Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0498570 | XP_003599782.2 | 99.182 | 856 | 1 | 1 | 1 | 856 | 1 | 850 | 0.0 | 1746 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0498570 | sp|Q93VQ0|VCL1_ARATH | 73.660 | 877 | 191 | 9 | 1 | 856 | 1 | 858 | 0.0 | 1324 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0498570 | G7IXE7 | 99.182 | 856 | 1 | 1 | 1 | 856 | 1 | 850 | 0.0 | 1746 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0229140 | Msa0498570 | 0.903177 | 4.542142e-79 | -8.615850e-47 |
Msa0375060 | Msa0498570 | 0.807355 | 5.264369e-50 | -8.615850e-47 |
Msa0405660 | Msa0498570 | 0.940629 | 1.681716e-100 | -8.615850e-47 |
Msa0438630 | Msa0498570 | 0.893590 | 5.456895e-75 | -8.615850e-47 |
Msa0258670 | Msa0498570 | 0.822410 | 2.404194e-53 | -8.615850e-47 |
Msa0326670 | Msa0498570 | -0.802210 | 6.251026e-49 | -8.615850e-47 |
Msa0498570 | Msa0531990 | 0.826297 | 2.930939e-54 | -8.615850e-47 |
Msa0498570 | Msa0532100 | 0.823490 | 1.347128e-53 | -8.615850e-47 |
Msa0498570 | Msa0655990 | 0.817516 | 3.166793e-52 | -8.615850e-47 |
Msa0498570 | Msa0699530 | 0.813765 | 2.168402e-51 | -8.615850e-47 |
Msa0498570 | Msa0699920 | 0.816404 | 5.627963e-52 | -8.615850e-47 |
Msa0498570 | Msa0701840 | 0.836786 | 7.630900e-57 | -8.615850e-47 |
Msa0498570 | Msa1222030 | 0.827704 | 1.350728e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0498570 | MtrunA17_Chr3g0096061 | 98.719 | 859 | 2 | 2 | 1 | 856 | 1 | 853 | 0.0 | 1737 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0498570 | AT2G38020.1 | 73.660 | 877 | 191 | 9 | 1 | 856 | 1 | 858 | 0.0 | 1324 |
Msa0498570 | AT2G38020.2 | 74.331 | 822 | 178 | 6 | 1 | 802 | 1 | 809 | 0.0 | 1268 |
Find 240 sgRNAs with CRISPR-Local
Find 887 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAAGTGAAAACAGAATTTA+AGG | 0.173476 | 3_4:+35402150 | Msa0498570:CDS |
TGGATGCTGTTCTGCTTTAC+TGG | 0.199058 | 3_4:+35394174 | Msa0498570:CDS |
TTCTCGAGGGTCTGCAAGTT+TGG | 0.242669 | 3_4:-35403730 | None:intergenic |
TGGCAAAAGGTATTGGATTC+TGG | 0.251806 | 3_4:+35398737 | Msa0498570:CDS |
CTTCTTCTCCTATGCTTAAC+AGG | 0.253059 | 3_4:-35398646 | None:intergenic |
CGCGGTGAAGTTGGCTGATC+CGG | 0.270998 | 3_4:+35393162 | Msa0498570:CDS |
AGGCAACCGTTGGAGTTCTT+TGG | 0.274994 | 3_4:+35398852 | Msa0498570:CDS |
CGAATTGATCGAAAATAAAT+AGG | 0.276973 | 3_4:-35404721 | None:intergenic |
CACTCAGGAATAAGAATTAT+TGG | 0.279696 | 3_4:-35394257 | None:intergenic |
TCTTAGTATTCAGCAATATA+AGG | 0.297573 | 3_4:+35395843 | Msa0498570:CDS |
CTCCTAAGGGCAGCCAGTTA+TGG | 0.308461 | 3_4:+35395568 | Msa0498570:CDS |
TTGGATAGAGTTCGGGTTTA+CGG | 0.313821 | 3_4:-35391784 | None:intergenic |
ATGTTGCTGATTGTGCGTTT+TGG | 0.320723 | 3_4:+35393071 | Msa0498570:CDS |
AGGATGTGGCATTTCTTCTT+TGG | 0.326758 | 3_4:+35401423 | Msa0498570:intron |
CCATCGCATTGGATAGAGTT+CGG | 0.330714 | 3_4:-35391792 | None:intergenic |
AAGGACTTCTTCTTATCAAC+AGG | 0.338458 | 3_4:+35400978 | Msa0498570:CDS |
GAATTATTGGTTCGTCATAA+AGG | 0.341901 | 3_4:-35394244 | None:intergenic |
GATATTGTCCAATGCTAGTA+TGG | 0.344621 | 3_4:+35394292 | Msa0498570:CDS |
TCCTAAGGGCAGCCAGTTAT+GGG | 0.348083 | 3_4:+35395569 | Msa0498570:CDS |
TTCCACCTGTTTAGATGAAC+GGG | 0.348566 | 3_4:-35398472 | None:intergenic |
TCATATTTGGCAAAAGGTAT+TGG | 0.349151 | 3_4:+35398730 | Msa0498570:CDS |
TTGATTCATTCCGAGATATT+CGG | 0.351522 | 3_4:-35396013 | None:intergenic |
AGCAGCATCCGCAGCTTCCT+TGG | 0.359277 | 3_4:-35404540 | None:intergenic |
CATCGCATTGGATAGAGTTC+GGG | 0.360048 | 3_4:-35391791 | None:intergenic |
ACAAAAGGCCTGCCCATAAC+TGG | 0.360955 | 3_4:-35395581 | None:intergenic |
TCTCGAGGGTCTGCAAGTTT+GGG | 0.366487 | 3_4:-35403729 | None:intergenic |
CTGAGACGTTTGCCATTGTT+TGG | 0.371785 | 3_4:-35391724 | None:intergenic |
GAAGAGATGGTATTGGCTTA+AGG | 0.372569 | 3_4:+35402371 | Msa0498570:CDS |
TTCCTCCAGAGCAGCTTGCT+TGG | 0.373313 | 3_4:+35394144 | Msa0498570:CDS |
GCCGTGAAGCTGGACGATTT+TGG | 0.377662 | 3_4:-35391891 | None:intergenic |
TGTGGAGCCGCCACGGTGTA+TGG | 0.381850 | 3_4:+35393189 | Msa0498570:CDS |
TTCTTCTTTGGAAAGAATCA+TGG | 0.384884 | 3_4:+35401435 | Msa0498570:CDS |
GAGCCGCAGTATACGGTGTC+TGG | 0.388055 | 3_4:+35393220 | Msa0498570:CDS |
AAAATCGCCGCCGCTCCTTT+CGG | 0.388295 | 3_4:+35391839 | Msa0498570:CDS |
GATGTTGGTGAGCATTTATC+AGG | 0.390074 | 3_4:-35395972 | None:intergenic |
TGCTAATTGTCTGGCCTGTA+TGG | 0.391082 | 3_4:-35398877 | None:intergenic |
CCACACCAAGCAAGCTGCTC+TGG | 0.392027 | 3_4:-35394149 | None:intergenic |
TCTAGAGATTCTGCTTGATA+AGG | 0.399103 | 3_4:+35398272 | Msa0498570:CDS |
TCAGCCAACTTCACCGCGTT+AGG | 0.401454 | 3_4:-35393157 | None:intergenic |
TCCAAAATCGTCCAGCTTCA+CGG | 0.408922 | 3_4:+35391890 | Msa0498570:CDS |
TGCTAAGATAACTGCGTCAT+TGG | 0.410927 | 3_4:+35398230 | Msa0498570:CDS |
TAGGTAACCGGTTCTCCATC+AGG | 0.411163 | 3_4:-35394221 | None:intergenic |
TGATTCAAAGGTATGTTCCT+TGG | 0.412852 | 3_4:-35401552 | None:intergenic |
GAGCGGACTCGCCGTGAAGC+TGG | 0.414617 | 3_4:-35391901 | None:intergenic |
CGAACCCCGTTCATCTAAAC+AGG | 0.421606 | 3_4:+35398467 | Msa0498570:CDS |
ACAGTTTCAATCTTCACAAT+TGG | 0.427477 | 3_4:+35394341 | Msa0498570:CDS |
TCAATGCATGCCTCGACAAA+TGG | 0.430793 | 3_4:-35403672 | None:intergenic |
AACCCCGGCGGTAGGTTAAT+CGG | 0.435433 | 3_4:+35391983 | Msa0498570:CDS |
CTTACACCATCTGTCCTGAT+TGG | 0.435960 | 3_4:+35395946 | Msa0498570:CDS |
CTCTGGCCACAATCAAGGAC+TGG | 0.436871 | 3_4:+35402400 | Msa0498570:CDS |
CAGAAATTCCATACTAGCAT+TGG | 0.439342 | 3_4:-35394300 | None:intergenic |
CAAGCAAGGCAGCTAACTTT+CGG | 0.439766 | 3_4:-35398437 | None:intergenic |
TTACTTGGTGTGGGAGATGG+TGG | 0.441418 | 3_4:+35393256 | Msa0498570:CDS |
GGGAGATGGTGGTGAGGAGG+AGG | 0.444591 | 3_4:+35393267 | Msa0498570:CDS |
TGGTGGTGAGGAGGAGGATG+CGG | 0.446772 | 3_4:+35393273 | Msa0498570:CDS |
CATTTATCAGGCGACCAATC+AGG | 0.447792 | 3_4:-35395960 | None:intergenic |
TAGTATGGAATTTCTGCAAC+GGG | 0.449925 | 3_4:+35394307 | Msa0498570:CDS |
TGTCTCTTTGATCATGTAAG+AGG | 0.451821 | 3_4:-35404826 | None:intergenic |
ATGCATTGAAGCAGATGAAA+AGG | 0.452861 | 3_4:+35403686 | Msa0498570:CDS |
TTATTACCTAACGATAGATT+CGG | 0.453741 | 3_4:-35392094 | None:intergenic |
CTTGCGTCATTTACTCATGA+TGG | 0.454216 | 3_4:+35393394 | Msa0498570:CDS |
GGACAGTCGTATGCTCGAAT+TGG | 0.456669 | 3_4:+35404512 | Msa0498570:intron |
GGAGTTCTTTGGAACCATAC+AGG | 0.459956 | 3_4:+35398863 | Msa0498570:CDS |
TGGTGTCACGGGATGGGAAG+TGG | 0.460977 | 3_4:+35393371 | Msa0498570:CDS |
ATCTCCTCGCCGATACCGTC+TGG | 0.464440 | 3_4:+35391957 | Msa0498570:CDS |
ATTGAACCGAATCTATCGTT+AGG | 0.467559 | 3_4:+35392088 | Msa0498570:CDS |
GCCCATAACTGGCTGCCCTT+AGG | 0.467629 | 3_4:-35395570 | None:intergenic |
AATCCGGACTTGTATTGTCC+TGG | 0.468046 | 3_4:+35402108 | Msa0498570:CDS |
CAGCCAACTTCACCGCGTTA+GGG | 0.469202 | 3_4:-35393156 | None:intergenic |
CTCAGCTGCCTTTGATTCAA+AGG | 0.470260 | 3_4:-35401564 | None:intergenic |
GGTTATTGAGCCGCAGTATA+CGG | 0.474902 | 3_4:+35393213 | Msa0498570:CDS |
TAAGTCCCGTGCTAATTGTC+TGG | 0.474919 | 3_4:-35398886 | None:intergenic |
GTTACTACGTCGGATTTGAC+TGG | 0.477285 | 3_4:+35393427 | Msa0498570:CDS |
TTCTAAAACTTACCTATTGG+AGG | 0.477730 | 3_4:-35402456 | None:intergenic |
GACGGTGTGCAGAGGCTTGG+TGG | 0.478653 | 3_4:+35393316 | Msa0498570:CDS |
AAACCCTAACGCGGTGAAGT+TGG | 0.478744 | 3_4:+35393153 | Msa0498570:CDS |
CGCGCCAACGAACTCTCCTA+AGG | 0.480577 | 3_4:+35395554 | Msa0498570:CDS |
GCGGTGAAGTTGGCTGATCC+GGG | 0.483726 | 3_4:+35393163 | Msa0498570:CDS |
AAATCAAGCTTACCTACAAA+AGG | 0.483898 | 3_4:-35395596 | None:intergenic |
GGATGCTGTTCTGCTTTACT+GGG | 0.487993 | 3_4:+35394175 | Msa0498570:CDS |
CAAGTATAAGTGACACAATC+CGG | 0.488003 | 3_4:+35402092 | Msa0498570:CDS |
TGGTCACTTCAAGTTCATGC+TGG | 0.488318 | 3_4:-35402045 | None:intergenic |
AAGGAGAAGAAACCTCCAAT+AGG | 0.489908 | 3_4:+35402444 | Msa0498570:CDS |
AAGAGGACCGTTGCAGAAGA+TGG | 0.490500 | 3_4:+35393348 | Msa0498570:CDS |
GATGGGCCCTGATGGAGAAC+CGG | 0.492155 | 3_4:+35394214 | Msa0498570:CDS |
ACGCAGCTCGATGATTTCCC+AGG | 0.493746 | 3_4:-35402126 | None:intergenic |
TACGAGGAGGCAGAAAAGTC+AGG | 0.496988 | 3_4:-35404691 | None:intergenic |
CCAGAGCAGCTTGCTTGGTG+TGG | 0.497588 | 3_4:+35394149 | Msa0498570:CDS |
TTCCCAGGACAATACAAGTC+CGG | 0.498893 | 3_4:-35402111 | None:intergenic |
CTCGTCTGCGTTGTTCAAGA+TGG | 0.501709 | 3_4:+35392031 | Msa0498570:CDS |
AGCAAGGGATCTCCACTTCA+TGG | 0.501761 | 3_4:+35401482 | Msa0498570:CDS |
TGTGGGAGATGGTGGTGAGG+AGG | 0.503509 | 3_4:+35393264 | Msa0498570:CDS |
CTTCGATTATTCTCCTCCTC+CGG | 0.504997 | 3_4:+35391932 | Msa0498570:CDS |
TGGAGATCCCTTGCTTGCCA+TGG | 0.506046 | 3_4:-35401474 | None:intergenic |
AAGATTGAAACTGTGGAGTC+AGG | 0.507333 | 3_4:-35394332 | None:intergenic |
GGGGTTCCGCCAGACGGTAT+CGG | 0.507535 | 3_4:-35391966 | None:intergenic |
TGCGGCGGTGATTGCAGTTG+AGG | 0.511307 | 3_4:+35393291 | Msa0498570:CDS |
GGAGATCCCTTGCTTGCCAT+GGG | 0.511908 | 3_4:-35401473 | None:intergenic |
TCGTCATAAAGGTAGGTAAC+CGG | 0.512033 | 3_4:-35394233 | None:intergenic |
TCTTCTTTGGAAAGAATCAT+GGG | 0.514000 | 3_4:+35401436 | Msa0498570:CDS |
GGAACATACCTTTGAATCAA+AGG | 0.514086 | 3_4:+35401556 | Msa0498570:CDS |
AGAAGATACAGCCTTGATGA+AGG | 0.515874 | 3_4:+35398664 | Msa0498570:CDS |
AAGGGCAGCCAGTTATGGGC+AGG | 0.516825 | 3_4:+35395573 | Msa0498570:CDS |
GAGGACGGTGTGCAGAGGCT+TGG | 0.516868 | 3_4:+35393313 | Msa0498570:CDS |
ATGAGCAGCAACTGCTGCAT+AGG | 0.517654 | 3_4:-35398397 | None:intergenic |
AAATGGCGTCGTTTGTATAA+CGG | 0.519833 | 3_4:+35393096 | Msa0498570:CDS |
TGCAGAAGATGGTGGTGTCA+CGG | 0.520389 | 3_4:+35393359 | Msa0498570:CDS |
AAAGGTATTGGATTCTGGAA+AGG | 0.522561 | 3_4:+35398742 | Msa0498570:CDS |
GGAAACACGTCGACCTCGCT+CGG | 0.524035 | 3_4:+35391813 | Msa0498570:CDS |
TTATATTGCTGAATACTAAG+AGG | 0.525483 | 3_4:-35395841 | None:intergenic |
TCGAATAAAACTTATTGAGA+AGG | 0.527366 | 3_4:+35401508 | Msa0498570:CDS |
CTGCCCTTAGGAGAGTTCGT+TGG | 0.528383 | 3_4:-35395558 | None:intergenic |
GTTGGCTGATCCGGGGATTG+TGG | 0.529245 | 3_4:+35393171 | Msa0498570:CDS |
CGTCATTTACTCATGATGGC+CGG | 0.529492 | 3_4:+35393398 | Msa0498570:CDS |
CACCAAGCAAGCTGCTCTGG+AGG | 0.533015 | 3_4:-35394146 | None:intergenic |
TTTGGAATCGTCACGGATCA+CGG | 0.533266 | 3_4:-35391873 | None:intergenic |
AGATGGTGGTGTCACGGGAT+GGG | 0.533613 | 3_4:+35393365 | Msa0498570:CDS |
GTCGTATGCTCGAATTGGTA+TGG | 0.537967 | 3_4:+35404517 | Msa0498570:intron |
GGCAGCCCAGTCCTTGATTG+TGG | 0.538088 | 3_4:-35402406 | None:intergenic |
ATTCCGATTAACCTACCGCC+GGG | 0.539342 | 3_4:-35391986 | None:intergenic |
ACACATGCTTCAACAGCCTC+AGG | 0.541349 | 3_4:-35395502 | None:intergenic |
TTTGCCATTGTTTGGAAGAG+TGG | 0.543062 | 3_4:-35391716 | None:intergenic |
AGCCGCAGTATACGGTGTCT+GGG | 0.544978 | 3_4:+35393221 | Msa0498570:CDS |
CTGCGTTGTTCAAGATGGAA+CGG | 0.545056 | 3_4:+35392036 | Msa0498570:CDS |
CGGGGATTGTGGAGCCGCCA+CGG | 0.546561 | 3_4:+35393182 | Msa0498570:CDS |
TGATCAAGGTGGAGAAGACA+TGG | 0.547991 | 3_4:-35391666 | None:intergenic |
ATTCCACCTGTTTAGATGAA+CGG | 0.548796 | 3_4:-35398473 | None:intergenic |
ATCTCTAGAAGAGTAGCATC+GGG | 0.550017 | 3_4:-35398258 | None:intergenic |
GTCTCTTTGATCATGTAAGA+GGG | 0.550254 | 3_4:-35404825 | None:intergenic |
AAGATGGTGGTGTCACGGGA+TGG | 0.552664 | 3_4:+35393364 | Msa0498570:CDS |
GCAGAAGATGGTGGTGTCAC+GGG | 0.552876 | 3_4:+35393360 | Msa0498570:CDS |
TCAAAAGACGGTGAGTTGCT+TGG | 0.554692 | 3_4:+35404569 | Msa0498570:CDS |
TGGTGTGGGAGATGGTGGTG+AGG | 0.554808 | 3_4:+35393261 | Msa0498570:CDS |
ATCCGGACTTGTATTGTCCT+GGG | 0.555622 | 3_4:+35402109 | Msa0498570:CDS |
TTTATTCGAGGACCATGAAG+TGG | 0.556071 | 3_4:-35401494 | None:intergenic |
TGTCGGAGAAGAGATGGTAT+TGG | 0.556366 | 3_4:+35402364 | Msa0498570:CDS |
TCGACGTGTTTCCATCGCAT+TGG | 0.557598 | 3_4:-35391803 | None:intergenic |
AAGACGGTGAGTTGCTTGGT+CGG | 0.558308 | 3_4:+35404573 | Msa0498570:CDS |
TACCACATTAACCTCAGATA+AGG | 0.558565 | 3_4:-35404777 | None:intergenic |
ATTCTTATTCCTGAGTGCGA+TGG | 0.559064 | 3_4:+35394263 | Msa0498570:CDS |
TATTGGTTCGTCATAAAGGT+AGG | 0.559582 | 3_4:-35394240 | None:intergenic |
GTTCCTCTCCTGTTAAGCAT+AGG | 0.561921 | 3_4:+35398638 | Msa0498570:CDS |
TCTGGCCACAATCAAGGACT+GGG | 0.562575 | 3_4:+35402401 | Msa0498570:CDS |
CTTGGTGGTGAGATGCTAAG+AGG | 0.563154 | 3_4:+35393331 | Msa0498570:CDS |
AGAAATGTGTAAAATTCTGC+GGG | 0.563554 | 3_4:+35395783 | Msa0498570:CDS |
TGCATTGAAGCAGATGAAAA+GGG | 0.563780 | 3_4:+35403687 | Msa0498570:CDS |
AATCTCTAGAAGAGTAGCAT+CGG | 0.563932 | 3_4:-35398259 | None:intergenic |
AGGAGGTGGTGATAATGCAC+TGG | 0.564792 | 3_4:+35398202 | Msa0498570:intron |
TGCTCGAATTGGTATGGCCA+AGG | 0.566532 | 3_4:+35404523 | Msa0498570:CDS |
AAGAAATGTGTAAAATTCTG+CGG | 0.567717 | 3_4:+35395782 | Msa0498570:CDS |
TTGCCATTGTTTGGAAGAGT+GGG | 0.569107 | 3_4:-35391715 | None:intergenic |
GCAGCTTGCTTGGTGTGGAA+TGG | 0.569731 | 3_4:+35394154 | Msa0498570:CDS |
TCCGCAATGCAAGCAGATGT+TGG | 0.571309 | 3_4:-35395987 | None:intergenic |
GAGTGGACCGCCGAAAGGAG+CGG | 0.572901 | 3_4:-35391849 | None:intergenic |
CATTGTTTGGAAGAGTGGGA+TGG | 0.575318 | 3_4:-35391711 | None:intergenic |
ATCCTCACTCCATCGCACTC+AGG | 0.575710 | 3_4:-35394272 | None:intergenic |
ACATTCAGTCGCCTTCATCA+AGG | 0.578060 | 3_4:-35398675 | None:intergenic |
TAATCGAAGCTTACGAAGAG+CGG | 0.579386 | 3_4:-35391918 | None:intergenic |
GGCGAGGAGATGACCGGAGG+AGG | 0.579473 | 3_4:-35391945 | None:intergenic |
CCGAACTCTATCCAATGCGA+TGG | 0.579890 | 3_4:+35391792 | Msa0498570:CDS |
GCGTCATACAGCAAAGCTGC+GGG | 0.580917 | 3_4:-35394374 | None:intergenic |
ACTTGAAGTGACCACAAAGC+AGG | 0.580954 | 3_4:+35402054 | Msa0498570:CDS |
CTTTGAATCAAAGGCAGCTG+AGG | 0.582645 | 3_4:+35401565 | Msa0498570:CDS |
TCGTCACGGATCACGGCGAG+TGG | 0.583016 | 3_4:-35391866 | None:intergenic |
GATGATGCAGAGGCAACCGT+TGG | 0.584115 | 3_4:+35398842 | Msa0498570:intron |
CTAGTATGGAATTTCTGCAA+CGG | 0.584740 | 3_4:+35394306 | Msa0498570:CDS |
TACAGGTGTCGGAGAAGAGA+TGG | 0.586198 | 3_4:+35402358 | Msa0498570:intron |
TACGGTAGTAACGGTTGTAG+AGG | 0.586205 | 3_4:-35391766 | None:intergenic |
ATCGCCGCCGCTCCTTTCGG+CGG | 0.587470 | 3_4:+35391842 | Msa0498570:CDS |
AGGTTATAGGCCATTTGTCG+AGG | 0.587978 | 3_4:+35403662 | Msa0498570:intron |
CGTGGCGGCTCCACAATCCC+CGG | 0.588150 | 3_4:-35393181 | None:intergenic |
TACGGTGTCTGGGAATGTTG+AGG | 0.590077 | 3_4:+35393231 | Msa0498570:CDS |
GTGATTGCAGTTGAGGAGGA+CGG | 0.591821 | 3_4:+35393298 | Msa0498570:CDS |
GGTATCGGCGAGGAGATGAC+CGG | 0.593558 | 3_4:-35391951 | None:intergenic |
TTCCTGAGTGCGATGGAGTG+AGG | 0.596415 | 3_4:+35394270 | Msa0498570:CDS |
TGGACCGCCGAAAGGAGCGG+CGG | 0.596652 | 3_4:-35391846 | None:intergenic |
GTTCGGGTTTACGGTAGTAA+CGG | 0.598178 | 3_4:-35391775 | None:intergenic |
ATGCTTCAACAGCCTCAGGA+AGG | 0.598204 | 3_4:-35395498 | None:intergenic |
TACAGGCCAGACAATTAGCA+CGG | 0.598484 | 3_4:+35398880 | Msa0498570:CDS |
TGGTGAGGAGGAGGATGCGG+CGG | 0.599087 | 3_4:+35393276 | Msa0498570:CDS |
GATACCGTCTGGCGGAACCC+CGG | 0.600292 | 3_4:+35391968 | Msa0498570:CDS |
TCTGGCGGAACCCCGGCGGT+AGG | 0.600872 | 3_4:+35391975 | Msa0498570:CDS |
GCAGTGCGCAGCTTTGAGAT+CGG | 0.602610 | 3_4:+35395814 | Msa0498570:CDS |
CATTCCGATTAACCTACCGC+CGG | 0.602682 | 3_4:-35391987 | None:intergenic |
GACACCACCATCTTCTGCAA+CGG | 0.602911 | 3_4:-35393355 | None:intergenic |
TACCTTATCTGAGGTTAATG+TGG | 0.602974 | 3_4:+35404775 | Msa0498570:three_prime_UTR |
ACCGCCGGGGTTCCGCCAGA+CGG | 0.603795 | 3_4:-35391972 | None:intergenic |
AGGCGACCAATCAGGACAGA+TGG | 0.604026 | 3_4:-35395952 | None:intergenic |
ACGGCGAGTGGACCGCCGAA+AGG | 0.605300 | 3_4:-35391854 | None:intergenic |
CTCTTTGATCATGTAAGAGG+GGG | 0.605434 | 3_4:-35404823 | None:intergenic |
ACTTATTTATAACTTATGCA+CGG | 0.605925 | 3_4:+35398904 | Msa0498570:CDS |
GAAGCATGTGTTGATGCTGC+AGG | 0.606318 | 3_4:+35395514 | Msa0498570:CDS |
CCGGCTTCTTGTTACTACGT+CGG | 0.606461 | 3_4:+35393417 | Msa0498570:CDS |
AGGTAACCGGTTCTCCATCA+GGG | 0.607086 | 3_4:-35394220 | None:intergenic |
GGCGGTGATTGCAGTTGAGG+AGG | 0.608076 | 3_4:+35393294 | Msa0498570:CDS |
GACTGGTGTTATCATCGAGA+GGG | 0.609135 | 3_4:+35393444 | Msa0498570:CDS |
GTAGGTTAATCGGAATGTCG+TGG | 0.613022 | 3_4:+35391993 | Msa0498570:CDS |
TGCTTCAACAGCCTCAGGAA+GGG | 0.613074 | 3_4:-35395497 | None:intergenic |
TTGAGGAGGACGGTGTGCAG+AGG | 0.614752 | 3_4:+35393308 | Msa0498570:CDS |
GGCAAACGTCTCAGTAGCAG+CGG | 0.614786 | 3_4:+35391733 | Msa0498570:CDS |
CCGACGTAGTAACAAGAAGC+CGG | 0.616053 | 3_4:-35393417 | None:intergenic |
TCTCCTATGCTTAACAGGAG+AGG | 0.616681 | 3_4:-35398641 | None:intergenic |
ATCGAAAATAAATAGGAAAG+CGG | 0.617713 | 3_4:-35404714 | None:intergenic |
TTGCGGATATCCGAATATCT+CGG | 0.618444 | 3_4:+35396003 | Msa0498570:CDS |
CGCGTCATACAGCAAAGCTG+CGG | 0.620218 | 3_4:-35394375 | None:intergenic |
ACCAACATCTGCTTGCATTG+CGG | 0.622579 | 3_4:+35395986 | Msa0498570:CDS |
TCCTCGCCGATACCGTCTGG+CGG | 0.627419 | 3_4:+35391960 | Msa0498570:CDS |
TGTTTGGAAGAGTGGGATGG+TGG | 0.628176 | 3_4:-35391708 | None:intergenic |
GCGCCAACGAACTCTCCTAA+GGG | 0.630802 | 3_4:+35395555 | Msa0498570:CDS |
TTGATGAAGGCGACTGAATG+TGG | 0.633961 | 3_4:+35398677 | Msa0498570:CDS |
TGACTGGTGTTATCATCGAG+AGG | 0.637654 | 3_4:+35393443 | Msa0498570:CDS |
CGGTGAAGTTGGCTGATCCG+GGG | 0.639768 | 3_4:+35393164 | Msa0498570:CDS |
TGGTATGGCCAAGGAAGCTG+CGG | 0.640973 | 3_4:+35404532 | Msa0498570:CDS |
CATCCCACTCTTCCAAACAA+TGG | 0.642931 | 3_4:+35391712 | Msa0498570:exon |
AGGACTTCTTCTTATCAACA+GGG | 0.646073 | 3_4:+35400979 | Msa0498570:CDS |
TCTCAGTTAAAAGTGTGCAA+AGG | 0.649118 | 3_4:+35398369 | Msa0498570:intron |
ACAGGCCAGACAATTAGCAC+GGG | 0.649292 | 3_4:+35398881 | Msa0498570:CDS |
GATAAGATCGTCCCTTCCTG+AGG | 0.650860 | 3_4:+35395486 | Msa0498570:CDS |
GCAAGGCAGCTAACTTTCGG+CGG | 0.651634 | 3_4:-35398434 | None:intergenic |
GGGTTCGTGTTCAACAAGCA+AGG | 0.653717 | 3_4:-35398451 | None:intergenic |
TCTCTTTGATCATGTAAGAG+GGG | 0.654355 | 3_4:-35404824 | None:intergenic |
ATGGTTCCAAAGAACTCCAA+CGG | 0.655891 | 3_4:-35398858 | None:intergenic |
GGAGCCGCCACGGTGTATGG+CGG | 0.656611 | 3_4:+35393192 | Msa0498570:CDS |
GCTGCTGCACAGTCAAAAGA+CGG | 0.657054 | 3_4:+35404557 | Msa0498570:CDS |
TATCATCGAGAGGGAGTGCG+AGG | 0.667435 | 3_4:+35393453 | Msa0498570:CDS |
AATTGTGAAGATTGAAACTG+TGG | 0.675128 | 3_4:-35394339 | None:intergenic |
ATCGGCGAGGAGATGACCGG+AGG | 0.676377 | 3_4:-35391948 | None:intergenic |
ACCGTCTGGCGGAACCCCGG+CGG | 0.677849 | 3_4:+35391971 | Msa0498570:CDS |
AGGACCGTTGCAGAAGATGG+TGG | 0.678490 | 3_4:+35393351 | Msa0498570:CDS |
TCCGCCAGACGGTATCGGCG+AGG | 0.680273 | 3_4:-35391961 | None:intergenic |
ACGTCTCAGTAGCAGCGGAG+TGG | 0.683175 | 3_4:+35391738 | Msa0498570:CDS |
TTCCCAGACACCGTATACTG+CGG | 0.689357 | 3_4:-35393223 | None:intergenic |
AATAGGAAAGCGGTACGAGG+AGG | 0.697951 | 3_4:-35404704 | None:intergenic |
GGAGGTGGTGATAATGCACT+GGG | 0.702431 | 3_4:+35398203 | Msa0498570:intron |
ATAAATAGGAAAGCGGTACG+AGG | 0.702780 | 3_4:-35404707 | None:intergenic |
GCAGACGAGAGTATGATCAT+CGG | 0.705692 | 3_4:-35392017 | None:intergenic |
TCCACCTGTTTAGATGAACG+GGG | 0.712415 | 3_4:-35398471 | None:intergenic |
TTCCGATTAACCTACCGCCG+GGG | 0.712943 | 3_4:-35391985 | None:intergenic |
TCAATAACCGCCATACACCG+TGG | 0.722018 | 3_4:-35393199 | None:intergenic |
ATAACCGCCATACACCGTGG+CGG | 0.766199 | 3_4:-35393196 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAAATTATTTTTAAAAAT+TGG | - | chr3_4:35397434-35397453 | None:intergenic | 0.0% |
!!! | TTTTTAAAAATAATTTATTT+TGG | + | chr3_4:35397435-35397454 | Msa0498570:intron | 0.0% |
!! | ATAAATAAAAAATTATATTA+TGG | - | chr3_4:35404431-35404450 | None:intergenic | 0.0% |
!!! | TATTTGTTTTTTGAAAATTT+AGG | + | chr3_4:35392123-35392142 | Msa0498570:intron | 10.0% |
!!! | TTTTTATAAAAATTATAAGC+TGG | + | chr3_4:35392243-35392262 | Msa0498570:intron | 10.0% |
!! | ATATTACTTAAAATACTAAA+AGG | - | chr3_4:35392680-35392699 | None:intergenic | 10.0% |
!! | TCATAATAATTAACAAAATT+GGG | - | chr3_4:35393969-35393988 | None:intergenic | 10.0% |
!! | ATCATAATAATTAACAAAAT+TGG | - | chr3_4:35393970-35393989 | None:intergenic | 10.0% |
!! | ACTTATATTCATTAAATATA+GGG | - | chr3_4:35394922-35394941 | None:intergenic | 10.0% |
!!! | AAACAATTTTTCAAATATTT+TGG | - | chr3_4:35395645-35395664 | None:intergenic | 10.0% |
!!! | TCTGATTTTATTAAAAAAAA+AGG | - | chr3_4:35396188-35396207 | None:intergenic | 10.0% |
!! | TATTATTAAAGATTATCATT+TGG | - | chr3_4:35396386-35396405 | None:intergenic | 10.0% |
!! | CCAAAAATAAAATAAAATAA+AGG | - | chr3_4:35396882-35396901 | None:intergenic | 10.0% |
!!! | CCTTTATTTTATTTTATTTT+TGG | + | chr3_4:35396879-35396898 | Msa0498570:intron | 10.0% |
!!! | TATTTTATTTTATTTTTGGA+TGG | + | chr3_4:35396883-35396902 | Msa0498570:intron | 10.0% |
!! | CTATAAAATTAAAATAATTC+AGG | - | chr3_4:35400386-35400405 | None:intergenic | 10.0% |
!! | TCTTAATCATAATTAAATAA+GGG | - | chr3_4:35400682-35400701 | None:intergenic | 10.0% |
!! | TTCTTAATCATAATTAAATA+AGG | - | chr3_4:35400683-35400702 | None:intergenic | 10.0% |
!! | TCTTTAAATATTAAAATTAG+AGG | + | chr3_4:35400744-35400763 | Msa0498570:intron | 10.0% |
!!! | TAATTCAAAGATTTATTTTA+TGG | - | chr3_4:35401643-35401662 | None:intergenic | 10.0% |
!! | AAATTATTATTGTTTATTTG+AGG | - | chr3_4:35403094-35403113 | None:intergenic | 10.0% |
!!! | ACAATAATAATTTTATTATG+AGG | + | chr3_4:35403101-35403120 | Msa0498570:intron | 10.0% |
!!! | TTTTTTGTTTTTTTTCTCAA+GGG | - | chr3_4:35391638-35391657 | None:intergenic | 15.0% |
!!! | CTAAAGATATTTTTTTATAC+TGG | - | chr3_4:35392981-35393000 | None:intergenic | 15.0% |
!! | AAATATTATCAATGCTAAAA+GGG | - | chr3_4:35393016-35393035 | None:intergenic | 15.0% |
!! | TAATATTTGATTATTGTAAC+AGG | + | chr3_4:35393028-35393047 | Msa0498570:intron | 15.0% |
!! | ATTTAAGAAATTAGAATGAT+TGG | + | chr3_4:35393737-35393756 | Msa0498570:intron | 15.0% |
!! | TTTAAGAAATTAGAATGATT+GGG | + | chr3_4:35393738-35393757 | Msa0498570:intron | 15.0% |
!! | TCAAAAGAATTATATTAAGA+TGG | - | chr3_4:35394746-35394765 | None:intergenic | 15.0% |
!! | CACTTATATTCATTAAATAT+AGG | - | chr3_4:35394923-35394942 | None:intergenic | 15.0% |
!! | CTATATTTAATGAATATAAG+TGG | + | chr3_4:35394921-35394940 | Msa0498570:intron | 15.0% |
!!! | TTCTTTAAAAAGTCTAATAA+AGG | - | chr3_4:35395155-35395174 | None:intergenic | 15.0% |
!! | GTTTATACATTTAATGATAT+AGG | + | chr3_4:35396532-35396551 | Msa0498570:intron | 15.0% |
!!! | TTATTTTAACAAAGTTACAA+AGG | + | chr3_4:35396671-35396690 | Msa0498570:intron | 15.0% |
!! | ATTGAAAATCTAAAAATTGA+TGG | + | chr3_4:35396752-35396771 | Msa0498570:intron | 15.0% |
!! | GATGAAAATATTAGATATAA+TGG | - | chr3_4:35397222-35397241 | None:intergenic | 15.0% |
!! | ACAATCTAAATATAATAAGA+TGG | - | chr3_4:35397657-35397676 | None:intergenic | 15.0% |
!! | ATATTTAGATTGTTTATGTA+AGG | + | chr3_4:35397664-35397683 | Msa0498570:intron | 15.0% |
!!! | TTACCATATTTTTTTTTCAA+AGG | + | chr3_4:35397891-35397910 | Msa0498570:intron | 15.0% |
!!! | TAACCTTTGAAAAAAAAATA+TGG | - | chr3_4:35397897-35397916 | None:intergenic | 15.0% |
!!! | TATATATTTTAAATGTTGTC+AGG | + | chr3_4:35398767-35398786 | Msa0498570:intron | 15.0% |
!!! | ATTTGATAACATGTTTTTAA+CGG | + | chr3_4:35399991-35400010 | Msa0498570:intron | 15.0% |
!!! | ACTCTATTGATTATTAAAAA+GGG | - | chr3_4:35400859-35400878 | None:intergenic | 15.0% |
!! | AAAATGAGATTATTTATCAA+AGG | - | chr3_4:35400933-35400952 | None:intergenic | 15.0% |
!!! | CTGATTTTGAATATTATATA+CGG | + | chr3_4:35401052-35401071 | Msa0498570:intron | 15.0% |
!!! | TAACTTTTTTTTTTTTTGCA+CGG | + | chr3_4:35401156-35401175 | Msa0498570:intron | 15.0% |
!! | ATCACTTAATGATAAATATA+TGG | - | chr3_4:35401700-35401719 | None:intergenic | 15.0% |
!! | AATAATTGTGAAATTTCAAT+TGG | - | chr3_4:35401893-35401912 | None:intergenic | 15.0% |
!!! | ACAAGGATTAATAATTTTAT+GGG | - | chr3_4:35401965-35401984 | None:intergenic | 15.0% |
!!! | AACAAGGATTAATAATTTTA+TGG | - | chr3_4:35401966-35401985 | None:intergenic | 15.0% |
!! | AGTTTGGATTAATTAATTAA+TGG | + | chr3_4:35402717-35402736 | Msa0498570:intron | 15.0% |
!! | ATATATGTAAAATGTTTACA+CGG | + | chr3_4:35402834-35402853 | Msa0498570:intron | 15.0% |
!! | AAAATTACACTACTAATTAA+TGG | - | chr3_4:35403057-35403076 | None:intergenic | 15.0% |
!!! | TTTTTTTCTTTTACTATGTT+TGG | + | chr3_4:35403593-35403612 | Msa0498570:intron | 15.0% |
!!! | GTTTTTTGTTTTTTTTCTCA+AGG | - | chr3_4:35391639-35391658 | None:intergenic | 20.0% |
!!! | GAAAATTTAGGTAATGTTTT+TGG | + | chr3_4:35392135-35392154 | Msa0498570:intron | 20.0% |
!!! | CAAAGAAATTATTTTCATTC+TGG | - | chr3_4:35392286-35392305 | None:intergenic | 20.0% |
!! | CAAATATTATCAATGCTAAA+AGG | - | chr3_4:35393017-35393036 | None:intergenic | 20.0% |
!!! | TTTTGTGAATAAAATAAGCT+AGG | + | chr3_4:35393650-35393669 | Msa0498570:intron | 20.0% |
!! | TAATAATTAACAAAATTGGG+TGG | - | chr3_4:35393966-35393985 | None:intergenic | 20.0% |
!! | TCATAGATCATAAACAATTA+TGG | - | chr3_4:35394060-35394079 | None:intergenic | 20.0% |
!!! | ACCTTAAAATTCATTTTTCT+TGG | + | chr3_4:35394649-35394668 | Msa0498570:intron | 20.0% |
!!! | TTAAAATTCATTTTTCTTGG+CGG | + | chr3_4:35394652-35394671 | Msa0498570:intron | 20.0% |
!! | AATAATTAACATACATTCCT+TGG | - | chr3_4:35394890-35394909 | None:intergenic | 20.0% |
!! | GGAATGTATGTTAATTATTT+AGG | + | chr3_4:35394891-35394910 | Msa0498570:intron | 20.0% |
!!! | CTTTTTAAAGAAACAAACAA+TGG | + | chr3_4:35395163-35395182 | Msa0498570:intron | 20.0% |
!!! | TACTTTTATCATCCATTATT+GGG | - | chr3_4:35395197-35395216 | None:intergenic | 20.0% |
!! | TAATTTCGTATTTATGAACT+CGG | - | chr3_4:35396568-35396587 | None:intergenic | 20.0% |
!! | AGTTCATAAATACGAAATTA+GGG | + | chr3_4:35396568-35396587 | Msa0498570:intron | 20.0% |
!! | ATATTTCCATAAACAGAATT+AGG | - | chr3_4:35396726-35396745 | None:intergenic | 20.0% |
!! | AAAATATCAAGAGGAAAAAA+AGG | - | chr3_4:35397102-35397121 | None:intergenic | 20.0% |
!! | AACACAAGAAAAATCTAAAA+GGG | - | chr3_4:35397937-35397956 | None:intergenic | 20.0% |
!! | TAACACAAGAAAAATCTAAA+AGG | - | chr3_4:35397938-35397957 | None:intergenic | 20.0% |
!! | CGCATAAATAAATAAAAATC+TGG | + | chr3_4:35397974-35397993 | Msa0498570:intron | 20.0% |
!! | AATAAATAAAAATCTGGATG+TGG | + | chr3_4:35397980-35397999 | Msa0498570:intron | 20.0% |
!! | ACTTATTTATAACTTATGCA+CGG | + | chr3_4:35398904-35398923 | Msa0498570:CDS | 20.0% |
!!! | TTCCTTGTTATGTAATATTA+AGG | + | chr3_4:35398971-35398990 | Msa0498570:intron | 20.0% |
!! | AACCTTAATATTACATAACA+AGG | - | chr3_4:35398976-35398995 | None:intergenic | 20.0% |
!! | ATAATGAGTTTGATATTCTT+TGG | + | chr3_4:35399640-35399659 | Msa0498570:intron | 20.0% |
!! | ACATGTTATCAAATCAAAAA+AGG | - | chr3_4:35399985-35400004 | None:intergenic | 20.0% |
!! | AAGAAATACTAGTAGTTTAT+AGG | - | chr3_4:35400044-35400063 | None:intergenic | 20.0% |
!!! | TGAAAGAGTTTTAAATATGT+TGG | + | chr3_4:35400134-35400153 | Msa0498570:intron | 20.0% |
!!! | TTTTAAATATGTTGGAATCA+TGG | + | chr3_4:35400142-35400161 | Msa0498570:intron | 20.0% |
!! | TTTAAATATGTTGGAATCAT+GGG | + | chr3_4:35400143-35400162 | Msa0498570:intron | 20.0% |
!!! | AAAAGGGTTAATTATGTTTT+TGG | - | chr3_4:35400629-35400648 | None:intergenic | 20.0% |
!!! | GACTCTATTGATTATTAAAA+AGG | - | chr3_4:35400860-35400879 | None:intergenic | 20.0% |
!!! | TGATAAATAATCTCATTTTC+AGG | + | chr3_4:35400934-35400953 | Msa0498570:intron | 20.0% |
!!! | CTATAAACATGAATTTTTGA+AGG | + | chr3_4:35400959-35400978 | Msa0498570:CDS | 20.0% |
!!! | TATTTAATTCGTTAAGCTTT+TGG | + | chr3_4:35401661-35401680 | Msa0498570:intron | 20.0% |
!!! | ATTTAATTCGTTAAGCTTTT+GGG | + | chr3_4:35401662-35401681 | Msa0498570:intron | 20.0% |
!! | TTAAAGTAGTAACTTTATCT+TGG | + | chr3_4:35401823-35401842 | Msa0498570:intron | 20.0% |
!! | AAAAGTGAAAACAGAATTTA+AGG | + | chr3_4:35402150-35402169 | Msa0498570:CDS | 20.0% |
!! | TAATACTCTCTTAAATATGA+GGG | - | chr3_4:35402931-35402950 | None:intergenic | 20.0% |
!! | ATAATACTCTCTTAAATATG+AGG | - | chr3_4:35402932-35402951 | None:intergenic | 20.0% |
!! | GTTATTATAAGATGTTACTA+GGG | - | chr3_4:35403005-35403024 | None:intergenic | 20.0% |
!! | TGTTATTATAAGATGTTACT+AGG | - | chr3_4:35403006-35403025 | None:intergenic | 20.0% |
!! | TATTGTTCGTCAAAATAATA+AGG | - | chr3_4:35403621-35403640 | None:intergenic | 20.0% |
!!! | CTTTTTTTTAACAGTTTTTG+AGG | + | chr3_4:35403809-35403828 | Msa0498570:intron | 20.0% |
!!! | TTGTATATCTTTTCTTATTC+TGG | + | chr3_4:35404491-35404510 | Msa0498570:intron | 20.0% |
! | TTATTACCTAACGATAGATT+CGG | - | chr3_4:35392097-35392116 | None:intergenic | 25.0% |
!! | AGCTTATGAAGATACAATTT+TGG | - | chr3_4:35392422-35392441 | None:intergenic | 25.0% |
!!! | TACTATTCATAAGCTTGTTA+AGG | - | chr3_4:35392461-35392480 | None:intergenic | 25.0% |
! | AACACCTTATGGAAATAAAT+AGG | - | chr3_4:35392492-35392511 | None:intergenic | 25.0% |
!! | TTCAATGAGAAGTTGATTTA+GGG | - | chr3_4:35392550-35392569 | None:intergenic | 25.0% |
!! | ATCCTGATTTTGTTGAAAAT+TGG | + | chr3_4:35392590-35392609 | Msa0498570:intron | 25.0% |
!! | ATCCAATTTTCAACAAAATC+AGG | - | chr3_4:35392595-35392614 | None:intergenic | 25.0% |
! | GCATAGAAATTAAACTCTAA+GGG | - | chr3_4:35392707-35392726 | None:intergenic | 25.0% |
! | TGCATAGAAATTAAACTCTA+AGG | - | chr3_4:35392708-35392727 | None:intergenic | 25.0% |
!! | TAGAGTTTAATTTCTATGCA+AGG | + | chr3_4:35392708-35392727 | Msa0498570:intron | 25.0% |
! | AAAAGTTTCTATTGATCTGA+CGG | + | chr3_4:35392803-35392822 | Msa0498570:intron | 25.0% |
!!! | TTGTTATTGTGAATTTTGTG+TGG | + | chr3_4:35393519-35393538 | Msa0498570:intron | 25.0% |
!! | ATACTGTCTTGATAGTTATT+TGG | + | chr3_4:35393624-35393643 | Msa0498570:intron | 25.0% |
!! | ATGAGATTTTGTAGAATTTG+AGG | + | chr3_4:35393826-35393845 | Msa0498570:intron | 25.0% |
!! | TGAGATTTTGTAGAATTTGA+GGG | + | chr3_4:35393827-35393846 | Msa0498570:intron | 25.0% |
!! | GATGATATGCTTTTAATGAT+GGG | + | chr3_4:35394197-35394216 | Msa0498570:CDS | 25.0% |
! | ACTAACTTCATAAATATCTG+AGG | + | chr3_4:35394464-35394483 | Msa0498570:intron | 25.0% |
! | GAATTCAGTAATTCATTTGT+TGG | - | chr3_4:35394541-35394560 | None:intergenic | 25.0% |
!! | GCCAAGAAAAATGAATTTTA+AGG | - | chr3_4:35394653-35394672 | None:intergenic | 25.0% |
! | AAAATTGATGCTCAATATAG+TGG | - | chr3_4:35394711-35394730 | None:intergenic | 25.0% |
!!! | CTACTTTTATCATCCATTAT+TGG | - | chr3_4:35395198-35395217 | None:intergenic | 25.0% |
! | ATGGATGATAAAAGTAGATT+TGG | + | chr3_4:35395201-35395220 | Msa0498570:intron | 25.0% |
! | CTGCTAAAAGAATGTAATTA+AGG | - | chr3_4:35395673-35395692 | None:intergenic | 25.0% |
! | AAGAAATGTGTAAAATTCTG+CGG | + | chr3_4:35395782-35395801 | Msa0498570:CDS | 25.0% |
! | TTATATTGCTGAATACTAAG+AGG | - | chr3_4:35395844-35395863 | None:intergenic | 25.0% |
! | TCTTAGTATTCAGCAATATA+AGG | + | chr3_4:35395843-35395862 | Msa0498570:CDS | 25.0% |
!! | TCAGCAATATAAGGTTTTTA+AGG | + | chr3_4:35395852-35395871 | Msa0498570:intron | 25.0% |
!!! | TATCCTTTTTCATTTTATGC+AGG | - | chr3_4:35396259-35396278 | None:intergenic | 25.0% |
!! | ATTTTCCTTACATATGTCAA+AGG | - | chr3_4:35396338-35396357 | None:intergenic | 25.0% |
! | AAAGATTATCATTTGGATGA+GGG | - | chr3_4:35396379-35396398 | None:intergenic | 25.0% |
! | TAAAGATTATCATTTGGATG+AGG | - | chr3_4:35396380-35396399 | None:intergenic | 25.0% |
!! | GTCAAATACATGTTTTACTT+TGG | - | chr3_4:35396437-35396456 | None:intergenic | 25.0% |
!!! | AAAACATGTATTTGACTTGA+TGG | + | chr3_4:35396441-35396460 | Msa0498570:intron | 25.0% |
! | GAGTTCATAAATACGAAATT+AGG | + | chr3_4:35396567-35396586 | Msa0498570:intron | 25.0% |
!! | AAATACGAAATTAGGGTTTT+AGG | + | chr3_4:35396575-35396594 | Msa0498570:intron | 25.0% |
!!! | ATTTTATTTTTGGATGGAAG+AGG | + | chr3_4:35396889-35396908 | Msa0498570:intron | 25.0% |
!!! | ATTTTCATCCCATTTTAAGT+TGG | + | chr3_4:35397233-35397252 | Msa0498570:intron | 25.0% |
!!! | CTTTTGAGTATATGAATGTT+TGG | + | chr3_4:35397307-35397326 | Msa0498570:intron | 25.0% |
! | AAAAATTGGACACCTTTAAA+AGG | - | chr3_4:35397420-35397439 | None:intergenic | 25.0% |
! | AATGTCAAAGATCTAATCTA+AGG | - | chr3_4:35397550-35397569 | None:intergenic | 25.0% |
!!! | TTTTTTAGGCTCATTATCAT+AGG | + | chr3_4:35397603-35397622 | Msa0498570:intron | 25.0% |
!! | TTTTTGAACAACCAACAAAA+TGG | - | chr3_4:35398017-35398036 | None:intergenic | 25.0% |
! | TAACATGCTATATGAAAACA+AGG | + | chr3_4:35398039-35398058 | Msa0498570:intron | 25.0% |
!!! | TTCTTGTTTTCTAGTTATTC+TGG | + | chr3_4:35398495-35398514 | Msa0498570:intron | 25.0% |
!!! | TCTTGTTTTCTAGTTATTCT+GGG | + | chr3_4:35398496-35398515 | Msa0498570:intron | 25.0% |
!!! | ACCTTGTACTTTTTCATATT+TGG | + | chr3_4:35398717-35398736 | Msa0498570:CDS | 25.0% |
!!! | ACTTTTTCATATTTGGCAAA+AGG | + | chr3_4:35398724-35398743 | Msa0498570:CDS | 25.0% |
! | ATCTTTGGATTGTTTATGTA+AGG | - | chr3_4:35399472-35399491 | None:intergenic | 25.0% |
! | TAAACAATCCAAAGATAAGA+AGG | + | chr3_4:35399476-35399495 | Msa0498570:intron | 25.0% |
!!! | TGATGAGTAATCTATTTCTA+TGG | - | chr3_4:35399801-35399820 | None:intergenic | 25.0% |
! | AATGCCACATTATTAAGTAA+AGG | + | chr3_4:35400452-35400471 | Msa0498570:intron | 25.0% |
!!! | GTTGACATTTTTAAGTTATG+TGG | - | chr3_4:35400478-35400497 | None:intergenic | 25.0% |
! | ATATACAGAGATATCGAAAA+GGG | - | chr3_4:35400645-35400664 | None:intergenic | 25.0% |
! | AATATACAGAGATATCGAAA+AGG | - | chr3_4:35400646-35400665 | None:intergenic | 25.0% |
! | GAATTTAATACAGCAAAAAG+TGG | + | chr3_4:35400700-35400719 | Msa0498570:intron | 25.0% |
! | AAAGTTATTGATATCAAACG+AGG | - | chr3_4:35401143-35401162 | None:intergenic | 25.0% |
!!! | TTATAAACTTTTTGAGAGTG+TGG | - | chr3_4:35401271-35401290 | None:intergenic | 25.0% |
! | ACTAGCAATACTTAACATAT+TGG | - | chr3_4:35401314-35401333 | None:intergenic | 25.0% |
!!! | TTCTCAATAAGTTTTATTCG+AGG | - | chr3_4:35401509-35401528 | None:intergenic | 25.0% |
! | TCGAATAAAACTTATTGAGA+AGG | + | chr3_4:35401508-35401527 | Msa0498570:CDS | 25.0% |
!! | TTTAATTCGTTAAGCTTTTG+GGG | + | chr3_4:35401663-35401682 | Msa0498570:intron | 25.0% |
! | ACTAGCTGTTGAATAAAATT+AGG | + | chr3_4:35401760-35401779 | Msa0498570:intron | 25.0% |
! | CTAGCTGTTGAATAAAATTA+GGG | + | chr3_4:35401761-35401780 | Msa0498570:intron | 25.0% |
! | TGTGAAATTTCAATTGGAAA+GGG | - | chr3_4:35401887-35401906 | None:intergenic | 25.0% |
! | TTGTGAAATTTCAATTGGAA+AGG | - | chr3_4:35401888-35401907 | None:intergenic | 25.0% |
! | AATGGTTAAGGAATCAAAAA+AGG | - | chr3_4:35401917-35401936 | None:intergenic | 25.0% |
! | AATATTCATGCATTCAATCA+AGG | + | chr3_4:35401991-35402010 | Msa0498570:intron | 25.0% |
! | ATATTCATGCATTCAATCAA+GGG | + | chr3_4:35401992-35402011 | Msa0498570:intron | 25.0% |
! | TATACTTGAATCCACAAAAA+TGG | - | chr3_4:35402080-35402099 | None:intergenic | 25.0% |
! | TACACAAATCATTCATTCAA+AGG | - | chr3_4:35402232-35402251 | None:intergenic | 25.0% |
! | ACAATGTGAAACAAACAAAT+AGG | + | chr3_4:35402264-35402283 | Msa0498570:intron | 25.0% |
!!! | ACATTCTAAAACTTACCTAT+TGG | - | chr3_4:35402462-35402481 | None:intergenic | 25.0% |
!! | CGTATCTTTTTCTTTAATAG+TGG | + | chr3_4:35402509-35402528 | Msa0498570:intron | 25.0% |
!!! | TGAATCTATGGAGTTTTAAA+AGG | + | chr3_4:35402609-35402628 | Msa0498570:intron | 25.0% |
!! | GATCCTCTCAATTTTATATT+CGG | + | chr3_4:35402645-35402664 | Msa0498570:intron | 25.0% |
! | TAACCGAATATAAAATTGAG+AGG | - | chr3_4:35402651-35402670 | None:intergenic | 25.0% |
!!! | CTTATTTTAGAATCTCTCAA+TGG | + | chr3_4:35403129-35403148 | Msa0498570:intron | 25.0% |
! | TTTGATATAACATAAACAGC+TGG | - | chr3_4:35403194-35403213 | None:intergenic | 25.0% |
! | CAAAATTGCAAAGTATAAAC+TGG | - | chr3_4:35403290-35403309 | None:intergenic | 25.0% |
!! | CAGTTTATACTTTGCAATTT+TGG | + | chr3_4:35403288-35403307 | Msa0498570:intron | 25.0% |
! | TTCAATAACTAATGCTCTAA+AGG | - | chr3_4:35403346-35403365 | None:intergenic | 25.0% |
!! | CTCCTTAACCAATATATTTT+GGG | + | chr3_4:35403479-35403498 | Msa0498570:intron | 25.0% |
!! | ATAAAGTGCCCAAAATATAT+TGG | - | chr3_4:35403490-35403509 | None:intergenic | 25.0% |
!!! | AATATATTTTGGGCACTTTA+TGG | + | chr3_4:35403489-35403508 | Msa0498570:intron | 25.0% |
! | ATGAAGAACAAAAATTGAAC+TGG | - | chr3_4:35403890-35403909 | None:intergenic | 25.0% |
!! | GATACATTATTGATTGTTTG+AGG | + | chr3_4:35403954-35403973 | Msa0498570:intron | 25.0% |
!!! | TAATTGTTTTCAAAAAGCAC+CGG | - | chr3_4:35404150-35404169 | None:intergenic | 25.0% |
! | TTAGAGAAAATAGAAAGACA+TGG | + | chr3_4:35404300-35404319 | Msa0498570:intron | 25.0% |
! | TTGAATTACAAACTACACAA+CGG | + | chr3_4:35404334-35404353 | Msa0498570:intron | 25.0% |
! | ATCGAAAATAAATAGGAAAG+CGG | - | chr3_4:35404717-35404736 | None:intergenic | 25.0% |
! | CGAATTGATCGAAAATAAAT+AGG | - | chr3_4:35404724-35404743 | None:intergenic | 25.0% |
! | TTAAAAATGTACCTTATCTG+AGG | + | chr3_4:35404766-35404785 | Msa0498570:three_prime_UTR | 25.0% |
!! | TTTTTCGTGTTTATATTGCT+TGG | + | chr3_4:35404854-35404873 | Msa0498570:three_prime_UTR | 25.0% |
!! | GTTATTGTGAGTTTTGATCA+AGG | - | chr3_4:35391683-35391702 | None:intergenic | 30.0% |
!!! | AGGTAATGTTTTTGGAATTG+AGG | + | chr3_4:35392143-35392162 | Msa0498570:intron | 30.0% |
!!! | GGTAATGTTTTTGGAATTGA+GGG | + | chr3_4:35392144-35392163 | Msa0498570:intron | 30.0% |
!!! | GGGATTGTTTTTGTTTGTTA+TGG | + | chr3_4:35392164-35392183 | Msa0498570:intron | 30.0% |
CAAGCCTATTTATTTCCATA+AGG | + | chr3_4:35392485-35392504 | Msa0498570:intron | 30.0% | |
AAAAGTAAGCCAATCCAAAT+GGG | + | chr3_4:35392524-35392543 | Msa0498570:intron | 30.0% | |
! | CTTCAATGAGAAGTTGATTT+AGG | - | chr3_4:35392551-35392570 | None:intergenic | 30.0% |
ACGGTTGTGATTAACTAAAA+GGG | + | chr3_4:35392829-35392848 | Msa0498570:intron | 30.0% | |
!! | GAATCAGTTGTTTTGTATTG+CGG | + | chr3_4:35393123-35393142 | Msa0498570:CDS | 30.0% |
! | ATTGTGAATTTTGTGTGGTT+TGG | + | chr3_4:35393524-35393543 | Msa0498570:intron | 30.0% |
TTGTAGACTTACATGTTTCT+AGG | + | chr3_4:35393568-35393587 | Msa0498570:intron | 30.0% | |
ATGCTTAAGATTTGTGTTTG+TGG | + | chr3_4:35393874-35393893 | Msa0498570:intron | 30.0% | |
TGCTTAAGATTTGTGTTTGT+GGG | + | chr3_4:35393875-35393894 | Msa0498570:intron | 30.0% | |
ATAAATTATAGACCTGACAG+CGG | - | chr3_4:35394103-35394122 | None:intergenic | 30.0% | |
! | GGATGATATGCTTTTAATGA+TGG | + | chr3_4:35394196-35394215 | Msa0498570:CDS | 30.0% |
!! | GAATTATTGGTTCGTCATAA+AGG | - | chr3_4:35394247-35394266 | None:intergenic | 30.0% |
CACTCAGGAATAAGAATTAT+TGG | - | chr3_4:35394260-35394279 | None:intergenic | 30.0% | |
AATTGTGAAGATTGAAACTG+TGG | - | chr3_4:35394342-35394361 | None:intergenic | 30.0% | |
ACAGTTTCAATCTTCACAAT+TGG | + | chr3_4:35394341-35394360 | Msa0498570:CDS | 30.0% | |
TAGTCTACAAACTTAAGATG+TGG | + | chr3_4:35394580-35394599 | Msa0498570:intron | 30.0% | |
GTTTGATCATTATTCTCCAT+TGG | + | chr3_4:35394679-35394698 | Msa0498570:intron | 30.0% | |
!!! | AATATAGTGGTTTTAGCCAA+TGG | - | chr3_4:35394698-35394717 | None:intergenic | 30.0% |
TAGATTCTGTTGTGTAAATC+GGG | - | chr3_4:35394962-35394981 | None:intergenic | 30.0% | |
CTAGATTCTGTTGTGTAAAT+CGG | - | chr3_4:35394963-35394982 | None:intergenic | 30.0% | |
TTTACACAACAGAATCTAGT+TGG | + | chr3_4:35394964-35394983 | Msa0498570:intron | 30.0% | |
AACAGAATCTAGTTGGATAT+TGG | + | chr3_4:35394971-35394990 | Msa0498570:intron | 30.0% | |
! | TAGATTTGGTTGATTGAGTA+TGG | + | chr3_4:35395215-35395234 | Msa0498570:intron | 30.0% |
!! | CTCTATTTAGTTCTACATAG+AGG | + | chr3_4:35395250-35395269 | Msa0498570:intron | 30.0% |
GGGAATGATGATAAGAAAAT+CGG | - | chr3_4:35395443-35395462 | None:intergenic | 30.0% | |
AAATCAAGCTTACCTACAAA+AGG | - | chr3_4:35395599-35395618 | None:intergenic | 30.0% | |
! | GCTTGATTTGAATTATCTGT+TGG | + | chr3_4:35395610-35395629 | Msa0498570:intron | 30.0% |
! | TTCTTTTAGCAGTGAAAGTT+TGG | + | chr3_4:35395681-35395700 | Msa0498570:intron | 30.0% |
! | TAATGATATCCAGTTGACTT+TGG | + | chr3_4:35395733-35395752 | Msa0498570:intron | 30.0% |
! | GCAGAATTTTACACATTTCT+TGG | - | chr3_4:35395783-35395802 | None:intergenic | 30.0% |
AGAAATGTGTAAAATTCTGC+GGG | + | chr3_4:35395783-35395802 | Msa0498570:CDS | 30.0% | |
TTGATTCATTCCGAGATATT+CGG | - | chr3_4:35396016-35396035 | None:intergenic | 30.0% | |
CAATCTTGTATTTGATCAGT+TGG | - | chr3_4:35396091-35396110 | None:intergenic | 30.0% | |
GATCCTGCATAAAATGAAAA+AGG | + | chr3_4:35396253-35396272 | Msa0498570:intron | 30.0% | |
CAAACAACAAAGCATGAATA+AGG | + | chr3_4:35396281-35396300 | Msa0498570:intron | 30.0% | |
CTTACATATGTCAAAGGATT+GGG | - | chr3_4:35396332-35396351 | None:intergenic | 30.0% | |
! | TTTACTTTGGTGCATTTGAT+TGG | - | chr3_4:35396424-35396443 | None:intergenic | 30.0% |
!! | TGTATTTGACTTGATGGTTA+CGG | + | chr3_4:35396447-35396466 | Msa0498570:intron | 30.0% |
CTTCTCATCTACTTAATACA+CGG | + | chr3_4:35396487-35396506 | Msa0498570:intron | 30.0% | |
TATACACTACAGTACAGATA+CGG | + | chr3_4:35396626-35396645 | Msa0498570:intron | 30.0% | |
GTTTGTCCTAATTCTGTTTA+TGG | + | chr3_4:35396717-35396736 | Msa0498570:intron | 30.0% | |
CAACAAATAACAATGTTGCA+AGG | + | chr3_4:35396778-35396797 | Msa0498570:intron | 30.0% | |
GAAGAGGAAAAAACAATTGT+TGG | + | chr3_4:35396905-35396924 | Msa0498570:intron | 30.0% | |
AGGAAAAAACAATTGTTGGT+TGG | + | chr3_4:35396909-35396928 | Msa0498570:intron | 30.0% | |
! | GGAAAAAACAATTGTTGGTT+GGG | + | chr3_4:35396910-35396929 | Msa0498570:intron | 30.0% |
ATATCAAGAGGAAAAAAAGG+CGG | - | chr3_4:35397099-35397118 | None:intergenic | 30.0% | |
CTTGAGTAGAAAATATCAAG+AGG | - | chr3_4:35397111-35397130 | None:intergenic | 30.0% | |
!!! | GCATAGAGTTTTGAGAAAAA+TGG | - | chr3_4:35397174-35397193 | None:intergenic | 30.0% |
GAACTCTTCCAACTTAAAAT+GGG | - | chr3_4:35397244-35397263 | None:intergenic | 30.0% | |
AGAACTCTTCCAACTTAAAA+TGG | - | chr3_4:35397245-35397264 | None:intergenic | 30.0% | |
TACTCAAAAGAACAGTTCAA+AGG | - | chr3_4:35397297-35397316 | None:intergenic | 30.0% | |
ATATGAATGTTTGGTCTATC+AGG | + | chr3_4:35397316-35397335 | Msa0498570:intron | 30.0% | |
! | CAAAGATCTAATCTAAGGTT+AGG | - | chr3_4:35397545-35397564 | None:intergenic | 30.0% |
!!! | TGCCTCTTATCATGTTTTTT+AGG | + | chr3_4:35397589-35397608 | Msa0498570:intron | 30.0% |
AGCCTAAAAAACATGATAAG+AGG | - | chr3_4:35397594-35397613 | None:intergenic | 30.0% | |
AGTCTAACTACTTCTCTTAT+AGG | + | chr3_4:35397808-35397827 | Msa0498570:intron | 30.0% | |
!! | TTTGTTGACTACTTTTGTGT+AGG | + | chr3_4:35398182-35398201 | Msa0498570:intron | 30.0% |
CTGGGTACATGTTAAATTAA+TGG | + | chr3_4:35398514-35398533 | Msa0498570:intron | 30.0% | |
TCTCATCAATTCTCATGTTT+AGG | + | chr3_4:35398616-35398635 | Msa0498570:intron | 30.0% | |
! | GAAAAAGTACAAGGTAAACA+AGG | - | chr3_4:35398712-35398731 | None:intergenic | 30.0% |
! | GCCAAATATGAAAAAGTACA+AGG | - | chr3_4:35398721-35398740 | None:intergenic | 30.0% |
! | TCATATTTGGCAAAAGGTAT+TGG | + | chr3_4:35398730-35398749 | Msa0498570:CDS | 30.0% |
!! | CCTTTTGAAAAATGGTTCAA+TGG | - | chr3_4:35398936-35398955 | None:intergenic | 30.0% |
!! | CCATTGAACCATTTTTCAAA+AGG | + | chr3_4:35398933-35398952 | Msa0498570:intron | 30.0% |
TATGATAGAAGTAGAAGTTC+AGG | + | chr3_4:35399098-35399117 | Msa0498570:intron | 30.0% | |
CATTGAACAAGTGTTAGAAA+GGG | - | chr3_4:35399163-35399182 | None:intergenic | 30.0% | |
TCATTGAACAAGTGTTAGAA+AGG | - | chr3_4:35399164-35399183 | None:intergenic | 30.0% | |
AAAGTTTATTTGCTCATACC+CGG | + | chr3_4:35399188-35399207 | Msa0498570:intron | 30.0% | |
TAGCTTCATATTTCAGAGAA+TGG | - | chr3_4:35399252-35399271 | None:intergenic | 30.0% | |
! | GAATGTCTAAATCTGTTTCT+TGG | + | chr3_4:35399272-35399291 | Msa0498570:intron | 30.0% |
ACATACATCATATTCTACAG+CGG | - | chr3_4:35399357-35399376 | None:intergenic | 30.0% | |
ACACTTCTATATTGCTATGA+GGG | - | chr3_4:35399382-35399401 | None:intergenic | 30.0% | |
! | CTAAGTACTCTATTTTGTCA+AGG | - | chr3_4:35399422-35399441 | None:intergenic | 30.0% |
TTTAGTCATGGTGAAATTGT+CGG | + | chr3_4:35399717-35399736 | Msa0498570:intron | 30.0% | |
AATCAATGCAATTTAGAAGC+AGG | + | chr3_4:35399863-35399882 | Msa0498570:intron | 30.0% | |
!! | CTAGTAGTTTATAGGTTGAT+GGG | - | chr3_4:35400036-35400055 | None:intergenic | 30.0% |
! | ACTAGTAGTTTATAGGTTGA+TGG | - | chr3_4:35400037-35400056 | None:intergenic | 30.0% |
GTTTCAATTTCTGTCATTCT+AGG | + | chr3_4:35400338-35400357 | Msa0498570:intron | 30.0% | |
ATTCTATGAAGGACTAAAAG+TGG | + | chr3_4:35400544-35400563 | Msa0498570:intron | 30.0% | |
TTCTATGAAGGACTAAAAGT+GGG | + | chr3_4:35400545-35400564 | Msa0498570:intron | 30.0% | |
!!! | AAAAAGTGGACTAGTGTTTT+GGG | + | chr3_4:35400714-35400733 | Msa0498570:intron | 30.0% |
GTTAAGATTTAATATCGCTC+CGG | + | chr3_4:35400789-35400808 | Msa0498570:intron | 30.0% | |
AGTTGCATTTCCTTGTAATA+GGG | + | chr3_4:35401092-35401111 | Msa0498570:intron | 30.0% | |
AATACTTAACATATTGGCAC+TGG | - | chr3_4:35401308-35401327 | None:intergenic | 30.0% | |
!! | ATTCTGAAATTAATCCATGC+AGG | + | chr3_4:35401403-35401422 | Msa0498570:intron | 30.0% |
! | TTCTTCTTTGGAAAGAATCA+TGG | + | chr3_4:35401435-35401454 | Msa0498570:CDS | 30.0% |
! | TCTTCTTTGGAAAGAATCAT+GGG | + | chr3_4:35401436-35401455 | Msa0498570:CDS | 30.0% |
! | GGTTTCTGCAAAAAGATTTT+GGG | - | chr3_4:35401534-35401553 | None:intergenic | 30.0% |
! | TGGTTTCTGCAAAAAGATTT+TGG | - | chr3_4:35401535-35401554 | None:intergenic | 30.0% |
! | AAATCTTTTTGCAGAAACCA+AGG | + | chr3_4:35401535-35401554 | Msa0498570:CDS | 30.0% |
GCATGAATATTTAGTCAACA+AGG | - | chr3_4:35401982-35402001 | None:intergenic | 30.0% | |
! | GTGAAAACAGAATTTAAGGT+TGG | + | chr3_4:35402154-35402173 | Msa0498570:intron | 30.0% |
! | TGAACTGATTTATACAGAAG+CGG | - | chr3_4:35402310-35402329 | None:intergenic | 30.0% |
! | CTCCTTCGAAAATTTTTCTA+GGG | - | chr3_4:35402430-35402449 | None:intergenic | 30.0% |
! | TCTCCTTCGAAAATTTTTCT+AGG | - | chr3_4:35402431-35402450 | None:intergenic | 30.0% |
!! | TTCTAAAACTTACCTATTGG+AGG | - | chr3_4:35402459-35402478 | None:intergenic | 30.0% |
! | ACTAGACTAACCATCTTTTT+AGG | + | chr3_4:35402679-35402698 | Msa0498570:intron | 30.0% |
AAAGCTCATAAACTCAAGAA+AGG | + | chr3_4:35402971-35402990 | Msa0498570:intron | 30.0% | |
! | TTTGCAATTTTGGATACCTA+TGG | + | chr3_4:35403298-35403317 | Msa0498570:intron | 30.0% |
! | GCTCCTTAACCAATATATTT+TGG | + | chr3_4:35403478-35403497 | Msa0498570:intron | 30.0% |
! | TGCCCAAAATATATTGGTTA+AGG | - | chr3_4:35403484-35403503 | None:intergenic | 30.0% |
CGTCTCTTTCATAATTCATA+GGG | - | chr3_4:35403520-35403539 | None:intergenic | 30.0% | |
TCATGATGAACATTACAAGA+GGG | - | chr3_4:35403562-35403581 | None:intergenic | 30.0% | |
TTCATGATGAACATTACAAG+AGG | - | chr3_4:35403563-35403582 | None:intergenic | 30.0% | |
TAATGTTCATCATGAAGTAG+TGG | + | chr3_4:35403567-35403586 | Msa0498570:intron | 30.0% | |
TTCATGTTATTAGTTGAACC+AGG | + | chr3_4:35403925-35403944 | Msa0498570:intron | 30.0% | |
TCATGTTATTAGTTGAACCA+GGG | + | chr3_4:35403926-35403945 | Msa0498570:intron | 30.0% | |
! | TCATTTTAGACGAAAAAGTG+AGG | - | chr3_4:35404035-35404054 | None:intergenic | 30.0% |
!! | CATATTGTAGGCTTTATTTC+TGG | - | chr3_4:35404092-35404111 | None:intergenic | 30.0% |
!!! | AATTGTTTTCAAAAAGCACC+GGG | - | chr3_4:35404149-35404168 | None:intergenic | 30.0% |
! | CTCTAATTTGTGCTACAAAT+TGG | - | chr3_4:35404245-35404264 | None:intergenic | 30.0% |
AAGAGGGGGATAAAAAAAAA+GGG | - | chr3_4:35404812-35404831 | None:intergenic | 30.0% | |
TAAGAGGGGGATAAAAAAAA+AGG | - | chr3_4:35404813-35404832 | None:intergenic | 30.0% | |
!!! | GTTTTTTTTCTCAAGGGTCT+TGG | - | chr3_4:35391632-35391651 | None:intergenic | 35.0% |
!! | ATTGTGAGTTTTGATCAAGG+TGG | - | chr3_4:35391680-35391699 | None:intergenic | 35.0% |
ATTGAACCGAATCTATCGTT+AGG | + | chr3_4:35392088-35392107 | Msa0498570:CDS | 35.0% | |
TGACTTTATGCGAAGCTAAT+TGG | + | chr3_4:35392331-35392350 | Msa0498570:intron | 35.0% | |
TTATGCGAAGCTAATTGGAT+TGG | + | chr3_4:35392336-35392355 | Msa0498570:intron | 35.0% | |
AGCTTATGCAAAACACCTTA+TGG | - | chr3_4:35392503-35392522 | None:intergenic | 35.0% | |
CAAAAGTAAGCCAATCCAAA+TGG | + | chr3_4:35392523-35392542 | Msa0498570:intron | 35.0% | |
TTACAGCGTCTTTCATGAAA+GGG | - | chr3_4:35392636-35392655 | None:intergenic | 35.0% | |
! | TCTAAAGTCGCATACATGAT+TGG | - | chr3_4:35392771-35392790 | None:intergenic | 35.0% |
AATCATGTATGCGACTTTAG+AGG | + | chr3_4:35392770-35392789 | Msa0498570:intron | 35.0% | |
GACGGTTGTGATTAACTAAA+AGG | + | chr3_4:35392828-35392847 | Msa0498570:intron | 35.0% | |
AAATGGCGTCGTTTGTATAA+CGG | + | chr3_4:35393096-35393115 | Msa0498570:CDS | 35.0% | |
!! | GGATTTTAAAAACCCTAACG+CGG | + | chr3_4:35393144-35393163 | Msa0498570:CDS | 35.0% |
!! | ACATGTTTCTAGGATCTTGT+AGG | + | chr3_4:35393578-35393597 | Msa0498570:intron | 35.0% |
TAAAACACCAACACAACATG+TGG | - | chr3_4:35393769-35393788 | None:intergenic | 35.0% | |
!! | CTTATGTAGCATTGACACTT+AGG | - | chr3_4:35393794-35393813 | None:intergenic | 35.0% |
GCTTAAGATTTGTGTTTGTG+GGG | + | chr3_4:35393876-35393895 | Msa0498570:intron | 35.0% | |
CATGTGTAAGTGGCAAAAAA+GGG | + | chr3_4:35394010-35394029 | Msa0498570:intron | 35.0% | |
!! | TATTGGTTCGTCATAAAGGT+AGG | - | chr3_4:35394243-35394262 | None:intergenic | 35.0% |
GATATTGTCCAATGCTAGTA+TGG | + | chr3_4:35394292-35394311 | Msa0498570:CDS | 35.0% | |
CAGAAATTCCATACTAGCAT+TGG | - | chr3_4:35394303-35394322 | None:intergenic | 35.0% | |
CTAGTATGGAATTTCTGCAA+CGG | + | chr3_4:35394306-35394325 | Msa0498570:CDS | 35.0% | |
TAGTATGGAATTTCTGCAAC+GGG | + | chr3_4:35394307-35394326 | Msa0498570:CDS | 35.0% | |
!! | ACGCGTTAGATCATTTTGAT+AGG | + | chr3_4:35394393-35394412 | Msa0498570:CDS | 35.0% |
TCATGCATTAGTAAGAGAAC+AGG | - | chr3_4:35394445-35394464 | None:intergenic | 35.0% | |
! | CAGTAATTCATTTGTTGGCA+AGG | - | chr3_4:35394536-35394555 | None:intergenic | 35.0% |
ACAAACTTAAGATGTGGAGT+AGG | + | chr3_4:35394586-35394605 | Msa0498570:intron | 35.0% | |
CAAACTTAAGATGTGGAGTA+GGG | + | chr3_4:35394587-35394606 | Msa0498570:intron | 35.0% | |
! | GGAAATACTGCATAGTTTGT+GGG | + | chr3_4:35394608-35394627 | Msa0498570:intron | 35.0% |
TACATAGAGGAAAACGATGA+AGG | + | chr3_4:35395263-35395282 | Msa0498570:intron | 35.0% | |
! | TTTTCTTATCATCATTCCCC+AGG | + | chr3_4:35395444-35395463 | Msa0498570:intron | 35.0% |
! | TCTCAAATTTTCATCTGCCT+GGG | - | chr3_4:35395464-35395483 | None:intergenic | 35.0% |
! | ATCTCAAATTTTCATCTGCC+TGG | - | chr3_4:35395465-35395484 | None:intergenic | 35.0% |
! | TGTTTTCTGATATTCGCTCT+CGG | + | chr3_4:35395710-35395729 | Msa0498570:intron | 35.0% |
AAAAAAAGGCAGAAAAGTCC+AGG | - | chr3_4:35396174-35396193 | None:intergenic | 35.0% | |
CCTTACATATGTCAAAGGAT+TGG | - | chr3_4:35396333-35396352 | None:intergenic | 35.0% | |
CCAATCCTTTGACATATGTA+AGG | + | chr3_4:35396330-35396349 | Msa0498570:intron | 35.0% | |
ACAATGTTGCAAGGTTGTAA+TGG | + | chr3_4:35396787-35396806 | Msa0498570:intron | 35.0% | |
CAATGTTGCAAGGTTGTAAT+GGG | + | chr3_4:35396788-35396807 | Msa0498570:intron | 35.0% | |
! | GGTTGTAATGGGAAAATATG+AGG | + | chr3_4:35396799-35396818 | Msa0498570:intron | 35.0% |
GGGAAAATATGAGGTGAATT+AGG | + | chr3_4:35396808-35396827 | Msa0498570:intron | 35.0% | |
ACAAAGGTAACAGCAGTTAA+AGG | + | chr3_4:35396941-35396960 | Msa0498570:intron | 35.0% | |
TAACAGCAGTTAAAGGATCA+AGG | + | chr3_4:35396948-35396967 | Msa0498570:intron | 35.0% | |
AATGGAAGAAGCAATGAATG+AGG | - | chr3_4:35397156-35397175 | None:intergenic | 35.0% | |
TCAAAAGAACAGTTCAAAGG+TGG | - | chr3_4:35397294-35397313 | None:intergenic | 35.0% | |
GTTTCATATGCCAATACTTC+TGG | + | chr3_4:35397369-35397388 | Msa0498570:intron | 35.0% | |
! | ACATGTCAGACACCTTTTAA+AGG | + | chr3_4:35397405-35397424 | Msa0498570:intron | 35.0% |
! | TCTTAGTACACCTTTTTGTC+AGG | + | chr3_4:35397857-35397876 | Msa0498570:intron | 35.0% |
! | CTTAGTACACCTTTTTGTCA+GGG | + | chr3_4:35397858-35397877 | Msa0498570:intron | 35.0% |
TCTAGATTACCCTGACAAAA+AGG | - | chr3_4:35397870-35397889 | None:intergenic | 35.0% | |
! | AATCTCTAGAAGAGTAGCAT+CGG | - | chr3_4:35398262-35398281 | None:intergenic | 35.0% |
TCTAGAGATTCTGCTTGATA+AGG | + | chr3_4:35398272-35398291 | Msa0498570:CDS | 35.0% | |
ATTGTAACAGAGCATGAAGA+GGG | - | chr3_4:35398307-35398326 | None:intergenic | 35.0% | |
! | TCTCAGTTAAAAGTGTGCAA+AGG | + | chr3_4:35398369-35398388 | Msa0498570:intron | 35.0% |
ATTCCACCTGTTTAGATGAA+CGG | - | chr3_4:35398476-35398495 | None:intergenic | 35.0% | |
!! | AAAGGTATTGGATTCTGGAA+AGG | + | chr3_4:35398742-35398761 | Msa0498570:CDS | 35.0% |
TGTCAGGTTTGTGATGTATA+TGG | + | chr3_4:35398783-35398802 | Msa0498570:intron | 35.0% | |
! | TTCTTGTTATGATGATGCAG+AGG | + | chr3_4:35398832-35398851 | Msa0498570:intron | 35.0% |
!! | CTGTCTTGCCTTTTGAAAAA+TGG | - | chr3_4:35398944-35398963 | None:intergenic | 35.0% |
!! | CATTTTTCAAAAGGCAAGAC+AGG | + | chr3_4:35398942-35398961 | Msa0498570:intron | 35.0% |
ACCATAACTTATGTCATTCC+GGG | - | chr3_4:35399209-35399228 | None:intergenic | 35.0% | |
GACCATAACTTATGTCATTC+CGG | - | chr3_4:35399210-35399229 | None:intergenic | 35.0% | |
TGACATAAGTTATGGTCCAA+AGG | + | chr3_4:35399213-35399232 | Msa0498570:intron | 35.0% | |
ACACTTTGACTATGGAAAAG+GGG | - | chr3_4:35399325-35399344 | None:intergenic | 35.0% | |
CACACTTTGACTATGGAAAA+GGG | - | chr3_4:35399326-35399345 | None:intergenic | 35.0% | |
GACACTTCTATATTGCTATG+AGG | - | chr3_4:35399383-35399402 | None:intergenic | 35.0% | |
ACAATCCAAAGATAAGAAGG+TGG | + | chr3_4:35399479-35399498 | Msa0498570:intron | 35.0% | |
ATGATCCACCTTCTTATCTT+TGG | - | chr3_4:35399487-35399506 | None:intergenic | 35.0% | |
ATACCTATTACTGGATGTGA+TGG | + | chr3_4:35399612-35399631 | Msa0498570:intron | 35.0% | |
GTTTGATATTCTTTGGCAGA+AGG | + | chr3_4:35399647-35399666 | Msa0498570:intron | 35.0% | |
AAACAAATTGCAGACATTGC+AGG | + | chr3_4:35399670-35399689 | Msa0498570:intron | 35.0% | |
ACTGGATGGTTATTTAGTCA+TGG | + | chr3_4:35399705-35399724 | Msa0498570:intron | 35.0% | |
CTATTTCAAGAATGTTCAGG+AGG | - | chr3_4:35399758-35399777 | None:intergenic | 35.0% | |
! | CAGCTATTTCAAGAATGTTC+AGG | - | chr3_4:35399761-35399780 | None:intergenic | 35.0% |
CTGAACATTCTTGAAATAGC+TGG | + | chr3_4:35399759-35399778 | Msa0498570:intron | 35.0% | |
TTGGGAAATAGAGAGTAGTA+GGG | + | chr3_4:35399928-35399947 | Msa0498570:intron | 35.0% | |
!! | TATGAAGTGTTGCTAGAAAG+TGG | - | chr3_4:35400072-35400091 | None:intergenic | 35.0% |
ATGAAGTGTATGATGCAACA+CGG | + | chr3_4:35400091-35400110 | Msa0498570:intron | 35.0% | |
TATGTTGGAATCATGGGTTT+AGG | + | chr3_4:35400149-35400168 | Msa0498570:intron | 35.0% | |
TTAAATCGAGAGAGGAAGAT+AGG | - | chr3_4:35400228-35400247 | None:intergenic | 35.0% | |
TCTTCCTCTCTCGATTTAAT+TGG | + | chr3_4:35400229-35400248 | Msa0498570:intron | 35.0% | |
ATCACCAATTAAATCGAGAG+AGG | - | chr3_4:35400236-35400255 | None:intergenic | 35.0% | |
TCTTGAGGAAATTGTTTCCA+TGG | + | chr3_4:35400303-35400322 | Msa0498570:intron | 35.0% | |
GTGGCCTTTACTTAATAATG+TGG | - | chr3_4:35400459-35400478 | None:intergenic | 35.0% | |
TGGGAGAATCTTAAATGACA+GGG | + | chr3_4:35400564-35400583 | Msa0498570:intron | 35.0% | |
!!! | CAAAAAGTGGACTAGTGTTT+TGG | + | chr3_4:35400713-35400732 | Msa0498570:intron | 35.0% |
TAGAGATGAGTGAAATGCAA+TGG | + | chr3_4:35400767-35400786 | Msa0498570:intron | 35.0% | |
ATGGACAGAGATTCATAAAC+CGG | - | chr3_4:35400811-35400830 | None:intergenic | 35.0% | |
AAGGACTTCTTCTTATCAAC+AGG | + | chr3_4:35400978-35400997 | Msa0498570:CDS | 35.0% | |
AGGACTTCTTCTTATCAACA+GGG | + | chr3_4:35400979-35400998 | Msa0498570:CDS | 35.0% | |
CAGTTGCATTTCCTTGTAAT+AGG | + | chr3_4:35401091-35401110 | Msa0498570:intron | 35.0% | |
!!! | TTATGCCTTCTTTTTTTGCG+CGG | + | chr3_4:35401226-35401245 | Msa0498570:intron | 35.0% |
!! | CATGCTTTCCATTTTAGTAC+TGG | + | chr3_4:35401367-35401386 | Msa0498570:intron | 35.0% |
CCTAACTTCCAGTACTAAAA+TGG | - | chr3_4:35401378-35401397 | None:intergenic | 35.0% | |
!! | CCATTTTAGTACTGGAAGTT+AGG | + | chr3_4:35401375-35401394 | Msa0498570:intron | 35.0% |
AAATTAATCCATGCAGGATG+TGG | + | chr3_4:35401409-35401428 | Msa0498570:intron | 35.0% | |
GGAACTTGAAAAAAATCCCA+TGG | + | chr3_4:35401457-35401476 | Msa0498570:CDS | 35.0% | |
! | TGATTCAAAGGTATGTTCCT+TGG | - | chr3_4:35401555-35401574 | None:intergenic | 35.0% |
GGAACATACCTTTGAATCAA+AGG | + | chr3_4:35401556-35401575 | Msa0498570:CDS | 35.0% | |
!! | AGGAGCATGCAAAACTTTTA+AGG | + | chr3_4:35401585-35401604 | Msa0498570:CDS | 35.0% |
TTTCTTATCAAGTGCCCTTA+GGG | - | chr3_4:35401802-35401821 | None:intergenic | 35.0% | |
CAAGTATAAGTGACACAATC+CGG | + | chr3_4:35402092-35402111 | Msa0498570:CDS | 35.0% | |
TGGTACTTGAACCTTGATTA+TGG | + | chr3_4:35402174-35402193 | Msa0498570:intron | 35.0% | |
CCTTCAAAGAACCATAATCA+AGG | - | chr3_4:35402188-35402207 | None:intergenic | 35.0% | |
CCTTGATTATGGTTCTTTGA+AGG | + | chr3_4:35402185-35402204 | Msa0498570:intron | 35.0% | |
TGATTTATACAGAAGCGGTA+GGG | - | chr3_4:35402305-35402324 | None:intergenic | 35.0% | |
! | TTCATGAGCTCAGAATTTTG+TGG | + | chr3_4:35402326-35402345 | Msa0498570:intron | 35.0% |
!!! | TTTTGTGGTTCTAACACTAC+AGG | + | chr3_4:35402341-35402360 | Msa0498570:intron | 35.0% |
! | TGCCCTAGAAAAATTTTCGA+AGG | + | chr3_4:35402425-35402444 | Msa0498570:CDS | 35.0% |
!! | AGACTAACCATCTTTTTAGG+TGG | + | chr3_4:35402682-35402701 | Msa0498570:intron | 35.0% |
TAGAAAGCCACCTAAAAAGA+TGG | - | chr3_4:35402692-35402711 | None:intergenic | 35.0% | |
!! | CTCTCAATGGCTTTGTATAT+TGG | + | chr3_4:35403142-35403161 | Msa0498570:intron | 35.0% |
TTAGCATTCTCATCTTCCAT+AGG | - | chr3_4:35403317-35403336 | None:intergenic | 35.0% | |
TATGGAAGATGAGAATGCTA+AGG | + | chr3_4:35403316-35403335 | Msa0498570:intron | 35.0% | |
GCGTCTCTTTCATAATTCAT+AGG | - | chr3_4:35403521-35403540 | None:intergenic | 35.0% | |
! | CGAACAATACCTATGTGTTT+TGG | + | chr3_4:35403632-35403651 | Msa0498570:intron | 35.0% |
! | TTTTGGCATCCATAGGTTAT+AGG | + | chr3_4:35403649-35403668 | Msa0498570:intron | 35.0% |
ATGCATTGAAGCAGATGAAA+AGG | + | chr3_4:35403686-35403705 | Msa0498570:CDS | 35.0% | |
TGCATTGAAGCAGATGAAAA+GGG | + | chr3_4:35403687-35403706 | Msa0498570:CDS | 35.0% | |
! | GCTACTCTGATATTGGTTAT+CGG | - | chr3_4:35403868-35403887 | None:intergenic | 35.0% |
CATGTTATTAGTTGAACCAG+GGG | + | chr3_4:35403927-35403946 | Msa0498570:intron | 35.0% | |
! | CAATAATGTATCTTTTCCCC+TGG | - | chr3_4:35403946-35403965 | None:intergenic | 35.0% |
ACAATCTCAACCATTGATCA+TGG | + | chr3_4:35404001-35404020 | Msa0498570:intron | 35.0% | |
CTACAATATGTGCTGAACTT+GGG | + | chr3_4:35404102-35404121 | Msa0498570:intron | 35.0% | |
ATATTGCTGAAACTACAACC+CGG | + | chr3_4:35404128-35404147 | Msa0498570:intron | 35.0% | |
! | ACAAATTAGAGCTTTTGCTG+TGG | + | chr3_4:35404254-35404273 | Msa0498570:intron | 35.0% |
! | TACCTTATCTGAGGTTAATG+TGG | + | chr3_4:35404775-35404794 | Msa0498570:three_prime_UTR | 35.0% |
TACCACATTAACCTCAGATA+AGG | - | chr3_4:35404780-35404799 | None:intergenic | 35.0% | |
AGAGGGGGATAAAAAAAAAG+GGG | - | chr3_4:35404811-35404830 | None:intergenic | 35.0% | |
TCTCTTTGATCATGTAAGAG+GGG | - | chr3_4:35404827-35404846 | None:intergenic | 35.0% | |
GTCTCTTTGATCATGTAAGA+GGG | - | chr3_4:35404828-35404847 | None:intergenic | 35.0% | |
TGTCTCTTTGATCATGTAAG+AGG | - | chr3_4:35404829-35404848 | None:intergenic | 35.0% | |
TTGCCATTGTTTGGAAGAGT+GGG | - | chr3_4:35391718-35391737 | None:intergenic | 40.0% | |
TTTGCCATTGTTTGGAAGAG+TGG | - | chr3_4:35391719-35391738 | None:intergenic | 40.0% | |
! | TTGGATAGAGTTCGGGTTTA+CGG | - | chr3_4:35391787-35391806 | None:intergenic | 40.0% |
TAATCGAAGCTTACGAAGAG+CGG | - | chr3_4:35391921-35391940 | None:intergenic | 40.0% | |
! | AAGTTGATTTAGGGCCCATT+TGG | - | chr3_4:35392541-35392560 | None:intergenic | 40.0% |
GTTACAGCGTCTTTCATGAA+AGG | - | chr3_4:35392637-35392656 | None:intergenic | 40.0% | |
TCTATTGATCTGACGGTTGA+CGG | + | chr3_4:35392810-35392829 | Msa0498570:intron | 40.0% | |
GATTAACTAAAAGGGCAACC+CGG | + | chr3_4:35392837-35392856 | Msa0498570:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | - | chr3_4:35392903-35392922 | None:intergenic | 40.0% | |
CTCTTGTGTAAAACAGGGTA+AGG | - | chr3_4:35392929-35392948 | None:intergenic | 40.0% | |
! | CTTACCCTGTTTTACACAAG+AGG | + | chr3_4:35392927-35392946 | Msa0498570:intron | 40.0% |
ACAGCCTCTTGTGTAAAACA+GGG | - | chr3_4:35392934-35392953 | None:intergenic | 40.0% | |
AACAGCCTCTTGTGTAAAAC+AGG | - | chr3_4:35392935-35392954 | None:intergenic | 40.0% | |
!! | ATGTTGCTGATTGTGCGTTT+TGG | + | chr3_4:35393071-35393090 | Msa0498570:CDS | 40.0% |
!! | TGTTGCTGATTGTGCGTTTT+GGG | + | chr3_4:35393072-35393091 | Msa0498570:CDS | 40.0% |
! | GGGAATGTTGAGGTTTTACT+TGG | + | chr3_4:35393241-35393260 | Msa0498570:CDS | 40.0% |
!! | TGTTGAGGTTTTACTTGGTG+TGG | + | chr3_4:35393246-35393265 | Msa0498570:CDS | 40.0% |
!!! | GTTGAGGTTTTACTTGGTGT+GGG | + | chr3_4:35393247-35393266 | Msa0498570:CDS | 40.0% |
CTTGCGTCATTTACTCATGA+TGG | + | chr3_4:35393394-35393413 | Msa0498570:CDS | 40.0% | |
AATTCTGTTGGGAATTGGAC+TGG | + | chr3_4:35393482-35393501 | Msa0498570:intron | 40.0% | |
!!! | CCTTTTTTGCCACTTACACA+TGG | - | chr3_4:35394012-35394031 | None:intergenic | 40.0% |
CCATGTGTAAGTGGCAAAAA+AGG | + | chr3_4:35394009-35394028 | Msa0498570:intron | 40.0% | |
TCGTCATAAAGGTAGGTAAC+CGG | - | chr3_4:35394236-35394255 | None:intergenic | 40.0% | |
ATTCTTATTCCTGAGTGCGA+TGG | + | chr3_4:35394263-35394282 | Msa0498570:CDS | 40.0% | |
AAGATTGAAACTGTGGAGTC+AGG | - | chr3_4:35394335-35394354 | None:intergenic | 40.0% | |
! | TTTTGATAGGCGTAGTGCTA+AGG | + | chr3_4:35394406-35394425 | Msa0498570:CDS | 40.0% |
GGGAAATACTGCATAGTTTG+TGG | + | chr3_4:35394607-35394626 | Msa0498570:intron | 40.0% | |
! | ATAGTTTGTGGGCATGTGTT+TGG | + | chr3_4:35394619-35394638 | Msa0498570:intron | 40.0% |
ACAGCACAAGCTATTGAATG+AGG | - | chr3_4:35394826-35394845 | None:intergenic | 40.0% | |
! | AACTGATAGCGTACTTACCA+AGG | + | chr3_4:35394870-35394889 | Msa0498570:intron | 40.0% |
CTCAAACATGTCTTACTGAG+CGG | + | chr3_4:35395088-35395107 | Msa0498570:intron | 40.0% | |
TCAGTAGAAAGCAATGCTCA+AGG | - | chr3_4:35395120-35395139 | None:intergenic | 40.0% | |
ATGGTTACGACTCCCAATAA+TGG | + | chr3_4:35395182-35395201 | Msa0498570:intron | 40.0% | |
! | CTCAAATTTTCATCTGCCTG+GGG | - | chr3_4:35395463-35395482 | None:intergenic | 40.0% |
AAATTGCTGCCAAAGTCAAC+TGG | - | chr3_4:35395745-35395764 | None:intergenic | 40.0% | |
! | TAGTGCTGAAATTGTCTGTG+CGG | + | chr3_4:35395889-35395908 | Msa0498570:intron | 40.0% |
AGATGGTGTAAGCAACTGAT+AGG | - | chr3_4:35395938-35395957 | None:intergenic | 40.0% | |
! | GATGTTGGTGAGCATTTATC+AGG | - | chr3_4:35395975-35395994 | None:intergenic | 40.0% |
TTGCGGATATCCGAATATCT+CGG | + | chr3_4:35396003-35396022 | Msa0498570:CDS | 40.0% | |
! | GCAAATATTTCTGCTCGTGA+GGG | - | chr3_4:35396137-35396156 | None:intergenic | 40.0% |
! | TGCAAATATTTCTGCTCGTG+AGG | - | chr3_4:35396138-35396157 | None:intergenic | 40.0% |
TGATGGTTACGGACGTATAA+TGG | + | chr3_4:35396458-35396477 | Msa0498570:intron | 40.0% | |
TGGTTGGGAGACAATTACAA+AGG | + | chr3_4:35396925-35396944 | Msa0498570:intron | 40.0% | |
AGCAGTTAAAGGATCAAGGA+CGG | + | chr3_4:35396952-35396971 | Msa0498570:intron | 40.0% | |
!! | ACGAAAGTGTCGTTAGAGAA+GGG | + | chr3_4:35397013-35397032 | Msa0498570:intron | 40.0% |
ACTGAAGAACATGGCTAAAG+TGG | + | chr3_4:35397043-35397062 | Msa0498570:intron | 40.0% | |
CTGAAGAACATGGCTAAAGT+GGG | + | chr3_4:35397044-35397063 | Msa0498570:intron | 40.0% | |
GAAGAAGCAATGAATGAGGA+GGG | - | chr3_4:35397152-35397171 | None:intergenic | 40.0% | |
! | TGGAAGAGTTCTGACATACT+TGG | + | chr3_4:35397253-35397272 | Msa0498570:intron | 40.0% |
! | AAGAGTTCTGACATACTTGG+TGG | + | chr3_4:35397256-35397275 | Msa0498570:intron | 40.0% |
AAAGAACAGTTCAAAGGTGG+TGG | - | chr3_4:35397291-35397310 | None:intergenic | 40.0% | |
ATTGGCATATGAAACGTGTC+AGG | - | chr3_4:35397364-35397383 | None:intergenic | 40.0% | |
! | CAAGGTGTTTCCAGAAGTAT+TGG | - | chr3_4:35397382-35397401 | None:intergenic | 40.0% |
!! | AGGAATGTCCAAGAAGTGTT+TGG | - | chr3_4:35397525-35397544 | None:intergenic | 40.0% |
AAAAATCTGGATGTGGTGTC+TGG | + | chr3_4:35397987-35398006 | Msa0498570:intron | 40.0% | |
! | TGTCTGGATGTCCATTTTGT+TGG | + | chr3_4:35398003-35398022 | Msa0498570:intron | 40.0% |
!! | GTTGACTACTTTTGTGTAGG+AGG | + | chr3_4:35398185-35398204 | Msa0498570:intron | 40.0% |
TGCTAAGATAACTGCGTCAT+TGG | + | chr3_4:35398230-35398249 | Msa0498570:CDS | 40.0% | |
! | ATCTCTAGAAGAGTAGCATC+GGG | - | chr3_4:35398261-35398280 | None:intergenic | 40.0% |
TTGTAACAGAGCATGAAGAG+GGG | - | chr3_4:35398306-35398325 | None:intergenic | 40.0% | |
GATTGTAACAGAGCATGAAG+AGG | - | chr3_4:35398308-35398327 | None:intergenic | 40.0% | |
TTCCACCTGTTTAGATGAAC+GGG | - | chr3_4:35398475-35398494 | None:intergenic | 40.0% | |
ATCGAATTGGGTGTGACTTA+GGG | - | chr3_4:35398564-35398583 | None:intergenic | 40.0% | |
CTTCTTCTCCTATGCTTAAC+AGG | - | chr3_4:35398649-35398668 | None:intergenic | 40.0% | |
AGAAGATACAGCCTTGATGA+AGG | + | chr3_4:35398664-35398683 | Msa0498570:CDS | 40.0% | |
!! | TGGCAAAAGGTATTGGATTC+TGG | + | chr3_4:35398737-35398756 | Msa0498570:CDS | 40.0% |
ATGGTTCCAAAGAACTCCAA+CGG | - | chr3_4:35398861-35398880 | None:intergenic | 40.0% | |
! | TTTTCAAAAGGCAAGACAGG+TGG | + | chr3_4:35398945-35398964 | Msa0498570:intron | 40.0% |
! | TTTTCGACCAAATCATTGCC+TGG | + | chr3_4:35399055-35399074 | Msa0498570:intron | 40.0% |
AACTCTTCCAGGCAATGATT+TGG | - | chr3_4:35399065-35399084 | None:intergenic | 40.0% | |
ATACACAACTCAACTCTTCC+AGG | - | chr3_4:35399076-35399095 | None:intergenic | 40.0% | |
ACCCGGAATGACATAAGTTA+TGG | + | chr3_4:35399205-35399224 | Msa0498570:intron | 40.0% | |
GCACACTTTGACTATGGAAA+AGG | - | chr3_4:35399327-35399346 | None:intergenic | 40.0% | |
GCAAATGCACACTTTGACTA+TGG | - | chr3_4:35399333-35399352 | None:intergenic | 40.0% | |
TGAGATAACAATGCTGTTGC+TGG | + | chr3_4:35399534-35399553 | Msa0498570:intron | 40.0% | |
GAGATAACAATGCTGTTGCT+GGG | + | chr3_4:35399535-35399554 | Msa0498570:intron | 40.0% | |
AGATAACAATGCTGTTGCTG+GGG | + | chr3_4:35399536-35399555 | Msa0498570:intron | 40.0% | |
ATGACTGCAGTATAGTAAGC+TGG | - | chr3_4:35399594-35399613 | None:intergenic | 40.0% | |
ACTGCAGTCATACCTATTAC+TGG | + | chr3_4:35399603-35399622 | Msa0498570:intron | 40.0% | |
TCACCATCACATCCAGTAAT+AGG | - | chr3_4:35399618-35399637 | None:intergenic | 40.0% | |
TCAAGAATGTTCAGGAGGTA+TGG | - | chr3_4:35399753-35399772 | None:intergenic | 40.0% | |
!! | CTATTTCTATGGAGACAAGC+AGG | - | chr3_4:35399790-35399809 | None:intergenic | 40.0% |
GTTGGGAAATAGAGAGTAGT+AGG | + | chr3_4:35399927-35399946 | Msa0498570:intron | 40.0% | |
TGGGAAATAGAGAGTAGTAG+GGG | + | chr3_4:35399929-35399948 | Msa0498570:intron | 40.0% | |
TGAAGTGTATGATGCAACAC+GGG | + | chr3_4:35400092-35400111 | Msa0498570:intron | 40.0% | |
! | CATGGGTTTAGGATTTCTTG+AGG | + | chr3_4:35400160-35400179 | Msa0498570:intron | 40.0% |
! | GGTTTAGGATTTCTTGAGGT+GGG | + | chr3_4:35400164-35400183 | Msa0498570:intron | 40.0% |
CAATTAACAGCGCACATATG+AGG | - | chr3_4:35400205-35400224 | None:intergenic | 40.0% | |
TTAAGTATGTGCGCATCTTG+AGG | + | chr3_4:35400288-35400307 | Msa0498570:intron | 40.0% | |
! | GTTTCCATGGAGTTTCAAGT+TGG | + | chr3_4:35400316-35400335 | Msa0498570:intron | 40.0% |
GAAACCAACTTGAAACTCCA+TGG | - | chr3_4:35400323-35400342 | None:intergenic | 40.0% | |
GTGGGAGAATCTTAAATGAC+AGG | + | chr3_4:35400563-35400582 | Msa0498570:intron | 40.0% | |
AACCAGAATGCTCTCATTAC+AGG | + | chr3_4:35400601-35400620 | Msa0498570:intron | 40.0% | |
ACCAGAATGCTCTCATTACA+GGG | + | chr3_4:35400602-35400621 | Msa0498570:intron | 40.0% | |
!!! | TCTGTCCATGTTTTCTAGCT+TGG | + | chr3_4:35400822-35400841 | Msa0498570:intron | 40.0% |
TCTGTCCAAGCTAGAAAACA+TGG | - | chr3_4:35400830-35400849 | None:intergenic | 40.0% | |
GCATTTCCTTGTAATAGGGA+TGG | + | chr3_4:35401096-35401115 | Msa0498570:intron | 40.0% | |
GTGAAACCATCCCTATTACA+AGG | - | chr3_4:35401105-35401124 | None:intergenic | 40.0% | |
AGGATGTGGCATTTCTTCTT+TGG | + | chr3_4:35401423-35401442 | Msa0498570:intron | 40.0% | |
AAAAAATCCCATGGCAAGCA+AGG | + | chr3_4:35401466-35401485 | Msa0498570:CDS | 40.0% | |
AAAAATCCCATGGCAAGCAA+GGG | + | chr3_4:35401467-35401486 | Msa0498570:CDS | 40.0% | |
TTTATTCGAGGACCATGAAG+TGG | - | chr3_4:35401497-35401516 | None:intergenic | 40.0% | |
AAATGCTAACAAGTGCCCTA+AGG | + | chr3_4:35401784-35401803 | Msa0498570:intron | 40.0% | |
AATGCTAACAAGTGCCCTAA+GGG | + | chr3_4:35401785-35401804 | Msa0498570:intron | 40.0% | |
GTTTCTTATCAAGTGCCCTT+AGG | - | chr3_4:35401803-35401822 | None:intergenic | 40.0% | |
ATTCCTTAACCATTGCCCTA+AGG | + | chr3_4:35401923-35401942 | Msa0498570:intron | 40.0% | |
TTCCTTAACCATTGCCCTAA+GGG | + | chr3_4:35401924-35401943 | Msa0498570:intron | 40.0% | |
TTTGCTAACCAATGCCCTTA+GGG | - | chr3_4:35401941-35401960 | None:intergenic | 40.0% | |
! | TTTTGCTAACCAATGCCCTT+AGG | - | chr3_4:35401942-35401961 | None:intergenic | 40.0% |
GATTTATACAGAAGCGGTAG+GGG | - | chr3_4:35402304-35402323 | None:intergenic | 40.0% | |
CTGATTTATACAGAAGCGGT+AGG | - | chr3_4:35402306-35402325 | None:intergenic | 40.0% | |
!! | GAAGAGATGGTATTGGCTTA+AGG | + | chr3_4:35402371-35402390 | Msa0498570:CDS | 40.0% |
! | TTGGCTTAAGGTTTTTGCTC+TGG | + | chr3_4:35402383-35402402 | Msa0498570:CDS | 40.0% |
AAGGAGAAGAAACCTCCAAT+AGG | + | chr3_4:35402444-35402463 | Msa0498570:CDS | 40.0% | |
CACAACTCAAGCTGAATCTA+TGG | + | chr3_4:35402597-35402616 | Msa0498570:intron | 40.0% | |
CTATGGATGCCAAAACACAT+AGG | - | chr3_4:35403644-35403663 | None:intergenic | 40.0% | |
!!! | CTATGTGTTTTGGCATCCAT+AGG | + | chr3_4:35403642-35403661 | Msa0498570:intron | 40.0% |
GACAAATGGCCTATAACCTA+TGG | - | chr3_4:35403661-35403680 | None:intergenic | 40.0% | |
!! | ATACCTCAGCTTTTTCTCGA+GGG | - | chr3_4:35403746-35403765 | None:intergenic | 40.0% |
!! | AATACCTCAGCTTTTTCTCG+AGG | - | chr3_4:35403747-35403766 | None:intergenic | 40.0% |
! | CTGATATTGGTTATCGGTGT+TGG | - | chr3_4:35403862-35403881 | None:intergenic | 40.0% |
TGAACTGGCTACTCTGATAT+TGG | - | chr3_4:35403875-35403894 | None:intergenic | 40.0% | |
! | GGAGCTTTAACCATGATCAA+TGG | - | chr3_4:35404014-35404033 | None:intergenic | 40.0% |
! | ATTTCTGGAGATAGAGGACT+TGG | - | chr3_4:35404077-35404096 | None:intergenic | 40.0% |
!! | GGCTTTATTTCTGGAGATAG+AGG | - | chr3_4:35404083-35404102 | None:intergenic | 40.0% |
CCAAGTTCAGCACATATTGT+AGG | - | chr3_4:35404104-35404123 | None:intergenic | 40.0% | |
CCTACAATATGTGCTGAACT+TGG | + | chr3_4:35404101-35404120 | Msa0498570:intron | 40.0% | |
! | CGAGATCGATTGTCTTTTCA+AGG | + | chr3_4:35404650-35404669 | Msa0498570:CDS | 40.0% |
ATAAATAGGAAAGCGGTACG+AGG | - | chr3_4:35404710-35404729 | None:intergenic | 40.0% | |
GAGGGGGATAAAAAAAAAGG+GGG | - | chr3_4:35404810-35404829 | None:intergenic | 40.0% | |
CTCTTTGATCATGTAAGAGG+GGG | - | chr3_4:35404826-35404845 | None:intergenic | 40.0% | |
TGATCAAGGTGGAGAAGACA+TGG | - | chr3_4:35391669-35391688 | None:intergenic | 45.0% | |
CATTGTTTGGAAGAGTGGGA+TGG | - | chr3_4:35391714-35391733 | None:intergenic | 45.0% | |
CATCCCACTCTTCCAAACAA+TGG | + | chr3_4:35391712-35391731 | Msa0498570:exon | 45.0% | |
CTGAGACGTTTGCCATTGTT+TGG | - | chr3_4:35391727-35391746 | None:intergenic | 45.0% | |
TACGGTAGTAACGGTTGTAG+AGG | - | chr3_4:35391769-35391788 | None:intergenic | 45.0% | |
! | GTTCGGGTTTACGGTAGTAA+CGG | - | chr3_4:35391778-35391797 | None:intergenic | 45.0% |
CATCGCATTGGATAGAGTTC+GGG | - | chr3_4:35391794-35391813 | None:intergenic | 45.0% | |
CCATCGCATTGGATAGAGTT+CGG | - | chr3_4:35391795-35391814 | None:intergenic | 45.0% | |
! | TTTGGAATCGTCACGGATCA+CGG | - | chr3_4:35391876-35391895 | None:intergenic | 45.0% |
!!! | GGACGATTTTGGAATCGTCA+CGG | - | chr3_4:35391883-35391902 | None:intergenic | 45.0% |
TCCAAAATCGTCCAGCTTCA+CGG | + | chr3_4:35391890-35391909 | Msa0498570:CDS | 45.0% | |
CTTCGATTATTCTCCTCCTC+CGG | + | chr3_4:35391932-35391951 | Msa0498570:CDS | 45.0% | |
GTAGGTTAATCGGAATGTCG+TGG | + | chr3_4:35391993-35392012 | Msa0498570:CDS | 45.0% | |
! | GCAGACGAGAGTATGATCAT+CGG | - | chr3_4:35392020-35392039 | None:intergenic | 45.0% |
CTGCGTTGTTCAAGATGGAA+CGG | + | chr3_4:35392036-35392055 | Msa0498570:CDS | 45.0% | |
! | GATTTAGGGCCCATTTGGAT+TGG | - | chr3_4:35392536-35392555 | None:intergenic | 45.0% |
! | CATGTATGCGACTTTAGAGG+TGG | + | chr3_4:35392773-35392792 | Msa0498570:intron | 45.0% |
GCGTACAATACACCAAATGG+TGG | - | chr3_4:35392904-35392923 | None:intergenic | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | - | chr3_4:35392907-35392926 | None:intergenic | 45.0% | |
! | TTACACAAGAGGCTGTTTCC+AGG | + | chr3_4:35392938-35392957 | Msa0498570:intron | 45.0% |
!! | GTTGCTGATTGTGCGTTTTG+GGG | + | chr3_4:35393073-35393092 | Msa0498570:CDS | 45.0% |
!!! | GATTGTGCGTTTTGGGGAAA+TGG | + | chr3_4:35393079-35393098 | Msa0498570:CDS | 45.0% |
GGTTATTGAGCCGCAGTATA+CGG | + | chr3_4:35393213-35393232 | Msa0498570:CDS | 45.0% | |
!!! | GTTTTACTTGGTGTGGGAGA+TGG | + | chr3_4:35393253-35393272 | Msa0498570:CDS | 45.0% |
CGTCATTTACTCATGATGGC+CGG | + | chr3_4:35393398-35393417 | Msa0498570:CDS | 45.0% | |
GTTACTACGTCGGATTTGAC+TGG | + | chr3_4:35393427-35393446 | Msa0498570:CDS | 45.0% | |
!! | TGACTGGTGTTATCATCGAG+AGG | + | chr3_4:35393443-35393462 | Msa0498570:CDS | 45.0% |
!! | GACTGGTGTTATCATCGAGA+GGG | + | chr3_4:35393444-35393463 | Msa0498570:CDS | 45.0% |
GCGTGAATTCTGTTGGGAAT+TGG | + | chr3_4:35393477-35393496 | Msa0498570:intron | 45.0% | |
GGAAACACTTGCAAAGACAC+TGG | + | chr3_4:35393671-35393690 | Msa0498570:intron | 45.0% | |
CAACACTGTCATTGACACGT+AGG | + | chr3_4:35393703-35393722 | Msa0498570:intron | 45.0% | |
GGTGTAACCACATGTTGTGT+TGG | + | chr3_4:35393759-35393778 | Msa0498570:intron | 45.0% | |
TGAGGGATGTGCTTAAGTCT+TGG | + | chr3_4:35393844-35393863 | Msa0498570:intron | 45.0% | |
CTTTATGTACTACCGCTGTC+AGG | + | chr3_4:35394088-35394107 | Msa0498570:intron | 45.0% | |
TGGATGCTGTTCTGCTTTAC+TGG | + | chr3_4:35394174-35394193 | Msa0498570:CDS | 45.0% | |
GGATGCTGTTCTGCTTTACT+GGG | + | chr3_4:35394175-35394194 | Msa0498570:CDS | 45.0% | |
!!! | CTTTTAATGATGGGCCCTGA+TGG | + | chr3_4:35394206-35394225 | Msa0498570:CDS | 45.0% |
ACCAGATAACCGACATACAG+TGG | - | chr3_4:35394495-35394514 | None:intergenic | 45.0% | |
!!! | GCTTGTGCTGTTTTCTCTTG+TGG | + | chr3_4:35394835-35394854 | Msa0498570:intron | 45.0% |
AAACATGTCTTACTGAGCGG+TGG | + | chr3_4:35395091-35395110 | Msa0498570:intron | 45.0% | |
AACATGTCTTACTGAGCGGT+GGG | + | chr3_4:35395092-35395111 | Msa0498570:intron | 45.0% | |
ATGAAGGAAACCAGCATTCG+TGG | + | chr3_4:35395279-35395298 | Msa0498570:intron | 45.0% | |
TGAAGGAAACCAGCATTCGT+GGG | + | chr3_4:35395280-35395299 | Msa0498570:intron | 45.0% | |
TGTAAAACACCCACGAATGC+TGG | - | chr3_4:35395292-35395311 | None:intergenic | 45.0% | |
CTTACACCATCTGTCCTGAT+TGG | + | chr3_4:35395946-35395965 | Msa0498570:CDS | 45.0% | |
CATTTATCAGGCGACCAATC+AGG | - | chr3_4:35395963-35395982 | None:intergenic | 45.0% | |
ACCAACATCTGCTTGCATTG+CGG | + | chr3_4:35395986-35396005 | Msa0498570:CDS | 45.0% | |
!! | TGAGGGCATGCTCTTTTCAA+AGG | - | chr3_4:35396362-35396381 | None:intergenic | 45.0% |
GCAGTTAAAGGATCAAGGAC+GGG | + | chr3_4:35396953-35396972 | Msa0498570:intron | 45.0% | |
!! | GACGAAAGTGTCGTTAGAGA+AGG | + | chr3_4:35397012-35397031 | Msa0498570:intron | 45.0% |
TGTCGTTAGAGAAGGGAGTA+GGG | + | chr3_4:35397020-35397039 | Msa0498570:intron | 45.0% | |
CAATGAATGAGGAGGGCTAA+GGG | - | chr3_4:35397145-35397164 | None:intergenic | 45.0% | |
GGAAGAAGCAATGAATGAGG+AGG | - | chr3_4:35397153-35397172 | None:intergenic | 45.0% | |
! | CTGACATACTTGGTGGATAC+AGG | + | chr3_4:35397263-35397282 | Msa0498570:intron | 45.0% |
CATATGAAACGTGTCAGGCA+CGG | - | chr3_4:35397359-35397378 | None:intergenic | 45.0% | |
AGGTGTCTGACATGTGTTCA+AGG | - | chr3_4:35397400-35397419 | None:intergenic | 45.0% | |
CACACCTGTTAGACATGTGT+TGG | + | chr3_4:35397462-35397481 | Msa0498570:intron | 45.0% | |
GTGTCCAACACATGTCTAAC+AGG | - | chr3_4:35397469-35397488 | None:intergenic | 45.0% | |
TTAGACATGTGTTGGACACG+TGG | + | chr3_4:35397470-35397489 | Msa0498570:intron | 45.0% | |
!! | GACTACTTTTGTGTAGGAGG+TGG | + | chr3_4:35398188-35398207 | Msa0498570:intron | 45.0% |
TGTAACAGAGCATGAAGAGG+GGG | - | chr3_4:35398305-35398324 | None:intergenic | 45.0% | |
GCTGCTCATGCAGACAAAAA+TGG | + | chr3_4:35398411-35398430 | Msa0498570:CDS | 45.0% | |
CAAGCAAGGCAGCTAACTTT+CGG | - | chr3_4:35398440-35398459 | None:intergenic | 45.0% | |
TCCACCTGTTTAGATGAACG+GGG | - | chr3_4:35398474-35398493 | None:intergenic | 45.0% | |
CATCGAATTGGGTGTGACTT+AGG | - | chr3_4:35398565-35398584 | None:intergenic | 45.0% | |
CTAAGTCACACCCAATTCGA+TGG | + | chr3_4:35398563-35398582 | Msa0498570:intron | 45.0% | |
CAGAAACCAGCCATCGAATT+GGG | - | chr3_4:35398576-35398595 | None:intergenic | 45.0% | |
GTTCCTCTCCTGTTAAGCAT+AGG | + | chr3_4:35398638-35398657 | Msa0498570:CDS | 45.0% | |
TCTCCTATGCTTAACAGGAG+AGG | - | chr3_4:35398644-35398663 | None:intergenic | 45.0% | |
ACATTCAGTCGCCTTCATCA+AGG | - | chr3_4:35398678-35398697 | None:intergenic | 45.0% | |
TTGATGAAGGCGACTGAATG+TGG | + | chr3_4:35398677-35398696 | Msa0498570:CDS | 45.0% | |
!! | GGAGTTCTTTGGAACCATAC+AGG | + | chr3_4:35398863-35398882 | Msa0498570:CDS | 45.0% |
TGCTAATTGTCTGGCCTGTA+TGG | - | chr3_4:35398880-35398899 | None:intergenic | 45.0% | |
TACAGGCCAGACAATTAGCA+CGG | + | chr3_4:35398880-35398899 | Msa0498570:CDS | 45.0% | |
TAAGTCCCGTGCTAATTGTC+TGG | - | chr3_4:35398889-35398908 | None:intergenic | 45.0% | |
!! | CAGTGCTACTTATGCACTCT+TGG | + | chr3_4:35399132-35399151 | Msa0498570:intron | 45.0% |
TGGCAGAACAAAGATGCCTT+TGG | - | chr3_4:35399232-35399251 | None:intergenic | 45.0% | |
GACTATGGAAAAGGGGACAA+AGG | - | chr3_4:35399318-35399337 | None:intergenic | 45.0% | |
TGCAATTTAGAAGCAGGCAG+AGG | + | chr3_4:35399869-35399888 | Msa0498570:intron | 45.0% | |
AAAGCTAAGTGGCAGGAGTT+GGG | + | chr3_4:35399910-35399929 | Msa0498570:intron | 45.0% | |
GGGAAATAGAGAGTAGTAGG+GGG | + | chr3_4:35399930-35399949 | Msa0498570:intron | 45.0% | |
TAGGGGGTCACAAATCACAA+TGG | + | chr3_4:35399946-35399965 | Msa0498570:intron | 45.0% | |
AGGGGGTCACAAATCACAAT+GGG | + | chr3_4:35399947-35399966 | Msa0498570:intron | 45.0% | |
! | GGGTTTAGGATTTCTTGAGG+TGG | + | chr3_4:35400163-35400182 | Msa0498570:intron | 45.0% |
ACAAGAGTGAGACATGGCAA+GGG | + | chr3_4:35400518-35400537 | Msa0498570:intron | 45.0% | |
! | GGCAAGGGCATATTCTATGA+AGG | + | chr3_4:35400533-35400552 | Msa0498570:intron | 45.0% |
!! | TCCCTGTAATGAGAGCATTC+TGG | - | chr3_4:35400606-35400625 | None:intergenic | 45.0% |
!!! | AAGTGGACTAGTGTTTTGGG+AGG | + | chr3_4:35400717-35400736 | Msa0498570:intron | 45.0% |
!!! | CTTCTTTTTTTGCGCGGAAG+CGG | + | chr3_4:35401232-35401251 | Msa0498570:intron | 45.0% |
AAGAAATGCCACATCCTGCA+TGG | - | chr3_4:35401420-35401439 | None:intergenic | 45.0% | |
CTCAGCTGCCTTTGATTCAA+AGG | - | chr3_4:35401567-35401586 | None:intergenic | 45.0% | |
CTTTGAATCAAAGGCAGCTG+AGG | + | chr3_4:35401565-35401584 | Msa0498570:CDS | 45.0% | |
! | TGGTCACTTCAAGTTCATGC+TGG | - | chr3_4:35402048-35402067 | None:intergenic | 45.0% |
ACTTGAAGTGACCACAAAGC+AGG | + | chr3_4:35402054-35402073 | Msa0498570:CDS | 45.0% | |
CACAAAAATGGCCTGCTTTG+TGG | - | chr3_4:35402068-35402087 | None:intergenic | 45.0% | |
!!! | CACAAAGCAGGCCATTTTTG+TGG | + | chr3_4:35402066-35402085 | Msa0498570:CDS | 45.0% |
AATCCGGACTTGTATTGTCC+TGG | + | chr3_4:35402108-35402127 | Msa0498570:CDS | 45.0% | |
ATCCGGACTTGTATTGTCCT+GGG | + | chr3_4:35402109-35402128 | Msa0498570:CDS | 45.0% | |
TTCCCAGGACAATACAAGTC+CGG | - | chr3_4:35402114-35402133 | None:intergenic | 45.0% | |
! | GGTTCTAACACTACAGGTGT+CGG | + | chr3_4:35402347-35402366 | Msa0498570:intron | 45.0% |
TGTCGGAGAAGAGATGGTAT+TGG | + | chr3_4:35402364-35402383 | Msa0498570:CDS | 45.0% | |
! | TTTTGCTCTGGCCACAATCA+AGG | + | chr3_4:35402395-35402414 | Msa0498570:CDS | 45.0% |
! | AATACAACCTGCTTGCTGAG+TGG | - | chr3_4:35402575-35402594 | None:intergenic | 45.0% |
!! | GTGGCTTTCTAGTTGCAGTT+TGG | + | chr3_4:35402701-35402720 | Msa0498570:intron | 45.0% |
TGATTCAGTACAACGTGCAG+TGG | + | chr3_4:35402905-35402924 | Msa0498570:intron | 45.0% | |
AGGTTATAGGCCATTTGTCG+AGG | + | chr3_4:35403662-35403681 | Msa0498570:intron | 45.0% | |
TCAATGCATGCCTCGACAAA+TGG | - | chr3_4:35403675-35403694 | None:intergenic | 45.0% | |
TAGAGGACTTGGCATCTCAA+TGG | - | chr3_4:35404066-35404085 | None:intergenic | 45.0% | |
GTCGTATGCTCGAATTGGTA+TGG | + | chr3_4:35404517-35404536 | Msa0498570:intron | 45.0% | |
TCAAAAGACGGTGAGTTGCT+TGG | + | chr3_4:35404569-35404588 | Msa0498570:CDS | 45.0% | |
!!! | ATGATATAAATTTAAAATTA+TGG | - | chr3_4:35393907-35393926 | None:intergenic | 5.0% |
!!! | TTTAATATTTTTTTAGTAAT+TGG | + | chr3_4:35403427-35403446 | Msa0498570:intron | 5.0% |
TGTTTGGAAGAGTGGGATGG+TGG | - | chr3_4:35391711-35391730 | None:intergenic | 50.0% | |
CCGAACTCTATCCAATGCGA+TGG | + | chr3_4:35391792-35391811 | Msa0498570:CDS | 50.0% | |
TCGACGTGTTTCCATCGCAT+TGG | - | chr3_4:35391806-35391825 | None:intergenic | 50.0% | |
ATTCCGATTAACCTACCGCC+GGG | - | chr3_4:35391989-35392008 | None:intergenic | 50.0% | |
CATTCCGATTAACCTACCGC+CGG | - | chr3_4:35391990-35392009 | None:intergenic | 50.0% | |
CTCGTCTGCGTTGTTCAAGA+TGG | + | chr3_4:35392031-35392050 | Msa0498570:CDS | 50.0% | |
! | ACAAGAGGCTGTTTCCAGGA+CGG | + | chr3_4:35392942-35392961 | Msa0498570:intron | 50.0% |
GCAGTTAATCACAACCGTCC+TGG | - | chr3_4:35392959-35392978 | None:intergenic | 50.0% | |
AAACCCTAACGCGGTGAAGT+TGG | + | chr3_4:35393153-35393172 | Msa0498570:CDS | 50.0% | |
TCAATAACCGCCATACACCG+TGG | - | chr3_4:35393202-35393221 | None:intergenic | 50.0% | |
TTCCCAGACACCGTATACTG+CGG | - | chr3_4:35393226-35393245 | None:intergenic | 50.0% | |
TACGGTGTCTGGGAATGTTG+AGG | + | chr3_4:35393231-35393250 | Msa0498570:CDS | 50.0% | |
!! | TTACTTGGTGTGGGAGATGG+TGG | + | chr3_4:35393256-35393275 | Msa0498570:CDS | 50.0% |
GTGATTGCAGTTGAGGAGGA+CGG | + | chr3_4:35393298-35393317 | Msa0498570:CDS | 50.0% | |
!! | CTTGGTGGTGAGATGCTAAG+AGG | + | chr3_4:35393331-35393350 | Msa0498570:CDS | 50.0% |
AAGAGGACCGTTGCAGAAGA+TGG | + | chr3_4:35393348-35393367 | Msa0498570:CDS | 50.0% | |
GACACCACCATCTTCTGCAA+CGG | - | chr3_4:35393358-35393377 | None:intergenic | 50.0% | |
! | TGCAGAAGATGGTGGTGTCA+CGG | + | chr3_4:35393359-35393378 | Msa0498570:CDS | 50.0% |
CCGACGTAGTAACAAGAAGC+CGG | - | chr3_4:35393420-35393439 | None:intergenic | 50.0% | |
CCGGCTTCTTGTTACTACGT+CGG | + | chr3_4:35393417-35393436 | Msa0498570:CDS | 50.0% | |
CGAGGTGCGTGAATTCTGTT+GGG | + | chr3_4:35393471-35393490 | Msa0498570:intron | 50.0% | |
ACTTGCAAAGACACTGGCAC+TGG | + | chr3_4:35393677-35393696 | Msa0498570:intron | 50.0% | |
CTTGCAAAGACACTGGCACT+GGG | + | chr3_4:35393678-35393697 | Msa0498570:intron | 50.0% | |
! | GCTAGAGCACCATGTGTAAG+TGG | + | chr3_4:35394000-35394019 | Msa0498570:intron | 50.0% |
! | AGGTAACCGGTTCTCCATCA+GGG | - | chr3_4:35394223-35394242 | None:intergenic | 50.0% |
! | TAGGTAACCGGTTCTCCATC+AGG | - | chr3_4:35394224-35394243 | None:intergenic | 50.0% |
GAGGTGTAGCCACTGTATGT+CGG | + | chr3_4:35394483-35394502 | Msa0498570:intron | 50.0% | |
! | GCCACTGTATGTCGGTTATC+TGG | + | chr3_4:35394491-35394510 | Msa0498570:intron | 50.0% |
GATAAGATCGTCCCTTCCTG+AGG | + | chr3_4:35395486-35395505 | Msa0498570:CDS | 50.0% | |
TGCTTCAACAGCCTCAGGAA+GGG | - | chr3_4:35395500-35395519 | None:intergenic | 50.0% | |
ATGCTTCAACAGCCTCAGGA+AGG | - | chr3_4:35395501-35395520 | None:intergenic | 50.0% | |
ACACATGCTTCAACAGCCTC+AGG | - | chr3_4:35395505-35395524 | None:intergenic | 50.0% | |
! | GAAGCATGTGTTGATGCTGC+AGG | + | chr3_4:35395514-35395533 | Msa0498570:CDS | 50.0% |
TCCTAAGGGCAGCCAGTTAT+GGG | + | chr3_4:35395569-35395588 | Msa0498570:CDS | 50.0% | |
ACAAAAGGCCTGCCCATAAC+TGG | - | chr3_4:35395584-35395603 | None:intergenic | 50.0% | |
! | GTTATGGGCAGGCCTTTTGT+AGG | + | chr3_4:35395584-35395603 | Msa0498570:CDS | 50.0% |
TCCGCAATGCAAGCAGATGT+TGG | - | chr3_4:35395990-35396009 | None:intergenic | 50.0% | |
TTGCATTACTTGCCGAGTCC+TGG | + | chr3_4:35396153-35396172 | Msa0498570:intron | 50.0% | |
AGGCAGAAAAGTCCAGGACT+CGG | - | chr3_4:35396168-35396187 | None:intergenic | 50.0% | |
GGTATGAGCTTGAAGCAGAG+TGG | + | chr3_4:35396990-35397009 | Msa0498570:intron | 50.0% | |
! | GTGTCGTTAGAGAAGGGAGT+AGG | + | chr3_4:35397019-35397038 | Msa0498570:intron | 50.0% |
GGAGTAGGGACTGAAGAACA+TGG | + | chr3_4:35397034-35397053 | Msa0498570:intron | 50.0% | |
GGAGGGCTAAGGGATAGAAA+GGG | - | chr3_4:35397135-35397154 | None:intergenic | 50.0% | |
AGGAGGGCTAAGGGATAGAA+AGG | - | chr3_4:35397136-35397155 | None:intergenic | 50.0% | |
GCAATGAATGAGGAGGGCTA+AGG | - | chr3_4:35397146-35397165 | None:intergenic | 50.0% | |
ACTGAGTCAACACCTGCTCT+TGG | + | chr3_4:35397499-35397518 | Msa0498570:intron | 50.0% | |
!! | AGAAGTGTTTGGCCAAGAGC+AGG | - | chr3_4:35397514-35397533 | None:intergenic | 50.0% |
GCTCTTGGCCAAACACTTCT+TGG | + | chr3_4:35397514-35397533 | Msa0498570:intron | 50.0% | |
! | AGGAGGTGGTGATAATGCAC+TGG | + | chr3_4:35398202-35398221 | Msa0498570:intron | 50.0% |
! | GGAGGTGGTGATAATGCACT+GGG | + | chr3_4:35398203-35398222 | Msa0498570:intron | 50.0% |
ATGAGCAGCAACTGCTGCAT+AGG | - | chr3_4:35398400-35398419 | None:intergenic | 50.0% | |
GGGTTCGTGTTCAACAAGCA+AGG | - | chr3_4:35398454-35398473 | None:intergenic | 50.0% | |
CGAACCCCGTTCATCTAAAC+AGG | + | chr3_4:35398467-35398486 | Msa0498570:CDS | 50.0% | |
ACCCCGTTCATCTAAACAGG+TGG | + | chr3_4:35398470-35398489 | Msa0498570:intron | 50.0% | |
TGGGTGTGACTTAGGGATGA+GGG | - | chr3_4:35398557-35398576 | None:intergenic | 50.0% | |
TTGGGTGTGACTTAGGGATG+AGG | - | chr3_4:35398558-35398577 | None:intergenic | 50.0% | |
CCAGAAACCAGCCATCGAAT+TGG | - | chr3_4:35398577-35398596 | None:intergenic | 50.0% | |
!! | CCAATTCGATGGCTGGTTTC+TGG | + | chr3_4:35398574-35398593 | Msa0498570:intron | 50.0% |
!! | TTCGATGGCTGGTTTCTGGT+TGG | + | chr3_4:35398578-35398597 | Msa0498570:intron | 50.0% |
AGGCAACCGTTGGAGTTCTT+TGG | + | chr3_4:35398852-35398871 | Msa0498570:CDS | 50.0% | |
ACAGGCCAGACAATTAGCAC+GGG | + | chr3_4:35398881-35398900 | Msa0498570:CDS | 50.0% | |
AAGGGGACAAAGGTTGACAG+CGG | - | chr3_4:35399308-35399327 | None:intergenic | 50.0% | |
!! | TGGGGCACTGGAATAGTTTG+TGG | + | chr3_4:35399554-35399573 | Msa0498570:intron | 50.0% |
TGCAGGACTCGATGAAGAAC+TGG | + | chr3_4:35399687-35399706 | Msa0498570:intron | 50.0% | |
GGACTCGATGAAGAACTGGA+TGG | + | chr3_4:35399691-35399710 | Msa0498570:intron | 50.0% | |
TTTAGAAGCAGGCAGAGGTG+CGG | + | chr3_4:35399874-35399893 | Msa0498570:intron | 50.0% | |
GGCAACAAGGGAAAGCTAAG+TGG | + | chr3_4:35399899-35399918 | Msa0498570:intron | 50.0% | |
ACAAGGGAAAGCTAAGTGGC+AGG | + | chr3_4:35399903-35399922 | Msa0498570:intron | 50.0% | |
GAAAGCTAAGTGGCAGGAGT+TGG | + | chr3_4:35399909-35399928 | Msa0498570:intron | 50.0% | |
AGTGTATGATGCAACACGGG+TGG | + | chr3_4:35400095-35400114 | Msa0498570:intron | 50.0% | |
GAGGTGGGTGATGAAGTATG+TGG | + | chr3_4:35400179-35400198 | Msa0498570:intron | 50.0% | |
TGCCACACAAGAGTGAGACA+TGG | + | chr3_4:35400512-35400531 | Msa0498570:intron | 50.0% | |
TGCCATGTCTCACTCTTGTG+TGG | - | chr3_4:35400517-35400536 | None:intergenic | 50.0% | |
CACAAGAGTGAGACATGGCA+AGG | + | chr3_4:35400517-35400536 | Msa0498570:intron | 50.0% | |
CGCTTCCGCGCAAAAAAAGA+AGG | - | chr3_4:35401234-35401253 | None:intergenic | 50.0% | |
AGCAAGGGATCTCCACTTCA+TGG | + | chr3_4:35401482-35401501 | Msa0498570:CDS | 50.0% | |
TGCCCTTAGGGCAATGGTTA+AGG | - | chr3_4:35401929-35401948 | None:intergenic | 50.0% | |
! | AACCATTGCCCTAAGGGCAT+TGG | + | chr3_4:35401930-35401949 | Msa0498570:intron | 50.0% |
AACCAATGCCCTTAGGGCAA+TGG | - | chr3_4:35401935-35401954 | None:intergenic | 50.0% | |
GCGGTAGGGGTCATAAAAAG+TGG | - | chr3_4:35402291-35402310 | None:intergenic | 50.0% | |
!! | TACAGGTGTCGGAGAAGAGA+TGG | + | chr3_4:35402358-35402377 | Msa0498570:intron | 50.0% |
TCTGGCCACAATCAAGGACT+GGG | + | chr3_4:35402401-35402420 | Msa0498570:CDS | 50.0% | |
TCTCGAGGGTCTGCAAGTTT+GGG | - | chr3_4:35403732-35403751 | None:intergenic | 50.0% | |
TTCTCGAGGGTCTGCAAGTT+TGG | - | chr3_4:35403733-35403752 | None:intergenic | 50.0% | |
AGACCCTCGAGAAAAAGCTG+AGG | + | chr3_4:35403740-35403759 | Msa0498570:CDS | 50.0% | |
GGACAGTCGTATGCTCGAAT+TGG | + | chr3_4:35404512-35404531 | Msa0498570:intron | 50.0% | |
TGCTCGAATTGGTATGGCCA+AGG | + | chr3_4:35404523-35404542 | Msa0498570:CDS | 50.0% | |
GCTGCTGCACAGTCAAAAGA+CGG | + | chr3_4:35404557-35404576 | Msa0498570:CDS | 50.0% | |
AAGACGGTGAGTTGCTTGGT+CGG | + | chr3_4:35404573-35404592 | Msa0498570:CDS | 50.0% | |
TACGAGGAGGCAGAAAAGTC+AGG | - | chr3_4:35404694-35404713 | None:intergenic | 50.0% | |
AATAGGAAAGCGGTACGAGG+AGG | - | chr3_4:35404707-35404726 | None:intergenic | 50.0% | |
GGCAAACGTCTCAGTAGCAG+CGG | + | chr3_4:35391733-35391752 | Msa0498570:CDS | 55.0% | |
AAAATCGCCGCCGCTCCTTT+CGG | + | chr3_4:35391839-35391858 | Msa0498570:CDS | 55.0% | |
! | GCCGTGAAGCTGGACGATTT+TGG | - | chr3_4:35391894-35391913 | None:intergenic | 55.0% |
AACCCCGGCGGTAGGTTAAT+CGG | + | chr3_4:35391983-35392002 | Msa0498570:CDS | 55.0% | |
TTCCGATTAACCTACCGCCG+GGG | - | chr3_4:35391988-35392007 | None:intergenic | 55.0% | |
ACTAGAGCTCCCGCATATGC+AGG | + | chr3_4:35392863-35392882 | Msa0498570:intron | 55.0% | |
CTAGAGCTCCCGCATATGCA+GGG | + | chr3_4:35392864-35392883 | Msa0498570:intron | 55.0% | |
CAGCCAACTTCACCGCGTTA+GGG | - | chr3_4:35393159-35393178 | None:intergenic | 55.0% | |
TCAGCCAACTTCACCGCGTT+AGG | - | chr3_4:35393160-35393179 | None:intergenic | 55.0% | |
ATAACCGCCATACACCGTGG+CGG | - | chr3_4:35393199-35393218 | None:intergenic | 55.0% | |
AGCCGCAGTATACGGTGTCT+GGG | + | chr3_4:35393221-35393240 | Msa0498570:CDS | 55.0% | |
AGGACCGTTGCAGAAGATGG+TGG | + | chr3_4:35393351-35393370 | Msa0498570:CDS | 55.0% | |
!! | GCAGAAGATGGTGGTGTCAC+GGG | + | chr3_4:35393360-35393379 | Msa0498570:CDS | 55.0% |
!! | AAGATGGTGGTGTCACGGGA+TGG | + | chr3_4:35393364-35393383 | Msa0498570:CDS | 55.0% |
!! | AGATGGTGGTGTCACGGGAT+GGG | + | chr3_4:35393365-35393384 | Msa0498570:CDS | 55.0% |
! | TATCATCGAGAGGGAGTGCG+AGG | + | chr3_4:35393453-35393472 | Msa0498570:CDS | 55.0% |
GCGAGGTGCGTGAATTCTGT+TGG | + | chr3_4:35393470-35393489 | Msa0498570:intron | 55.0% | |
! | TTCCTCCAGAGCAGCTTGCT+TGG | + | chr3_4:35394144-35394163 | Msa0498570:CDS | 55.0% |
!! | GCAGCTTGCTTGGTGTGGAA+TGG | + | chr3_4:35394154-35394173 | Msa0498570:CDS | 55.0% |
TTCCTGAGTGCGATGGAGTG+AGG | + | chr3_4:35394270-35394289 | Msa0498570:CDS | 55.0% | |
ATCCTCACTCCATCGCACTC+AGG | - | chr3_4:35394275-35394294 | None:intergenic | 55.0% | |
GCGTCATACAGCAAAGCTGC+GGG | - | chr3_4:35394377-35394396 | None:intergenic | 55.0% | |
CGCGTCATACAGCAAAGCTG+CGG | - | chr3_4:35394378-35394397 | None:intergenic | 55.0% | |
GCGCCAACGAACTCTCCTAA+GGG | + | chr3_4:35395555-35395574 | Msa0498570:CDS | 55.0% | |
CTGCCCTTAGGAGAGTTCGT+TGG | - | chr3_4:35395561-35395580 | None:intergenic | 55.0% | |
CTCCTAAGGGCAGCCAGTTA+TGG | + | chr3_4:35395568-35395587 | Msa0498570:CDS | 55.0% | |
!! | GCAGTGCGCAGCTTTGAGAT+CGG | + | chr3_4:35395814-35395833 | Msa0498570:CDS | 55.0% |
AGGCGACCAATCAGGACAGA+TGG | - | chr3_4:35395955-35395974 | None:intergenic | 55.0% | |
! | AGGATCAAGGACGGGCTCAT+AGG | + | chr3_4:35396961-35396980 | Msa0498570:intron | 55.0% |
! | GGATCAAGGACGGGCTCATA+GGG | + | chr3_4:35396962-35396981 | Msa0498570:intron | 55.0% |
ACAGAGCATGAAGAGGGGGA+GGG | - | chr3_4:35398301-35398320 | None:intergenic | 55.0% | |
AACAGAGCATGAAGAGGGGG+AGG | - | chr3_4:35398302-35398321 | None:intergenic | 55.0% | |
GCAAGGCAGCTAACTTTCGG+CGG | - | chr3_4:35398437-35398456 | None:intergenic | 55.0% | |
GGGTGTGACTTAGGGATGAG+GGG | - | chr3_4:35398556-35398575 | None:intergenic | 55.0% | |
GTCACACCCAATTCGATGGC+TGG | + | chr3_4:35398567-35398586 | Msa0498570:intron | 55.0% | |
GATGATGCAGAGGCAACCGT+TGG | + | chr3_4:35398842-35398861 | Msa0498570:intron | 55.0% | |
! | AGAGGTGCGGTTGGCAACAA+GGG | + | chr3_4:35399887-35399906 | Msa0498570:intron | 55.0% |
GGAGATCCCTTGCTTGCCAT+GGG | - | chr3_4:35401476-35401495 | None:intergenic | 55.0% | |
TGGAGATCCCTTGCTTGCCA+TGG | - | chr3_4:35401477-35401496 | None:intergenic | 55.0% | |
ACGCAGCTCGATGATTTCCC+AGG | - | chr3_4:35402129-35402148 | None:intergenic | 55.0% | |
CTCTGGCCACAATCAAGGAC+TGG | + | chr3_4:35402400-35402419 | Msa0498570:CDS | 55.0% | |
TCACATGCCACTCAGCAAGC+AGG | + | chr3_4:35402565-35402584 | Msa0498570:intron | 55.0% | |
TGGTATGGCCAAGGAAGCTG+CGG | + | chr3_4:35404532-35404551 | Msa0498570:CDS | 55.0% | |
ACGTCTCAGTAGCAGCGGAG+TGG | + | chr3_4:35391738-35391757 | Msa0498570:CDS | 60.0% | |
GGAAACACGTCGACCTCGCT+CGG | + | chr3_4:35391813-35391832 | Msa0498570:CDS | 60.0% | |
! | CGGCGATTTTGTTCCGAGCG+AGG | - | chr3_4:35391829-35391848 | None:intergenic | 60.0% |
!! | GGTATCGGCGAGGAGATGAC+CGG | - | chr3_4:35391954-35391973 | None:intergenic | 60.0% |
ATCTCCTCGCCGATACCGTC+TGG | + | chr3_4:35391957-35391976 | Msa0498570:CDS | 60.0% | |
! | ATGCGGGAGCTCTAGTGCAC+CGG | - | chr3_4:35392859-35392878 | None:intergenic | 60.0% |
TTCCCGGACCCTGCATATGC+GGG | - | chr3_4:35392875-35392894 | None:intergenic | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | - | chr3_4:35392876-35392895 | None:intergenic | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | + | chr3_4:35392875-35392894 | Msa0498570:intron | 60.0% | |
CATATGCAGGGTCCGGGAAG+GGG | + | chr3_4:35392876-35392895 | Msa0498570:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | - | chr3_4:35392891-35392910 | None:intergenic | 60.0% |
CGCGGTGAAGTTGGCTGATC+CGG | + | chr3_4:35393162-35393181 | Msa0498570:CDS | 60.0% | |
GCGGTGAAGTTGGCTGATCC+GGG | + | chr3_4:35393163-35393182 | Msa0498570:CDS | 60.0% | |
CGGTGAAGTTGGCTGATCCG+GGG | + | chr3_4:35393164-35393183 | Msa0498570:CDS | 60.0% | |
GTTGGCTGATCCGGGGATTG+TGG | + | chr3_4:35393171-35393190 | Msa0498570:CDS | 60.0% | |
GAGCCGCAGTATACGGTGTC+TGG | + | chr3_4:35393220-35393239 | Msa0498570:CDS | 60.0% | |
! | TGGTGTGGGAGATGGTGGTG+AGG | + | chr3_4:35393261-35393280 | Msa0498570:CDS | 60.0% |
! | TGTGGGAGATGGTGGTGAGG+AGG | + | chr3_4:35393264-35393283 | Msa0498570:CDS | 60.0% |
! | TGGTGGTGAGGAGGAGGATG+CGG | + | chr3_4:35393273-35393292 | Msa0498570:CDS | 60.0% |
TGCGGCGGTGATTGCAGTTG+AGG | + | chr3_4:35393291-35393310 | Msa0498570:CDS | 60.0% | |
GGCGGTGATTGCAGTTGAGG+AGG | + | chr3_4:35393294-35393313 | Msa0498570:CDS | 60.0% | |
TTGAGGAGGACGGTGTGCAG+AGG | + | chr3_4:35393308-35393327 | Msa0498570:CDS | 60.0% | |
!! | TGGTGTCACGGGATGGGAAG+TGG | + | chr3_4:35393371-35393390 | Msa0498570:CDS | 60.0% |
CACCAAGCAAGCTGCTCTGG+AGG | - | chr3_4:35394149-35394168 | None:intergenic | 60.0% | |
CCACACCAAGCAAGCTGCTC+TGG | - | chr3_4:35394152-35394171 | None:intergenic | 60.0% | |
! | CCAGAGCAGCTTGCTTGGTG+TGG | + | chr3_4:35394149-35394168 | Msa0498570:CDS | 60.0% |
GATGGGCCCTGATGGAGAAC+CGG | + | chr3_4:35394214-35394233 | Msa0498570:CDS | 60.0% | |
CGCGCCAACGAACTCTCCTA+AGG | + | chr3_4:35395554-35395573 | Msa0498570:CDS | 60.0% | |
GCCCATAACTGGCTGCCCTT+AGG | - | chr3_4:35395573-35395592 | None:intergenic | 60.0% | |
AAGGGCAGCCAGTTATGGGC+AGG | + | chr3_4:35395573-35395592 | Msa0498570:CDS | 60.0% | |
TCAGGCACGGCACATTGGAG+AGG | - | chr3_4:35397346-35397365 | None:intergenic | 60.0% | |
ACGTGTCAGGCACGGCACAT+TGG | - | chr3_4:35397351-35397370 | None:intergenic | 60.0% | |
CAGAGCATGAAGAGGGGGAG+GGG | - | chr3_4:35398300-35398319 | None:intergenic | 60.0% | |
GGGACAAAGGTTGACAGCGG+TGG | - | chr3_4:35399305-35399324 | None:intergenic | 60.0% | |
CAATGCTGTTGCTGGGGCAC+TGG | + | chr3_4:35399542-35399561 | Msa0498570:intron | 60.0% | |
! | CAGAGGTGCGGTTGGCAACA+AGG | + | chr3_4:35399886-35399905 | Msa0498570:intron | 60.0% |
TGATGCAACACGGGTGGCTG+TGG | + | chr3_4:35400101-35400120 | Msa0498570:intron | 60.0% | |
GGCAGCCCAGTCCTTGATTG+TGG | - | chr3_4:35402409-35402428 | None:intergenic | 60.0% | |
AGCAGCATCCGCAGCTTCCT+TGG | - | chr3_4:35404543-35404562 | None:intergenic | 60.0% | |
GAGTGGACCGCCGAAAGGAG+CGG | - | chr3_4:35391852-35391871 | None:intergenic | 65.0% | |
TCGTCACGGATCACGGCGAG+TGG | - | chr3_4:35391869-35391888 | None:intergenic | 65.0% | |
ATCGGCGAGGAGATGACCGG+AGG | - | chr3_4:35391951-35391970 | None:intergenic | 65.0% | |
TCCTCGCCGATACCGTCTGG+CGG | + | chr3_4:35391960-35391979 | Msa0498570:CDS | 65.0% | |
GGGGTTCCGCCAGACGGTAT+CGG | - | chr3_4:35391969-35391988 | None:intergenic | 65.0% | |
GATACCGTCTGGCGGAACCC+CGG | + | chr3_4:35391968-35391987 | Msa0498570:CDS | 65.0% | |
! | TGCGGGAGCTCTAGTGCACC+GGG | - | chr3_4:35392858-35392877 | None:intergenic | 65.0% |
GCTCCCGCATATGCAGGGTC+CGG | + | chr3_4:35392869-35392888 | Msa0498570:intron | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | + | chr3_4:35392870-35392889 | Msa0498570:intron | 65.0% | |
CGCATATGCAGGGTCCGGGA+AGG | + | chr3_4:35392874-35392893 | Msa0498570:intron | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | + | chr3_4:35392889-35392908 | Msa0498570:intron | 65.0% | |
TGTGGAGCCGCCACGGTGTA+TGG | + | chr3_4:35393189-35393208 | Msa0498570:CDS | 65.0% | |
! | GGGAGATGGTGGTGAGGAGG+AGG | + | chr3_4:35393267-35393286 | Msa0498570:CDS | 65.0% |
TGGTGAGGAGGAGGATGCGG+CGG | + | chr3_4:35393276-35393295 | Msa0498570:CDS | 65.0% | |
GAGGACGGTGTGCAGAGGCT+TGG | + | chr3_4:35393313-35393332 | Msa0498570:CDS | 65.0% | |
GACGGTGTGCAGAGGCTTGG+TGG | + | chr3_4:35393316-35393335 | Msa0498570:CDS | 65.0% | |
! | GGACGGGCTCATAGGGTGCT+TGG | + | chr3_4:35396969-35396988 | Msa0498570:intron | 65.0% |
! | GAAGCAGGCAGAGGTGCGGT+TGG | + | chr3_4:35399878-35399897 | Msa0498570:intron | 65.0% |
ATCGCCGCCGCTCCTTTCGG+CGG | + | chr3_4:35391842-35391861 | Msa0498570:CDS | 70.0% | |
TGGACCGCCGAAAGGAGCGG+CGG | - | chr3_4:35391849-35391868 | None:intergenic | 70.0% | |
ACGGCGAGTGGACCGCCGAA+AGG | - | chr3_4:35391857-35391876 | None:intergenic | 70.0% | |
! | GAGCGGACTCGCCGTGAAGC+TGG | - | chr3_4:35391904-35391923 | None:intergenic | 70.0% |
GGCGAGGAGATGACCGGAGG+AGG | - | chr3_4:35391948-35391967 | None:intergenic | 70.0% | |
!! | TCCGCCAGACGGTATCGGCG+AGG | - | chr3_4:35391964-35391983 | None:intergenic | 70.0% |
CGTGGCGGCTCCACAATCCC+CGG | - | chr3_4:35393184-35393203 | None:intergenic | 70.0% | |
CGGGGATTGTGGAGCCGCCA+CGG | + | chr3_4:35393182-35393201 | Msa0498570:CDS | 70.0% | |
GGAGCCGCCACGGTGTATGG+CGG | + | chr3_4:35393192-35393211 | Msa0498570:CDS | 70.0% | |
ACCGTCTGGCGGAACCCCGG+CGG | + | chr3_4:35391971-35391990 | Msa0498570:CDS | 75.0% | |
ACCGCCGGGGTTCCGCCAGA+CGG | - | chr3_4:35391975-35391994 | None:intergenic | 75.0% | |
TCTGGCGGAACCCCGGCGGT+AGG | + | chr3_4:35391975-35391994 | Msa0498570:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 35391623 | 35404931 | 35391623 | ID=Msa0498570;Name=Msa0498570 |
chr3_4 | mRNA | 35391623 | 35404931 | 35391623 | ID=Msa0498570-mRNA-1;Parent=Msa0498570;Name=Msa0498570-mRNA-1;_AED=0.08;_eAED=0.08;_QI=108|0.93|0.93|1|1|1|16|249|856 |
chr3_4 | exon | 35391623 | 35392109 | 35391623 | ID=Msa0498570-mRNA-1:exon:7393;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35393050 | 35393474 | 35393050 | ID=Msa0498570-mRNA-1:exon:7394;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35394137 | 35394427 | 35394137 | ID=Msa0498570-mRNA-1:exon:7395;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35395466 | 35395605 | 35395466 | ID=Msa0498570-mRNA-1:exon:7396;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35395759 | 35395864 | 35395759 | ID=Msa0498570-mRNA-1:exon:7397;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35395943 | 35396035 | 35395943 | ID=Msa0498570-mRNA-1:exon:7398;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35398204 | 35398293 | 35398204 | ID=Msa0498570-mRNA-1:exon:7399;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35398375 | 35398488 | 35398375 | ID=Msa0498570-mRNA-1:exon:7400;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35398638 | 35398763 | 35398638 | ID=Msa0498570-mRNA-1:exon:7401;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35398852 | 35398925 | 35398852 | ID=Msa0498570-mRNA-1:exon:7402;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35400956 | 35401010 | 35400956 | ID=Msa0498570-mRNA-1:exon:7403;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35401425 | 35401606 | 35401425 | ID=Msa0498570-mRNA-1:exon:7404;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35402042 | 35402171 | 35402042 | ID=Msa0498570-mRNA-1:exon:7405;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35402363 | 35402465 | 35402363 | ID=Msa0498570-mRNA-1:exon:7406;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35403664 | 35403761 | 35403664 | ID=Msa0498570-mRNA-1:exon:7407;Parent=Msa0498570-mRNA-1 |
chr3_4 | exon | 35404518 | 35404931 | 35404518 | ID=Msa0498570-mRNA-1:exon:7408;Parent=Msa0498570-mRNA-1 |
chr3_4 | five_prime_UTR | 35391623 | 35391730 | 35391623 | ID=Msa0498570-mRNA-1:five_prime_utr;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35391731 | 35392109 | 35391731 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35393050 | 35393474 | 35393050 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35394137 | 35394427 | 35394137 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35395466 | 35395605 | 35395466 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35395759 | 35395864 | 35395759 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35395943 | 35396035 | 35395943 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35398204 | 35398293 | 35398204 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35398375 | 35398488 | 35398375 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35398638 | 35398763 | 35398638 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35398852 | 35398925 | 35398852 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35400956 | 35401010 | 35400956 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35401425 | 35401606 | 35401425 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35402042 | 35402171 | 35402042 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35402363 | 35402465 | 35402363 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35403664 | 35403761 | 35403664 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | CDS | 35404518 | 35404682 | 35404518 | ID=Msa0498570-mRNA-1:cds;Parent=Msa0498570-mRNA-1 |
chr3_4 | three_prime_UTR | 35404683 | 35404931 | 35404683 | ID=Msa0498570-mRNA-1:three_prime_utr;Parent=Msa0498570-mRNA-1 |
Gene Sequence |
Protein sequence |