATT+GGG + chr4_1:6123077-6123096 Msa0532100:intron 25.0%
! TGTCCCATTACATTATATTA+TGG + chr4_1:6123473-6123492 Msa0532100:intron 25.0%
! GCACCATAATATAATGTAAT+GGG - chr4_1:6123479-6123498 None:intergenic 25.0%
! TGCACCATAATATAATGTAA+TGG - chr4_1:6123480-6123499 None:intergenic 25.0%
! TATTAACAAGCTATTGAAAG+AGG + chr4_1:6123811-6123830 Msa0532100:intron 25.0%
! TTCTTACCCAAATAATGTTA+TGG + chr4_1:6123880-6123899 Msa0532100:intron 25.0%
! TGAACTCCATAACATTATTT+GGG - chr4_1:6123889-6123908 None:intergenic 25.0%
! ATGAACTCCATAACATTATT+TGG - chr4_1:6123890-6123909 None:intergenic 25.0%
! CAATTGTTAACCAGAATTAT+CGG - chr4_1:6123941-6123960 None:intergenic 25.0%
! AGTACTGCAAAAATATAGTT+GGG - chr4_1:6124642-6124661 None:intergenic 25.0%
! TAGTACTGCAAAAATATAGT+TGG - chr4_1:6124643-6124662 None:intergenic 25.0%
!! TTTATCCCAAATTTTGTTAC+GGG + chr4_1:6124795-6124814 Msa0532100:intron 25.0%
! TACATATACACAAACAATGT+TGG - chr4_1:6124885-6124904 None:intergenic 25.0%
!!! TTTTAACCCCCTTTTTTTAA+GGG + chr4_1:6124917-6124936 Msa0532100:intron 25.0%
!!! GACATAGTTTAGTTTTAAGT+TGG + chr4_1:6124990-6125009 Msa0532100:intron 25.0%
!!! ATTTTTTTTTGTCAAGATGC+AGG + chr4_1:6125070-6125089 Msa0532100:intron 25.0%
! ATGATTGTTATCCTTATACT+GGG - chr4_1:6125510-6125529 None:intergenic 25.0%
! TATGATTGTTATCCTTATAC+TGG - chr4_1:6125511-6125530 None:intergenic 25.0%
!! TCAACTTTAATCAAGCATTT+TGG - chr4_1:6125569-6125588 None:intergenic 25.0%
! TTAGAGAAGAAAGATTAACA+GGG - chr4_1:6125599-6125618 None:intergenic 25.0%
!! TCTTTATGTCATGTTCTTTT+TGG + chr4_1:6125711-6125730 Msa0532100:intron 25.0%
!!! ATTTTGGCTTATTATATGGA+AGG + chr4_1:6125799-6125818 Msa0532100:intron 25.0%
! GAGAATGGTAGAAATTATTA+GGG - chr4_1:6126015-6126034 None:intergenic 25.0%
! TGAGAATGGTAGAAATTATT+AGG - chr4_1:6126016-6126035 None:intergenic 25.0%
! ATGTTAAATGTACCATTGTT+TGG + chr4_1:6126238-6126257 Msa0532100:three_prime_UTR 25.0%
!!! AAAGAGTATTGTTGTAATAC+AGG - chr4_1:6126369-6126388 None:intergenic 25.0%
! TAATGATGACCAAGAATAAA+AGG - chr4_1:6126458-6126477 None:intergenic 25.0%
! GTAGAGATAAGTATTGTGAT+CGG + chr4_1:6119406-6119425 Msa0532100:five_prime_UTR 30.0%
CAAACGAGAAAAGAAAAAAG+AGG + chr4_1:6119771-6119790 Msa0532100:CDS 30.0%
AATTATAATATACCGAGTCG+CGG + chr4_1:6119929-6119948 Msa0532100:CDS 30.0%
TCGAACCAATTCAGTAATAA+TGG + chr4_1:6120013-6120032 Msa0532100:CDS 30.0%
AATGGTATGTATTTCGAATC+TGG + chr4_1:6120031-6120050 Msa0532100:intron 30.0%
AAAGTCATCAAATCGTTTCT+TGG - chr4_1:6120213-6120232 None:intergenic 30.0%
!! TTAATTTTCGCCGTTGTTTT+TGG + chr4_1:6120263-6120282 Msa0532100:intron 30.0%
AGTCTGATTTCCAAAAACAA+CGG - chr4_1:6120276-6120295 None:intergenic 30.0%
!!! TGTTTTTGGAAATCAGACTA+TGG + chr4_1:6120277-6120296 Msa0532100:intron 30.0%
! CCATTTTCTTTCTTAAACAC+GGG - chr4_1:6120319-6120338 None:intergenic 30.0%
! TGATGGACAATAATGTAAAC+AGG + chr4_1:6120383-6120402 Msa0532100:CDS 30.0%
AAAGATAAATACCTCCAAGA+TGG - chr4_1:6120415-6120434 None:intergenic 30.0%
CTAAAATAACTGTACATGGT+TGG + chr4_1:6120450-6120469 Msa0532100:intron 30.0%
TAAATCTAGCCGTTTCTATA+TGG + chr4_1:6120544-6120563 Msa0532100:intron 30.0%
AAAATCCGATGCTATTGAAA+AGG + chr4_1:6120571-6120590 Msa0532100:intron 30.0%
AAATCCGATGCTATTGAAAA+GGG + chr4_1:6120572-6120591 Msa0532100:intron 30.0%
!!! AACTTGCTTTTGGGATAAAT+TGG - chr4_1:6120603-6120622 None:intergenic 30.0%
AATTTATCCCAAAAGCAAGT+TGG + chr4_1:6120602-6120621 Msa0532100:intron 30.0%
TACATCTCATTTATCTTCAG+GGG - chr4_1:6120796-6120815 None:intergenic 30.0%
ATACTTCTACATATGGAAGA+GGG - chr4_1:6120833-6120852 None:intergenic 30.0%
AATACTTCTACATATGGAAG+AGG - chr4_1:6120834-6120853 None:intergenic 30.0%
ACTGCAACAGAATTGAATAA+TGG - chr4_1:6120912-6120931 None:intergenic 30.0%
TGATCATGTAATTGAAGTGA+TGG + chr4_1:6121604-6121623 Msa0532100:intron 30.0%
GTATGTGTGAATGGTTTAAA+AGG + chr4_1:6121850-6121869 Msa0532100:intron 30.0%
ATATTCCTTTCAGCTGAAAA+TGG + chr4_1:6122021-6122040 Msa0532100:intron 30.0%
! GATCCTGTTTGTTAAAAACT+AGG + chr4_1:6122800-6122819 Msa0532100:intron 30.0%
!! TGACCTAGTTTTTAACAAAC+AGG - chr4_1:6122806-6122825 None:intergenic 30.0%
! CCATTTTACTCTCTTAAGAA+TGG - chr4_1:6122851-6122870 None:intergenic 30.0%
CCATTCTTAAGAGAGTAAAA+TGG + chr4_1:6122848-6122867 Msa0532100:intron 30.0%
! GATGTTTCATTCTTTTGGAT+TGG + chr4_1:6123076-6123095 Msa0532100:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr4_1:6123425-6123444 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr4_1:6123426-6123445 Msa0532100:intron 30.0%
GAGTTCATGTGTACATTAAA+GGG + chr4_1:6123902-6123921 Msa0532100:intron 30.0%
TATGATGCACAAATACGATA+CGG + chr4_1:6124053-6124072 Msa0532100:intron 30.0%
AAAAAAAGTTTCATTTCCCC+TGG - chr4_1:6124527-6124546 None:intergenic 30.0%
GAATACCCGTAACAAAATTT+GGG - chr4_1:6124803-6124822 None:intergenic 30.0%
GAAATAGCAAAGTGAATCAA+AGG + chr4_1:6124823-6124842 Msa0532100:intron 30.0%
AATCAAAGGAATGTTCTTAG+AGG + chr4_1:6124837-6124856 Msa0532100:intron 30.0%
ATCAAAGGAATGTTCTTAGA+GGG + chr4_1:6124838-6124857 Msa0532100:intron 30.0%
!! GTTTTAACCCCCTTTTTTTA+AGG + chr4_1:6124916-6124935 Msa0532100:intron 30.0%
!! AGTTGGTGTCTTGATTTTAT+TGG + chr4_1:6125007-6125026 Msa0532100:intron 30.0%
!!! TGTCTTGATTTTATTGGTTC+AGG + chr4_1:6125013-6125032 Msa0532100:intron 30.0%
!!! GTCTTGATTTTATTGGTTCA+GGG + chr4_1:6125014-6125033 Msa0532100:intron 30.0%
! CTTTAATCAAGCATTTTGGA+AGG - chr4_1:6125565-6125584 None:intergenic 30.0%
CTTAGAGAAGAAAGATTAAC+AGG - chr4_1:6125600-6125619 None:intergenic 30.0%
TACATTTAACATTAGACCGT+GGG - chr4_1:6126230-6126249 None:intergenic 30.0%
! TATATGGCTCCTTTTATTCT+TGG + chr4_1:6126446-6126465 Msa0532100:three_prime_UTR 30.0%
! TTTTCTATCTCTCTCTCTCT+CGG - chr4_1:6119300-6119319 None:intergenic 35.0%
AGAGATAGAAAACACGAAGA+GGG + chr4_1:6119308-6119327 Msa0532100:five_prime_UTR 35.0%
AGTTAGTGATGAGAGAGAAA+GGG - chr4_1:6119670-6119689 None:intergenic 35.0%
TAGTTAGTGATGAGAGAGAA+AGG - chr4_1:6119671-6119690 None:intergenic 35.0%
TCTCTCATCACTAACTAGTT+AGG + chr4_1:6119674-6119693 Msa0532100:intron 35.0%
CTCTCATCACTAACTAGTTA+GGG + chr4_1:6119675-6119694 Msa0532100:intron 35.0%
! TCTTGTAGATCCTTTTCATG+AGG + chr4_1:6119741-6119760 Msa0532100:intron 35.0%
TTGCTCTTAACCTCATGAAA+AGG - chr4_1:6119754-6119773 None:intergenic 35.0%
CCCGTGTTTAAGAAAGAAAA+TGG + chr4_1:6120316-6120335 Msa0532100:CDS 35.0%
TCTTGTGGTTATGATGTGTT+TGG + chr4_1:6120491-6120510 Msa0532100:intron 35.0%
!!! TTGCTTTTGGGATAAATTGG+AGG - chr4_1:6120600-6120619 None:intergenic 35.0%
TATTGATATGAAGGCCAAGA+TGG + chr4_1:6120878-6120897 Msa0532100:intron 35.0%
TGAACATTGGGTTCAATAGA+AGG - chr4_1:6121172-6121191 None:intergenic 35.0%
TCATCACTCTGTTGAACATT+GGG - chr4_1:6121184-6121203 None:intergenic 35.0%
TTCATCACTCTGTTGAACAT+TGG - chr4_1:6121185-6121204 None:intergenic 35.0%
ATGTTCAACAGAGTGATGAA+TGG + chr4_1:6121185-6121204 Msa0532100:CDS 35.0%
TCATCACTCTGTTGAACATT+GGG - chr4_1:6121184-6121203 None:intergenic 35.0%
TTCATCACTCTGTTGAACAT+TGG - chr4_1:6121185-6121204 None:intergenic 35.0%
ATGTTCAACAGAGTGATGAA+TGG + chr4_1:6121185-6121204 Msa0532100:CDS 35.0%
! ATCCATTTGTTGAGTCAATC+TGG + chr4_1:6121777-6121796 Msa0532100:intron 35.0%
! CAATTAGAAAGCATACACAC+AGG - chr4_1:6121901-6121920 None:intergenic 35.0%
! AAACACCATTTTCAGCTGAA+AGG - chr4_1:6122029-6122048 None:intergenic 35.0%
TGAAAATGGTGTTTCATCAG+TGG + chr4_1:6122035-6122054 Msa0532100:CDS 35.0%
AATTTACACACAGATGAGCA+AGG + chr4_1:6122078-6122097 Msa0532100:CDS 35.0%
ATTTACACACAGATGAGCAA+GGG + chr4_1:6122079-6122098 Msa0532100:CDS 35.0%
!! GAAACAGTGGCATTTTGTTT+TGG - chr4_1:6122201-6122220 None:intergenic 35.0%
AAACAAAATGCCACTGTTTC+TGG + chr4_1:6122201-6122220 Msa0532100:CDS 35.0%
! TCCTCCAAGTTACTTTGTAA+GGG - chr4_1:6122249-6122268 None:intergenic 35.0%
CTACTGATGTTTCAGCAATT+GGG + chr4_1:6122280-6122299 Msa0532100:CDS 35.0%
! ATATGCAACTTCTGGTTGTT+GGG - chr4_1:6122605-6122624 None:intergenic 35.0%
ATTACCATTACACTGGAGAA+GGG - chr4_1:6122667-6122686 None:intergenic 35.0%
!! TGCATTGGTCTGTTAGATTT+TGG + chr4_1:6122686-6122705 Msa0532100:intron 35.0%
! TTTAAAGCTGGTGTCTAGTT+TGG + chr4_1:6122727-6122746 Msa0532100:intron 35.0%
GTTAAAAACTAGGTCATCGT+TGG + chr4_1:6122810-6122829 Msa0532100:intron 35.0%
TCCAAAAGAATGAAACATCC+CGG - chr4_1:6123075-6123094 None:intergenic 35.0%
TAAGGAAAGGGTTTGTATAC+AGG - chr4_1:6123159-6123178 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr4_1:6123191-6123210 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr4_1:6123291-6123310 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr4_1:6123295-6123314 None:intergenic 35.0%
GGAGTTCATGTGTACATTAA+AGG + chr4_1:6123901-6123920 Msa0532100:intron 35.0%
AGAAATTTGCATTCCCTTAG+CGG - chr4_1:6123987-6124006 None:intergenic 35.0%
GTATCGTATTTGTGCATCAT+AGG - chr4_1:6124054-6124073 None:intergenic 35.0%
ATGATGCACAAATACGATAC+GGG + chr4_1:6124054-6124073 Msa0532100:intron 35.0%
GGCAAAAAGTTTCTCTTGTT+CGG + chr4_1:6124611-6124630 Msa0532100:intron 35.0%
GTAGATGACTAGCATTTATC+AGG - chr4_1:6124679-6124698 None:intergenic 35.0%
ATAAATGCTAGTCATCTACG+AGG + chr4_1:6124680-6124699 Msa0532100:intron 35.0%
TAAATGCTAGTCATCTACGA+GGG + chr4_1:6124681-6124700 Msa0532100:intron 35.0%
CGAATACCCGTAACAAAATT+TGG - chr4_1:6124804-6124823 None:intergenic 35.0%
TCAAAGGAATGTTCTTAGAG+GGG + chr4_1:6124839-6124858 Msa0532100:intron 35.0%
TTGGCGTACCCTTAAAAAAA+GGG - chr4_1:6124928-6124947 None:intergenic 35.0%
TTTGGCGTACCCTTAAAAAA+AGG - chr4_1:6124929-6124948 None:intergenic 35.0%
!!! ATTTTATTGGTTCAGGGAGA+GGG + chr4_1:6125020-6125039 Msa0532100:intron 35.0%
! ATACCATCTGGATATGGTTT+TGG + chr4_1:6125392-6125411 Msa0532100:CDS 35.0%
ATCCAATGGTTGTACTAGTA+GGG - chr4_1:6125469-6125488 None:intergenic 35.0%
TATCCAATGGTTGTACTAGT+AGG - chr4_1:6125470-6125489 None:intergenic 35.0%
TATCACGTCATCATATCCAA+TGG - chr4_1:6125483-6125502 None:intergenic 35.0%
TCATATGATTTCACTTCAGC+AGG + chr4_1:6125526-6125545 Msa0532100:CDS 35.0%
TTTACATTACAATGGCTGCA+TGG - chr4_1:6125651-6125670 None:intergenic 35.0%
GCCATTGTAATGTAAACAGA+CGG + chr4_1:6125655-6125674 Msa0532100:intron 35.0%
CCATTGTAATGTAAACAGAC+GGG + chr4_1:6125656-6125675 Msa0532100:intron 35.0%
AGACAACTAAATGTAGCACA+TGG - chr4_1:6125694-6125713 None:intergenic 35.0%
!! ATGTCATGTTCTTTTTGGCA+AGG + chr4_1:6125716-6125735 Msa0532100:intron 35.0%
AGAATGAGAACAATCCTATG+TGG + chr4_1:6125849-6125868 Msa0532100:intron 35.0%
GAATGAGAACAATCCTATGT+GGG + chr4_1:6125850-6125869 Msa0532100:intron 35.0%
AATTTCTACCATTCTCAGAG+TGG + chr4_1:6126019-6126038 Msa0532100:CDS 35.0%
ATTTCTACCATTCTCAGAGT+GGG + chr4_1:6126020-6126039 Msa0532100:CDS 35.0%
!! GTTTTGCCACAATTGTTGTT+GGG - chr4_1:6126122-6126141 None:intergenic 35.0%
! TGTTTTGCCACAATTGTTGT+TGG - chr4_1:6126123-6126142 None:intergenic 35.0%
ACATCAAGACCCTTAAAAAC+CGG - chr4_1:6126167-6126186 None:intergenic 35.0%
GAAAATGACCAATCAATACG+AGG + chr4_1:6126200-6126219 Msa0532100:three_prime_UTR 35.0%
GTACATTTAACATTAGACCG+TGG - chr4_1:6126231-6126250 None:intergenic 35.0%
AATACAACTACTGTCACATG+GGG - chr4_1:6126291-6126310 None:intergenic 35.0%
GAATACAACTACTGTCACAT+GGG - chr4_1:6126292-6126311 None:intergenic 35.0%
AGAATACAACTACTGTCACA+TGG - chr4_1:6126293-6126312 None:intergenic 35.0%
TGTTAATAACATACGGACGA+TGG - chr4_1:6126515-6126534 None:intergenic 35.0%
GAGAGATAGAAAACACGAAG+AGG + chr4_1:6119307-6119326 Msa0532100:five_prime_UTR 40.0%
! TAAGTATTGTGATCGGAGTG+CGG + chr4_1:6119413-6119432 Msa0532100:five_prime_UTR 40.0%
AGGTACATCATCATCGTTGT+CGG + chr4_1:6119494-6119513 Msa0532100:CDS 40.0%
! CATGTTACAGTCTTTGAGAG+TGG - chr4_1:6119598-6119617 None:intergenic 40.0%
CACTCTCAAAGACTGTAACA+TGG + chr4_1:6119596-6119615 Msa0532100:CDS 40.0%
GTTAGTCGTCTTCTTTCTCA+AGG + chr4_1:6119633-6119652 Msa0532100:CDS 40.0%
GTAAGGATACAACAGAACCA+AGG + chr4_1:6119894-6119913 Msa0532100:CDS 40.0%
GTCTTATGCATCTAGTGTGA+TGG + chr4_1:6120366-6120385 Msa0532100:CDS 40.0%
GATAAATACCTCCAAGATGG+TGG - chr4_1:6120412-6120431 None:intergenic 40.0%
ATAACTGTACATGGTTGGAG+TGG + chr4_1:6120455-6120474 Msa0532100:intron 40.0%
! GGAACCCTTTTCAATAGCAT+CGG - chr4_1:6120579-6120598 None:intergenic 40.0%
!! TTGACAGCCAACTTGCTTTT+GGG - chr4_1:6120612-6120631 None:intergenic 40.0%
!! TTTGACAGCCAACTTGCTTT+TGG - chr4_1:6120613-6120632 None:intergenic 40.0%
!! CTCTGTGCTGATTAATTCTG+TGG + chr4_1:6120702-6120721 Msa0532100:intron 40.0%
TATCTTCAGGGGACCAAAAT+GGG - chr4_1:6120785-6120804 None:intergenic 40.0%
TTATCTTCAGGGGACCAAAA+TGG - chr4_1:6120786-6120805 None:intergenic 40.0%
TAATGGTGAAACAGCCATCT+TGG - chr4_1:6120895-6120914 None:intergenic 40.0%
TTCTGTTGCAGTGATTCTGT+TGG + chr4_1:6120920-6120939 Msa0532100:intron 40.0%
CTGTCTTCATCATCACATCA+TGG + chr4_1:6120956-6120975 Msa0532100:CDS 40.0%
TCTTCATCATCACATCATGG+TGG + chr4_1:6120959-6120978 Msa0532100:CDS 40.0%
AATGGCTGACATTGTCAAGA+TGG + chr4_1:6121021-6121040 Msa0532100:CDS 40.0%
ATGGCTGACATTGTCAAGAT+GGG + chr4_1:6121022-6121041 Msa0532100:CDS 40.0%
CTAAATCTTCTGTCCACAGT+GGG + chr4_1:6121071-6121090 Msa0532100:CDS 40.0%
!! AACATTCAAGTTGTGATGCG+AGG - chr4_1:6121128-6121147 None:intergenic 40.0%
TGAACATTGGGGTCAATAGA+AGG - chr4_1:6121211-6121230 None:intergenic 40.0%
CATCACTCTGTTGAACATTG+GGG - chr4_1:6121183-6121202 None:intergenic 40.0%
CATCAACAACAACTGTTGGT+GGG - chr4_1:6121264-6121283 None:intergenic 40.0%
AATAGACAACTGCAGAACCA+CGG + chr4_1:6121334-6121353 Msa0532100:CDS 40.0%
CAGCTACAAATTCATTTCCG+TGG - chr4_1:6121354-6121373 None:intergenic 40.0%
GATGAGAATCCTGTTGATGT+TGG + chr4_1:6121391-6121410 Msa0532100:CDS 40.0%
!! CATCCTTTTGATGACAACGA+AGG + chr4_1:6121520-6121539 Msa0532100:CDS 40.0%
TCACCTTCGTTGTCATCAAA+AGG - chr4_1:6121526-6121545 None:intergenic 40.0%
ATGGTTGTTCCATGTGTAGT+TGG + chr4_1:6121684-6121703 Msa0532100:intron 40.0%
! CACCAGATTGACTCAACAAA+TGG - chr4_1:6121782-6121801 None:intergenic 40.0%
TCTAACTCCGTATGTGTGAA+TGG + chr4_1:6121841-6121860 Msa0532100:intron 40.0%
AAAGCATACACACAGGTACA+TGG - chr4_1:6121894-6121913 None:intergenic 40.0%
ACATGTGCCTTACATACATG+TGG + chr4_1:6121975-6121994 Msa0532100:intron 40.0%
TCAGAGACCACATGTATGTA+AGG - chr4_1:6121985-6122004 None:intergenic 40.0%
GGTCTCTGAGTCTTAATTTC+TGG + chr4_1:6121996-6122015 Msa0532100:intron 40.0%
GTATGGAGTTGTAGGTGATT+TGG - chr4_1:6122141-6122160 None:intergenic 40.0%
!! GACTAAAACACTCTGGAGTA+TGG - chr4_1:6122158-6122177 None:intergenic 40.0%
AAGCTCAGACTAAAACACTC+TGG - chr4_1:6122165-6122184 None:intergenic 40.0%
!!! GAGTGTTTTAGTCTGAGCTT+TGG + chr4_1:6122165-6122184 Msa0532100:CDS 40.0%
!!! AGTCTGAGCTTTGGAAGTTT+TGG + chr4_1:6122174-6122193 Msa0532100:CDS 40.0%
TAGGCCCTTACAAAGTAACT+TGG + chr4_1:6122242-6122261 Msa0532100:CDS 40.0%
! CTCCTCCAAGTTACTTTGTA+AGG - chr4_1:6122250-6122269 None:intergenic 40.0%
GCTACTGATGTTTCAGCAAT+TGG + chr4_1:6122279-6122298 Msa0532100:CDS 40.0%
TGCAGAAATCCCGACTATTA+TGG + chr4_1:6122397-6122416 Msa0532100:intron 40.0%
GCAGAAATCCCGACTATTAT+GGG + chr4_1:6122398-6122417 Msa0532100:intron 40.0%
CAGAAATCCCGACTATTATG+GGG + chr4_1:6122399-6122418 Msa0532100:intron 40.0%
ATGCTCATCCCCATAATAGT+CGG - chr4_1:6122410-6122429 None:intergenic 40.0%
CATATTGCTACTACCTCAGA+TGG + chr4_1:6122427-6122446 Msa0532100:CDS 40.0%
GGCAATATATCCCACATAAC+TGG + chr4_1:6122448-6122467 Msa0532100:CDS 40.0%
TATATCCCACATAACTGGTG+TGG + chr4_1:6122453-6122472 Msa0532100:CDS 40.0%
TTCTTCCATTTCACAACCAG+AGG + chr4_1:6122495-6122514 Msa0532100:CDS 40.0%
TAAAGCCTCTGGTTGTGAAA+TGG - chr4_1:6122503-6122522 None:intergenic 40.0%
! TTTTCCTGAGCAGTTTCAGA+GGG - chr4_1:6122535-6122554 None:intergenic 40.0%
! ATTTTCCTGAGCAGTTTCAG+AGG - chr4_1:6122536-6122555 None:intergenic 40.0%
GTAAACTCATGCGAAGATGA+AGG - chr4_1:6122571-6122590 None:intergenic 40.0%
! GATATGCAACTTCTGGTTGT+TGG - chr4_1:6122606-6122625 None:intergenic 40.0%
GAATGAGGATATGCAACTTC+TGG - chr4_1:6122613-6122632 None:intergenic 40.0%
CATTACCATTACACTGGAGA+AGG - chr4_1:6122668-6122687 None:intergenic 40.0%
CCAATGCATTACCATTACAC+TGG - chr4_1:6122674-6122693 None:intergenic 40.0%
! CCAGTGTAATGGTAATGCAT+TGG + chr4_1:6122671-6122690 Msa0532100:intron 40.0%
CTTATTACGCGGTTTCACAT+TGG - chr4_1:6122993-6123012 None:intergenic 40.0%
TGAAACCGCGTAATAAGCTA+GGG + chr4_1:6122996-6123015 Msa0532100:intron 40.0%
! TCCGGGATGTTTCATTCTTT+TGG + chr4_1:6123071-6123090 Msa0532100:intron 40.0%
!! TTCTTTTGGATTGGGTGATG+TGG + chr4_1:6123085-6123104 Msa0532100:intron 40.0%
!! TCTTTTGGATTGGGTGATGT+GGG + chr4_1:6123086-6123105 Msa0532100:intron 40.0%
!! TTGAAACGGAGGGAGTATTA+AGG - chr4_1:6123177-6123196 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr4_1:6123430-6123449 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr4_1:6123292-6123311 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr4_1:6123430-6123449 Msa0532100:intron 40.0%
CTGTCGTGTGGTAATAACAT+AGG + chr4_1:6123510-6123529 Msa0532100:intron 40.0%
TTCAACGGTTCAAACACCAA+GGG + chr4_1:6123655-6123674 Msa0532100:CDS 40.0%
ATTGCTTGTGTAACAGGGAA+GGG - chr4_1:6123698-6123717 None:intergenic 40.0%
GCCTGCAAAATATAGCAACA+TGG + chr4_1:6123718-6123737 Msa0532100:CDS 40.0%
! GCCATGTTGCTATATTTTGC+AGG - chr4_1:6123722-6123741 None:intergenic 40.0%
AGCAACATGGCTTCTTCAAT+TGG + chr4_1:6123731-6123750 Msa0532100:CDS 40.0%
AACATGGCTTCTTCAATTGG+TGG + chr4_1:6123734-6123753 Msa0532100:CDS 40.0%
TTCCACGATAAACATGTCAG+AGG + chr4_1:6123757-6123776 Msa0532100:CDS 40.0%
TACCTCTGACATGTTTATCG+TGG - chr4_1:6123762-6123781 None:intergenic 40.0%
TGATGCACAAATACGATACG+GGG + chr4_1:6124055-6124074 Msa0532100:intron 40.0%
AAAAGTTTCATTTCCCCTGG+AGG - chr4_1:6124524-6124543 None:intergenic 40.0%
GGGAAATGAAACTCGATATG+AGG + chr4_1:6124552-6124571 Msa0532100:intron 40.0%
AAATGACGAACGAAAGCTGA+AGG + chr4_1:6124575-6124594 Msa0532100:intron 40.0%
TGGCGTACCCTTAAAAAAAG+GGG - chr4_1:6124927-6124946 None:intergenic 40.0%
!!! GATTTTATTGGTTCAGGGAG+AGG + chr4_1:6125019-6125038 Msa0532100:intron 40.0%
TTGTCAAGATGCAGGCTTTA+AGG + chr4_1:6125078-6125097 Msa0532100:intron 40.0%
! TGTCAAGATGCAGGCTTTAA+GGG + chr4_1:6125079-6125098 Msa0532100:intron 40.0%
!! TGTTGATTAGGTTGAGCTTG+AGG - chr4_1:6125122-6125141 None:intergenic 40.0%
! CCAGGCAAAGATTGTTGATT+AGG - chr4_1:6125134-6125153 None:intergenic 40.0%
CCTAATCAACAATCTTTGCC+TGG + chr4_1:6125131-6125150 Msa0532100:CDS 40.0%
CTTCCAAAACCATATCCAGA+TGG - chr4_1:6125398-6125417 None:intergenic 40.0%
TTCAAAGGATAGTTTCCACC+AGG - chr4_1:6125434-6125453 None:intergenic 40.0%
TCCAATGGTTGTACTAGTAG+GGG - chr4_1:6125468-6125487 None:intergenic 40.0%
CGTGATAAACTCCCAGTATA+AGG + chr4_1:6125496-6125515 Msa0532100:CDS 40.0%
CCCGTCTGTTTACATTACAA+TGG - chr4_1:6125659-6125678 None:intergenic 40.0%
! TTTCTTTTCCTAACCACCAC+TGG - chr4_1:6125752-6125771 None:intergenic 40.0%
AACAATCCTATGTGGGTTCA+AGG + chr4_1:6125857-6125876 Msa0532100:CDS 40.0%
ACAATCCTATGTGGGTTCAA+GGG + chr4_1:6125858-6125877 Msa0532100:CDS 40.0%
CAGAATCAACAACAACAACC+AGG + chr4_1:6125935-6125954 Msa0532100:CDS 40.0%
! AAATTATTAGGGTACCCGTG+CGG - chr4_1:6126004-6126023 None:intergenic 40.0%
! AATTGTTGTTGGGACTGCTT+AGG - chr4_1:6126112-6126131 None:intergenic 40.0%
TACTAATCCTAATCACCTCC+CGG + chr4_1:6126145-6126164 Msa0532100:exon 40.0%
TTAAAAACCGGGAGGTGATT+AGG - chr4_1:6126155-6126174 None:intergenic 40.0%
! TAATCACCTCCCGGTTTTTA+AGG + chr4_1:6126154-6126173 Msa0532100:three_prime_UTR 40.0%
! AATCACCTCCCGGTTTTTAA+GGG + chr4_1:6126155-6126174 Msa0532100:three_prime_UTR 40.0%
CATCAAGACCCTTAAAAACC+GGG - chr4_1:6126166-6126185 None:intergenic 40.0%
ATACAACTACTGTCACATGG+GGG - chr4_1:6126290-6126309 None:intergenic 40.0%
TACGCTCGTGATGTTAACTT+AGG + chr4_1:6126323-6126342 Msa0532100:three_prime_UTR 40.0%
TCCGTGTTCTGTCTCATATA+TGG + chr4_1:6126430-6126449 Msa0532100:three_prime_UTR 40.0%
GCCATATATGAGACAGAACA+CGG - chr4_1:6126434-6126453 None:intergenic 40.0%
GGTACATCATCATCGTTGTC+GGG + chr4_1:6119495-6119514 Msa0532100:CDS 45.0%
ATCATCGTTGTCGGGTATAC+CGG + chr4_1:6119503-6119522 Msa0532100:CDS 45.0%
GTGGCATAGATCTCGTTATC+AGG - chr4_1:6119579-6119598 None:intergenic 45.0%
GACGACTAACAGCTTCGTTA+GGG - chr4_1:6119623-6119642 None:intergenic 45.0%
AGACGACTAACAGCTTCGTT+AGG - chr4_1:6119624-6119643 None:intergenic 45.0%
TAATTACTCCCACGTGACCT+TGG - chr4_1:6119914-6119933 None:intergenic 45.0%
TATAATATACCGAGTCGCGG+CGG + chr4_1:6119932-6119951 Msa0532100:CDS 45.0%
TAAACACGGGTTTACTCTGC+TGG - chr4_1:6120306-6120325 None:intergenic 45.0%
GAAAATGGAACGCCTGCTTA+TGG + chr4_1:6120331-6120350 Msa0532100:CDS 45.0%
ACTAGATGCATAAGACGTGG+AGG - chr4_1:6120362-6120381 None:intergenic 45.0%
CACACTAGATGCATAAGACG+TGG - chr4_1:6120365-6120384 None:intergenic 45.0%
GGTTCCAATGTATCTCGCTA+TGG + chr4_1:6120734-6120753 Msa0532100:intron 45.0%
GATGCCATAGCGAGATACAT+TGG - chr4_1:6120741-6120760 None:intergenic 45.0%
! GATTCTGTTGGTGTCCATGA+CGG + chr4_1:6120932-6120951 Msa0532100:CDS 45.0%
ATGATGAAGACAGTCCGTCA+TGG - chr4_1:6120949-6120968 None:intergenic 45.0%
!! ATGGTGGATTGCAATCTGCA+TGG + chr4_1:6120975-6120994 Msa0532100:CDS 45.0%
TGGATTGCAATCTGCATGGT+CGG + chr4_1:6120979-6120998 Msa0532100:CDS 45.0%
CTGACATTGTCAAGATGGGT+AGG + chr4_1:6121026-6121045 Msa0532100:CDS 45.0%
GTGGACAGAAGATTTAGGCA+CGG - chr4_1:6121068-6121087 None:intergenic 45.0%
CCACTGTGGACAGAAGATTT+AGG - chr4_1:6121073-6121092 None:intergenic 45.0%
CCTAAATCTTCTGTCCACAG+TGG + chr4_1:6121070-6121089 Msa0532100:CDS 45.0%
CATTCTGATGATTCCCACTG+TGG - chr4_1:6121087-6121106 None:intergenic 45.0%
GCATCAACAACAACTGTTGG+TGG - chr4_1:6121265-6121284 None:intergenic 45.0%
TGGGCATCAACAACAACTGT+TGG - chr4_1:6121268-6121287 None:intergenic 45.0%
AGCTGAAGACAGTTCTGTTG+AGG + chr4_1:6121369-6121388 Msa0532100:CDS 45.0%
GAAGCAGATCCAACATCAAC+AGG - chr4_1:6121403-6121422 None:intergenic 45.0%
GATAATCCAGGAACTGCTTC+TGG + chr4_1:6121448-6121467 Msa0532100:CDS 45.0%
TCATATCCAGAAGCAGTTCC+TGG - chr4_1:6121457-6121476 None:intergenic 45.0%
CAAAAGGATGTCGATGAGAC+TGG - chr4_1:6121510-6121529 None:intergenic 45.0%
ACATCAGAATTGTCCTCCTC+TGG - chr4_1:6122111-6122130 None:intergenic 45.0%
!! ACTCTGGAGTATGGAGTTGT+AGG - chr4_1:6122149-6122168 None:intergenic 45.0%
GCCCTTACAAAGTAACTTGG+AGG + chr4_1:6122245-6122264 Msa0532100:CDS 45.0%
AGTAACTTGGAGGAGACTTC+TGG + chr4_1:6122255-6122274 Msa0532100:CDS 45.0%
AACCACATACTTGGCATCTG+AGG - chr4_1:6122307-6122326 None:intergenic 45.0%
TGCTCATCCCCATAATAGTC+GGG - chr4_1:6122409-6122428 None:intergenic 45.0%
GTGGGATATATTGCCATCTG+AGG - chr4_1:6122443-6122462 None:intergenic 45.0%
AGCATCCACACCAGTTATGT+GGG - chr4_1:6122461-6122480 None:intergenic 45.0%
TAGCATCCACACCAGTTATG+TGG - chr4_1:6122462-6122481 None:intergenic 45.0%
ACATAACTGGTGTGGATGCT+AGG + chr4_1:6122461-6122480 Msa0532100:CDS 45.0%
!! GGTTCAGACTTTAAAGCCTC+TGG - chr4_1:6122514-6122533 None:intergenic 45.0%
! TGTGAGCTTGCTTGTGAATG+AGG - chr4_1:6122628-6122647 None:intergenic 45.0%
TTACACTGGAGAAGGGAGAT+AGG - chr4_1:6122660-6122679 None:intergenic 45.0%
ATCTCCCTTCTCCAGTGTAA+TGG + chr4_1:6122660-6122679 Msa0532100:CDS 45.0%
GTGAAACCGCGTAATAAGCT+AGG + chr4_1:6122995-6123014 Msa0532100:intron 45.0%
GAAACCGCGTAATAAGCTAG+GGG + chr4_1:6122997-6123016 Msa0532100:intron 45.0%
!! CGGAGGGAGTATTAAGGAAA+GGG - chr4_1:6123171-6123190 None:intergenic 45.0%
!! ACGGAGGGAGTATTAAGGAA+AGG - chr4_1:6123172-6123191 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr4_1:6123429-6123448 None:intergenic 45.0%
TACTCTGCACACTACTTCCA+AGG + chr4_1:6123300-6123319 Msa0532100:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr4_1:6123429-6123448 Msa0532100:intron 45.0%
TTCTTTGCCCAATGCTCTGT+TGG + chr4_1:6123631-6123650 Msa0532100:CDS 45.0%
! GTTGAAGCCAACAGAGCATT+GGG - chr4_1:6123641-6123660 None:intergenic 45.0%
!! CAATGCTCTGTTGGCTTCAA+CGG + chr4_1:6123640-6123659 Msa0532100:CDS 45.0%
CTTCAACGGTTCAAACACCA+AGG + chr4_1:6123654-6123673 Msa0532100:CDS 45.0%
TAACAGGGAAGGGTGAGTAT+GGG - chr4_1:6123688-6123707 None:intergenic 45.0%
CATTGCTTGTGTAACAGGGA+AGG - chr4_1:6123699-6123718 None:intergenic 45.0%
! CAGGCATTGCTTGTGTAACA+GGG - chr4_1:6123703-6123722 None:intergenic 45.0%
CAGTTACACGCCGATAATTC+TGG + chr4_1:6123928-6123947 Msa0532100:intron 45.0%
AATGACAACCACATCCGCTA+AGG + chr4_1:6123970-6123989 Msa0532100:intron 45.0%
ATGACAACCACATCCGCTAA+GGG + chr4_1:6123971-6123990 Msa0532100:intron 45.0%
ACGAAAGCTGAAGGATAGAG+TGG + chr4_1:6124584-6124603 Msa0532100:intron 45.0%
AAGGAATGTTCTTAGAGGGG+AGG + chr4_1:6124842-6124861 Msa0532100:intron 45.0%
TGTTCTTAGAGGGGAGGTTA+TGG + chr4_1:6124848-6124867 Msa0532100:intron 45.0%
GGCGTACCCTTAAAAAAAGG+GGG - chr4_1:6124926-6124945 None:intergenic 45.0%
!! GTATAGCTCTGAGGCATGAA+CGG - chr4_1:6125248-6125267 None:intergenic 45.0%
GAGCTATACCTACATGCCAT+CGG + chr4_1:6125259-6125278 Msa0532100:CDS 45.0%
GCTGCTATACCATCTGGATA+TGG + chr4_1:6125386-6125405 Msa0532100:CDS 45.0%
ATAGTTTCCACCAGGAATGC+TGG - chr4_1:6125426-6125445 None:intergenic 45.0%
!! TAAACAGACGGGTTGACATG+TGG + chr4_1:6125667-6125686 Msa0532100:intron 45.0%
!! CTTTTTGGCAAGGAGATGCA+AGG + chr4_1:6125726-6125745 Msa0532100:intron 45.0%
ACTGACATTGTTCGAGAACC+AGG - chr4_1:6125884-6125903 None:intergenic 45.0%
TGGAAGCTGTAATACGTGCT+GGG - chr4_1:6125911-6125930 None:intergenic 45.0%
AGCACGTATTACAGCTTCCA+GGG + chr4_1:6125911-6125930 Msa0532100:CDS 45.0%
!! GTTGTTGTTGATTCTGTCCC+TGG - chr4_1:6125931-6125950 None:intergenic 45.0%
! GAGAAATCCCACTCTGAGAA+TGG - chr4_1:6126030-6126049 None:intergenic 45.0%
AGCAGTCCCAACAACAATTG+TGG + chr4_1:6126113-6126132 Msa0532100:CDS 45.0%
!!! TTTTTTTTTTTTTTTATTAC+TGG + chr4_1:6119080-6119099 Msa0532100:five_prime_UTR 5.0%
!!! TATAAATAGTTTTAATATAA+CGG + chr4_1:6123840-6123859 Msa0532100:intron 5.0%
TGAGGATGAGCGGCAAAGTA+GGG + chr4_1:6119463-6119482 Msa0532100:exon 50.0%
ACAACAGAACCAAGGTCACG+TGG + chr4_1:6119902-6119921 Msa0532100:CDS 50.0%
CAACAGAACCAAGGTCACGT+GGG + chr4_1:6119903-6119922 Msa0532100:CDS 50.0%
! ACTGGTAGTGACCGATATGC+TGG + chr4_1:6119968-6119987 Msa0532100:CDS 50.0%
AATGGAACGCCTGCTTATGG+AGG + chr4_1:6120334-6120353 Msa0532100:CDS 50.0%
TAAACAGGCAGCCACCATCT+TGG + chr4_1:6120398-6120417 Msa0532100:CDS 50.0%
CAGCCATTGACACTTGACCT+GGG - chr4_1:6121009-6121028 None:intergenic 50.0%
TCAGCCATTGACACTTGACC+TGG - chr4_1:6121010-6121029 None:intergenic 50.0%
AGATTTAGGCACGGATGCCT+TGG - chr4_1:6121059-6121078 None:intergenic 50.0%
!! AATGCCACTGTTTCTGGAGC+CGG + chr4_1:6122207-6122226 Msa0532100:CDS 50.0%
GTCCTCAGATGCCAAGTATG+TGG + chr4_1:6122302-6122321 Msa0532100:intron 50.0%
!! TGAACCCTCTGAAACTGCTC+AGG + chr4_1:6122528-6122547 Msa0532100:CDS 50.0%
TGGAGAAGGGAGATAGGTTC+TGG - chr4_1:6122654-6122673 None:intergenic 50.0%
CCATCCCCTAGCTTATTACG+CGG - chr4_1:6123004-6123023 None:intergenic 50.0%
CAGAGATCACAACTGTCGTG+TGG + chr4_1:6123498-6123517 Msa0532100:intron 50.0%
CGTTGAAGCCAACAGAGCAT+TGG - chr4_1:6123642-6123661 None:intergenic 50.0%
AACGGTTCAAACACCAAGGG+AGG + chr4_1:6123658-6123677 Msa0532100:CDS 50.0%
GAGTATGGGATATCCTCCCT+TGG - chr4_1:6123674-6123693 None:intergenic 50.0%
GTAACAGGGAAGGGTGAGTA+TGG - chr4_1:6123689-6123708 None:intergenic 50.0%
! GCAGGCATTGCTTGTGTAAC+AGG - chr4_1:6123704-6123723 None:intergenic 50.0%
! TTGCATTCCCTTAGCGGATG+TGG - chr4_1:6123981-6124000 None:intergenic 50.0%
TACGGGGATGCGTCGTTTAT+TGG + chr4_1:6124071-6124090 Msa0532100:intron 50.0%
ATTACCAGGATAGCACCTCC+AGG + chr4_1:6124506-6124525 Msa0532100:intron 50.0%
TTACCAGGATAGCACCTCCA+GGG + chr4_1:6124507-6124526 Msa0532100:intron 50.0%
GCTGAAGGATAGAGTGGTCT+AGG + chr4_1:6124590-6124609 Msa0532100:intron 50.0%
CAACAATCTTTGCCTGGTGC+TGG + chr4_1:6125137-6125156 Msa0532100:CDS 50.0%
TTGAGGAAGTGAAGGTCCAG+TGG - chr4_1:6125168-6125187 None:intergenic 50.0%
!! GCAAGGTGTTGAGGAAGTGA+AGG - chr4_1:6125176-6125195 None:intergenic 50.0%
AAAGGTCCCAGCTGTGAGTA+CGG - chr4_1:6125206-6125225 None:intergenic 50.0%
! GGCATGTAGGTATAGCTCTG+AGG - chr4_1:6125257-6125276 None:intergenic 50.0%
CTGAAATGCCGATGGCATGT+AGG - chr4_1:6125270-6125289 None:intergenic 50.0%
AAAGCCTGCTGAAATGCCGA+TGG - chr4_1:6125278-6125297 None:intergenic 50.0%
! GCATTTCAGCAGGCTTTTGC+TGG + chr4_1:6125281-6125300 Msa0532100:CDS 50.0%
TAGCACCTACCACCAATCTC+TGG + chr4_1:6125307-6125326 Msa0532100:CDS 50.0%
GATGGTATAGCAGCAGACTG+AGG - chr4_1:6125380-6125399 None:intergenic 50.0%
CAGTCTGCTGCTATACCATC+TGG + chr4_1:6125380-6125399 Msa0532100:CDS 50.0%
GCCCCTACTAGTACAACCAT+TGG + chr4_1:6125464-6125483 Msa0532100:CDS 50.0%
AAGCTGTAATACGTGCTGGG+AGG - chr4_1:6125908-6125927 None:intergenic 50.0%
CTGGAAGCTGTAATACGTGC+TGG - chr4_1:6125912-6125931 None:intergenic 50.0%
CAGCACGTATTACAGCTTCC+AGG + chr4_1:6125910-6125929 Msa0532100:CDS 50.0%
!! TGGCTTTGTCGAAATGCACC+TGG - chr4_1:6125956-6125975 None:intergenic 50.0%
AACATCAGCAGCAGAACCCT+AGG + chr4_1:6126053-6126072 Msa0532100:CDS 50.0%
ACATCAGCAGCAGAACCCTA+GGG + chr4_1:6126054-6126073 Msa0532100:CDS 50.0%
!! CTGCTTAGGTGGTTGGCTTT+GGG - chr4_1:6126098-6126117 None:intergenic 50.0%
!! ACTGCTTAGGTGGTTGGCTT+TGG - chr4_1:6126099-6126118 None:intergenic 50.0%
TGTTGTTGGGACTGCTTAGG+TGG - chr4_1:6126109-6126128 None:intergenic 50.0%
CAAGACCCTTAAAAACCGGG+AGG - chr4_1:6126163-6126182 None:intergenic 50.0%
! TGGGAACGCCTCGTATTGAT+TGG - chr4_1:6126211-6126230 None:intergenic 50.0%
! ATCAATACGAGGCGTTCCCA+CGG + chr4_1:6126211-6126230 Msa0532100:three_prime_UTR 50.0%
GGTCTCTTCGGACCAAACAA+TGG - chr4_1:6126253-6126272 None:intergenic 50.0%
TGGTCCGAAGAGACCCAATA+TGG + chr4_1:6126258-6126277 Msa0532100:three_prime_UTR 50.0%
GAACCCTAACTCGAGGGGAT+CGG + chr4_1:6119438-6119457 Msa0532100:five_prime_UTR 55.0%
ACTCCGATCCCCTCGAGTTA+GGG - chr4_1:6119444-6119463 None:intergenic 55.0%
GTGAGGATGAGCGGCAAAGT+AGG + chr4_1:6119462-6119481 Msa0532100:exon 55.0%
GAGGATGAGCGGCAAAGTAG+GGG + chr4_1:6119464-6119483 Msa0532100:exon 55.0%
AGGATGAGCGGCAAAGTAGG+GGG + chr4_1:6119465-6119484 Msa0532100:exon 55.0%
GGCAAAGTAGGGGGACAGAA+AGG + chr4_1:6119474-6119493 Msa0532100:CDS 55.0%
ATCGTTGTCGGGTATACCGG+CGG + chr4_1:6119506-6119525 Msa0532100:CDS 55.0%
GTAGTGACCGATATGCTGGC+CGG + chr4_1:6119972-6119991 Msa0532100:CDS 55.0%
TAGTGACCGATATGCTGGCC+GGG + chr4_1:6119973-6119992 Msa0532100:CDS 55.0%
GAGCCCAGGTCAAGTGTCAA+TGG + chr4_1:6121003-6121022 Msa0532100:CDS 55.0%
TGTCAAGATGGGTAGGCCAC+AGG + chr4_1:6121033-6121052 Msa0532100:CDS 55.0%
AAGTTGTGATGCGAGGCTGC+TGG - chr4_1:6121121-6121140 None:intergenic 55.0%
! GTTGGTGGGTGCTCAACAGA+AGG - chr4_1:6121250-6121269 None:intergenic 55.0%
TGAGCAAGGGACAGAACCAG+AGG + chr4_1:6122092-6122111 Msa0532100:CDS 55.0%
!! ATGCCACTGTTTCTGGAGCC+GGG + chr4_1:6122208-6122227 Msa0532100:CDS 55.0%
GAGCCGGGACACATTCATCT+AGG + chr4_1:6122223-6122242 Msa0532100:CDS 55.0%
GGGCCTAGATGAATGTGTCC+CGG - chr4_1:6122229-6122248 None:intergenic 55.0%
CCGCGTAATAAGCTAGGGGA+TGG + chr4_1:6123001-6123020 Msa0532100:intron 55.0%
TACCAGGATAGCACCTCCAG+GGG + chr4_1:6124508-6124527 Msa0532100:intron 55.0%
!! GGATGCACAGCAAGGTGTTG+AGG - chr4_1:6125185-6125204 None:intergenic 55.0%
GTGAGTACGGATGCACAGCA+AGG - chr4_1:6125193-6125212 None:intergenic 55.0%
TGTGCATCCGTACTCACAGC+TGG + chr4_1:6125196-6125215 Msa0532100:CDS 55.0%
GTGCATCCGTACTCACAGCT+GGG + chr4_1:6125197-6125216 Msa0532100:CDS 55.0%
CATGCCATCGGCATTTCAGC+AGG + chr4_1:6125271-6125290 Msa0532100:CDS 55.0%
CTACCACCAATCTCTGGCAG+CGG + chr4_1:6125313-6125332 Msa0532100:CDS 55.0%
GGAAGTTCCACCAGCATTCC+TGG + chr4_1:6125413-6125432 Msa0532100:CDS 55.0%
AGTTCCACCAGCATTCCTGG+TGG + chr4_1:6125416-6125435 Msa0532100:CDS 55.0%
GTTTCCACCAGGAATGCTGG+TGG - chr4_1:6125423-6125442 None:intergenic 55.0%
!! GGGGCAGCTGATGGATTCAA+AGG - chr4_1:6125449-6125468 None:intergenic 55.0%
GTACTAGTAGGGGCAGCTGA+TGG - chr4_1:6125458-6125477 None:intergenic 55.0%
ATGCAAGGCCAGTGGTGGTT+AGG + chr4_1:6125741-6125760 Msa0532100:intron 55.0%
GGTGCAAAATGCTGCTGCGA+TGG - chr4_1:6125983-6126002 None:intergenic 55.0%
! CAGCAGCATTTTGCACCGCA+CGG + chr4_1:6125986-6126005 Msa0532100:CDS 55.0%
! AGCAGCATTTTGCACCGCAC+GGG + chr4_1:6125987-6126006 Msa0532100:CDS 55.0%
GTTGGGACTGCTTAGGTGGT+TGG - chr4_1:6126105-6126124 None:intergenic 55.0%
CCGGCCATATTGGGTCTCTT+CGG - chr4_1:6126265-6126284 None:intergenic 55.0%
CCGAAGAGACCCAATATGGC+CGG + chr4_1:6126262-6126281 Msa0532100:three_prime_UTR 55.0%
TGCGGCTGAACCCTAACTCG+AGG + chr4_1:6119431-6119450 Msa0532100:five_prime_UTR 60.0%
GCGGCTGAACCCTAACTCGA+GGG + chr4_1:6119432-6119451 Msa0532100:five_prime_UTR 60.0%
CGGCTGAACCCTAACTCGAG+GGG + chr4_1:6119433-6119452 Msa0532100:five_prime_UTR 60.0%
CACTCCGATCCCCTCGAGTT+AGG - chr4_1:6119445-6119464 None:intergenic 60.0%
AACTCGAGGGGATCGGAGTG+AGG + chr4_1:6119445-6119464 Msa0532100:five_prime_UTR 60.0%
GGGATCGGAGTGAGGATGAG+CGG + chr4_1:6119453-6119472 Msa0532100:exon 60.0%
!! ACCATTTTCCGACTCGCCGC+CGG - chr4_1:6119525-6119544 None:intergenic 60.0%
AATATACCGAGTCGCGGCGG+CGG + chr4_1:6119935-6119954 Msa0532100:CDS 60.0%
AGTGACCGATATGCTGGCCG+GGG + chr4_1:6119974-6119993 Msa0532100:CDS 60.0%
AACTTGCATCACCGCCACCC+CGG - chr4_1:6119994-6120013 None:intergenic 60.0%
GTGGAGGAGCCTCCATAAGC+AGG - chr4_1:6120346-6120365 None:intergenic 60.0%
ACAGGCAGCCACCATCTTGG+AGG + chr4_1:6120401-6120420 Msa0532100:CDS 60.0%
GCAAGGGACAGAACCAGAGG+AGG + chr4_1:6122095-6122114 Msa0532100:CDS 60.0%
TGTCCCGGCTCCAGAAACAG+TGG - chr4_1:6122214-6122233 None:intergenic 60.0%
!! TTCCCCTGGAGGTGCTATCC+TGG - chr4_1:6124513-6124532 None:intergenic 60.0%
! CGCTGCCAGAGATTGGTGGT+AGG - chr4_1:6125315-6125334 None:intergenic 60.0%
!! GAAGCACCGCTGCCAGAGAT+TGG - chr4_1:6125322-6125341 None:intergenic 60.0%
GCAAGGAGATGCAAGGCCAG+TGG + chr4_1:6125733-6125752 Msa0532100:intron 60.0%
AGGAGATGCAAGGCCAGTGG+TGG + chr4_1:6125736-6125755 Msa0532100:intron 60.0%
CCAGGCCCTTGAACCCACAT+AGG - chr4_1:6125866-6125885 None:intergenic 60.0%
CCTATGTGGGTTCAAGGGCC+TGG + chr4_1:6125863-6125882 Msa0532100:CDS 60.0%
AATGCTGCTGCGATGGCTGC+TGG - chr4_1:6125976-6125995 None:intergenic 60.0%
!! CGGCAAGGGAAGCATCCCTA+GGG - chr4_1:6126072-6126091 None:intergenic 60.0%
CCTAGGGATGCTTCCCTTGC+CGG + chr4_1:6126070-6126089 Msa0532100:CDS 60.0%
!! TTGGCTTTGGGAGCCGGCAA+GGG - chr4_1:6126086-6126105 None:intergenic 60.0%
!! AGGTGGTTGGCTTTGGGAGC+CGG - chr4_1:6126092-6126111 None:intergenic 60.0%
!! ATGGGGGCACCGGCCATATT+GGG - chr4_1:6126274-6126293 None:intergenic 60.0%
! CTACTGTCACATGGGGGCAC+CGG - chr4_1:6126284-6126303 None:intergenic 60.0%
ACCGGCGGCGAGTCGGAAAA+TGG + chr4_1:6119521-6119540 Msa0532100:CDS 65.0%
GATGGGTAGGCCACAGGCCA+AGG + chr4_1:6121039-6121058 Msa0532100:CDS 65.0%
CCAGTGGCAACACCAGCACC+AGG - chr4_1:6125152-6125171 None:intergenic 65.0%
!! CCTGGTGCTGGTGTTGCCAC+TGG + chr4_1:6125149-6125168 Msa0532100:CDS 65.0%
GCACCGCTGCCAGAGATTGG+TGG - chr4_1:6125319-6125338 None:intergenic 65.0%
!! CCGGCAAGGGAAGCATCCCT+AGG - chr4_1:6126073-6126092 None:intergenic 65.0%
!! GTTGGCTTTGGGAGCCGGCA+AGG - chr4_1:6126087-6126106 None:intergenic 65.0%
!! CATGGGGGCACCGGCCATAT+TGG - chr4_1:6126275-6126294 None:intergenic 65.0%
CGGGTATACCGGCGGCGAGT+CGG + chr4_1:6119514-6119533 Msa0532100:CDS 70.0%
GACCGATATGCTGGCCGGGG+TGG + chr4_1:6119977-6119996 Msa0532100:CDS 70.0%
CGCCACCCCGGCCAGCATAT+CGG - chr4_1:6119982-6120001 None:intergenic 70.0%
CGATATGCTGGCCGGGGTGG+CGG + chr4_1:6119980-6119999 Msa0532100:CDS 70.0%
TCTGCATGGTCGGCGAGCCC+AGG + chr4_1:6120989-6121008 Msa0532100:CDS 70.0%
GGCACGGATGCCTTGGCCTG+TGG - chr4_1:6121052-6121071 None:intergenic 70.0%
ATACCGAGTCGCGGCGGCGG+TGG + chr4_1:6119938-6119957 Msa0532100:CDS 75.0%
! GGCGGCGGTGGTGGTAGGAC+TGG + chr4_1:6119950-6119969 Msa0532100:CDS 75.0%
! CCACCACCGCCGCCGCGACT+CGG - chr4_1:6119944-6119963 None:intergenic 80.0%
!! GTCGCGGCGGCGGTGGTGGT+AGG + chr4_1:6119945-6119964 Msa0532100:CDS 80.0%
! CCGAGTCGCGGCGGCGGTGG+TGG + chr4_1:6119941-6119960 Msa0532100:CDS 85.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 6119027 6126565 6119027 ID=Msa0532100;Name=Msa0532100
chr4_1 mRNA 6119027 6126565 6119027 ID=Msa0532100-mRNA-1;Parent=Msa0532100;Name=Msa0532100-mRNA-1;_AED=0.01;_eAED=0.01;_QI=441|1|0.9|1|1|1|10|415|863
chr4_1 exon 6119027 6119654 6119027 ID=Msa0532100-mRNA-1:exon:2120;Parent=Msa0532100-mRNA-1
chr4_1 exon 6119749 6119792 6119749 ID=Msa0532100-mRNA-1:exon:2121;Parent=Msa0532100-mRNA-1
chr4_1 exon 6119893 6120034 6119893 ID=Msa0532100-mRNA-1:exon:2122;Parent=Msa0532100-mRNA-1
chr4_1 exon 6120293 6120422 6120293 ID=Msa0532100-mRNA-1:exon:2123;Parent=Msa0532100-mRNA-1
chr4_1 exon 6120931 6121541 6120931 ID=Msa0532100-mRNA-1:exon:2124;Parent=Msa0532100-mRNA-1
chr4_1 exon 6122034 6122316 6122034 ID=Msa0532100-mRNA-1:exon:2125;Parent=Msa0532100-mRNA-1
chr4_1 exon 6122402 6122681 6122402 ID=Msa0532100-mRNA-1:exon:2126;Parent=Msa0532100-mRNA-1
chr4_1 exon 6123620 6123778 6123620 ID=Msa0532100-mRNA-1:exon:2127;Parent=Msa0532100-mRNA-1
chr4_1 exon 6125092 6125547 6125092 ID=Msa0532100-mRNA-1:exon:2128;Parent=Msa0532100-mRNA-1
chr4_1 exon 6125851 6126565 6125851 ID=Msa0532100-mRNA-1:exon:2129;Parent=Msa0532100-mRNA-1
chr4_1 five_prime_UTR 6119027 6119467 6119027 ID=Msa0532100-mRNA-1:five_prime_utr;Parent=Msa0532100-mRNA-1
chr4_1 CDS 6119468 6119654 6119468 ID=Msa0532100-mRNA-1:cds;Parent=Msa0532100-mRNA-1
chr4_1 CDS 6119749 6119792 6119749 ID=Msa0532100-mRNA-1:cds;Parent=Msa0532100-mRNA-1
chr4_1 CDS 6119893 6120034 6119893 ID=Msa0532100-mRNA-1:cds;Parent=Msa0532100-mRNA-1
chr4_1 CDS 6120293 6120422 6120293 ID=Msa0532100-mRNA-1:cds;Parent=Msa0532100-mRNA-1
chr4_1 CDS 6120931 6121541 6120931 ID=Msa0532100-mRNA-1:cds;Parent=Msa0532100-mRNA-1
chr4_1 CDS 6122034 6122316 6122034 ID=Msa0532100-mRNA-1:cds;Parent=Msa0532100-mRNA-1
chr4_1 CDS 6122402 6122681 6122402 ID=Msa0532100-mRNA-1:cds;Parent=Msa0532100-mRNA-1
chr4_1 CDS 6123620 6123778 6123620 ID=Msa0532100-mRNA-1:cds;Parent=Msa0532100-mRNA-1
chr4_1 CDS 6125092 6125547 6125092 ID=Msa0532100-mRNA-1:cds;Parent=Msa0532100-mRNA-1
chr4_1 CDS 6125851 6126150 6125851 ID=Msa0532100-mRNA-1:cds;Parent=Msa0532100-mRNA-1
chr4_1 three_prime_UTR 6126151 6126565 6126151 ID=Msa0532100-mRNA-1:three_prime_utr;Parent=Msa0532100-mRNA-1
Gene Sequence

>Msa0532100

ATGAGCGGCAAAGTAGGGGGACAGAAAGGTACATCATCATCGTTGTCGGGTATACCGGCGGCGAGTCGGAAAATGGTACAAAGCTTGAAAGAGATAGTTTCGAATATACCTGATAACGAGATCTATGCCACTCTCAAAGACTGTAACATGGACCCTAACGAAGCTGTTAGTCGTCTTCTTTCTCAAGATCCTTTTCATGAGGTTAAGAGCAAACGAGAAAAGAAAAAAGAGGGTAAGGATACAACAGAACCAAGGTCACGTGGGAGTAATTATAATATACCGAGTCGCGGCGGCGGTGGTGGTAGGACTGGTAGTGACCGATATGCTGGCCGGGGTGGCGGTGATGCAAGTTCGAACCAATTCAGTAATAATGACTATGGTGTCCAGCAGAGTAAACCCGTGTTTAAGAAAGAAAATGGAACGCCTGCTTATGGAGGCTCCTCCACGTCTTATGCATCTAGTGTGATGGACAATAATGTAAACAGGCAGCCACCATCTTGGAGTGATTCTGTTGGTGTCCATGACGGACTGTCTTCATCATCACATCATGGTGGATTGCAATCTGCATGGTCGGCGAGCCCAGGTCAAGTGTCAATGGCTGACATTGTCAAGATGGGTAGGCCACAGGCCAAGGCATCCGTGCCTAAATCTTCTGTCCACAGTGGGAATCATCAGAATGCTTTTTCAACTCCAGCAGCCTCGCATCACAACTTGAATGTTACTGAAGCAAATAATGAATGGCCTTCTATTGAACCCAATGTTCAACAGAGTGATGAATGGCCTTCTATTGACCCCAATGTTCAACAGAGTGATGAATGGCCTTCTGTTGAGCACCCACCAACAGTTGTTGTTGATGCCCATCCAAATTCTGAGTATTATACAAATACATCTAACTTGGGTGAAGCTAATAGACAACTGCAGAACCACGGAAATGAATTTGTAGCTGAAGACAGTTCTGTTGAGGATGAGAATCCTGTTGATGTTGGATCTGCTTCTATACCTGCTAAAATTATATCTGATGATAATCCAGGAACTGCTTCTGGATATGATGATAATTTGTACAAGGACATAAATTCTTACCAGTCTCATCGACATCCTTTTGATGACAACGAAGCTGAAAATGGTGTTTCATCAGTGGCTACAAACTTAGAGCAGCTAAATTTACACACAGATGAGCAAGGGACAGAACCAGAGGAGGACAATTCTGATGTACTTATTCCAAATCACCTACAACTCCATACTCCAGAGTGTTTTAGTCTGAGCTTTGGAAGTTTTGGACCAAAACAAAATGCCACTGTTTCTGGAGCCGGGACACATTCATCTAGGCCCTTACAAAGTAACTTGGAGGAGACTTCTGGAGCTACTGATGTTTCAGCAATTGGGTCCTCAGATGCCAAAAATCCCGACTATTATGGGGATGAGCATATTGCTACTACCTCAGATGGCAATATATCCCACATAACTGGTGTGGATGCTAGGACTTATGAACATTCTTCCATTTCACAACCAGAGGCTTTAAAGTCTGAACCCTCTGAAACTGCTCAGGAAAATCAATATTCATTTCCTTCATCTTCGCATGAGTTTACATATGAAAATGCCCAACAACCAGAAGTTGCATATCCTCATTCACAAGCAAGCTCACAGATCCAGAACCTATCTCCCTTCTCCAGTGTAATGGCATATACAAATTCTTTGCCCAATGCTCTGTTGGCTTCAACGGTTCAAACACCAAGGGAGGATATCCCATACTCACCCTTCCCTGTTACACAAGCAATGCCTGCAAAATATAGCAACATGGCTTCTTCAATTGGTGGTTCCACGATAAACATGTCAGAGGCTTTAAGGGCAAACAGCATTTCGACGCCTCAAGCTCAACCTAATCAACAATCTTTGCCTGGTGCTGGTGTTGCCACTGGACCTTCACTTCCTCAACACCTTGCTGTGCATCCGTACTCACAGCTGGGACCTTTTGCTAATATGATAAGTTATCCGTTCATGCCTCAGAGCTATACCTACATGCCATCGGCATTTCAGCAGGCTTTTGCTGGAAATAGCACCTACCACCAATCTCTGGCAGCGGTGCTTCCACAATATAAAAATAGCATTTCTGTCAGCAGCTTGCCTCAGTCTGCTGCTATACCATCTGGATATGGTTTTGGAAGTTCCACCAGCATTCCTGGTGGAAACTATCCTTTGAATCCATCAGCTGCCCCTACTAGTACAACCATTGGATATGATGACGTGATAAACTCCCAGTATAAGGATAACAATCATATGATTTCACTTCAGCAGAATGAGAACAATCCTATGTGGGTTCAAGGGCCTGGTTCTCGAACAATGTCAGTTCCTCCCAGCACGTATTACAGCTTCCAGGGACAGAATCAACAACAACAACCAGGTGCATTTCGACAAAGCCAGCAGCCATCGCAGCAGCATTTTGCACCGCACGGGTACCCTAATAATTTCTACCATTCTCAGAGTGGGATTTCTCTAGAACATCAGCAGCAGAACCCTAGGGATGCTTCCCTTGCCGGCTCCCAAAGCCAACCACCTAAGCAGTCCCAACAACAATTGTGGCAAAACAGCTACTAA
Protein sequence

>Msa0532100

MSGKVGGQKGTSSSLSGIPAASRKMVQSLKEIVSNIPDNEIYATLKDCNMDPNEAVSRLLSQDPFHEVKSKREKKKEGKDTTEPRSRGSNYNIPSRGGGGGRTGSDRYAGRGGGDASSNQFSNNDYGVQQSKPVFKKENGTPAYGGSSTSYASSVMDNNVNRQPPSWSDSVGVHDGLSSSSHHGGLQSAWSASPGQVSMADIVKMGRPQAKASVPKSSVHSGNHQNAFSTPAASHHNLNVTEANNEWPSIEPNVQQSDEWPSIDPNVQQSDEWPSVEHPPTVVVDAHPNSEYYTNTSNLGEANRQLQNHGNEFVAEDSSVEDENPVDVGSASIPAKIISDDNPGTASGYDDNLYKDINSYQSHRHPFDDNEAENGVSSVATNLEQLNLHTDEQGTEPEEDNSDVLIPNHLQLHTPECFSLSFGSFGPKQNATVSGAGTHSSRPLQSNLEETSGATDVSAIGSSDAKNPDYYGDEHIATTSDGNISHITGVDARTYEHSSISQPEALKSEPSETAQENQYSFPSSSHEFTYENAQQPEVAYPHSQASSQIQNLSPFSSVMAYTNSLPNALLASTVQTPREDIPYSPFPVTQAMPAKYSNMASSIGGSTINMSEALRANSISTPQAQPNQQSLPGAGVATGPSLPQHLAVHPYSQLGPFANMISYPFMPQSYTYMPSAFQQAFAGNSTYHQSLAAVLPQYKNSISVSSLPQSAAIPSGYGFGSSTSIPGGNYPLNPSAAPTSTTIGYDDVINSQYKDNNHMISLQQNENNPMWVQGPGSRTMSVPPSTYYSFQGQNQQQQPGAFRQSQQPSQQHFAPHGYPNNFYHSQSGISLEHQQQNPRDASLAGSQSQPPKQSQQQLWQNSY*