Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0688110 | XP_013456230.1 | 97.449 | 588 | 15 | 0 | 1 | 588 | 1 | 588 | 0.0 | 1195 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0688110 | sp|Q9LXU9|IRKI_ARATH | 51.946 | 591 | 218 | 15 | 24 | 588 | 12 | 562 | 0.0 | 563 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0688110 | A0A072ULJ6 | 97.449 | 588 | 15 | 0 | 1 | 588 | 1 | 588 | 0.0 | 1195 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006050 | Msa0688110 | 0.835193 | 1.935354e-56 | -8.615850e-47 |
Msa0006700 | Msa0688110 | 0.814508 | 1.486427e-51 | -8.615850e-47 |
Msa0012780 | Msa0688110 | -0.805092 | 1.577425e-49 | -8.615850e-47 |
Msa0012820 | Msa0688110 | -0.801489 | 8.790562e-49 | -8.615850e-47 |
Msa0014410 | Msa0688110 | 0.818692 | 1.716782e-52 | -8.615850e-47 |
Msa0020630 | Msa0688110 | 0.859171 | 4.973219e-63 | -8.615850e-47 |
Msa0028950 | Msa0688110 | 0.804495 | 2.102189e-49 | -8.615850e-47 |
Msa0038350 | Msa0688110 | -0.837748 | 4.328688e-57 | -8.615850e-47 |
Msa0040410 | Msa0688110 | 0.821337 | 4.259485e-53 | -8.615850e-47 |
Msa0040550 | Msa0688110 | -0.827460 | 1.545148e-54 | -8.615850e-47 |
Msa0054760 | Msa0688110 | 0.820704 | 5.958295e-53 | -8.615850e-47 |
Msa0064550 | Msa0688110 | 0.813098 | 3.039726e-51 | -8.615850e-47 |
Msa0068410 | Msa0688110 | 0.819310 | 1.241896e-52 | -8.615850e-47 |
Msa0070740 | Msa0688110 | 0.826042 | 3.369290e-54 | -8.615850e-47 |
Msa0084630 | Msa0688110 | 0.800405 | 1.463921e-48 | -8.615850e-47 |
Msa0090040 | Msa0688110 | -0.836589 | 8.565641e-57 | -8.615850e-47 |
Msa0094670 | Msa0688110 | 0.802486 | 5.484622e-49 | -8.615850e-47 |
Msa0108070 | Msa0688110 | 0.823866 | 1.099814e-53 | -8.615850e-47 |
Msa0109490 | Msa0688110 | 0.803328 | 3.673223e-49 | -8.615850e-47 |
Msa0114240 | Msa0688110 | 0.809324 | 2.001920e-50 | -8.615850e-47 |
Msa0114250 | Msa0688110 | 0.830389 | 3.018946e-55 | -8.615850e-47 |
Msa0604000 | Msa0688110 | 0.867823 | 1.030068e-65 | -8.615850e-47 |
Msa0604700 | Msa0688110 | 0.801232 | 9.921162e-49 | -8.615850e-47 |
Msa0605250 | Msa0688110 | 0.828254 | 9.959543e-55 | -8.615850e-47 |
Msa0610810 | Msa0688110 | 0.806946 | 6.425318e-50 | -8.615850e-47 |
Msa0622250 | Msa0688110 | 0.815141 | 1.076183e-51 | -8.615850e-47 |
Msa0627050 | Msa0688110 | 0.851175 | 1.052770e-60 | -8.615850e-47 |
Msa0629500 | Msa0688110 | 0.806695 | 7.258767e-50 | -8.615850e-47 |
Msa0629980 | Msa0688110 | 0.811943 | 5.436530e-51 | -8.615850e-47 |
Msa0646340 | Msa0688110 | 0.831240 | 1.867036e-55 | -8.615850e-47 |
Msa0649310 | Msa0688110 | 0.849101 | 4.012524e-60 | -8.615850e-47 |
Msa0650360 | Msa0688110 | 0.803221 | 3.865992e-49 | -8.615850e-47 |
Msa0651310 | Msa0688110 | 0.803328 | 3.674361e-49 | -8.615850e-47 |
Msa0657860 | Msa0688110 | 0.804992 | 1.655328e-49 | -8.615850e-47 |
Msa0660880 | Msa0688110 | -0.830551 | 2.756062e-55 | -8.615850e-47 |
Msa0668090 | Msa0688110 | 0.806283 | 8.869337e-50 | -8.615850e-47 |
Msa0669990 | Msa0688110 | 0.819937 | 8.933036e-53 | -8.615850e-47 |
Msa0675010 | Msa0688110 | 0.831868 | 1.308123e-55 | -8.615850e-47 |
Msa0675790 | Msa0688110 | 0.810136 | 1.338959e-50 | -8.615850e-47 |
Msa0685890 | Msa0688110 | 0.831186 | 1.925396e-55 | -8.615850e-47 |
Msa0688110 | Msa0701840 | -0.823336 | 1.463289e-53 | -8.615850e-47 |
Msa0688110 | Msa0716740 | -0.836135 | 1.117154e-56 | -8.615850e-47 |
Msa0688110 | Msa0727300 | 0.809143 | 2.188577e-50 | -8.615850e-47 |
Msa0688110 | Msa0730180 | 0.801997 | 6.914598e-49 | -8.615850e-47 |
Msa0688110 | Msa0748330 | 0.807320 | 5.353420e-50 | -8.615850e-47 |
Msa0688110 | Msa0749150 | 0.800733 | 1.255060e-48 | -8.615850e-47 |
Msa0688110 | Msa0752580 | 0.810704 | 1.009920e-50 | -8.615850e-47 |
Msa0688110 | Msa0754500 | 0.805574 | 1.250008e-49 | -8.615850e-47 |
Msa0688110 | Msa0757990 | -0.813697 | 2.244457e-51 | -8.615850e-47 |
Msa0688110 | Msa0761640 | 0.841225 | 5.407517e-58 | -8.615850e-47 |
Msa0688110 | Msa0766030 | 0.801208 | 1.003533e-48 | -8.615850e-47 |
Msa0688110 | Msa0770430 | 0.813694 | 2.248712e-51 | -8.615850e-47 |
Msa0688110 | Msa0775580 | 0.814982 | 1.167402e-51 | -8.615850e-47 |
Msa0688110 | Msa0780140 | 0.803225 | 3.858973e-49 | -8.615850e-47 |
Msa0688110 | Msa0792510 | 0.807591 | 4.689972e-50 | -8.615850e-47 |
Msa0688110 | Msa0799290 | -0.823711 | 1.195410e-53 | -8.615850e-47 |
Msa0688110 | Msa0806720 | 0.817122 | 3.883374e-52 | -8.615850e-47 |
Msa0688110 | Msa0806760 | 0.824999 | 5.951467e-54 | -8.615850e-47 |
Msa0688110 | Msa0811000 | 0.804505 | 2.091750e-49 | -8.615850e-47 |
Msa0688110 | Msa0811510 | 0.821872 | 3.205211e-53 | -8.615850e-47 |
Msa0688110 | Msa0812970 | 0.845631 | 3.600638e-59 | -8.615850e-47 |
Msa0688110 | Msa0813030 | 0.834912 | 2.277975e-56 | -8.615850e-47 |
Msa0688110 | Msa0828570 | 0.842248 | 2.904078e-58 | -8.615850e-47 |
Msa0688110 | Msa0828900 | 0.803554 | 3.298806e-49 | -8.615850e-47 |
Msa0688110 | Msa0829430 | 0.803184 | 3.933887e-49 | -8.615850e-47 |
Msa0688110 | Msa0829570 | 0.803237 | 3.837458e-49 | -8.615850e-47 |
Msa0688110 | Msa0835510 | 0.801250 | 9.836985e-49 | -8.615850e-47 |
Msa0688110 | Msa0837430 | 0.807773 | 4.291895e-50 | -8.615850e-47 |
Msa0688110 | Msa0837510 | -0.824533 | 7.667603e-54 | -8.615850e-47 |
Msa0688110 | Msa0837990 | 0.822851 | 1.898507e-53 | -8.615850e-47 |
Msa0688110 | Msa0842050 | 0.861241 | 1.178396e-63 | -8.615850e-47 |
Msa0688110 | Msa0847200 | 0.815851 | 7.478317e-52 | -8.615850e-47 |
Msa0688110 | Msa0848360 | 0.811344 | 7.339131e-51 | -8.615850e-47 |
Msa0688110 | Msa0848380 | 0.810916 | 9.083305e-51 | -8.615850e-47 |
Msa0688110 | Msa0851740 | 0.820457 | 6.791066e-53 | -8.615850e-47 |
Msa0688110 | Msa0853480 | 0.802990 | 4.316498e-49 | -8.615850e-47 |
Msa0688110 | Msa0853500 | 0.834679 | 2.607608e-56 | -8.615850e-47 |
Msa0688110 | Msa0865990 | -0.807036 | 6.150777e-50 | -8.615850e-47 |
Msa0688110 | Msa0871470 | 0.845591 | 3.691139e-59 | -8.615850e-47 |
Msa0688110 | Msa0882700 | 0.800901 | 1.159796e-48 | -8.615850e-47 |
Msa0688110 | Msa0887000 | 0.801791 | 7.621709e-49 | -8.615850e-47 |
Msa0688110 | Msa0899130 | 0.829085 | 6.271450e-55 | -8.615850e-47 |
Msa0688110 | Msa0899700 | 0.812111 | 4.998043e-51 | -8.615850e-47 |
Msa0688110 | Msa0902140 | 0.804544 | 2.053148e-49 | -8.615850e-47 |
Msa0688110 | Msa0904630 | 0.846023 | 2.818086e-59 | -8.615850e-47 |
Msa0688110 | Msa0911910 | 0.871312 | 7.522594e-67 | -8.615850e-47 |
Msa0688110 | Msa0931730 | 0.815469 | 9.096813e-52 | -8.615850e-47 |
Msa0688110 | Msa0936650 | 0.854132 | 1.508480e-61 | -8.615850e-47 |
Msa0688110 | Msa0936690 | 0.835180 | 1.949676e-56 | -8.615850e-47 |
Msa0688110 | Msa0938420 | 0.801903 | 7.228900e-49 | -8.615850e-47 |
Msa0688110 | Msa0944690 | 0.836430 | 9.403258e-57 | -8.615850e-47 |
Msa0688110 | Msa0945960 | 0.812720 | 3.677650e-51 | -8.615850e-47 |
Msa0688110 | Msa0964680 | 0.826675 | 2.381266e-54 | -8.615850e-47 |
Msa0688110 | Msa0968780 | 0.805843 | 1.097765e-49 | -8.615850e-47 |
Msa0688110 | Msa0970050 | 0.844329 | 8.087963e-59 | -8.615850e-47 |
Msa0688110 | Msa0973890 | 0.829979 | 3.800373e-55 | -8.615850e-47 |
Msa0688110 | Msa0984000 | 0.852686 | 3.923650e-61 | -8.615850e-47 |
Msa0688110 | Msa1004210 | 0.831788 | 1.368840e-55 | -8.615850e-47 |
Msa0688110 | Msa1004260 | 0.818855 | 1.576488e-52 | -8.615850e-47 |
Msa0688110 | Msa1014350 | 0.837183 | 6.040250e-57 | -8.615850e-47 |
Msa0688110 | Msa1016670 | 0.813156 | 2.951487e-51 | -8.615850e-47 |
Msa0688110 | Msa1029430 | 0.823588 | 1.277744e-53 | -8.615850e-47 |
Msa0688110 | Msa1036250 | 0.814562 | 1.445960e-51 | -8.615850e-47 |
Msa0688110 | Msa1036350 | 0.805757 | 1.144282e-49 | -8.615850e-47 |
Msa0688110 | Msa1038820 | 0.801079 | 1.066256e-48 | -8.615850e-47 |
Msa0688110 | Msa1046610 | 0.828025 | 1.130613e-54 | -8.615850e-47 |
Msa0688110 | Msa1055360 | 0.838009 | 3.708745e-57 | -8.615850e-47 |
Msa0688110 | Msa1063920 | 0.823396 | 1.417014e-53 | -8.615850e-47 |
Msa0688110 | Msa1068290 | 0.816424 | 5.568877e-52 | -8.615850e-47 |
Msa0688110 | Msa1075340 | 0.803006 | 4.282694e-49 | -8.615850e-47 |
Msa0688110 | Msa1076520 | 0.801018 | 1.097494e-48 | -8.615850e-47 |
Msa0688110 | Msa1076680 | 0.800958 | 1.128955e-48 | -8.615850e-47 |
Msa0688110 | Msa1081850 | 0.810975 | 8.823877e-51 | -8.615850e-47 |
Msa0688110 | Msa1082150 | 0.856410 | 3.278097e-62 | -8.615850e-47 |
Msa0688110 | Msa1093390 | 0.850474 | 1.659471e-60 | -8.615850e-47 |
Msa0688110 | Msa1108140 | 0.824933 | 6.170716e-54 | -8.615850e-47 |
Msa0688110 | Msa1113210 | 0.823631 | 1.248514e-53 | -8.615850e-47 |
Msa0688110 | Msa1118980 | 0.800768 | 1.234210e-48 | -8.615850e-47 |
Msa0688110 | Msa1122720 | 0.809765 | 1.609603e-50 | -8.615850e-47 |
Msa0688110 | Msa1131900 | 0.830742 | 2.473730e-55 | -8.615850e-47 |
Msa0688110 | Msa1133660 | 0.819606 | 1.063294e-52 | -8.615850e-47 |
Msa0688110 | Msa1138450 | 0.825813 | 3.820798e-54 | -8.615850e-47 |
Msa0688110 | Msa1140010 | 0.800355 | 1.498250e-48 | -8.615850e-47 |
Msa0688110 | Msa1144730 | 0.818291 | 2.116349e-52 | -8.615850e-47 |
Msa0688110 | Msa1151820 | 0.843273 | 1.551187e-58 | -8.615850e-47 |
Msa0688110 | Msa1168960 | -0.807797 | 4.241824e-50 | -8.615850e-47 |
Msa0688110 | Msa1173380 | 0.833866 | 4.169799e-56 | -8.615850e-47 |
Msa0688110 | Msa1182800 | 0.882806 | 7.649761e-71 | -8.615850e-47 |
Msa0688110 | Msa1182830 | 0.875184 | 3.762312e-68 | -8.615850e-47 |
Msa0688110 | Msa1183390 | 0.815985 | 6.980983e-52 | -8.615850e-47 |
Msa0688110 | Msa1184010 | 0.806831 | 6.794267e-50 | -8.615850e-47 |
Msa0688110 | Msa1192150 | 0.848233 | 6.985563e-60 | -8.615850e-47 |
Msa0688110 | Msa1193400 | 0.811066 | 8.429685e-51 | -8.615850e-47 |
Msa0688110 | Msa1193430 | 0.806569 | 7.719902e-50 | -8.615850e-47 |
Msa0688110 | Msa1204430 | 0.831206 | 1.903858e-55 | -8.615850e-47 |
Msa0688110 | Msa1204980 | -0.815435 | 9.260630e-52 | -8.615850e-47 |
Msa0688110 | Msa1205010 | -0.818389 | 2.011108e-52 | -8.615850e-47 |
Msa0688110 | Msa1206760 | 0.821821 | 3.292420e-53 | -8.615850e-47 |
Msa0688110 | Msa1207480 | -0.831530 | 1.584659e-55 | -8.615850e-47 |
Msa0688110 | Msa1209790 | 0.802037 | 6.783896e-49 | -8.615850e-47 |
Msa0688110 | Msa1212740 | 0.811356 | 7.292728e-51 | -8.615850e-47 |
Msa0688110 | Msa1214900 | 0.805592 | 1.239077e-49 | -8.615850e-47 |
Msa0688110 | Msa1219780 | -0.801229 | 9.934845e-49 | -8.615850e-47 |
Msa0688110 | Msa1222030 | -0.826897 | 2.107631e-54 | -8.615850e-47 |
Msa0688110 | Msa1222580 | 0.824301 | 8.693352e-54 | -8.615850e-47 |
Msa0688110 | Msa1223460 | 0.823923 | 1.066312e-53 | -8.615850e-47 |
Msa0688110 | Msa1225820 | 0.810312 | 1.226959e-50 | -8.615850e-47 |
Msa0688110 | Msa1226600 | 0.802236 | 6.175475e-49 | -8.615850e-47 |
Msa0688110 | Msa1233770 | 0.864830 | 9.164772e-65 | -8.615850e-47 |
Msa0688110 | Msa1243730 | 0.817558 | 3.098189e-52 | -8.615850e-47 |
Msa0688110 | Msa1256540 | -0.819443 | 1.158212e-52 | -8.615850e-47 |
Msa0688110 | Msa1260760 | 0.810191 | 1.303122e-50 | -8.615850e-47 |
Msa0688110 | Msa1264560 | 0.822651 | 2.113967e-53 | -8.615850e-47 |
Msa0688110 | Msa1266710 | -0.813571 | 2.392406e-51 | -8.615850e-47 |
Msa0688110 | Msa1272950 | 0.833093 | 6.500961e-56 | -8.615850e-47 |
Msa0688110 | Msa1276080 | 0.853481 | 2.322991e-61 | -8.615850e-47 |
Msa0688110 | Msa1293050 | 0.804721 | 1.885178e-49 | -8.615850e-47 |
Msa0688110 | Msa1296650 | 0.837336 | 5.521219e-57 | -8.615850e-47 |
Msa0688110 | Msa1296960 | -0.822851 | 1.898770e-53 | -8.615850e-47 |
Msa0688110 | Msa1297720 | 0.801142 | 1.035080e-48 | -8.615850e-47 |
Msa0688110 | Msa1298290 | 0.805151 | 1.533152e-49 | -8.615850e-47 |
Msa0688110 | Msa1309360 | 0.817963 | 2.510299e-52 | -8.615850e-47 |
Msa0688110 | Msa1317710 | 0.820444 | 6.835812e-53 | -8.615850e-47 |
Msa0688110 | Msa1326000 | 0.840539 | 8.184256e-58 | -8.615850e-47 |
Msa0688110 | Msa1326400 | 0.818564 | 1.835449e-52 | -8.615850e-47 |
Msa0688110 | Msa1335970 | -0.812284 | 4.581111e-51 | -8.615850e-47 |
Msa0688110 | Msa1338590 | 0.818569 | 1.830922e-52 | -8.615850e-47 |
Msa0688110 | Msa1349810 | 0.840662 | 7.597357e-58 | -8.615850e-47 |
Msa0688110 | Msa1354090 | 0.811631 | 6.355383e-51 | -8.615850e-47 |
Msa0688110 | Msa1358340 | 0.817792 | 2.744481e-52 | -8.615850e-47 |
Msa0688110 | Msa1359620 | 0.814998 | 1.157631e-51 | -8.615850e-47 |
Msa0688110 | Msa1373950 | 0.811860 | 5.668221e-51 | -8.615850e-47 |
Msa0688110 | Msa1385900 | 0.802428 | 5.637603e-49 | -8.615850e-47 |
Msa0688110 | Msa1386020 | 0.812395 | 4.333023e-51 | -8.615850e-47 |
Msa0688110 | Msa1394900 | 0.811672 | 6.228379e-51 | -8.615850e-47 |
Msa0688110 | Msa1400700 | -0.811022 | 8.619483e-51 | -8.615850e-47 |
Msa0688110 | Msa1403700 | 0.812116 | 4.984352e-51 | -8.615850e-47 |
Msa0688110 | Msa1407210 | -0.812000 | 5.281931e-51 | -8.615850e-47 |
Msa0688110 | Msa1412520 | 0.827988 | 1.153932e-54 | -8.615850e-47 |
Msa0688110 | Msa1420520 | 0.801265 | 9.769910e-49 | -8.615850e-47 |
Msa0688110 | Msa1430760 | 0.830654 | 2.600163e-55 | -8.615850e-47 |
Msa0688110 | Msa1434660 | 0.837434 | 5.209650e-57 | -8.615850e-47 |
Msa0688110 | Msa1440220 | 0.812253 | 4.653381e-51 | -8.615850e-47 |
Msa0688110 | Msa1443550 | 0.830098 | 3.555738e-55 | -8.615850e-47 |
Msa0688110 | Msa1447160 | -0.844105 | 9.290696e-59 | -8.615850e-47 |
Msa0688110 | Msa1454290 | -0.801246 | 9.858473e-49 | -8.615850e-47 |
Msa0688110 | Msa1460310 | -0.842389 | 2.664555e-58 | -8.615850e-47 |
Msa0129790 | Msa0688110 | -0.812770 | 3.586468e-51 | -8.615850e-47 |
Msa0130760 | Msa0688110 | 0.809478 | 1.855198e-50 | -8.615850e-47 |
Msa0137120 | Msa0688110 | -0.834270 | 3.303553e-56 | -8.615850e-47 |
Msa0152740 | Msa0688110 | -0.807542 | 4.804004e-50 | -8.615850e-47 |
Msa0154240 | Msa0688110 | 0.848411 | 6.234536e-60 | -8.615850e-47 |
Msa0154270 | Msa0688110 | 0.832958 | 7.021867e-56 | -8.615850e-47 |
Msa0156650 | Msa0688110 | -0.809034 | 2.310130e-50 | -8.615850e-47 |
Msa0159750 | Msa0688110 | 0.856688 | 2.716408e-62 | -8.615850e-47 |
Msa0172370 | Msa0688110 | 0.804739 | 1.869291e-49 | -8.615850e-47 |
Msa0185640 | Msa0688110 | -0.828240 | 1.003362e-54 | -8.615850e-47 |
Msa0192710 | Msa0688110 | 0.804313 | 2.293916e-49 | -8.615850e-47 |
Msa0199740 | Msa0688110 | 0.858311 | 8.990129e-63 | -8.615850e-47 |
Msa0200950 | Msa0688110 | -0.820301 | 7.373081e-53 | -8.615850e-47 |
Msa0213080 | Msa0688110 | 0.806538 | 7.837013e-50 | -8.615850e-47 |
Msa0217470 | Msa0688110 | 0.822244 | 2.627834e-53 | -8.615850e-47 |
Msa0224370 | Msa0688110 | 0.829237 | 5.760502e-55 | -8.615850e-47 |
Msa0224400 | Msa0688110 | 0.814951 | 1.186063e-51 | -8.615850e-47 |
Msa0229140 | Msa0688110 | -0.822030 | 2.946418e-53 | -8.615850e-47 |
Msa0377280 | Msa0688110 | 0.836901 | 7.129986e-57 | -8.615850e-47 |
Msa0380430 | Msa0688110 | 0.810290 | 1.240900e-50 | -8.615850e-47 |
Msa0380520 | Msa0688110 | 0.806151 | 9.455844e-50 | -8.615850e-47 |
Msa0387970 | Msa0688110 | 0.800013 | 1.758522e-48 | -8.615850e-47 |
Msa0388260 | Msa0688110 | -0.805075 | 1.589920e-49 | -8.615850e-47 |
Msa0389060 | Msa0688110 | 0.880420 | 5.571808e-70 | -8.615850e-47 |
Msa0392050 | Msa0688110 | 0.816979 | 4.183365e-52 | -8.615850e-47 |
Msa0401340 | Msa0688110 | 0.838867 | 2.227635e-57 | -8.615850e-47 |
Msa0404690 | Msa0688110 | 0.844292 | 8.272847e-59 | -8.615850e-47 |
Msa0405250 | Msa0688110 | -0.827410 | 1.588748e-54 | -8.615850e-47 |
Msa0405660 | Msa0688110 | -0.805437 | 1.335532e-49 | -8.615850e-47 |
Msa0409820 | Msa0688110 | 0.814899 | 1.217622e-51 | -8.615850e-47 |
Msa0412540 | Msa0688110 | 0.805281 | 1.440089e-49 | -8.615850e-47 |
Msa0413740 | Msa0688110 | 0.804705 | 1.899851e-49 | -8.615850e-47 |
Msa0428850 | Msa0688110 | -0.800069 | 1.713186e-48 | -8.615850e-47 |
Msa0438630 | Msa0688110 | -0.800727 | 1.258557e-48 | -8.615850e-47 |
Msa0440310 | Msa0688110 | 0.807473 | 4.969083e-50 | -8.615850e-47 |
Msa0448120 | Msa0688110 | 0.845659 | 3.537422e-59 | -8.615850e-47 |
Msa0458790 | Msa0688110 | 0.829837 | 4.116394e-55 | -8.615850e-47 |
Msa0462590 | Msa0688110 | 0.800767 | 1.234941e-48 | -8.615850e-47 |
Msa0467920 | Msa0688110 | -0.829559 | 4.809825e-55 | -8.615850e-47 |
Msa0469950 | Msa0688110 | 0.817550 | 3.111852e-52 | -8.615850e-47 |
Msa0475740 | Msa0688110 | 0.812369 | 4.390111e-51 | -8.615850e-47 |
Msa0479230 | Msa0688110 | 0.802669 | 5.026767e-49 | -8.615850e-47 |
Msa0242290 | Msa0688110 | 0.848304 | 6.674796e-60 | -8.615850e-47 |
Msa0245870 | Msa0688110 | 0.850763 | 1.375592e-60 | -8.615850e-47 |
Msa0258670 | Msa0688110 | -0.836278 | 1.027881e-56 | -8.615850e-47 |
Msa0258700 | Msa0688110 | -0.802128 | 6.499547e-49 | -8.615850e-47 |
Msa0264940 | Msa0688110 | -0.839375 | 1.644892e-57 | -8.615850e-47 |
Msa0265580 | Msa0688110 | 0.813558 | 2.409258e-51 | -8.615850e-47 |
Msa0272420 | Msa0688110 | 0.810573 | 1.077887e-50 | -8.615850e-47 |
Msa0288330 | Msa0688110 | 0.813418 | 2.586006e-51 | -8.615850e-47 |
Msa0296610 | Msa0688110 | 0.817736 | 2.824917e-52 | -8.615850e-47 |
Msa0302990 | Msa0688110 | -0.843458 | 1.383699e-58 | -8.615850e-47 |
Msa0303440 | Msa0688110 | 0.806688 | 7.285057e-50 | -8.615850e-47 |
Msa0308570 | Msa0688110 | 0.846663 | 1.885897e-59 | -8.615850e-47 |
Msa0326670 | Msa0688110 | 0.813241 | 2.827298e-51 | -8.615850e-47 |
Msa0333900 | Msa0688110 | 0.815693 | 8.110025e-52 | -8.615850e-47 |
Msa0334020 | Msa0688110 | 0.807827 | 4.178698e-50 | -8.615850e-47 |
Msa0334980 | Msa0688110 | 0.820713 | 5.931117e-53 | -8.615850e-47 |
Msa0335890 | Msa0688110 | -0.844974 | 5.421524e-59 | -8.615850e-47 |
Msa0342340 | Msa0688110 | -0.818641 | 1.763250e-52 | -8.615850e-47 |
Msa0344680 | Msa0688110 | 0.811384 | 7.193647e-51 | -8.615850e-47 |
Msa0354390 | Msa0688110 | 0.836652 | 8.251903e-57 | -8.615850e-47 |
Msa0487490 | Msa0688110 | 0.805471 | 1.313665e-49 | -8.615850e-47 |
Msa0505390 | Msa0688110 | 0.807104 | 5.949506e-50 | -8.615850e-47 |
Msa0514330 | Msa0688110 | -0.832581 | 8.709581e-56 | -8.615850e-47 |
Msa0524050 | Msa0688110 | 0.801767 | 7.707521e-49 | -8.615850e-47 |
Msa0525270 | Msa0688110 | 0.800852 | 1.186582e-48 | -8.615850e-47 |
Msa0525280 | Msa0688110 | 0.808585 | 2.881352e-50 | -8.615850e-47 |
Msa0526640 | Msa0688110 | -0.838883 | 2.206999e-57 | -8.615850e-47 |
Msa0530340 | Msa0688110 | 0.826757 | 2.277112e-54 | -8.615850e-47 |
Msa0530930 | Msa0688110 | 0.814466 | 1.518879e-51 | -8.615850e-47 |
Msa0531990 | Msa0688110 | -0.824131 | 9.531100e-54 | -8.615850e-47 |
Msa0532100 | Msa0688110 | -0.819113 | 1.377118e-52 | -8.615850e-47 |
Msa0545230 | Msa0688110 | 0.828335 | 9.519867e-55 | -8.615850e-47 |
Msa0565390 | Msa0688110 | -0.817909 | 2.582303e-52 | -8.615850e-47 |
Msa0587900 | Msa0688110 | 0.807975 | 3.887220e-50 | -8.615850e-47 |
Msa0589290 | Msa0688110 | 0.802944 | 4.410207e-49 | -8.615850e-47 |
Msa0589600 | Msa0688110 | 0.827142 | 1.842380e-54 | -8.615850e-47 |
Msa0589640 | Msa0688110 | 0.817154 | 3.820419e-52 | -8.615850e-47 |
Msa0600820 | Msa0688110 | 0.832053 | 1.177347e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0688110 | MtrunA17_Chr4g0033061 | 97.449 | 588 | 15 | 0 | 1 | 588 | 1 | 588 | 0.0 | 1195 |
Msa0688110 | MtrunA17_Chr2g0329091 | 69.118 | 612 | 140 | 18 | 1 | 586 | 1 | 589 | 0.0 | 786 |
Msa0688110 | MtrunA17_Chr8g0392321 | 38.889 | 324 | 176 | 4 | 265 | 584 | 150 | 455 | 1.38e-71 | 238 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0688110 | AT5G12900.1 | 51.946 | 591 | 218 | 15 | 24 | 588 | 12 | 562 | 0.0 | 563 |
Msa0688110 | AT1G12330.1 | 34.459 | 444 | 247 | 11 | 150 | 583 | 63 | 472 | 2.75e-69 | 233 |
Find 126 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGACGGTCAATGAATTT+TGG | 0.121316 | 4_4:-53371165 | None:intergenic |
TCTTCAGATTCTGCTCTATT+TGG | 0.170887 | 4_4:-53370577 | None:intergenic |
TGTTTCTCTGTTCTGTTTCA+TGG | 0.173434 | 4_4:+53369014 | Msa0688110:exon |
GCATTACCACTACTCTAAAT+TGG | 0.198308 | 4_4:+53371313 | Msa0688110:CDS |
TTTCTTCAATGTTGTTTATA+AGG | 0.223578 | 4_4:-53370981 | None:intergenic |
ACATGTTTCCTAGTTTATTT+AGG | 0.258740 | 4_4:-53371601 | None:intergenic |
TCTCGTCATTCGTTGCTCTT+AGG | 0.269047 | 4_4:+53371205 | Msa0688110:CDS |
TTGCTTGGACCCTGTGACCT+TGG | 0.298273 | 4_4:-53371495 | None:intergenic |
CAGAACTGCCTTTGAGTACT+TGG | 0.306166 | 4_4:-53371067 | None:intergenic |
ATGTTAAGGATAGGGTATTA+AGG | 0.314700 | 4_4:+53371547 | Msa0688110:CDS |
CTTACTCCTGTAGCTTTCAT+TGG | 0.318767 | 4_4:-53370332 | None:intergenic |
AACTACAAGACAGGAAATTA+AGG | 0.323447 | 4_4:+53369092 | Msa0688110:CDS |
GATTTATGAAAGCTTCAAAA+TGG | 0.324347 | 4_4:-53371092 | None:intergenic |
ACAAGAGCCGGTTACGGATT+TGG | 0.324635 | 4_4:-53370275 | None:intergenic |
AACTCACTAGTTATGATTGC+AGG | 0.324702 | 4_4:-53370409 | None:intergenic |
TTCTGAGATGCGATGTTCAT+TGG | 0.343847 | 4_4:+53370702 | Msa0688110:CDS |
AACAGAGAAACAGAACAAAA+TGG | 0.345493 | 4_4:-53369003 | None:intergenic |
TATTAATTATCACATAGATT+TGG | 0.345494 | 4_4:-53371643 | None:intergenic |
CCCAACTTTCAGATATTGTT+AGG | 0.351274 | 4_4:-53370120 | None:intergenic |
CGGGACATATGTGAGATTCT+TGG | 0.356352 | 4_4:-53370243 | None:intergenic |
AGTTGGGATGAAGGAGAGTC+AGG | 0.360043 | 4_4:+53370136 | Msa0688110:CDS |
TAAGAGAAGAAACAGTTTAG+AGG | 0.360943 | 4_4:+53370351 | Msa0688110:CDS |
CCACTACTCTAAATTGGATT+AGG | 0.362270 | 4_4:+53371319 | Msa0688110:CDS |
TTAGGCATTTCGTGTGGTTC+TGG | 0.364717 | 4_4:-53370102 | None:intergenic |
AGCTCTTAGTTCCACTGCTT+TGG | 0.367605 | 4_4:-53369124 | None:intergenic |
AACCTTTGATCATCGCTATA+TGG | 0.369774 | 4_4:+53371461 | Msa0688110:CDS |
ACCATGATCTTAACTTTGCT+TGG | 0.370606 | 4_4:-53371510 | None:intergenic |
GAATTTAGAGACAGCTTATA+CGG | 0.371940 | 4_4:-53371045 | None:intergenic |
TGCAGGGTTACATTTATTGC+AGG | 0.374680 | 4_4:-53370392 | None:intergenic |
ATTCTCACAGGTGTGAAAAC+AGG | 0.375466 | 4_4:-53369249 | None:intergenic |
CTCTAAATTGGATTAGGCCT+TGG | 0.377636 | 4_4:+53371325 | Msa0688110:CDS |
AAACCAGTGTACAAGATTAC+AGG | 0.381028 | 4_4:+53370170 | Msa0688110:CDS |
GCCTAACAATATCTGAAAGT+TGG | 0.386328 | 4_4:+53370119 | Msa0688110:CDS |
TGATTTCGTGGTTGTTTCCT+CGG | 0.394790 | 4_4:+53370524 | Msa0688110:CDS |
ATCCCTGTAATCTTGTACAC+TGG | 0.401675 | 4_4:-53370173 | None:intergenic |
CGTGGCAGGAACAACAATAT+TGG | 0.408732 | 4_4:-53370458 | None:intergenic |
CCTAACAATATCTGAAAGTT+GGG | 0.413549 | 4_4:+53370120 | Msa0688110:CDS |
ACGGATTTGGTGTCATCAAC+GGG | 0.414851 | 4_4:-53370262 | None:intergenic |
TAGTTCCACTGCTTTGGCTA+TGG | 0.416631 | 4_4:-53369118 | None:intergenic |
TTCCTAGTTTATTTAGGCTG+TGG | 0.418321 | 4_4:-53371595 | None:intergenic |
GTTAAGATCATGGTTAATCC+AGG | 0.427966 | 4_4:+53371519 | Msa0688110:CDS |
TAAGGTGTAAGGTCCTTTGC+AGG | 0.436843 | 4_4:+53371565 | Msa0688110:CDS |
GCTTCTTCAAGCTTTCTTTG+TGG | 0.438315 | 4_4:+53371356 | Msa0688110:CDS |
TCTGAGATGCGATGTTCATT+GGG | 0.440475 | 4_4:+53370703 | Msa0688110:CDS |
GATAAACCAAGTTCAAGAAA+AGG | 0.442732 | 4_4:+53370193 | Msa0688110:CDS |
GAGACAGAAGATGGAGTACT+TGG | 0.456731 | 4_4:+53370732 | Msa0688110:CDS |
AAAGCTTGAAGAAGCTGCTC+AGG | 0.463394 | 4_4:-53371348 | None:intergenic |
CTCCTGTAGCTTTCATTGGT+AGG | 0.467705 | 4_4:-53370328 | None:intergenic |
CTGGAATGAAGTACTGAGAA+AGG | 0.467976 | 4_4:+53371236 | Msa0688110:CDS |
GATGACACCAAATCCGTAAC+CGG | 0.470105 | 4_4:+53370268 | Msa0688110:CDS |
TACGGATTTGGTGTCATCAA+CGG | 0.471382 | 4_4:-53370263 | None:intergenic |
CAGAGAGGGAAATCAATTGA+TGG | 0.474699 | 4_4:+53370856 | Msa0688110:CDS |
GAATGAGGAAGTAATGATAG+AGG | 0.484289 | 4_4:+53370903 | Msa0688110:CDS |
ATAAACCAAGTTCAAGAAAA+GGG | 0.488864 | 4_4:+53370194 | Msa0688110:CDS |
GAATAGAGATGTGGCGTTGG+TGG | 0.489658 | 4_4:+53370675 | Msa0688110:CDS |
ATCATTACTTCCTCATTCAC+AGG | 0.490591 | 4_4:-53370898 | None:intergenic |
AGATATGAGTCCAAGGTCAC+AGG | 0.493415 | 4_4:+53371485 | Msa0688110:CDS |
ATATCTGAAAGTTGGGATGA+AGG | 0.496923 | 4_4:+53370127 | Msa0688110:CDS |
ATCCCTTGCCTGCGTCTGCA+TGG | 0.501502 | 4_4:-53370794 | None:intergenic |
ATTTGCACAAGAGCCGGTTA+CGG | 0.506731 | 4_4:-53370281 | None:intergenic |
AAATGCAATTCTCAAAGTCT+TGG | 0.511355 | 4_4:-53371125 | None:intergenic |
CAATATTGTTGTTCCTGCCA+CGG | 0.511774 | 4_4:+53370459 | Msa0688110:CDS |
GGATAGGGTATTAAGGTGTA+AGG | 0.513410 | 4_4:+53371554 | Msa0688110:CDS |
AGTCTGAAACGAAAAGCAAA+GGG | 0.516834 | 4_4:+53370500 | Msa0688110:CDS |
TATATGATTTGCACAAGAGC+CGG | 0.520360 | 4_4:-53370287 | None:intergenic |
GGGAGAGTTGAGACAGAAGA+TGG | 0.523009 | 4_4:+53370723 | Msa0688110:CDS |
AAAGCAAAGGGGTGATTTCG+TGG | 0.524133 | 4_4:+53370512 | Msa0688110:CDS |
ATGACGAGAATTTCGCTTGG+CGG | 0.524799 | 4_4:-53371191 | None:intergenic |
TGCAATCATAACTAGTGAGT+TGG | 0.525610 | 4_4:+53370411 | Msa0688110:CDS |
GACGAGTGGGAATCCGTGGC+AGG | 0.527984 | 4_4:-53370472 | None:intergenic |
TCACAGGTTCTCAAGGACAT+AGG | 0.529862 | 4_4:+53370604 | Msa0688110:CDS |
TTGCTCTTAGGAATTTGAGC+TGG | 0.530381 | 4_4:+53371217 | Msa0688110:CDS |
CCCTTAAAACTCCCAATGGT+GGG | 0.532372 | 4_4:-53371425 | None:intergenic |
CACCTACCAATGAAAGCTAC+AGG | 0.535955 | 4_4:+53370326 | Msa0688110:CDS |
ACCCTTAAAACTCCCAATGG+TGG | 0.537328 | 4_4:-53371426 | None:intergenic |
TGAAGAAGCTGCTCAGGCCA+AGG | 0.537390 | 4_4:-53371342 | None:intergenic |
AGAATCTGAAGATGTTTCAC+AGG | 0.541515 | 4_4:+53370588 | Msa0688110:CDS |
TCCAAGCAAAGTTAAGATCA+TGG | 0.542194 | 4_4:+53371509 | Msa0688110:CDS |
TTATGCTTCTTCTTTAACCG+AGG | 0.546831 | 4_4:-53370541 | None:intergenic |
AGGAGATAGAAACTTTGCAT+TGG | 0.549596 | 4_4:-53369181 | None:intergenic |
TCTAAATTCCAAGTACTCAA+AGG | 0.555958 | 4_4:+53371059 | Msa0688110:CDS |
AGATGTTTCACAGGTTCTCA+AGG | 0.558948 | 4_4:+53370597 | Msa0688110:CDS |
CATAGGAATAATGTCGATTG+AGG | 0.560971 | 4_4:+53370621 | Msa0688110:CDS |
AATCCATGCAGACGCAGGCA+AGG | 0.561183 | 4_4:+53370791 | Msa0688110:CDS |
CCTAATCCAATTTAGAGTAG+TGG | 0.563144 | 4_4:-53371319 | None:intergenic |
TTCTCACAGGTGTGAAAACA+GGG | 0.567671 | 4_4:-53369248 | None:intergenic |
AAATTCAATGCCTGTGAATG+AGG | 0.569144 | 4_4:+53370888 | Msa0688110:CDS |
TCGCTTGGCGGTCTTCATGA+CGG | 0.569448 | 4_4:-53371179 | None:intergenic |
CAGTCTGAAACGAAAAGCAA+AGG | 0.571815 | 4_4:+53370499 | Msa0688110:CDS |
AAACTCAGAAACTACAAGAC+AGG | 0.574537 | 4_4:+53369083 | Msa0688110:CDS |
TTAAGATCATGGTTAATCCA+GGG | 0.574929 | 4_4:+53371520 | Msa0688110:CDS |
CTGTGGATTTGTACCTGCAA+AGG | 0.576366 | 4_4:-53371578 | None:intergenic |
TTCAGACTGAAACGACGAGT+GGG | 0.579873 | 4_4:-53370485 | None:intergenic |
CGAGAATAGAGATGTGGCGT+TGG | 0.582736 | 4_4:+53370672 | Msa0688110:CDS |
TTCTGGTTGTACGATACAAG+TGG | 0.583451 | 4_4:-53370085 | None:intergenic |
ACTCACTAGTTATGATTGCA+GGG | 0.584367 | 4_4:-53370408 | None:intergenic |
TTGTGGCTGCAAAGTGCATG+TGG | 0.589553 | 4_4:+53371373 | Msa0688110:CDS |
TTCCATATAGCGATGATCAA+AGG | 0.589637 | 4_4:-53371463 | None:intergenic |
CTAGTGAGTTGGAGAGTGCA+AGG | 0.589873 | 4_4:+53370422 | Msa0688110:CDS |
CTTCATGCTGCTTTAATGCG+AGG | 0.590460 | 4_4:+53369147 | Msa0688110:CDS |
TGGAATGAAGTACTGAGAAA+GGG | 0.593329 | 4_4:+53371237 | Msa0688110:CDS |
CGAATGACGAGAATTTCGCT+TGG | 0.594200 | 4_4:-53371194 | None:intergenic |
AGAAACAGAGCGTGAAACAG+AGG | 0.597034 | 4_4:-53369205 | None:intergenic |
GATATGAGTCCAAGGTCACA+GGG | 0.597366 | 4_4:+53371486 | Msa0688110:CDS |
ATCCATGCAGACGCAGGCAA+GGG | 0.597592 | 4_4:+53370792 | Msa0688110:CDS |
ATCCACAGCCTAAATAAACT+AGG | 0.598571 | 4_4:+53371593 | Msa0688110:exon |
GAAACAATCCATGCAGACGC+AGG | 0.600891 | 4_4:+53370786 | Msa0688110:CDS |
TCAGTAATCTTCCTCAGAGA+GGG | 0.603053 | 4_4:+53370842 | Msa0688110:CDS |
AATGAGGAAGTAATGATAGA+GGG | 0.603683 | 4_4:+53370904 | Msa0688110:CDS |
AACCAGTGTACAAGATTACA+GGG | 0.611795 | 4_4:+53370171 | Msa0688110:CDS |
CTCAGTAATCTTCCTCAGAG+AGG | 0.618938 | 4_4:+53370841 | Msa0688110:CDS |
CTATCCTTAACATAAAACCC+TGG | 0.620148 | 4_4:-53371537 | None:intergenic |
ACAGAGCGTGAAACAGAGGA+AGG | 0.620860 | 4_4:-53369201 | None:intergenic |
ACATATGTGAGATTCTTGGT+TGG | 0.621634 | 4_4:-53370239 | None:intergenic |
AAACGACGAGTGGGAATCCG+TGG | 0.621697 | 4_4:-53370476 | None:intergenic |
TCAACCCTTAAAACTCCCAA+TGG | 0.624174 | 4_4:-53371429 | None:intergenic |
TCAATTGATTTCCCTCTCTG+AGG | 0.633408 | 4_4:-53370853 | None:intergenic |
ATATGGAAGATATGAGTCCA+AGG | 0.637824 | 4_4:+53371478 | Msa0688110:CDS |
TTTCAGACTGAAACGACGAG+TGG | 0.641833 | 4_4:-53370486 | None:intergenic |
AGCGAACGAGAATAGAGATG+TGG | 0.657156 | 4_4:+53370666 | Msa0688110:CDS |
GGTTGCCATAGCCAAAGCAG+TGG | 0.663368 | 4_4:+53369113 | Msa0688110:CDS |
ATATTGTTAGGCATTTCGTG+TGG | 0.667524 | 4_4:-53370108 | None:intergenic |
TCTGGTTGTACGATACAAGT+GGG | 0.669806 | 4_4:-53370084 | None:intergenic |
TCTTGGTTGGTAAAACCACA+AGG | 0.671271 | 4_4:-53370226 | None:intergenic |
AAAGGGATACTACTACCTTG+TGG | 0.671368 | 4_4:+53370211 | Msa0688110:CDS |
GTCTGAAACGAAAAGCAAAG+GGG | 0.723496 | 4_4:+53370501 | Msa0688110:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTAATTATCACATAGATT+TGG | - | chr4_4:53371646-53371665 | None:intergenic | 15.0% |
!! | ATCAAGAAAATCAAAATTGA+AGG | - | chr4_4:53369285-53369304 | None:intergenic | 20.0% |
!!! | TTTTGATTTTCTTGATGAAA+AGG | + | chr4_4:53369289-53369308 | Msa0688110:intron | 20.0% |
!!! | TTTGATTTTCTTGATGAAAA+GGG | + | chr4_4:53369290-53369309 | Msa0688110:intron | 20.0% |
!!! | AAGAAAAGTTACTTTTGATT+TGG | + | chr4_4:53369358-53369377 | Msa0688110:intron | 20.0% |
!! | AGAATAAATAAGATAGAGAA+AGG | - | chr4_4:53369576-53369595 | None:intergenic | 20.0% |
!!! | TCATTGTCATGTAAATTTTA+AGG | + | chr4_4:53369652-53369671 | Msa0688110:intron | 20.0% |
!! | AGATAATAAACATCATCATT+AGG | - | chr4_4:53369718-53369737 | None:intergenic | 20.0% |
!!! | GCATTTTCTCAAATTATTAT+TGG | - | chr4_4:53369862-53369881 | None:intergenic | 20.0% |
!!! | TAAAAAGATTAATTTTGGAG+TGG | - | chr4_4:53369995-53370014 | None:intergenic | 20.0% |
!! | TTTCTAAACATGAGAATTAT+TGG | + | chr4_4:53370044-53370063 | Msa0688110:intron | 20.0% |
!!! | TTTCTTCAATGTTGTTTATA+AGG | - | chr4_4:53370984-53371003 | None:intergenic | 20.0% |
!!! | AATTGCATTTTTCAAAAGAA+CGG | + | chr4_4:53371138-53371157 | Msa0688110:CDS | 20.0% |
! | TTGTTACTGTTATCATTGAT+AGG | + | chr4_4:53369402-53369421 | Msa0688110:intron | 25.0% |
! | TGTTACTGTTATCATTGATA+GGG | + | chr4_4:53369403-53369422 | Msa0688110:intron | 25.0% |
! | ATTGCATATTCCATAAATTC+AGG | - | chr4_4:53369445-53369464 | None:intergenic | 25.0% |
!! | TCATAATTTGTGAGAATTAC+AGG | - | chr4_4:53369483-53369502 | None:intergenic | 25.0% |
!! | TTTATTCCTTGTTTATAGCT+TGG | + | chr4_4:53369505-53369524 | Msa0688110:intron | 25.0% |
! | AAACTTTAAACTCTCATTCT+AGG | - | chr4_4:53369612-53369631 | None:intergenic | 25.0% |
! | CTGAGAACAATTATAAAGTT+GGG | - | chr4_4:53369765-53369784 | None:intergenic | 25.0% |
! | TCTGAGAACAATTATAAAGT+TGG | - | chr4_4:53369766-53369785 | None:intergenic | 25.0% |
! | ATAAACCAAGTTCAAGAAAA+GGG | + | chr4_4:53370194-53370213 | Msa0688110:CDS | 25.0% |
!! | AGTTCAAATTTTCTGTCAAT+GGG | - | chr4_4:53371014-53371033 | None:intergenic | 25.0% |
! | GATTTATGAAAGCTTCAAAA+TGG | - | chr4_4:53371095-53371114 | None:intergenic | 25.0% |
!!! | TTTTGAAGCTTTCATAAATC+AGG | + | chr4_4:53371095-53371114 | Msa0688110:CDS | 25.0% |
! | ACATGTTTCCTAGTTTATTT+AGG | - | chr4_4:53371604-53371623 | None:intergenic | 25.0% |
AACAGAGAAACAGAACAAAA+TGG | - | chr4_4:53369006-53369025 | None:intergenic | 30.0% | |
AACTACAAGACAGGAAATTA+AGG | + | chr4_4:53369092-53369111 | Msa0688110:CDS | 30.0% | |
TTCCATAAATTCAGGTACTT+CGG | - | chr4_4:53369437-53369456 | None:intergenic | 30.0% | |
TTTAAACTCTCATTCTAGGT+TGG | - | chr4_4:53369608-53369627 | None:intergenic | 30.0% | |
!!! | TTAATTTTGGAGTGGAAGTT+GGG | - | chr4_4:53369987-53370006 | None:intergenic | 30.0% |
!!! | ATTAATTTTGGAGTGGAAGT+TGG | - | chr4_4:53369988-53370007 | None:intergenic | 30.0% |
CCTAACAATATCTGAAAGTT+GGG | + | chr4_4:53370120-53370139 | Msa0688110:CDS | 30.0% | |
GATAAACCAAGTTCAAGAAA+AGG | + | chr4_4:53370193-53370212 | Msa0688110:CDS | 30.0% | |
TAAGAGAAGAAACAGTTTAG+AGG | + | chr4_4:53370351-53370370 | Msa0688110:CDS | 30.0% | |
AATGAGGAAGTAATGATAGA+GGG | + | chr4_4:53370904-53370923 | Msa0688110:CDS | 30.0% | |
! | GAGTTCAAATTTTCTGTCAA+TGG | - | chr4_4:53371015-53371034 | None:intergenic | 30.0% |
GAATTTAGAGACAGCTTATA+CGG | - | chr4_4:53371048-53371067 | None:intergenic | 30.0% | |
TCTAAATTCCAAGTACTCAA+AGG | + | chr4_4:53371059-53371078 | Msa0688110:CDS | 30.0% | |
AAATGCAATTCTCAAAGTCT+TGG | - | chr4_4:53371128-53371147 | None:intergenic | 30.0% | |
TTAAGATCATGGTTAATCCA+GGG | + | chr4_4:53371520-53371539 | Msa0688110:CDS | 30.0% | |
!! | TAATCCAGGGTTTTATGTTA+AGG | + | chr4_4:53371533-53371552 | Msa0688110:CDS | 30.0% |
!! | AGGGTTTTATGTTAAGGATA+GGG | + | chr4_4:53371539-53371558 | Msa0688110:CDS | 30.0% |
! | ATGTTAAGGATAGGGTATTA+AGG | + | chr4_4:53371547-53371566 | Msa0688110:CDS | 30.0% |
TGTTTCTCTGTTCTGTTTCA+TGG | + | chr4_4:53369014-53369033 | Msa0688110:exon | 35.0% | |
! | GTTTTCAAAGACAACAACAG+TGG | + | chr4_4:53369060-53369079 | Msa0688110:CDS | 35.0% |
AAACTCAGAAACTACAAGAC+AGG | + | chr4_4:53369083-53369102 | Msa0688110:CDS | 35.0% | |
AGGAGATAGAAACTTTGCAT+TGG | - | chr4_4:53369184-53369203 | None:intergenic | 35.0% | |
GGAAAGAAAGAAATTCTCAC+AGG | - | chr4_4:53369264-53369283 | None:intergenic | 35.0% | |
! | ATCCGAAGTACCTGAATTTA+TGG | + | chr4_4:53369432-53369451 | Msa0688110:intron | 35.0% |
! | TTCCTTGTTTATAGCTTGGT+TGG | + | chr4_4:53369509-53369528 | Msa0688110:intron | 35.0% |
TACCAACCAAGCTATAAACA+AGG | - | chr4_4:53369514-53369533 | None:intergenic | 35.0% | |
TTAAATGTAACCACGTGTGT+TGG | + | chr4_4:53369887-53369906 | Msa0688110:intron | 35.0% | |
!!! | TAATTTTGGAGTGGAAGTTG+GGG | - | chr4_4:53369986-53370005 | None:intergenic | 35.0% |
ATATTGTTAGGCATTTCGTG+TGG | - | chr4_4:53370111-53370130 | None:intergenic | 35.0% | |
GCCTAACAATATCTGAAAGT+TGG | + | chr4_4:53370119-53370138 | Msa0688110:CDS | 35.0% | |
CCCAACTTTCAGATATTGTT+AGG | - | chr4_4:53370123-53370142 | None:intergenic | 35.0% | |
ATATCTGAAAGTTGGGATGA+AGG | + | chr4_4:53370127-53370146 | Msa0688110:CDS | 35.0% | |
AAACCAGTGTACAAGATTAC+AGG | + | chr4_4:53370170-53370189 | Msa0688110:CDS | 35.0% | |
AACCAGTGTACAAGATTACA+GGG | + | chr4_4:53370171-53370190 | Msa0688110:CDS | 35.0% | |
! | AGTATCCCTTTTCTTGAACT+TGG | - | chr4_4:53370202-53370221 | None:intergenic | 35.0% |
ACATATGTGAGATTCTTGGT+TGG | - | chr4_4:53370242-53370261 | None:intergenic | 35.0% | |
! | TATATGATTTGCACAAGAGC+CGG | - | chr4_4:53370290-53370309 | None:intergenic | 35.0% |
ACTCACTAGTTATGATTGCA+GGG | - | chr4_4:53370411-53370430 | None:intergenic | 35.0% | |
AACTCACTAGTTATGATTGC+AGG | - | chr4_4:53370412-53370431 | None:intergenic | 35.0% | |
TGCAATCATAACTAGTGAGT+TGG | + | chr4_4:53370411-53370430 | Msa0688110:CDS | 35.0% | |
! | AGTCTGAAACGAAAAGCAAA+GGG | + | chr4_4:53370500-53370519 | Msa0688110:CDS | 35.0% |
TTATGCTTCTTCTTTAACCG+AGG | - | chr4_4:53370544-53370563 | None:intergenic | 35.0% | |
TCTTCAGATTCTGCTCTATT+TGG | - | chr4_4:53370580-53370599 | None:intergenic | 35.0% | |
AGAATCTGAAGATGTTTCAC+AGG | + | chr4_4:53370588-53370607 | Msa0688110:CDS | 35.0% | |
! | CATAGGAATAATGTCGATTG+AGG | + | chr4_4:53370621-53370640 | Msa0688110:CDS | 35.0% |
AAATTCAATGCCTGTGAATG+AGG | + | chr4_4:53370888-53370907 | Msa0688110:CDS | 35.0% | |
ATCATTACTTCCTCATTCAC+AGG | - | chr4_4:53370901-53370920 | None:intergenic | 35.0% | |
GAATGAGGAAGTAATGATAG+AGG | + | chr4_4:53370903-53370922 | Msa0688110:CDS | 35.0% | |
! | CATGACGGTCAATGAATTTT+GGG | - | chr4_4:53371167-53371186 | None:intergenic | 35.0% |
! | TCATGACGGTCAATGAATTT+TGG | - | chr4_4:53371168-53371187 | None:intergenic | 35.0% |
!! | TGGAATGAAGTACTGAGAAA+GGG | + | chr4_4:53371237-53371256 | Msa0688110:CDS | 35.0% |
GCATTACCACTACTCTAAAT+TGG | + | chr4_4:53371313-53371332 | Msa0688110:CDS | 35.0% | |
! | CCTAATCCAATTTAGAGTAG+TGG | - | chr4_4:53371322-53371341 | None:intergenic | 35.0% |
CCACTACTCTAAATTGGATT+AGG | + | chr4_4:53371319-53371338 | Msa0688110:CDS | 35.0% | |
! | ATTTTCTTTCAACCCACCAT+TGG | + | chr4_4:53371413-53371432 | Msa0688110:CDS | 35.0% |
! | TTTTCTTTCAACCCACCATT+GGG | + | chr4_4:53371414-53371433 | Msa0688110:CDS | 35.0% |
AACCTTTGATCATCGCTATA+TGG | + | chr4_4:53371461-53371480 | Msa0688110:CDS | 35.0% | |
TTCCATATAGCGATGATCAA+AGG | - | chr4_4:53371466-53371485 | None:intergenic | 35.0% | |
ATATGGAAGATATGAGTCCA+AGG | + | chr4_4:53371478-53371497 | Msa0688110:CDS | 35.0% | |
TCCAAGCAAAGTTAAGATCA+TGG | + | chr4_4:53371509-53371528 | Msa0688110:CDS | 35.0% | |
ACCATGATCTTAACTTTGCT+TGG | - | chr4_4:53371513-53371532 | None:intergenic | 35.0% | |
GTTAAGATCATGGTTAATCC+AGG | + | chr4_4:53371519-53371538 | Msa0688110:CDS | 35.0% | |
CTATCCTTAACATAAAACCC+TGG | - | chr4_4:53371540-53371559 | None:intergenic | 35.0% | |
!! | CAGGGTTTTATGTTAAGGAT+AGG | + | chr4_4:53371538-53371557 | Msa0688110:CDS | 35.0% |
ATCCACAGCCTAAATAAACT+AGG | + | chr4_4:53371593-53371612 | Msa0688110:exon | 35.0% | |
TTCCTAGTTTATTTAGGCTG+TGG | - | chr4_4:53371598-53371617 | None:intergenic | 35.0% | |
TTCTCACAGGTGTGAAAACA+GGG | - | chr4_4:53369251-53369270 | None:intergenic | 40.0% | |
ATTCTCACAGGTGTGAAAAC+AGG | - | chr4_4:53369252-53369271 | None:intergenic | 40.0% | |
GAATTCTGAACTGAATCCTG+TGG | + | chr4_4:53369686-53369705 | Msa0688110:intron | 40.0% | |
CATCATTAGGAATTTGCCAC+AGG | - | chr4_4:53369705-53369724 | None:intergenic | 40.0% | |
TCATGAGTCAGTATTGTGTC+CGG | - | chr4_4:53369836-53369855 | None:intergenic | 40.0% | |
ACACCTTCAACCTAAAGTGT+CGG | + | chr4_4:53369947-53369966 | Msa0688110:intron | 40.0% | |
TCTGGTTGTACGATACAAGT+GGG | - | chr4_4:53370087-53370106 | None:intergenic | 40.0% | |
! | TTCTGGTTGTACGATACAAG+TGG | - | chr4_4:53370088-53370107 | None:intergenic | 40.0% |
ATCCCTGTAATCTTGTACAC+TGG | - | chr4_4:53370176-53370195 | None:intergenic | 40.0% | |
AAAGGGATACTACTACCTTG+TGG | + | chr4_4:53370211-53370230 | Msa0688110:CDS | 40.0% | |
!! | TCTTGGTTGGTAAAACCACA+AGG | - | chr4_4:53370229-53370248 | None:intergenic | 40.0% |
!! | TACGGATTTGGTGTCATCAA+CGG | - | chr4_4:53370266-53370285 | None:intergenic | 40.0% |
CTTACTCCTGTAGCTTTCAT+TGG | - | chr4_4:53370335-53370354 | None:intergenic | 40.0% | |
TGCAGGGTTACATTTATTGC+AGG | - | chr4_4:53370395-53370414 | None:intergenic | 40.0% | |
! | CAATATTGTTGTTCCTGCCA+CGG | + | chr4_4:53370459-53370478 | Msa0688110:CDS | 40.0% |
! | CAGTCTGAAACGAAAAGCAA+AGG | + | chr4_4:53370499-53370518 | Msa0688110:CDS | 40.0% |
! | GTCTGAAACGAAAAGCAAAG+GGG | + | chr4_4:53370501-53370520 | Msa0688110:CDS | 40.0% |
! | TGATTTCGTGGTTGTTTCCT+CGG | + | chr4_4:53370524-53370543 | Msa0688110:CDS | 40.0% |
AGATGTTTCACAGGTTCTCA+AGG | + | chr4_4:53370597-53370616 | Msa0688110:CDS | 40.0% | |
!! | TTCTGAGATGCGATGTTCAT+TGG | + | chr4_4:53370702-53370721 | Msa0688110:CDS | 40.0% |
! | TCTGAGATGCGATGTTCATT+GGG | + | chr4_4:53370703-53370722 | Msa0688110:CDS | 40.0% |
TCAGTAATCTTCCTCAGAGA+GGG | + | chr4_4:53370842-53370861 | Msa0688110:CDS | 40.0% | |
! | TCAATTGATTTCCCTCTCTG+AGG | - | chr4_4:53370856-53370875 | None:intergenic | 40.0% |
CAGAGAGGGAAATCAATTGA+TGG | + | chr4_4:53370856-53370875 | Msa0688110:CDS | 40.0% | |
TTGCTCTTAGGAATTTGAGC+TGG | + | chr4_4:53371217-53371236 | Msa0688110:CDS | 40.0% | |
!! | CTGGAATGAAGTACTGAGAA+AGG | + | chr4_4:53371236-53371255 | Msa0688110:CDS | 40.0% |
! | CTCTAAATTGGATTAGGCCT+TGG | + | chr4_4:53371325-53371344 | Msa0688110:CDS | 40.0% |
GCTTCTTCAAGCTTTCTTTG+TGG | + | chr4_4:53371356-53371375 | Msa0688110:CDS | 40.0% | |
TCAACCCTTAAAACTCCCAA+TGG | - | chr4_4:53371432-53371451 | None:intergenic | 40.0% | |
! | GGATAGGGTATTAAGGTGTA+AGG | + | chr4_4:53371554-53371573 | Msa0688110:CDS | 40.0% |
TAGTTCCACTGCTTTGGCTA+TGG | - | chr4_4:53369121-53369140 | None:intergenic | 45.0% | |
AGCTCTTAGTTCCACTGCTT+TGG | - | chr4_4:53369127-53369146 | None:intergenic | 45.0% | |
!! | CTTCATGCTGCTTTAATGCG+AGG | + | chr4_4:53369147-53369166 | Msa0688110:CDS | 45.0% |
AGAAACAGAGCGTGAAACAG+AGG | - | chr4_4:53369208-53369227 | None:intergenic | 45.0% | |
GAAGAGCAGACACAAAACAC+CGG | + | chr4_4:53369814-53369833 | Msa0688110:intron | 45.0% | |
!! | AGACCGACACTTTAGGTTGA+AGG | - | chr4_4:53369953-53369972 | None:intergenic | 45.0% |
AGTGGAAGTTGGGGAATTAC+AGG | - | chr4_4:53369977-53369996 | None:intergenic | 45.0% | |
TTAGGCATTTCGTGTGGTTC+TGG | - | chr4_4:53370105-53370124 | None:intergenic | 45.0% | |
CGGGACATATGTGAGATTCT+TGG | - | chr4_4:53370246-53370265 | None:intergenic | 45.0% | |
!! | ACGGATTTGGTGTCATCAAC+GGG | - | chr4_4:53370265-53370284 | None:intergenic | 45.0% |
GATGACACCAAATCCGTAAC+CGG | + | chr4_4:53370268-53370287 | Msa0688110:CDS | 45.0% | |
ATTTGCACAAGAGCCGGTTA+CGG | - | chr4_4:53370284-53370303 | None:intergenic | 45.0% | |
CACCTACCAATGAAAGCTAC+AGG | + | chr4_4:53370326-53370345 | Msa0688110:CDS | 45.0% | |
CTCCTGTAGCTTTCATTGGT+AGG | - | chr4_4:53370331-53370350 | None:intergenic | 45.0% | |
CGTGGCAGGAACAACAATAT+TGG | - | chr4_4:53370461-53370480 | None:intergenic | 45.0% | |
TTCAGACTGAAACGACGAGT+GGG | - | chr4_4:53370488-53370507 | None:intergenic | 45.0% | |
TTTCAGACTGAAACGACGAG+TGG | - | chr4_4:53370489-53370508 | None:intergenic | 45.0% | |
AAAGCAAAGGGGTGATTTCG+TGG | + | chr4_4:53370512-53370531 | Msa0688110:CDS | 45.0% | |
TCACAGGTTCTCAAGGACAT+AGG | + | chr4_4:53370604-53370623 | Msa0688110:CDS | 45.0% | |
AGCGAACGAGAATAGAGATG+TGG | + | chr4_4:53370666-53370685 | Msa0688110:CDS | 45.0% | |
! | GAGACAGAAGATGGAGTACT+TGG | + | chr4_4:53370732-53370751 | Msa0688110:CDS | 45.0% |
CTCAGTAATCTTCCTCAGAG+AGG | + | chr4_4:53370841-53370860 | Msa0688110:CDS | 45.0% | |
CAGAACTGCCTTTGAGTACT+TGG | - | chr4_4:53371070-53371089 | None:intergenic | 45.0% | |
ATGACGAGAATTTCGCTTGG+CGG | - | chr4_4:53371194-53371213 | None:intergenic | 45.0% | |
CGAATGACGAGAATTTCGCT+TGG | - | chr4_4:53371197-53371216 | None:intergenic | 45.0% | |
TCTCGTCATTCGTTGCTCTT+AGG | + | chr4_4:53371205-53371224 | Msa0688110:CDS | 45.0% | |
AAAGCTTGAAGAAGCTGCTC+AGG | - | chr4_4:53371351-53371370 | None:intergenic | 45.0% | |
! | ACCCACCATTGGGAGTTTTA+AGG | + | chr4_4:53371424-53371443 | Msa0688110:CDS | 45.0% |
CCCTTAAAACTCCCAATGGT+GGG | - | chr4_4:53371428-53371447 | None:intergenic | 45.0% | |
!! | CCCACCATTGGGAGTTTTAA+GGG | + | chr4_4:53371425-53371444 | Msa0688110:CDS | 45.0% |
ACCCTTAAAACTCCCAATGG+TGG | - | chr4_4:53371429-53371448 | None:intergenic | 45.0% | |
AGATATGAGTCCAAGGTCAC+AGG | + | chr4_4:53371485-53371504 | Msa0688110:CDS | 45.0% | |
GATATGAGTCCAAGGTCACA+GGG | + | chr4_4:53371486-53371505 | Msa0688110:CDS | 45.0% | |
TAAGGTGTAAGGTCCTTTGC+AGG | + | chr4_4:53371565-53371584 | Msa0688110:CDS | 45.0% | |
CTGTGGATTTGTACCTGCAA+AGG | - | chr4_4:53371581-53371600 | None:intergenic | 45.0% | |
!!! | AAAATTAAAAAGATTAATTT+TGG | - | chr4_4:53370000-53370019 | None:intergenic | 5.0% |
!!! | TAATTTTTTTTTTATTTTGA+TGG | + | chr4_4:53370013-53370032 | Msa0688110:intron | 5.0% |
ACAGAGCGTGAAACAGAGGA+AGG | - | chr4_4:53369204-53369223 | None:intergenic | 50.0% | |
!! | CACGTGTGTTGGTGTTGTGT+CGG | + | chr4_4:53369898-53369917 | Msa0688110:intron | 50.0% |
TACAGGCAGACCGACACTTT+AGG | - | chr4_4:53369960-53369979 | None:intergenic | 50.0% | |
AGTTGGGATGAAGGAGAGTC+AGG | + | chr4_4:53370136-53370155 | Msa0688110:CDS | 50.0% | |
ACAAGAGCCGGTTACGGATT+TGG | - | chr4_4:53370278-53370297 | None:intergenic | 50.0% | |
! | CTAGTGAGTTGGAGAGTGCA+AGG | + | chr4_4:53370422-53370441 | Msa0688110:CDS | 50.0% |
CGAGAATAGAGATGTGGCGT+TGG | + | chr4_4:53370672-53370691 | Msa0688110:CDS | 50.0% | |
! | GAATAGAGATGTGGCGTTGG+TGG | + | chr4_4:53370675-53370694 | Msa0688110:CDS | 50.0% |
GGGAGAGTTGAGACAGAAGA+TGG | + | chr4_4:53370723-53370742 | Msa0688110:CDS | 50.0% | |
GAAACAATCCATGCAGACGC+AGG | + | chr4_4:53370786-53370805 | Msa0688110:CDS | 50.0% | |
TTGTGGCTGCAAAGTGCATG+TGG | + | chr4_4:53371373-53371392 | Msa0688110:CDS | 50.0% | |
GGTTGCCATAGCCAAAGCAG+TGG | + | chr4_4:53369113-53369132 | Msa0688110:CDS | 55.0% | |
CGACACAACACCAACACACG+TGG | - | chr4_4:53369900-53369919 | None:intergenic | 55.0% | |
GCCTGACACATGTCAGACGT+CGG | + | chr4_4:53369922-53369941 | Msa0688110:intron | 55.0% | |
TCCGACGTCTGACATGTGTC+AGG | - | chr4_4:53369926-53369945 | None:intergenic | 55.0% | |
AAACGACGAGTGGGAATCCG+TGG | - | chr4_4:53370479-53370498 | None:intergenic | 55.0% | |
AATCCATGCAGACGCAGGCA+AGG | + | chr4_4:53370791-53370810 | Msa0688110:CDS | 55.0% | |
ATCCATGCAGACGCAGGCAA+GGG | + | chr4_4:53370792-53370811 | Msa0688110:CDS | 55.0% | |
TCGCTTGGCGGTCTTCATGA+CGG | - | chr4_4:53371182-53371201 | None:intergenic | 55.0% | |
TGAAGAAGCTGCTCAGGCCA+AGG | - | chr4_4:53371345-53371364 | None:intergenic | 55.0% | |
TTGCTTGGACCCTGTGACCT+TGG | - | chr4_4:53371498-53371517 | None:intergenic | 55.0% | |
ATCCCTTGCCTGCGTCTGCA+TGG | - | chr4_4:53370797-53370816 | None:intergenic | 60.0% | |
GACGAGTGGGAATCCGTGGC+AGG | - | chr4_4:53370475-53370494 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 53368963 | 53371745 | 53368963 | ID=Msa0688110;Name=Msa0688110 |
chr4_4 | mRNA | 53368963 | 53371745 | 53368963 | ID=Msa0688110-mRNA-1;Parent=Msa0688110;Name=Msa0688110-mRNA-1;_AED=0.00;_eAED=0.00;_QI=70|1|1|1|1|1|2|140|588 |
chr4_4 | exon | 53368963 | 53369263 | 53368963 | ID=Msa0688110-mRNA-1:exon:14121;Parent=Msa0688110-mRNA-1 |
chr4_4 | exon | 53370070 | 53371745 | 53370070 | ID=Msa0688110-mRNA-1:exon:14122;Parent=Msa0688110-mRNA-1 |
chr4_4 | five_prime_UTR | 53368963 | 53369032 | 53368963 | ID=Msa0688110-mRNA-1:five_prime_utr;Parent=Msa0688110-mRNA-1 |
chr4_4 | CDS | 53369033 | 53369263 | 53369033 | ID=Msa0688110-mRNA-1:cds;Parent=Msa0688110-mRNA-1 |
chr4_4 | CDS | 53370070 | 53371605 | 53370070 | ID=Msa0688110-mRNA-1:cds;Parent=Msa0688110-mRNA-1 |
chr4_4 | three_prime_UTR | 53371606 | 53371745 | 53371606 | ID=Msa0688110-mRNA-1:three_prime_utr;Parent=Msa0688110-mRNA-1 |
Gene Sequence |
Protein sequence |