Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0438630 | XP_003599782.2 | 99.450 | 727 | 1 | 1 | 6 | 732 | 127 | 850 | 0.0 | 1485 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0438630 | sp|Q93VQ0|VCL1_ARATH | 73.396 | 748 | 162 | 9 | 6 | 732 | 127 | 858 | 0.0 | 1105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0438630 | G7IXE7 | 99.450 | 727 | 1 | 1 | 6 | 732 | 127 | 850 | 0.0 | 1485 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0137120 | Msa0438630 | 0.807875 | 4.082258e-50 | -8.615850e-47 |
| Msa0229140 | Msa0438630 | 0.926687 | 3.328235e-91 | -8.615850e-47 |
| Msa0405660 | Msa0438630 | 0.924446 | 6.965710e-90 | -8.615850e-47 |
| Msa0414070 | Msa0438630 | -0.803124 | 4.048474e-49 | -8.615850e-47 |
| Msa0438630 | Msa0498570 | 0.893590 | 5.456895e-75 | -8.615850e-47 |
| Msa0438630 | Msa0524890 | 0.818731 | 1.681669e-52 | -8.615850e-47 |
| Msa0438630 | Msa0524970 | 0.805350 | 1.393016e-49 | -8.615850e-47 |
| Msa0438630 | Msa0531990 | 0.856814 | 2.494863e-62 | -8.615850e-47 |
| Msa0438630 | Msa0532100 | 0.858668 | 7.036375e-63 | -8.615850e-47 |
| Msa0438630 | Msa0660880 | 0.809025 | 2.320285e-50 | -8.615850e-47 |
| Msa0438630 | Msa0669990 | -0.802564 | 5.283453e-49 | -8.615850e-47 |
| Msa0438630 | Msa0688110 | -0.800727 | 1.258557e-48 | -8.615850e-47 |
| Msa0438630 | Msa0701840 | 0.830861 | 2.313255e-55 | -8.615850e-47 |
| Msa0438630 | Msa0714600 | -0.800361 | 1.494227e-48 | -8.615850e-47 |
| Msa0438630 | Msa0716740 | 0.808003 | 3.833287e-50 | -8.615850e-47 |
| Msa0438630 | Msa0799290 | 0.800102 | 1.687358e-48 | -8.615850e-47 |
| Msa0438630 | Msa0837510 | 0.802138 | 6.467274e-49 | -8.615850e-47 |
| Msa0438630 | Msa0844900 | -0.803390 | 3.567456e-49 | -8.615850e-47 |
| Msa0438630 | Msa0951720 | -0.803827 | 2.895386e-49 | -8.615850e-47 |
| Msa0438630 | Msa0961420 | 0.818734 | 1.679456e-52 | -8.615850e-47 |
| Msa0438630 | Msa1207480 | 0.803713 | 3.056938e-49 | -8.615850e-47 |
| Msa0438630 | Msa1222030 | 0.817274 | 3.589767e-52 | -8.615850e-47 |
| Msa0258670 | Msa0438630 | 0.808581 | 2.886253e-50 | -8.615850e-47 |
| Msa0326670 | Msa0438630 | -0.811280 | 7.574545e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0438630 | MtrunA17_Chr3g0096061 | 98.904 | 730 | 2 | 2 | 6 | 732 | 127 | 853 | 0.0 | 1474 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0438630 | AT2G38020.1 | 73.396 | 748 | 162 | 9 | 6 | 732 | 127 | 858 | 0.0 | 1105 |
| Msa0438630 | AT2G38020.2 | 74.170 | 693 | 149 | 6 | 6 | 678 | 127 | 809 | 0.0 | 1050 |
Find 188 sgRNAs with CRISPR-Local
Find 764 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGTGAAAACAGAATTTA+AGG | 0.173476 | 3_3:-3249065 | Msa0438630:intron |
| TGGATGCTGTTCTGCTTTAC+TGG | 0.199058 | 3_3:-3257011 | Msa0438630:CDS |
| TTCTCGAGGGTCTGCAAGTT+TGG | 0.242669 | 3_3:+3247457 | None:intergenic |
| CTTCTTCTCCTATGCTTAAC+AGG | 0.253059 | 3_3:+3252541 | None:intergenic |
| CGCGGTGAAGTTGGCTGATC+CGG | 0.270998 | 3_3:-3258023 | Msa0438630:CDS |
| AGGCAACCGTTGGAGTTCTT+TGG | 0.274994 | 3_3:-3252355 | Msa0438630:CDS |
| CGAATTGATCGAAAATAAAT+AGG | 0.276973 | 3_3:+3246466 | None:intergenic |
| CACTCAGGAATAAGAATTAT+TGG | 0.279696 | 3_3:+3256928 | None:intergenic |
| TCTTAGTATTCAGCAATATA+AGG | 0.297573 | 3_3:-3255342 | Msa0438630:intron |
| CTCCTAAGGGCAGCCAGTTA+TGG | 0.308461 | 3_3:-3255617 | Msa0438630:CDS |
| ATGTTGCTGATTGTGCGTTT+TGG | 0.320723 | 3_3:-3258114 | Msa0438630:CDS |
| AGGATGTGGCATTTCTTCTT+TGG | 0.326758 | 3_3:-3249792 | Msa0438630:CDS |
| TAATATTTGATTATTGTAAC+AGG | 0.331307 | 3_3:-3258157 | None:intergenic |
| AAGGACTTCTTCTTATCAAC+AGG | 0.338458 | 3_3:-3250237 | Msa0438630:CDS |
| GAATTATTGGTTCGTCATAA+AGG | 0.341901 | 3_3:+3256941 | None:intergenic |
| GATATTGTCCAATGCTAGTA+TGG | 0.344621 | 3_3:-3256893 | Msa0438630:CDS |
| TCCTAAGGGCAGCCAGTTAT+GGG | 0.348083 | 3_3:-3255616 | Msa0438630:CDS |
| TTCCACCTGTTTAGATGAAC+GGG | 0.348566 | 3_3:+3252715 | None:intergenic |
| TTGATTCATTCCGAGATATT+CGG | 0.351522 | 3_3:+3255172 | None:intergenic |
| AGCAGCATCCGCAGCTTCCT+TGG | 0.359277 | 3_3:+3246647 | None:intergenic |
| ACAAAAGGCCTGCCCATAAC+TGG | 0.360955 | 3_3:+3255604 | None:intergenic |
| TCTCGAGGGTCTGCAAGTTT+GGG | 0.366487 | 3_3:+3247458 | None:intergenic |
| GAAGAGATGGTATTGGCTTA+AGG | 0.372569 | 3_3:-3248844 | Msa0438630:CDS |
| TTCCTCCAGAGCAGCTTGCT+TGG | 0.373313 | 3_3:-3257041 | Msa0438630:CDS |
| TGTGGAGCCGCCACGGTGTA+TGG | 0.381850 | 3_3:-3257996 | Msa0438630:CDS |
| TTCTTCTTTGGAAAGAATCA+TGG | 0.384884 | 3_3:-3249780 | Msa0438630:CDS |
| GAGCCGCAGTATACGGTGTC+TGG | 0.388055 | 3_3:-3257965 | Msa0438630:CDS |
| GATGTTGGTGAGCATTTATC+AGG | 0.390074 | 3_3:+3255213 | None:intergenic |
| TGCTAATTGTCTGGCCTGTA+TGG | 0.391082 | 3_3:+3252330 | None:intergenic |
| CCACACCAAGCAAGCTGCTC+TGG | 0.392027 | 3_3:+3257036 | None:intergenic |
| TCTAGAGATTCTGCTTGATA+AGG | 0.399103 | 3_3:-3252915 | Msa0438630:intron |
| TCAGCCAACTTCACCGCGTT+AGG | 0.401454 | 3_3:+3258028 | None:intergenic |
| TGCTAAGATAACTGCGTCAT+TGG | 0.410927 | 3_3:-3252957 | Msa0438630:CDS |
| TAGGTAACCGGTTCTCCATC+AGG | 0.411163 | 3_3:+3256964 | None:intergenic |
| TGATTCAAAGGTATGTTCCT+TGG | 0.412852 | 3_3:+3249663 | None:intergenic |
| ACAGTTTCAATCTTCACAAT+TGG | 0.427477 | 3_3:-3256844 | Msa0438630:CDS |
| TCAATGCATGCCTCGACAAA+TGG | 0.430793 | 3_3:+3247515 | None:intergenic |
| CTTACACCATCTGTCCTGAT+TGG | 0.435960 | 3_3:-3255239 | Msa0438630:CDS |
| CTCTGGCCACAATCAAGGAC+TGG | 0.436871 | 3_3:-3248815 | Msa0438630:CDS |
| CAGAAATTCCATACTAGCAT+TGG | 0.439342 | 3_3:+3256885 | None:intergenic |
| CAAGCAAGGCAGCTAACTTT+CGG | 0.439766 | 3_3:+3252750 | None:intergenic |
| TTACTTGGTGTGGGAGATGG+TGG | 0.441418 | 3_3:-3257929 | Msa0438630:CDS |
| GGGAGATGGTGGTGAGGAGG+AGG | 0.444591 | 3_3:-3257918 | Msa0438630:CDS |
| TGAACCCCGTTCATCTAAAC+AGG | 0.444597 | 3_3:-3252720 | Msa0438630:intron |
| TGGTGGTGAGGAGGAGGATG+CGG | 0.446772 | 3_3:-3257912 | Msa0438630:CDS |
| CATTTATCAGGCGACCAATC+AGG | 0.447792 | 3_3:+3255225 | None:intergenic |
| TAGTATGGAATTTCTGCAAC+GGG | 0.449925 | 3_3:-3256878 | Msa0438630:CDS |
| TGTCTCTTTGATCATGTAAG+AGG | 0.451821 | 3_3:+3246361 | None:intergenic |
| ATGCATTGAAGCAGATGAAA+AGG | 0.452861 | 3_3:-3247501 | Msa0438630:CDS |
| CTTGCGTCATTTACTCATGA+TGG | 0.454216 | 3_3:-3257791 | Msa0438630:CDS |
| GGACAGTCGTATGCTCGAAT+TGG | 0.456669 | 3_3:-3246675 | Msa0438630:intron |
| GGAGTTCTTTGGAACCATAC+AGG | 0.459956 | 3_3:-3252344 | Msa0438630:CDS |
| TGGTGTCACGGGATGGGAAG+TGG | 0.460977 | 3_3:-3257814 | Msa0438630:CDS |
| GCCCATAACTGGCTGCCCTT+AGG | 0.467629 | 3_3:+3255615 | None:intergenic |
| AATCCGGACTTGTATTGTCC+TGG | 0.468046 | 3_3:-3249107 | Msa0438630:CDS |
| CAGCCAACTTCACCGCGTTA+GGG | 0.469202 | 3_3:+3258029 | None:intergenic |
| CTCAGCTGCCTTTGATTCAA+AGG | 0.470260 | 3_3:+3249651 | None:intergenic |
| GGTTATTGAGCCGCAGTATA+CGG | 0.474902 | 3_3:-3257972 | Msa0438630:CDS |
| TAAGTCCCGTGCTAATTGTC+TGG | 0.474919 | 3_3:+3252321 | None:intergenic |
| GTTACTACGTCGGATTTGAC+TGG | 0.477285 | 3_3:-3257758 | Msa0438630:CDS |
| TTCTAAAACTTACCTATTGG+AGG | 0.477730 | 3_3:+3248759 | None:intergenic |
| GACGGTGTGCAGAGGCTTGG+TGG | 0.478653 | 3_3:-3257869 | Msa0438630:CDS |
| AAACCCTAACGCGGTGAAGT+TGG | 0.478744 | 3_3:-3258032 | Msa0438630:CDS |
| CGCGCCAACGAACTCTCCTA+AGG | 0.480577 | 3_3:-3255631 | Msa0438630:CDS |
| GCGGTGAAGTTGGCTGATCC+GGG | 0.483726 | 3_3:-3258022 | Msa0438630:CDS |
| AAATCAAGCTTACCTACAAA+AGG | 0.483898 | 3_3:+3255589 | None:intergenic |
| GGATGCTGTTCTGCTTTACT+GGG | 0.487993 | 3_3:-3257010 | Msa0438630:CDS |
| CAAGTATAAGTGACACAATC+CGG | 0.488003 | 3_3:-3249123 | Msa0438630:CDS |
| TGGTCACTTCAAGTTCATGC+TGG | 0.488318 | 3_3:+3249170 | None:intergenic |
| AAGGAGAAGAAACCTCCAAT+AGG | 0.489908 | 3_3:-3248771 | Msa0438630:intron |
| AAGAGGACCGTTGCAGAAGA+TGG | 0.490500 | 3_3:-3257837 | Msa0438630:CDS |
| GATGGGCCCTGATGGAGAAC+CGG | 0.492155 | 3_3:-3256971 | Msa0438630:CDS |
| ACGCAGCTCGATGATTTCCC+AGG | 0.493746 | 3_3:+3249089 | None:intergenic |
| TACGAGGAGGCAGAAAAGTC+AGG | 0.496988 | 3_3:+3246496 | None:intergenic |
| CCAGAGCAGCTTGCTTGGTG+TGG | 0.497588 | 3_3:-3257036 | Msa0438630:CDS |
| TTCCCAGGACAATACAAGTC+CGG | 0.498893 | 3_3:+3249104 | None:intergenic |
| AGCAAGGGATCTCCACTTCA+TGG | 0.501761 | 3_3:-3249733 | Msa0438630:CDS |
| TGTGGGAGATGGTGGTGAGG+AGG | 0.503509 | 3_3:-3257921 | Msa0438630:CDS |
| TGGAGATCCCTTGCTTGCCA+TGG | 0.506046 | 3_3:+3249741 | None:intergenic |
| AAGATTGAAACTGTGGAGTC+AGG | 0.507333 | 3_3:+3256853 | None:intergenic |
| TGCGGCGGTGATTGCAGTTG+AGG | 0.511307 | 3_3:-3257894 | Msa0438630:CDS |
| GGAGATCCCTTGCTTGCCAT+GGG | 0.511908 | 3_3:+3249742 | None:intergenic |
| TCGTCATAAAGGTAGGTAAC+CGG | 0.512033 | 3_3:+3256952 | None:intergenic |
| TCTTCTTTGGAAAGAATCAT+GGG | 0.514000 | 3_3:-3249779 | Msa0438630:CDS |
| GGAACATACCTTTGAATCAA+AGG | 0.514086 | 3_3:-3249659 | Msa0438630:CDS |
| AGAAGATACAGCCTTGATGA+AGG | 0.515874 | 3_3:-3252523 | Msa0438630:CDS |
| AAGGGCAGCCAGTTATGGGC+AGG | 0.516825 | 3_3:-3255612 | Msa0438630:CDS |
| GAGGACGGTGTGCAGAGGCT+TGG | 0.516868 | 3_3:-3257872 | Msa0438630:CDS |
| ATGAGCAGCAACTGCTGCAT+AGG | 0.517654 | 3_3:+3252790 | None:intergenic |
| AAATGGCGTCGTTTGTATAA+CGG | 0.519833 | 3_3:-3258089 | Msa0438630:CDS |
| TGCAGAAGATGGTGGTGTCA+CGG | 0.520389 | 3_3:-3257826 | Msa0438630:CDS |
| TTATATTGCTGAATACTAAG+AGG | 0.525483 | 3_3:+3255344 | None:intergenic |
| TCGAATAAAACTTATTGAGA+AGG | 0.527366 | 3_3:-3249707 | Msa0438630:CDS |
| CTGCCCTTAGGAGAGTTCGT+TGG | 0.528383 | 3_3:+3255627 | None:intergenic |
| GTTGGCTGATCCGGGGATTG+TGG | 0.529245 | 3_3:-3258014 | Msa0438630:CDS |
| CGTCATTTACTCATGATGGC+CGG | 0.529492 | 3_3:-3257787 | Msa0438630:CDS |
| CACCAAGCAAGCTGCTCTGG+AGG | 0.533015 | 3_3:+3257039 | None:intergenic |
| AGATGGTGGTGTCACGGGAT+GGG | 0.533613 | 3_3:-3257820 | Msa0438630:CDS |
| GTCGTATGCTCGAATTGGTA+TGG | 0.537967 | 3_3:-3246670 | Msa0438630:CDS |
| GGCAGCCCAGTCCTTGATTG+TGG | 0.538088 | 3_3:+3248809 | None:intergenic |
| ACACATGCTTCAACAGCCTC+AGG | 0.541349 | 3_3:+3255683 | None:intergenic |
| AGCCGCAGTATACGGTGTCT+GGG | 0.544978 | 3_3:-3257964 | Msa0438630:CDS |
| CGGGGATTGTGGAGCCGCCA+CGG | 0.546561 | 3_3:-3258003 | Msa0438630:CDS |
| ATTCCACCTGTTTAGATGAA+CGG | 0.548796 | 3_3:+3252714 | None:intergenic |
| ATCTCTAGAAGAGTAGCATC+GGG | 0.550017 | 3_3:+3252929 | None:intergenic |
| GTCTCTTTGATCATGTAAGA+GGG | 0.550254 | 3_3:+3246362 | None:intergenic |
| AAGATGGTGGTGTCACGGGA+TGG | 0.552664 | 3_3:-3257821 | Msa0438630:CDS |
| GCAGAAGATGGTGGTGTCAC+GGG | 0.552876 | 3_3:-3257825 | Msa0438630:CDS |
| TCAAAAGACGGTGAGTTGCT+TGG | 0.554692 | 3_3:-3246618 | Msa0438630:CDS |
| TGGTGTGGGAGATGGTGGTG+AGG | 0.554808 | 3_3:-3257924 | Msa0438630:CDS |
| ATCCGGACTTGTATTGTCCT+GGG | 0.555622 | 3_3:-3249106 | Msa0438630:CDS |
| TTTATTCGAGGACCATGAAG+TGG | 0.556071 | 3_3:+3249721 | None:intergenic |
| TGTCGGAGAAGAGATGGTAT+TGG | 0.556366 | 3_3:-3248851 | Msa0438630:CDS |
| AAGACGGTGAGTTGCTTGGT+CGG | 0.558308 | 3_3:-3246614 | Msa0438630:CDS |
| TACCACATTAACCTCAGATA+AGG | 0.558565 | 3_3:+3246410 | None:intergenic |
| ATTCTTATTCCTGAGTGCGA+TGG | 0.559064 | 3_3:-3256922 | Msa0438630:CDS |
| TATTGGTTCGTCATAAAGGT+AGG | 0.559582 | 3_3:+3256945 | None:intergenic |
| GTTCCTCTCCTGTTAAGCAT+AGG | 0.561921 | 3_3:-3252549 | Msa0438630:CDS |
| TCTGGCCACAATCAAGGACT+GGG | 0.562575 | 3_3:-3248814 | Msa0438630:CDS |
| CTTGGTGGTGAGATGCTAAG+AGG | 0.563154 | 3_3:-3257854 | Msa0438630:CDS |
| AGAAATGTGTAAAATTCTGC+GGG | 0.563554 | 3_3:-3255402 | Msa0438630:CDS |
| TGCATTGAAGCAGATGAAAA+GGG | 0.563780 | 3_3:-3247500 | Msa0438630:CDS |
| AATCTCTAGAAGAGTAGCAT+CGG | 0.563932 | 3_3:+3252928 | None:intergenic |
| AGGAGGTGGTGATAATGCAC+TGG | 0.564792 | 3_3:-3252985 | Msa0438630:CDS |
| TGCTCGAATTGGTATGGCCA+AGG | 0.566532 | 3_3:-3246664 | Msa0438630:CDS |
| AAGAAATGTGTAAAATTCTG+CGG | 0.567717 | 3_3:-3255403 | Msa0438630:CDS |
| GCAGCTTGCTTGGTGTGGAA+TGG | 0.569731 | 3_3:-3257031 | Msa0438630:CDS |
| TCCGCAATGCAAGCAGATGT+TGG | 0.571309 | 3_3:+3255198 | None:intergenic |
| ATCCTCACTCCATCGCACTC+AGG | 0.575710 | 3_3:+3256913 | None:intergenic |
| ACATTCAGTCGCCTTCATCA+AGG | 0.578060 | 3_3:+3252512 | None:intergenic |
| GCGTCATACAGCAAAGCTGC+GGG | 0.580917 | 3_3:+3256811 | None:intergenic |
| ACTTGAAGTGACCACAAAGC+AGG | 0.580954 | 3_3:-3249161 | Msa0438630:CDS |
| CTTTGAATCAAAGGCAGCTG+AGG | 0.582645 | 3_3:-3249650 | Msa0438630:CDS |
| GATGATGCAGAGGCAACCGT+TGG | 0.584115 | 3_3:-3252365 | Msa0438630:intron |
| CTAGTATGGAATTTCTGCAA+CGG | 0.584740 | 3_3:-3256879 | Msa0438630:CDS |
| TACAGGTGTCGGAGAAGAGA+TGG | 0.586198 | 3_3:-3248857 | Msa0438630:intron |
| AGGTTATAGGCCATTTGTCG+AGG | 0.587978 | 3_3:-3247525 | Msa0438630:CDS |
| CGTGGCGGCTCCACAATCCC+CGG | 0.588150 | 3_3:+3258004 | None:intergenic |
| TACGGTGTCTGGGAATGTTG+AGG | 0.590077 | 3_3:-3257954 | Msa0438630:CDS |
| GTGATTGCAGTTGAGGAGGA+CGG | 0.591821 | 3_3:-3257887 | Msa0438630:CDS |
| TTCCTGAGTGCGATGGAGTG+AGG | 0.596415 | 3_3:-3256915 | Msa0438630:CDS |
| ATGCTTCAACAGCCTCAGGA+AGG | 0.598204 | 3_3:+3255687 | None:intergenic |
| TACAGGCCAGACAATTAGCA+CGG | 0.598484 | 3_3:-3252327 | Msa0438630:CDS |
| TGGTGAGGAGGAGGATGCGG+CGG | 0.599087 | 3_3:-3257909 | Msa0438630:CDS |
| GCAGTGCGCAGCTTTGAGAT+CGG | 0.602610 | 3_3:-3255371 | Msa0438630:CDS |
| GACACCACCATCTTCTGCAA+CGG | 0.602911 | 3_3:+3257830 | None:intergenic |
| TACCTTATCTGAGGTTAATG+TGG | 0.602974 | 3_3:-3246412 | Msa0438630:three_prime_UTR |
| AGGCGACCAATCAGGACAGA+TGG | 0.604026 | 3_3:+3255233 | None:intergenic |
| CTCTTTGATCATGTAAGAGG+GGG | 0.605434 | 3_3:+3246364 | None:intergenic |
| ACTTATTTATAACTTATGCA+CGG | 0.605925 | 3_3:-3252303 | Msa0438630:intron |
| GAAGCATGTGTTGATGCTGC+AGG | 0.606318 | 3_3:-3255671 | Msa0438630:CDS |
| CCGGCTTCTTGTTACTACGT+CGG | 0.606461 | 3_3:-3257768 | Msa0438630:CDS |
| AGGTAACCGGTTCTCCATCA+GGG | 0.607086 | 3_3:+3256965 | None:intergenic |
| GGCGGTGATTGCAGTTGAGG+AGG | 0.608076 | 3_3:-3257891 | Msa0438630:CDS |
| GACTGGTGTTATCATCGAGA+GGG | 0.609135 | 3_3:-3257741 | Msa0438630:CDS |
| GGGTTCATGTTCAACAAGCA+AGG | 0.610938 | 3_3:+3252736 | None:intergenic |
| TGCTTCAACAGCCTCAGGAA+GGG | 0.613074 | 3_3:+3255688 | None:intergenic |
| TTGAGGAGGACGGTGTGCAG+AGG | 0.614752 | 3_3:-3257877 | Msa0438630:CDS |
| CCGACGTAGTAACAAGAAGC+CGG | 0.616053 | 3_3:+3257768 | None:intergenic |
| TCTCCTATGCTTAACAGGAG+AGG | 0.616681 | 3_3:+3252546 | None:intergenic |
| ATCGAAAATAAATAGGAAAG+CGG | 0.617713 | 3_3:+3246473 | None:intergenic |
| TTGCGGATATCCGAATATCT+CGG | 0.618444 | 3_3:-3255182 | Msa0438630:CDS |
| CGCGTCATACAGCAAAGCTG+CGG | 0.620218 | 3_3:+3256810 | None:intergenic |
| ACCAACATCTGCTTGCATTG+CGG | 0.622579 | 3_3:-3255199 | Msa0438630:CDS |
| GCGCCAACGAACTCTCCTAA+GGG | 0.630802 | 3_3:-3255630 | Msa0438630:CDS |
| TTGATGAAGGCGACTGAATG+TGG | 0.633961 | 3_3:-3252510 | Msa0438630:CDS |
| TGACTGGTGTTATCATCGAG+AGG | 0.637654 | 3_3:-3257742 | Msa0438630:CDS |
| CGGTGAAGTTGGCTGATCCG+GGG | 0.639768 | 3_3:-3258021 | Msa0438630:CDS |
| TGGTATGGCCAAGGAAGCTG+CGG | 0.640973 | 3_3:-3246655 | Msa0438630:CDS |
| AGGACTTCTTCTTATCAACA+GGG | 0.646073 | 3_3:-3250236 | Msa0438630:CDS |
| TCTCAGTTAAAAGTGTGCAA+AGG | 0.649118 | 3_3:-3252818 | Msa0438630:intron |
| ACAGGCCAGACAATTAGCAC+GGG | 0.649292 | 3_3:-3252326 | Msa0438630:CDS |
| GATAAGATCGTCCCTTCCTG+AGG | 0.650860 | 3_3:-3255699 | Msa0438630:CDS |
| GCAAGGCAGCTAACTTTCGG+CGG | 0.651634 | 3_3:+3252753 | None:intergenic |
| TCTCTTTGATCATGTAAGAG+GGG | 0.654355 | 3_3:+3246363 | None:intergenic |
| ATGGTTCCAAAGAACTCCAA+CGG | 0.655891 | 3_3:+3252349 | None:intergenic |
| GGAGCCGCCACGGTGTATGG+CGG | 0.656611 | 3_3:-3257993 | Msa0438630:CDS |
| GCTGCTGCACAGTCAAAAGA+CGG | 0.657054 | 3_3:-3246630 | Msa0438630:CDS |
| TATCATCGAGAGGGAGTGCG+AGG | 0.667435 | 3_3:-3257732 | Msa0438630:intron |
| AATTGTGAAGATTGAAACTG+TGG | 0.675128 | 3_3:+3256846 | None:intergenic |
| AGGACCGTTGCAGAAGATGG+TGG | 0.678490 | 3_3:-3257834 | Msa0438630:CDS |
| TTCCCAGACACCGTATACTG+CGG | 0.689357 | 3_3:+3257962 | None:intergenic |
| AATAGGAAAGCGGTACGAGG+AGG | 0.697951 | 3_3:+3246483 | None:intergenic |
| GGAGGTGGTGATAATGCACT+GGG | 0.702431 | 3_3:-3252984 | Msa0438630:CDS |
| ATAAATAGGAAAGCGGTACG+AGG | 0.702780 | 3_3:+3246480 | None:intergenic |
| TCCACCTGTTTAGATGAACG+GGG | 0.712415 | 3_3:+3252716 | None:intergenic |
| TCAATAACCGCCATACACCG+TGG | 0.722018 | 3_3:+3257986 | None:intergenic |
| ATAACCGCCATACACCGTGG+CGG | 0.766199 | 3_3:+3257989 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAATTATTTTTAAAAAT+TGG | + | chr3_3:3250677-3250696 | None:intergenic | 0.0% |
| !!! | TTTTTAAAAATAATTTATTT+TGG | - | chr3_3:3250678-3250697 | Msa0438630:intron | 0.0% |
| !! | ATAAATAAAAAATTATATTA+TGG | + | chr3_3:3257673-3257692 | None:intergenic | 0.0% |
| !! | TCATAATAATTAACAAAATT+GGG | + | chr3_3:3247213-3247232 | None:intergenic | 10.0% |
| !! | ATCATAATAATTAACAAAAT+TGG | + | chr3_3:3247214-3247233 | None:intergenic | 10.0% |
| !! | ACTTATATTCATTAAATATA+GGG | + | chr3_3:3248166-3248185 | None:intergenic | 10.0% |
| !!! | AAACAATTTTTCAAATATTT+TGG | + | chr3_3:3248889-3248908 | None:intergenic | 10.0% |
| !!! | ATCTGATTTTATTAAAAAAA+AGG | + | chr3_3:3249432-3249451 | None:intergenic | 10.0% |
| !! | TATTATTAAAGATTATCATT+TGG | + | chr3_3:3249629-3249648 | None:intergenic | 10.0% |
| !! | CCAAAAATAAAATAAAATAA+AGG | + | chr3_3:3250125-3250144 | None:intergenic | 10.0% |
| !!! | CCTTTATTTTATTTTATTTT+TGG | - | chr3_3:3250122-3250141 | Msa0438630:intron | 10.0% |
| !!! | TATTTTATTTTATTTTTGGA+TGG | - | chr3_3:3250126-3250145 | Msa0438630:intron | 10.0% |
| !! | CTATAAAATTAAAATAATTC+AGG | + | chr3_3:3253600-3253619 | None:intergenic | 10.0% |
| !! | TCTTAATCATAATTAAATAA+GGG | + | chr3_3:3253896-3253915 | None:intergenic | 10.0% |
| !! | TTCTTAATCATAATTAAATA+AGG | + | chr3_3:3253897-3253916 | None:intergenic | 10.0% |
| !! | TCTTTAAATATTAAAATTAG+AGG | - | chr3_3:3253958-3253977 | Msa0438630:intron | 10.0% |
| !!! | TAATTCAAAGATTTATTTTA+TGG | + | chr3_3:3254857-3254876 | None:intergenic | 10.0% |
| !! | AAATTATTATTGTTTATTTG+AGG | + | chr3_3:3256336-3256355 | None:intergenic | 10.0% |
| !!! | ACAATAATAATTTTATTATG+AGG | - | chr3_3:3256343-3256362 | Msa0438630:intron | 10.0% |
| !! | ATTTAAGAAATTAGAATGAT+TGG | - | chr3_3:3246981-3247000 | Msa0438630:intron | 15.0% |
| !! | TTTAAGAAATTAGAATGATT+GGG | - | chr3_3:3246982-3247001 | Msa0438630:intron | 15.0% |
| !! | TCAAAAGAATTATATTAAGA+TGG | + | chr3_3:3247990-3248009 | None:intergenic | 15.0% |
| !! | CACTTATATTCATTAAATAT+AGG | + | chr3_3:3248167-3248186 | None:intergenic | 15.0% |
| !! | CTATATTTAATGAATATAAG+TGG | - | chr3_3:3248165-3248184 | Msa0438630:intron | 15.0% |
| !!! | TTCTTTAAAAAGTCTAATAA+AGG | + | chr3_3:3248399-3248418 | None:intergenic | 15.0% |
| !! | GTTTATACATTTAATGATAT+AGG | - | chr3_3:3249775-3249794 | Msa0438630:CDS | 15.0% |
| !!! | TTATTTTAACAAAGTTACAA+AGG | - | chr3_3:3249914-3249933 | Msa0438630:intron | 15.0% |
| !! | ATTGAAAATCTAAAAATTGA+TGG | - | chr3_3:3249995-3250014 | Msa0438630:intron | 15.0% |
| !! | GATGAAAATATTAGATATAA+TGG | + | chr3_3:3250465-3250484 | None:intergenic | 15.0% |
| !! | ACAATCTAAATATAATAAGA+TGG | + | chr3_3:3250900-3250919 | None:intergenic | 15.0% |
| !! | ATATTTAGATTGTTTATGTA+AGG | - | chr3_3:3250907-3250926 | Msa0438630:intron | 15.0% |
| !!! | TTACCATATTTTTTTTTCAA+AGG | - | chr3_3:3251134-3251153 | Msa0438630:intron | 15.0% |
| !!! | TAACCTTTGAAAAAAAAATA+TGG | + | chr3_3:3251140-3251159 | None:intergenic | 15.0% |
| !!! | TATATATTTTAAATGTTGTC+AGG | - | chr3_3:3251989-3252008 | Msa0438630:intron | 15.0% |
| !!! | ATTTGATAACATGTTTTTAA+CGG | - | chr3_3:3253205-3253224 | Msa0438630:intron | 15.0% |
| !!! | ACTCTATTGATTATTAAAAA+GGG | + | chr3_3:3254073-3254092 | None:intergenic | 15.0% |
| !! | AAAATGAGATTATTTATCAA+AGG | + | chr3_3:3254147-3254166 | None:intergenic | 15.0% |
| !!! | CTGATTTTGAATATTATATA+CGG | - | chr3_3:3254266-3254285 | Msa0438630:intron | 15.0% |
| !!! | TAACTTTTTTTTTTTTTGCA+CGG | - | chr3_3:3254370-3254389 | Msa0438630:intron | 15.0% |
| !! | ATCACTTAATGATAAATATA+TGG | + | chr3_3:3254914-3254933 | None:intergenic | 15.0% |
| !! | AATAATTGTGAAATTTCAAT+TGG | + | chr3_3:3255107-3255126 | None:intergenic | 15.0% |
| !!! | ACAAGGATTAATAATTTTAT+GGG | + | chr3_3:3255179-3255198 | None:intergenic | 15.0% |
| !!! | AACAAGGATTAATAATTTTA+TGG | + | chr3_3:3255180-3255199 | None:intergenic | 15.0% |
| !! | AGTTTGGATTAATTAATTAA+TGG | - | chr3_3:3255931-3255950 | Msa0438630:intron | 15.0% |
| !! | AAAATTACACTACTAATTAA+TGG | + | chr3_3:3256299-3256318 | None:intergenic | 15.0% |
| !!! | TTTTTTTCTTTTACTATGTT+TGG | - | chr3_3:3256835-3256854 | Msa0438630:CDS | 15.0% |
| !!! | TTTTGTGAATAAAATAAGCT+AGG | - | chr3_3:3246894-3246913 | Msa0438630:intron | 20.0% |
| !! | TAATAATTAACAAAATTGGG+TGG | + | chr3_3:3247210-3247229 | None:intergenic | 20.0% |
| !! | TCATAGATCATAAACAATTA+TGG | + | chr3_3:3247304-3247323 | None:intergenic | 20.0% |
| !!! | ACCTTAAAATTCATTTTTCT+TGG | - | chr3_3:3247893-3247912 | Msa0438630:intron | 20.0% |
| !!! | TTAAAATTCATTTTTCTTGG+CGG | - | chr3_3:3247896-3247915 | Msa0438630:intron | 20.0% |
| !! | AATAATTAACATACATTCCT+TGG | + | chr3_3:3248134-3248153 | None:intergenic | 20.0% |
| !! | GGAATGTATGTTAATTATTT+AGG | - | chr3_3:3248135-3248154 | Msa0438630:intron | 20.0% |
| !!! | CTTTTTAAAGAAACAAACAA+TGG | - | chr3_3:3248407-3248426 | Msa0438630:intron | 20.0% |
| !!! | TACTTTTATCATCCATTATT+GGG | + | chr3_3:3248441-3248460 | None:intergenic | 20.0% |
| !! | TAATTTCGTATTTATGAACT+CGG | + | chr3_3:3249811-3249830 | None:intergenic | 20.0% |
| !! | AGTTCATAAATACGAAATTA+GGG | - | chr3_3:3249811-3249830 | Msa0438630:intron | 20.0% |
| !! | ATATTTCCATAAACAGAATT+AGG | + | chr3_3:3249969-3249988 | None:intergenic | 20.0% |
| !! | AAAATATCAAGAGGAAAAAA+AGG | + | chr3_3:3250345-3250364 | None:intergenic | 20.0% |
| !! | AACACAAGAAAAATCTAAAA+GGG | + | chr3_3:3251180-3251199 | None:intergenic | 20.0% |
| !! | TAACACAAGAAAAATCTAAA+AGG | + | chr3_3:3251181-3251200 | None:intergenic | 20.0% |
| !! | CGCATAAATAAATAAAAATC+TGG | - | chr3_3:3251217-3251236 | Msa0438630:intron | 20.0% |
| !! | AATAAATAAAAATCTGGATG+TGG | - | chr3_3:3251223-3251242 | Msa0438630:intron | 20.0% |
| !! | ACTTATTTATAACTTATGCA+CGG | - | chr3_3:3252126-3252145 | Msa0438630:intron | 20.0% |
| !!! | TTCCTTGTTATGTAATATTA+AGG | - | chr3_3:3252193-3252212 | Msa0438630:intron | 20.0% |
| !! | AACCTTAATATTACATAACA+AGG | + | chr3_3:3252198-3252217 | None:intergenic | 20.0% |
| !! | ATAATGAGTTTGATATTCTT+TGG | - | chr3_3:3252854-3252873 | Msa0438630:intron | 20.0% |
| !! | ACATGTTATCAAATCAAAAA+AGG | + | chr3_3:3253199-3253218 | None:intergenic | 20.0% |
| !! | AAGAAATACTAGTAGTTTAT+AGG | + | chr3_3:3253258-3253277 | None:intergenic | 20.0% |
| !!! | TGAAAGAGTTTTAAATATGT+TGG | - | chr3_3:3253348-3253367 | Msa0438630:intron | 20.0% |
| !!! | TTTTAAATATGTTGGAATCA+TGG | - | chr3_3:3253356-3253375 | Msa0438630:intron | 20.0% |
| !! | TTTAAATATGTTGGAATCAT+GGG | - | chr3_3:3253357-3253376 | Msa0438630:intron | 20.0% |
| !!! | AAAAGGGTTAATTATGTTTT+TGG | + | chr3_3:3253843-3253862 | None:intergenic | 20.0% |
| !!! | GACTCTATTGATTATTAAAA+AGG | + | chr3_3:3254074-3254093 | None:intergenic | 20.0% |
| !!! | TGATAAATAATCTCATTTTC+AGG | - | chr3_3:3254148-3254167 | Msa0438630:intron | 20.0% |
| !!! | CTATAAACATGAATTTTTGA+AGG | - | chr3_3:3254173-3254192 | Msa0438630:intron | 20.0% |
| !!! | TATTTAATTCGTTAAGCTTT+TGG | - | chr3_3:3254875-3254894 | Msa0438630:intron | 20.0% |
| !!! | ATTTAATTCGTTAAGCTTTT+GGG | - | chr3_3:3254876-3254895 | Msa0438630:intron | 20.0% |
| !! | TTAAAGTAGTAACTTTATCT+TGG | - | chr3_3:3255037-3255056 | Msa0438630:intron | 20.0% |
| !! | AAAAGTGAAAACAGAATTTA+AGG | - | chr3_3:3255364-3255383 | Msa0438630:CDS | 20.0% |
| !! | ATATATGTAAAATGTCTACA+CGG | - | chr3_3:3256076-3256095 | Msa0438630:intron | 20.0% |
| !! | TAATACTCTCTTAAATATGA+GGG | + | chr3_3:3256173-3256192 | None:intergenic | 20.0% |
| !! | ATAATACTCTCTTAAATATG+AGG | + | chr3_3:3256174-3256193 | None:intergenic | 20.0% |
| !! | GTTATTATAAGATGTTACTA+GGG | + | chr3_3:3256247-3256266 | None:intergenic | 20.0% |
| !! | TGTTATTATAAGATGTTACT+AGG | + | chr3_3:3256248-3256267 | None:intergenic | 20.0% |
| !! | TATTGTTCGTCAAAATAATA+AGG | + | chr3_3:3256863-3256882 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTAACAGTTTTTG+AGG | - | chr3_3:3257051-3257070 | Msa0438630:CDS | 20.0% |
| !!! | TTGTATATCTTTTCTTATTC+TGG | - | chr3_3:3257733-3257752 | Msa0438630:CDS | 20.0% |
| !!! | TTGTTATTGTGAATTTTGTG+TGG | - | chr3_3:3246763-3246782 | Msa0438630:intron | 25.0% |
| !! | ATACTGTCTTGATAGTTATT+TGG | - | chr3_3:3246868-3246887 | Msa0438630:intron | 25.0% |
| !! | ATGAGATTTTGTAGAATTTG+AGG | - | chr3_3:3247070-3247089 | Msa0438630:intron | 25.0% |
| !! | TGAGATTTTGTAGAATTTGA+GGG | - | chr3_3:3247071-3247090 | Msa0438630:intron | 25.0% |
| !! | GATGATATGCTTTTAATGAT+GGG | - | chr3_3:3247441-3247460 | Msa0438630:intron | 25.0% |
| ! | ACTAACTTCATAAATATCTG+AGG | - | chr3_3:3247708-3247727 | Msa0438630:intron | 25.0% |
| ! | GAATTCAGTAATTCATTTGT+TGG | + | chr3_3:3247785-3247804 | None:intergenic | 25.0% |
| !! | GCCAAGAAAAATGAATTTTA+AGG | + | chr3_3:3247897-3247916 | None:intergenic | 25.0% |
| ! | AAAATTGATGCTCAATATAG+TGG | + | chr3_3:3247955-3247974 | None:intergenic | 25.0% |
| !!! | CTACTTTTATCATCCATTAT+TGG | + | chr3_3:3248442-3248461 | None:intergenic | 25.0% |
| ! | ATGGATGATAAAAGTAGATT+TGG | - | chr3_3:3248445-3248464 | Msa0438630:intron | 25.0% |
| ! | CTGCTAAAAGAATGTAATTA+AGG | + | chr3_3:3248917-3248936 | None:intergenic | 25.0% |
| ! | AAGAAATGTGTAAAATTCTG+CGG | - | chr3_3:3249026-3249045 | Msa0438630:intron | 25.0% |
| ! | TTATATTGCTGAATACTAAG+AGG | + | chr3_3:3249088-3249107 | None:intergenic | 25.0% |
| ! | TCTTAGTATTCAGCAATATA+AGG | - | chr3_3:3249087-3249106 | Msa0438630:CDS | 25.0% |
| !! | TCAGCAATATAAGGTTTTTA+AGG | - | chr3_3:3249096-3249115 | Msa0438630:CDS | 25.0% |
| !!! | TATCCTTTTTCATTTTATGC+AGG | + | chr3_3:3249502-3249521 | None:intergenic | 25.0% |
| !! | ATTTTCCTTACATATGTCAA+AGG | + | chr3_3:3249581-3249600 | None:intergenic | 25.0% |
| ! | AAAGATTATCATTTGGATGA+GGG | + | chr3_3:3249622-3249641 | None:intergenic | 25.0% |
| ! | TAAAGATTATCATTTGGATG+AGG | + | chr3_3:3249623-3249642 | None:intergenic | 25.0% |
| !! | GTCAAATACATGTTTTACTT+TGG | + | chr3_3:3249680-3249699 | None:intergenic | 25.0% |
| !!! | AAAACATGTATTTGACTTGA+TGG | - | chr3_3:3249684-3249703 | Msa0438630:CDS | 25.0% |
| ! | GAGTTCATAAATACGAAATT+AGG | - | chr3_3:3249810-3249829 | Msa0438630:intron | 25.0% |
| !! | AAATACGAAATTAGGGTTTT+AGG | - | chr3_3:3249818-3249837 | Msa0438630:intron | 25.0% |
| !!! | ATTTTATTTTTGGATGGAAG+AGG | - | chr3_3:3250132-3250151 | Msa0438630:intron | 25.0% |
| !!! | ATTTTCATCCCATTTTAAGT+TGG | - | chr3_3:3250476-3250495 | Msa0438630:intron | 25.0% |
| !!! | CTTTTGAGTATATGAATGTT+TGG | - | chr3_3:3250550-3250569 | Msa0438630:intron | 25.0% |
| ! | AAAAATTGGACACCTTTAAA+AGG | + | chr3_3:3250663-3250682 | None:intergenic | 25.0% |
| ! | AATGTCAAAGATCTAATCTA+AGG | + | chr3_3:3250793-3250812 | None:intergenic | 25.0% |
| !!! | TTTTTTAGGCTCATTATCAT+AGG | - | chr3_3:3250846-3250865 | Msa0438630:intron | 25.0% |
| ! | TAACATGCTATATGAAAACA+AGG | - | chr3_3:3251282-3251301 | Msa0438630:intron | 25.0% |
| !!! | TTCTTGTTTTCTAGTTATTC+TGG | - | chr3_3:3251737-3251756 | Msa0438630:intron | 25.0% |
| !!! | TCTTGTTTTCTAGTTATTCT+GGG | - | chr3_3:3251738-3251757 | Msa0438630:intron | 25.0% |
| !!! | ACCTTGTACTTTTTCATATT+TGG | - | chr3_3:3251959-3251978 | Msa0438630:intron | 25.0% |
| !!! | ACTTTTTCATATTTGGCAAA+AGG | - | chr3_3:3251966-3251985 | Msa0438630:intron | 25.0% |
| ! | ATCTTTGGATTGTTTATGTA+AGG | + | chr3_3:3252689-3252708 | None:intergenic | 25.0% |
| ! | ACATAAACAATCCAAAGATA+AGG | - | chr3_3:3252690-3252709 | Msa0438630:intron | 25.0% |
| !!! | TGATGAGTAATCTATTTCTA+TGG | + | chr3_3:3253015-3253034 | None:intergenic | 25.0% |
| ! | AATGCCACATTATTAAGTAA+AGG | - | chr3_3:3253666-3253685 | Msa0438630:intron | 25.0% |
| !!! | GTTGACATTTTTAAGTTATG+TGG | + | chr3_3:3253692-3253711 | None:intergenic | 25.0% |
| ! | ATATACAGAGATATCGAAAA+GGG | + | chr3_3:3253859-3253878 | None:intergenic | 25.0% |
| ! | AATATACAGAGATATCGAAA+AGG | + | chr3_3:3253860-3253879 | None:intergenic | 25.0% |
| ! | GAATTTAATACAGCAAAAAG+TGG | - | chr3_3:3253914-3253933 | Msa0438630:intron | 25.0% |
| ! | AAAGTTATTGATATCAAACG+AGG | + | chr3_3:3254357-3254376 | None:intergenic | 25.0% |
| !!! | TTATAAACTTTTTGAGAGTG+TGG | + | chr3_3:3254485-3254504 | None:intergenic | 25.0% |
| ! | ACTAGCAATACTTAACATAT+TGG | + | chr3_3:3254528-3254547 | None:intergenic | 25.0% |
| !!! | TTCTCAATAAGTTTTATTCG+AGG | + | chr3_3:3254723-3254742 | None:intergenic | 25.0% |
| ! | TCGAATAAAACTTATTGAGA+AGG | - | chr3_3:3254722-3254741 | Msa0438630:intron | 25.0% |
| !! | TTTAATTCGTTAAGCTTTTG+GGG | - | chr3_3:3254877-3254896 | Msa0438630:intron | 25.0% |
| ! | ACTAGCTGTTGAATAAAATT+AGG | - | chr3_3:3254974-3254993 | Msa0438630:intron | 25.0% |
| ! | CTAGCTGTTGAATAAAATTA+GGG | - | chr3_3:3254975-3254994 | Msa0438630:intron | 25.0% |
| ! | TGTGAAATTTCAATTGGAAA+GGG | + | chr3_3:3255101-3255120 | None:intergenic | 25.0% |
| ! | TTGTGAAATTTCAATTGGAA+AGG | + | chr3_3:3255102-3255121 | None:intergenic | 25.0% |
| ! | AATGGTTAAGGAATCAAAAA+AGG | + | chr3_3:3255131-3255150 | None:intergenic | 25.0% |
| ! | AATATTCATGCATTCAATCA+AGG | - | chr3_3:3255205-3255224 | Msa0438630:CDS | 25.0% |
| ! | ATATTCATGCATTCAATCAA+GGG | - | chr3_3:3255206-3255225 | Msa0438630:CDS | 25.0% |
| ! | TATACTTGAATCCACAAAAA+TGG | + | chr3_3:3255294-3255313 | None:intergenic | 25.0% |
| ! | TACACAAATCATTCATTCAA+AGG | + | chr3_3:3255446-3255465 | None:intergenic | 25.0% |
| ! | ACAATGTGAAACAAACAAAT+AGG | - | chr3_3:3255478-3255497 | Msa0438630:intron | 25.0% |
| !!! | ACATTCTAAAACTTACCTAT+TGG | + | chr3_3:3255676-3255695 | None:intergenic | 25.0% |
| !! | CGTATCTTTTTCTTTAATAG+TGG | - | chr3_3:3255723-3255742 | Msa0438630:intron | 25.0% |
| !!! | TGAATCTATGGAGTTTTAAA+AGG | - | chr3_3:3255823-3255842 | Msa0438630:intron | 25.0% |
| !! | GATCCTCTCAATTTTATATT+CGG | - | chr3_3:3255859-3255878 | Msa0438630:intron | 25.0% |
| ! | TAACCGAATATAAAATTGAG+AGG | + | chr3_3:3255865-3255884 | None:intergenic | 25.0% |
| !!! | CTTATTTTAGAATCTCTCAA+TGG | - | chr3_3:3256371-3256390 | Msa0438630:intron | 25.0% |
| ! | TTTGATATAACATAAACAGC+TGG | + | chr3_3:3256436-3256455 | None:intergenic | 25.0% |
| ! | CAAAATTGCAAAGTATAAAC+TGG | + | chr3_3:3256532-3256551 | None:intergenic | 25.0% |
| !! | CAGTTTATACTTTGCAATTT+TGG | - | chr3_3:3256530-3256549 | Msa0438630:intron | 25.0% |
| ! | TTCAATAACTAATGCTCTAA+AGG | + | chr3_3:3256588-3256607 | None:intergenic | 25.0% |
| !! | CTCCTTAACCAATATATTTT+GGG | - | chr3_3:3256721-3256740 | Msa0438630:intron | 25.0% |
| !! | ATAAAGTGCCCAAAATATAT+TGG | + | chr3_3:3256732-3256751 | None:intergenic | 25.0% |
| !!! | AATATATTTTGGGCACTTTA+TGG | - | chr3_3:3256731-3256750 | Msa0438630:intron | 25.0% |
| ! | ATGAAGAACAAAAATTGAAC+TGG | + | chr3_3:3257132-3257151 | None:intergenic | 25.0% |
| !! | GATACATTATTGATTGTTTG+AGG | - | chr3_3:3257196-3257215 | Msa0438630:intron | 25.0% |
| !!! | TAATTGTTTTCAAAAAGCAC+CGG | + | chr3_3:3257392-3257411 | None:intergenic | 25.0% |
| ! | TTAGAGAAAATAGAAAGACA+TGG | - | chr3_3:3257542-3257561 | Msa0438630:intron | 25.0% |
| ! | TTGAATTACAAACTACACAA+CGG | - | chr3_3:3257576-3257595 | Msa0438630:intron | 25.0% |
| ! | ATCGAAAATAAATAGGAAAG+CGG | + | chr3_3:3257959-3257978 | None:intergenic | 25.0% |
| ! | CGAATTGATCGAAAATAAAT+AGG | + | chr3_3:3257966-3257985 | None:intergenic | 25.0% |
| ! | TTAAAAATGTACCTTATCTG+AGG | - | chr3_3:3258008-3258027 | Msa0438630:CDS | 25.0% |
| !! | TTTTTCGTGTTTATATTGCT+TGG | - | chr3_3:3258096-3258115 | Msa0438630:CDS | 25.0% |
| !! | GAATCAGTTGTTTTGTATTG+CGG | - | chr3_3:3246367-3246386 | Msa0438630:three_prime_UTR | 30.0% |
| ! | ATTGTGAATTTTGTGTGGTT+TGG | - | chr3_3:3246768-3246787 | Msa0438630:intron | 30.0% |
| TTGTAGACTTACATGTTTCT+AGG | - | chr3_3:3246812-3246831 | Msa0438630:intron | 30.0% | |
| ATGCTTAAGATTTGTGTTTG+TGG | - | chr3_3:3247118-3247137 | Msa0438630:intron | 30.0% | |
| TGCTTAAGATTTGTGTTTGT+GGG | - | chr3_3:3247119-3247138 | Msa0438630:intron | 30.0% | |
| ATAAATTATAGACCTGACAG+CGG | + | chr3_3:3247347-3247366 | None:intergenic | 30.0% | |
| ! | GGATGATATGCTTTTAATGA+TGG | - | chr3_3:3247440-3247459 | Msa0438630:intron | 30.0% |
| !! | GAATTATTGGTTCGTCATAA+AGG | + | chr3_3:3247491-3247510 | None:intergenic | 30.0% |
| CACTCAGGAATAAGAATTAT+TGG | + | chr3_3:3247504-3247523 | None:intergenic | 30.0% | |
| AATTGTGAAGATTGAAACTG+TGG | + | chr3_3:3247586-3247605 | None:intergenic | 30.0% | |
| ACAGTTTCAATCTTCACAAT+TGG | - | chr3_3:3247585-3247604 | Msa0438630:intron | 30.0% | |
| TAGTCTACAAACTTAAGATG+TGG | - | chr3_3:3247824-3247843 | Msa0438630:intron | 30.0% | |
| GTTTGATCATTATTCTCCAT+TGG | - | chr3_3:3247923-3247942 | Msa0438630:intron | 30.0% | |
| !!! | AATATAGTGGTTTTAGCCAA+TGG | + | chr3_3:3247942-3247961 | None:intergenic | 30.0% |
| TAGATTCTGTTGTGTAAATC+GGG | + | chr3_3:3248206-3248225 | None:intergenic | 30.0% | |
| CTAGATTCTGTTGTGTAAAT+CGG | + | chr3_3:3248207-3248226 | None:intergenic | 30.0% | |
| TTTACACAACAGAATCTAGT+TGG | - | chr3_3:3248208-3248227 | Msa0438630:intron | 30.0% | |
| AACAGAATCTAGTTGGATAT+TGG | - | chr3_3:3248215-3248234 | Msa0438630:intron | 30.0% | |
| ! | TAGATTTGGTTGATTGAGTA+TGG | - | chr3_3:3248459-3248478 | Msa0438630:intron | 30.0% |
| !! | CTCTATTTAGTTCTACATAG+AGG | - | chr3_3:3248494-3248513 | Msa0438630:intron | 30.0% |
| GGGAATGATGATAAGAAAAT+CGG | + | chr3_3:3248687-3248706 | None:intergenic | 30.0% | |
| AAATCAAGCTTACCTACAAA+AGG | + | chr3_3:3248843-3248862 | None:intergenic | 30.0% | |
| ! | GCTTGATTTGAATTATCTGT+TGG | - | chr3_3:3248854-3248873 | Msa0438630:CDS | 30.0% |
| ! | TTCTTTTAGCAGTGAAAGTT+TGG | - | chr3_3:3248925-3248944 | Msa0438630:intron | 30.0% |
| ! | TAATGATATCCAGTTGACTT+TGG | - | chr3_3:3248977-3248996 | Msa0438630:intron | 30.0% |
| ! | GCAGAATTTTACACATTTCT+TGG | + | chr3_3:3249027-3249046 | None:intergenic | 30.0% |
| AGAAATGTGTAAAATTCTGC+GGG | - | chr3_3:3249027-3249046 | Msa0438630:intron | 30.0% | |
| TTGATTCATTCCGAGATATT+CGG | + | chr3_3:3249260-3249279 | None:intergenic | 30.0% | |
| CAATCTTGTATTTGATCAGT+TGG | + | chr3_3:3249335-3249354 | None:intergenic | 30.0% | |
| GATCCTGCATAAAATGAAAA+AGG | - | chr3_3:3249496-3249515 | Msa0438630:intron | 30.0% | |
| CAAACAACAAAGCATGAATA+AGG | - | chr3_3:3249524-3249543 | Msa0438630:intron | 30.0% | |
| CTTACATATGTCAAAGGATT+GGG | + | chr3_3:3249575-3249594 | None:intergenic | 30.0% | |
| ! | TTTACTTTGGTGCATTTGAT+TGG | + | chr3_3:3249667-3249686 | None:intergenic | 30.0% |
| !! | TGTATTTGACTTGATGGTTA+CGG | - | chr3_3:3249690-3249709 | Msa0438630:CDS | 30.0% |
| CTTCTCATCTACTTAATACA+CGG | - | chr3_3:3249730-3249749 | Msa0438630:CDS | 30.0% | |
| TATACACTACAGTACAGATA+CGG | - | chr3_3:3249869-3249888 | Msa0438630:intron | 30.0% | |
| GTTTGTCCTAATTCTGTTTA+TGG | - | chr3_3:3249960-3249979 | Msa0438630:intron | 30.0% | |
| CAACAAATAACAATGTTGCA+AGG | - | chr3_3:3250021-3250040 | Msa0438630:intron | 30.0% | |
| GAAGAGGAAAAAACAATTGT+TGG | - | chr3_3:3250148-3250167 | Msa0438630:intron | 30.0% | |
| AGGAAAAAACAATTGTTGGT+TGG | - | chr3_3:3250152-3250171 | Msa0438630:intron | 30.0% | |
| ! | GGAAAAAACAATTGTTGGTT+GGG | - | chr3_3:3250153-3250172 | Msa0438630:intron | 30.0% |
| ATATCAAGAGGAAAAAAAGG+CGG | + | chr3_3:3250342-3250361 | None:intergenic | 30.0% | |
| CTTGAGTAGAAAATATCAAG+AGG | + | chr3_3:3250354-3250373 | None:intergenic | 30.0% | |
| !!! | GCATAGAGTTTTGAGAAAAA+TGG | + | chr3_3:3250417-3250436 | None:intergenic | 30.0% |
| GAACTCTTCCAACTTAAAAT+GGG | + | chr3_3:3250487-3250506 | None:intergenic | 30.0% | |
| AGAACTCTTCCAACTTAAAA+TGG | + | chr3_3:3250488-3250507 | None:intergenic | 30.0% | |
| TACTCAAAAGAACAGTTCAA+AGG | + | chr3_3:3250540-3250559 | None:intergenic | 30.0% | |
| ATATGAATGTTTGGTCTATC+AGG | - | chr3_3:3250559-3250578 | Msa0438630:intron | 30.0% | |
| ! | CAAAGATCTAATCTAAGGTT+AGG | + | chr3_3:3250788-3250807 | None:intergenic | 30.0% |
| !!! | TGCCTCTTATCATGTTTTTT+AGG | - | chr3_3:3250832-3250851 | Msa0438630:intron | 30.0% |
| AGCCTAAAAAACATGATAAG+AGG | + | chr3_3:3250837-3250856 | None:intergenic | 30.0% | |
| AGTCTAACTACTTCTCTTAT+AGG | - | chr3_3:3251051-3251070 | Msa0438630:intron | 30.0% | |
| !! | TTTGTTGACTACTTTTGTGT+AGG | - | chr3_3:3251424-3251443 | Msa0438630:intron | 30.0% |
| CTGGGTACATGTTAAATTAA+TGG | - | chr3_3:3251756-3251775 | Msa0438630:intron | 30.0% | |
| TCTCATCAATTCTCATGTTT+AGG | - | chr3_3:3251858-3251877 | Msa0438630:intron | 30.0% | |
| ! | GAAAAAGTACAAGGTAAACA+AGG | + | chr3_3:3251954-3251973 | None:intergenic | 30.0% |
| ! | GCCAAATATGAAAAAGTACA+AGG | + | chr3_3:3251963-3251982 | None:intergenic | 30.0% |
| !! | CCTTTTGAAAAATGGTTCAA+TGG | + | chr3_3:3252158-3252177 | None:intergenic | 30.0% |
| !! | CCATTGAACCATTTTTCAAA+AGG | - | chr3_3:3252155-3252174 | Msa0438630:intron | 30.0% |
| ATAATATACACAACTCTTCC+AGG | + | chr3_3:3252298-3252317 | None:intergenic | 30.0% | |
| TATGATAGAAGTAGAAGTTC+AGG | - | chr3_3:3252315-3252334 | Msa0438630:CDS | 30.0% | |
| CATTGAACAAGTGTTAGAAA+GGG | + | chr3_3:3252380-3252399 | None:intergenic | 30.0% | |
| TCATTGAACAAGTGTTAGAA+AGG | + | chr3_3:3252381-3252400 | None:intergenic | 30.0% | |
| AAAGTTTATTTGCTCATACC+CGG | - | chr3_3:3252405-3252424 | Msa0438630:intron | 30.0% | |
| TAGCTTCATATTTCAGAGAA+TGG | + | chr3_3:3252469-3252488 | None:intergenic | 30.0% | |
| ! | GAATGTCTAAATCTGTTTCT+TGG | - | chr3_3:3252489-3252508 | Msa0438630:CDS | 30.0% |
| ACATACATCATATTCTACAG+CGG | + | chr3_3:3252574-3252593 | None:intergenic | 30.0% | |
| ACACTTCTATATTGCTATGA+GGG | + | chr3_3:3252599-3252618 | None:intergenic | 30.0% | |
| ! | CTAAGTACTCTATTTTGTCA+AGG | + | chr3_3:3252639-3252658 | None:intergenic | 30.0% |
| TAAACAATCCAAAGATAAGG+TGG | - | chr3_3:3252693-3252712 | Msa0438630:intron | 30.0% | |
| TTTAGTCATGGTGAAATTGT+CGG | - | chr3_3:3252931-3252950 | Msa0438630:CDS | 30.0% | |
| AATCAATGCAATTTAGAAGC+AGG | - | chr3_3:3253077-3253096 | Msa0438630:intron | 30.0% | |
| !! | CTAGTAGTTTATAGGTTGAT+GGG | + | chr3_3:3253250-3253269 | None:intergenic | 30.0% |
| ! | ACTAGTAGTTTATAGGTTGA+TGG | + | chr3_3:3253251-3253270 | None:intergenic | 30.0% |
| GTTTCAATTTCTGTCATTCT+AGG | - | chr3_3:3253552-3253571 | Msa0438630:intron | 30.0% | |
| ATTCTATGAAGGACTAAAAG+TGG | - | chr3_3:3253758-3253777 | Msa0438630:intron | 30.0% | |
| TTCTATGAAGGACTAAAAGT+GGG | - | chr3_3:3253759-3253778 | Msa0438630:intron | 30.0% | |
| !!! | AAAAAGTGGACTAGTGTTTT+GGG | - | chr3_3:3253928-3253947 | Msa0438630:intron | 30.0% |
| GTTAAGATTTAATATCGCTC+CGG | - | chr3_3:3254003-3254022 | Msa0438630:intron | 30.0% | |
| AGTTGCATTTCCTTGTAATA+GGG | - | chr3_3:3254306-3254325 | Msa0438630:intron | 30.0% | |
| AATACTTAACATATTGGCAC+TGG | + | chr3_3:3254522-3254541 | None:intergenic | 30.0% | |
| !! | ATTCTGAAATTAATCCATGC+AGG | - | chr3_3:3254617-3254636 | Msa0438630:intron | 30.0% |
| ! | TTCTTCTTTGGAAAGAATCA+TGG | - | chr3_3:3254649-3254668 | Msa0438630:intron | 30.0% |
| ! | TCTTCTTTGGAAAGAATCAT+GGG | - | chr3_3:3254650-3254669 | Msa0438630:intron | 30.0% |
| ! | GGTTTCTGCAAAAAGATTTT+GGG | + | chr3_3:3254748-3254767 | None:intergenic | 30.0% |
| ! | TGGTTTCTGCAAAAAGATTT+TGG | + | chr3_3:3254749-3254768 | None:intergenic | 30.0% |
| ! | AAATCTTTTTGCAGAAACCA+AGG | - | chr3_3:3254749-3254768 | Msa0438630:intron | 30.0% |
| GCATGAATATTTAGTCAACA+AGG | + | chr3_3:3255196-3255215 | None:intergenic | 30.0% | |
| ! | GTGAAAACAGAATTTAAGGT+TGG | - | chr3_3:3255368-3255387 | Msa0438630:CDS | 30.0% |
| ! | TGAACTGATTTATACAGAAG+CGG | + | chr3_3:3255524-3255543 | None:intergenic | 30.0% |
| ! | CTCCTTCGAAAATTTTTCTA+GGG | + | chr3_3:3255644-3255663 | None:intergenic | 30.0% |
| ! | TCTCCTTCGAAAATTTTTCT+AGG | + | chr3_3:3255645-3255664 | None:intergenic | 30.0% |
| !! | TTCTAAAACTTACCTATTGG+AGG | + | chr3_3:3255673-3255692 | None:intergenic | 30.0% |
| ! | ACTAGACTAACCATCTTTTT+AGG | - | chr3_3:3255893-3255912 | Msa0438630:intron | 30.0% |
| AAAGCTCATAAACTCAAGAA+AGG | - | chr3_3:3256213-3256232 | Msa0438630:intron | 30.0% | |
| ! | TTTGCAATTTTGGATACCTA+TGG | - | chr3_3:3256540-3256559 | Msa0438630:intron | 30.0% |
| ! | GCTCCTTAACCAATATATTT+TGG | - | chr3_3:3256720-3256739 | Msa0438630:intron | 30.0% |
| ! | TGCCCAAAATATATTGGTTA+AGG | + | chr3_3:3256726-3256745 | None:intergenic | 30.0% |
| CGTCTCTTTCATAATTCATA+GGG | + | chr3_3:3256762-3256781 | None:intergenic | 30.0% | |
| TCATGATGAACATTACAAGA+GGG | + | chr3_3:3256804-3256823 | None:intergenic | 30.0% | |
| TTCATGATGAACATTACAAG+AGG | + | chr3_3:3256805-3256824 | None:intergenic | 30.0% | |
| TAATGTTCATCATGAAGTAG+TGG | - | chr3_3:3256809-3256828 | Msa0438630:CDS | 30.0% | |
| TTCATGTTATTAGTTGAACC+AGG | - | chr3_3:3257167-3257186 | Msa0438630:intron | 30.0% | |
| TCATGTTATTAGTTGAACCA+GGG | - | chr3_3:3257168-3257187 | Msa0438630:intron | 30.0% | |
| ! | TCATTTTAGACGAAAAAGTG+AGG | + | chr3_3:3257277-3257296 | None:intergenic | 30.0% |
| !! | CATATTGTAGGCTTTATTTC+TGG | + | chr3_3:3257334-3257353 | None:intergenic | 30.0% |
| !!! | AATTGTTTTCAAAAAGCACC+GGG | + | chr3_3:3257391-3257410 | None:intergenic | 30.0% |
| ! | CTCTAATTTGTGCTACAAAT+TGG | + | chr3_3:3257487-3257506 | None:intergenic | 30.0% |
| AAGAGGGGGATAAAAAAAAA+GGG | + | chr3_3:3258054-3258073 | None:intergenic | 30.0% | |
| TAAGAGGGGGATAAAAAAAA+AGG | + | chr3_3:3258055-3258074 | None:intergenic | 30.0% | |
| AAATGGCGTCGTTTGTATAA+CGG | - | chr3_3:3246340-3246359 | Msa0438630:three_prime_UTR | 35.0% | |
| !! | GGATTTTAAAAACCCTAACG+CGG | - | chr3_3:3246388-3246407 | Msa0438630:three_prime_UTR | 35.0% |
| !! | ACATGTTTCTAGGATCTTGT+AGG | - | chr3_3:3246822-3246841 | Msa0438630:intron | 35.0% |
| TAAAACACCAACACAACATG+TGG | + | chr3_3:3247013-3247032 | None:intergenic | 35.0% | |
| !! | CTTATGTAGCATTGACACTT+AGG | + | chr3_3:3247038-3247057 | None:intergenic | 35.0% |
| GCTTAAGATTTGTGTTTGTG+GGG | - | chr3_3:3247120-3247139 | Msa0438630:intron | 35.0% | |
| CATGTGTAAGTGGCAAAAAA+GGG | - | chr3_3:3247254-3247273 | Msa0438630:intron | 35.0% | |
| !! | TATTGGTTCGTCATAAAGGT+AGG | + | chr3_3:3247487-3247506 | None:intergenic | 35.0% |
| GATATTGTCCAATGCTAGTA+TGG | - | chr3_3:3247536-3247555 | Msa0438630:intron | 35.0% | |
| CAGAAATTCCATACTAGCAT+TGG | + | chr3_3:3247547-3247566 | None:intergenic | 35.0% | |
| CTAGTATGGAATTTCTGCAA+CGG | - | chr3_3:3247550-3247569 | Msa0438630:intron | 35.0% | |
| TAGTATGGAATTTCTGCAAC+GGG | - | chr3_3:3247551-3247570 | Msa0438630:intron | 35.0% | |
| !! | ACGCGTTAGATCATTTTGAT+AGG | - | chr3_3:3247637-3247656 | Msa0438630:intron | 35.0% |
| TCATGCATTAGTAAGAGAAC+AGG | + | chr3_3:3247689-3247708 | None:intergenic | 35.0% | |
| ! | CAGTAATTCATTTGTTGGCA+AGG | + | chr3_3:3247780-3247799 | None:intergenic | 35.0% |
| ACAAACTTAAGATGTGGAGT+AGG | - | chr3_3:3247830-3247849 | Msa0438630:intron | 35.0% | |
| CAAACTTAAGATGTGGAGTA+GGG | - | chr3_3:3247831-3247850 | Msa0438630:intron | 35.0% | |
| ! | GGAAATACTGCATAGTTTGT+GGG | - | chr3_3:3247852-3247871 | Msa0438630:intron | 35.0% |
| TACATAGAGGAAAACGATGA+AGG | - | chr3_3:3248507-3248526 | Msa0438630:intron | 35.0% | |
| ! | TTTTCTTATCATCATTCCCC+AGG | - | chr3_3:3248688-3248707 | Msa0438630:intron | 35.0% |
| ! | TCTCAAATTTTCATCTGCCT+GGG | + | chr3_3:3248708-3248727 | None:intergenic | 35.0% |
| ! | ATCTCAAATTTTCATCTGCC+TGG | + | chr3_3:3248709-3248728 | None:intergenic | 35.0% |
| ! | TGTTTTCTGATATTCGCTCT+CGG | - | chr3_3:3248954-3248973 | Msa0438630:intron | 35.0% |
| AAAAAAAGGCAGAAAAGTCC+AGG | + | chr3_3:3249418-3249437 | None:intergenic | 35.0% | |
| CCTTACATATGTCAAAGGAT+TGG | + | chr3_3:3249576-3249595 | None:intergenic | 35.0% | |
| CCAATCCTTTGACATATGTA+AGG | - | chr3_3:3249573-3249592 | Msa0438630:intron | 35.0% | |
| ACAATGTTGCAAGGTTGTAA+TGG | - | chr3_3:3250030-3250049 | Msa0438630:intron | 35.0% | |
| CAATGTTGCAAGGTTGTAAT+GGG | - | chr3_3:3250031-3250050 | Msa0438630:intron | 35.0% | |
| ! | GGTTGTAATGGGAAAATATG+AGG | - | chr3_3:3250042-3250061 | Msa0438630:intron | 35.0% |
| GGGAAAATATGAGGTGAATT+AGG | - | chr3_3:3250051-3250070 | Msa0438630:intron | 35.0% | |
| ACAAAGGTAACAGCAGTTAA+AGG | - | chr3_3:3250184-3250203 | Msa0438630:intron | 35.0% | |
| TAACAGCAGTTAAAGGATCA+AGG | - | chr3_3:3250191-3250210 | Msa0438630:intron | 35.0% | |
| AATGGAAGAAGCAATGAATG+AGG | + | chr3_3:3250399-3250418 | None:intergenic | 35.0% | |
| TCAAAAGAACAGTTCAAAGG+TGG | + | chr3_3:3250537-3250556 | None:intergenic | 35.0% | |
| GTTTCATATGCCAATACTTC+TGG | - | chr3_3:3250612-3250631 | Msa0438630:intron | 35.0% | |
| ! | ACATGTCAGACACCTTTTAA+AGG | - | chr3_3:3250648-3250667 | Msa0438630:intron | 35.0% |
| ! | TCTTAGTACACCTTTTTGTC+AGG | - | chr3_3:3251100-3251119 | Msa0438630:intron | 35.0% |
| ! | CTTAGTACACCTTTTTGTCA+GGG | - | chr3_3:3251101-3251120 | Msa0438630:intron | 35.0% |
| TCTAGATTACCCTGACAAAA+AGG | + | chr3_3:3251113-3251132 | None:intergenic | 35.0% | |
| ! | AATCTCTAGAAGAGTAGCAT+CGG | + | chr3_3:3251504-3251523 | None:intergenic | 35.0% |
| TCTAGAGATTCTGCTTGATA+AGG | - | chr3_3:3251514-3251533 | Msa0438630:intron | 35.0% | |
| ATTGTAACAGAGCATGAAGA+GGG | + | chr3_3:3251549-3251568 | None:intergenic | 35.0% | |
| ! | TCTCAGTTAAAAGTGTGCAA+AGG | - | chr3_3:3251611-3251630 | Msa0438630:intron | 35.0% |
| ATTCCACCTGTTTAGATGAA+CGG | + | chr3_3:3251718-3251737 | None:intergenic | 35.0% | |
| TGTCAGGTTTGTGATGTATA+TGG | - | chr3_3:3252005-3252024 | Msa0438630:intron | 35.0% | |
| ! | TTCTTGTTATGATGATGCAG+AGG | - | chr3_3:3252054-3252073 | Msa0438630:intron | 35.0% |
| !! | CTGTCTTGCCTTTTGAAAAA+TGG | + | chr3_3:3252166-3252185 | None:intergenic | 35.0% |
| !! | CATTTTTCAAAAGGCAAGAC+AGG | - | chr3_3:3252164-3252183 | Msa0438630:intron | 35.0% |
| ACCATAACTTATGTCATTCC+GGG | + | chr3_3:3252426-3252445 | None:intergenic | 35.0% | |
| GACCATAACTTATGTCATTC+CGG | + | chr3_3:3252427-3252446 | None:intergenic | 35.0% | |
| TGACATAAGTTATGGTCCAA+AGG | - | chr3_3:3252430-3252449 | Msa0438630:intron | 35.0% | |
| GACACTTCTATATTGCTATG+AGG | + | chr3_3:3252600-3252619 | None:intergenic | 35.0% | |
| ATACCTATTACTGGATGTGA+TGG | - | chr3_3:3252826-3252845 | Msa0438630:intron | 35.0% | |
| GTTTGATATTCTTTGGCAGA+AGG | - | chr3_3:3252861-3252880 | Msa0438630:intron | 35.0% | |
| AAACAAATTGCAGACATTGC+AGG | - | chr3_3:3252884-3252903 | Msa0438630:intron | 35.0% | |
| ACTGGATGGTTATTTAGTCA+TGG | - | chr3_3:3252919-3252938 | Msa0438630:CDS | 35.0% | |
| CTATTTCAAGAATGTTCAGG+AGG | + | chr3_3:3252972-3252991 | None:intergenic | 35.0% | |
| ! | CAGCTATTTCAAGAATGTTC+AGG | + | chr3_3:3252975-3252994 | None:intergenic | 35.0% |
| CTGAACATTCTTGAAATAGC+TGG | - | chr3_3:3252973-3252992 | Msa0438630:CDS | 35.0% | |
| TTGGGAAATAGAGAGTAGTA+GGG | - | chr3_3:3253142-3253161 | Msa0438630:intron | 35.0% | |
| !! | TATGAAGTGTTGCTAGAAAG+TGG | + | chr3_3:3253286-3253305 | None:intergenic | 35.0% |
| ATGAAGTGTATGATGCAACA+CGG | - | chr3_3:3253305-3253324 | Msa0438630:intron | 35.0% | |
| TATGTTGGAATCATGGGTTT+AGG | - | chr3_3:3253363-3253382 | Msa0438630:intron | 35.0% | |
| TTAAATCGAGAGAGGAAGAT+AGG | + | chr3_3:3253442-3253461 | None:intergenic | 35.0% | |
| TCTTCCTCTCTCGATTTAAT+TGG | - | chr3_3:3253443-3253462 | Msa0438630:intron | 35.0% | |
| ATCACCAATTAAATCGAGAG+AGG | + | chr3_3:3253450-3253469 | None:intergenic | 35.0% | |
| TCTTGAGGAAATTGTTTCCA+TGG | - | chr3_3:3253517-3253536 | Msa0438630:intron | 35.0% | |
| GTGGCCTTTACTTAATAATG+TGG | + | chr3_3:3253673-3253692 | None:intergenic | 35.0% | |
| TGGGAGAATCTTAAATGACA+GGG | - | chr3_3:3253778-3253797 | Msa0438630:intron | 35.0% | |
| !!! | CAAAAAGTGGACTAGTGTTT+TGG | - | chr3_3:3253927-3253946 | Msa0438630:intron | 35.0% |
| TAGAGATGAGTGAAATGCAA+TGG | - | chr3_3:3253981-3254000 | Msa0438630:intron | 35.0% | |
| ATGGACAGAGATTCATAAAC+CGG | + | chr3_3:3254025-3254044 | None:intergenic | 35.0% | |
| AAGGACTTCTTCTTATCAAC+AGG | - | chr3_3:3254192-3254211 | Msa0438630:intron | 35.0% | |
| AGGACTTCTTCTTATCAACA+GGG | - | chr3_3:3254193-3254212 | Msa0438630:intron | 35.0% | |
| CAGTTGCATTTCCTTGTAAT+AGG | - | chr3_3:3254305-3254324 | Msa0438630:intron | 35.0% | |
| !!! | TTATGCCTTCTTTTTTTGCG+CGG | - | chr3_3:3254440-3254459 | Msa0438630:intron | 35.0% |
| !! | CATGCTTTCCATTTTAGTAC+TGG | - | chr3_3:3254581-3254600 | Msa0438630:intron | 35.0% |
| CCTAACTTCCAGTACTAAAA+TGG | + | chr3_3:3254592-3254611 | None:intergenic | 35.0% | |
| !! | CCATTTTAGTACTGGAAGTT+AGG | - | chr3_3:3254589-3254608 | Msa0438630:intron | 35.0% |
| AAATTAATCCATGCAGGATG+TGG | - | chr3_3:3254623-3254642 | Msa0438630:intron | 35.0% | |
| GGAACTTGAAAAAAATCCCA+TGG | - | chr3_3:3254671-3254690 | Msa0438630:intron | 35.0% | |
| ! | TGATTCAAAGGTATGTTCCT+TGG | + | chr3_3:3254769-3254788 | None:intergenic | 35.0% |
| GGAACATACCTTTGAATCAA+AGG | - | chr3_3:3254770-3254789 | Msa0438630:intron | 35.0% | |
| !! | AGGAGCATGCAAAACTTTTA+AGG | - | chr3_3:3254799-3254818 | Msa0438630:intron | 35.0% |
| !!! | TCAGTTTTTTGTTACACTGC+TGG | - | chr3_3:3254830-3254849 | Msa0438630:intron | 35.0% |
| TTTCTTATCAAGTGCCCTTA+GGG | + | chr3_3:3255016-3255035 | None:intergenic | 35.0% | |
| CAAGTATAAGTGACACAATC+CGG | - | chr3_3:3255306-3255325 | Msa0438630:intron | 35.0% | |
| TGGTACTTGAACCTTGATTA+TGG | - | chr3_3:3255388-3255407 | Msa0438630:CDS | 35.0% | |
| CCTTCAAAGAACCATAATCA+AGG | + | chr3_3:3255402-3255421 | None:intergenic | 35.0% | |
| CCTTGATTATGGTTCTTTGA+AGG | - | chr3_3:3255399-3255418 | Msa0438630:CDS | 35.0% | |
| TGATTTATACAGAAGCGGTA+GGG | + | chr3_3:3255519-3255538 | None:intergenic | 35.0% | |
| ! | TTCATGAGCTCAGAATTTTG+TGG | - | chr3_3:3255540-3255559 | Msa0438630:intron | 35.0% |
| !!! | TTTTGTGGTTCTAACACTAC+AGG | - | chr3_3:3255555-3255574 | Msa0438630:intron | 35.0% |
| ! | TGCCCTAGAAAAATTTTCGA+AGG | - | chr3_3:3255639-3255658 | Msa0438630:CDS | 35.0% |
| !! | AGACTAACCATCTTTTTAGG+TGG | - | chr3_3:3255896-3255915 | Msa0438630:intron | 35.0% |
| TAGAAAGCCACCTAAAAAGA+TGG | + | chr3_3:3255906-3255925 | None:intergenic | 35.0% | |
| !! | CTCTCAATGGCTTTGTATAT+TGG | - | chr3_3:3256384-3256403 | Msa0438630:intron | 35.0% |
| TTAGCATTCTCATCTTCCAT+AGG | + | chr3_3:3256559-3256578 | None:intergenic | 35.0% | |
| TATGGAAGATGAGAATGCTA+AGG | - | chr3_3:3256558-3256577 | Msa0438630:intron | 35.0% | |
| GCGTCTCTTTCATAATTCAT+AGG | + | chr3_3:3256763-3256782 | None:intergenic | 35.0% | |
| ! | CGAACAATACCTATGTGTTT+TGG | - | chr3_3:3256874-3256893 | Msa0438630:CDS | 35.0% |
| ! | TTTTGGCATCCATAGGTTAT+AGG | - | chr3_3:3256891-3256910 | Msa0438630:CDS | 35.0% |
| ATGCATTGAAGCAGATGAAA+AGG | - | chr3_3:3256928-3256947 | Msa0438630:CDS | 35.0% | |
| TGCATTGAAGCAGATGAAAA+GGG | - | chr3_3:3256929-3256948 | Msa0438630:CDS | 35.0% | |
| ! | GCTACTCTGATATTGGTTAT+CGG | + | chr3_3:3257110-3257129 | None:intergenic | 35.0% |
| CATGTTATTAGTTGAACCAG+GGG | - | chr3_3:3257169-3257188 | Msa0438630:intron | 35.0% | |
| ! | CAATAATGTATCTTTTCCCC+TGG | + | chr3_3:3257188-3257207 | None:intergenic | 35.0% |
| ACAATCTCAACCATTGATCA+TGG | - | chr3_3:3257243-3257262 | Msa0438630:intron | 35.0% | |
| CTACAATATGTGCTGAACTT+GGG | - | chr3_3:3257344-3257363 | Msa0438630:intron | 35.0% | |
| ATATTGCTGAAACTACAACC+CGG | - | chr3_3:3257370-3257389 | Msa0438630:intron | 35.0% | |
| ! | ACAAATTAGAGCTTTTGCTG+TGG | - | chr3_3:3257496-3257515 | Msa0438630:intron | 35.0% |
| ! | TACCTTATCTGAGGTTAATG+TGG | - | chr3_3:3258017-3258036 | Msa0438630:CDS | 35.0% |
| TACCACATTAACCTCAGATA+AGG | + | chr3_3:3258022-3258041 | None:intergenic | 35.0% | |
| AGAGGGGGATAAAAAAAAAG+GGG | + | chr3_3:3258053-3258072 | None:intergenic | 35.0% | |
| TCTCTTTGATCATGTAAGAG+GGG | + | chr3_3:3258069-3258088 | None:intergenic | 35.0% | |
| GTCTCTTTGATCATGTAAGA+GGG | + | chr3_3:3258070-3258089 | None:intergenic | 35.0% | |
| TGTCTCTTTGATCATGTAAG+AGG | + | chr3_3:3258071-3258090 | None:intergenic | 35.0% | |
| !! | ATGTTGCTGATTGTGCGTTT+TGG | - | chr3_3:3246315-3246334 | Msa0438630:three_prime_UTR | 40.0% |
| !! | TGTTGCTGATTGTGCGTTTT+GGG | - | chr3_3:3246316-3246335 | Msa0438630:three_prime_UTR | 40.0% |
| ! | GGGAATGTTGAGGTTTTACT+TGG | - | chr3_3:3246485-3246504 | Msa0438630:three_prime_UTR | 40.0% |
| !! | TGTTGAGGTTTTACTTGGTG+TGG | - | chr3_3:3246490-3246509 | Msa0438630:three_prime_UTR | 40.0% |
| !!! | GTTGAGGTTTTACTTGGTGT+GGG | - | chr3_3:3246491-3246510 | Msa0438630:three_prime_UTR | 40.0% |
| CTTGCGTCATTTACTCATGA+TGG | - | chr3_3:3246638-3246657 | Msa0438630:CDS | 40.0% | |
| AATTCTGTTGGGAATTGGAC+TGG | - | chr3_3:3246726-3246745 | Msa0438630:intron | 40.0% | |
| !!! | CCTTTTTTGCCACTTACACA+TGG | + | chr3_3:3247256-3247275 | None:intergenic | 40.0% |
| CCATGTGTAAGTGGCAAAAA+AGG | - | chr3_3:3247253-3247272 | Msa0438630:intron | 40.0% | |
| TCGTCATAAAGGTAGGTAAC+CGG | + | chr3_3:3247480-3247499 | None:intergenic | 40.0% | |
| ATTCTTATTCCTGAGTGCGA+TGG | - | chr3_3:3247507-3247526 | Msa0438630:CDS | 40.0% | |
| AAGATTGAAACTGTGGAGTC+AGG | + | chr3_3:3247579-3247598 | None:intergenic | 40.0% | |
| ! | TTTTGATAGGCGTAGTGCTA+AGG | - | chr3_3:3247650-3247669 | Msa0438630:intron | 40.0% |
| GGGAAATACTGCATAGTTTG+TGG | - | chr3_3:3247851-3247870 | Msa0438630:intron | 40.0% | |
| ! | ATAGTTTGTGGGCATGTGTT+TGG | - | chr3_3:3247863-3247882 | Msa0438630:intron | 40.0% |
| ACAGCACAAGCTATTGAATG+AGG | + | chr3_3:3248070-3248089 | None:intergenic | 40.0% | |
| ! | AACTGATAGCGTACTTACCA+AGG | - | chr3_3:3248114-3248133 | Msa0438630:intron | 40.0% |
| CTCAAACATGTCTTACTGAG+CGG | - | chr3_3:3248332-3248351 | Msa0438630:intron | 40.0% | |
| TCAGTAGAAAGCAATGCTCA+AGG | + | chr3_3:3248364-3248383 | None:intergenic | 40.0% | |
| ATGGTTACGACTCCCAATAA+TGG | - | chr3_3:3248426-3248445 | Msa0438630:intron | 40.0% | |
| ! | CTCAAATTTTCATCTGCCTG+GGG | + | chr3_3:3248707-3248726 | None:intergenic | 40.0% |
| AAATTGCTGCCAAAGTCAAC+TGG | + | chr3_3:3248989-3249008 | None:intergenic | 40.0% | |
| ! | TAGTGCTGAAATTGTCTGTG+CGG | - | chr3_3:3249133-3249152 | Msa0438630:CDS | 40.0% |
| AGATGGTGTAAGCAACTGAT+AGG | + | chr3_3:3249182-3249201 | None:intergenic | 40.0% | |
| ! | GATGTTGGTGAGCATTTATC+AGG | + | chr3_3:3249219-3249238 | None:intergenic | 40.0% |
| TTGCGGATATCCGAATATCT+CGG | - | chr3_3:3249247-3249266 | Msa0438630:intron | 40.0% | |
| ! | GCAAATATTTCTGCTCGTGA+GGG | + | chr3_3:3249381-3249400 | None:intergenic | 40.0% |
| ! | TGCAAATATTTCTGCTCGTG+AGG | + | chr3_3:3249382-3249401 | None:intergenic | 40.0% |
| TGATGGTTACGGACGTATAA+TGG | - | chr3_3:3249701-3249720 | Msa0438630:CDS | 40.0% | |
| TGGTTGGGAGACAATTACAA+AGG | - | chr3_3:3250168-3250187 | Msa0438630:intron | 40.0% | |
| AGCAGTTAAAGGATCAAGGA+CGG | - | chr3_3:3250195-3250214 | Msa0438630:intron | 40.0% | |
| !! | ACGAAAGTGTCGTTAGAGAA+GGG | - | chr3_3:3250256-3250275 | Msa0438630:CDS | 40.0% |
| ACTGAAGAACATGGCTAAAG+TGG | - | chr3_3:3250286-3250305 | Msa0438630:intron | 40.0% | |
| CTGAAGAACATGGCTAAAGT+GGG | - | chr3_3:3250287-3250306 | Msa0438630:intron | 40.0% | |
| GAAGAAGCAATGAATGAGGA+GGG | + | chr3_3:3250395-3250414 | None:intergenic | 40.0% | |
| ! | TGGAAGAGTTCTGACATACT+TGG | - | chr3_3:3250496-3250515 | Msa0438630:intron | 40.0% |
| ! | AAGAGTTCTGACATACTTGG+TGG | - | chr3_3:3250499-3250518 | Msa0438630:intron | 40.0% |
| AAAGAACAGTTCAAAGGTGG+TGG | + | chr3_3:3250534-3250553 | None:intergenic | 40.0% | |
| ATTGGCATATGAAACGTGTC+AGG | + | chr3_3:3250607-3250626 | None:intergenic | 40.0% | |
| ! | CAAGGTGTTTCCAGAAGTAT+TGG | + | chr3_3:3250625-3250644 | None:intergenic | 40.0% |
| !! | AGGAATGTCCAAGAAGTGTT+TGG | + | chr3_3:3250768-3250787 | None:intergenic | 40.0% |
| AAAAATCTGGATGTGGTGTC+TGG | - | chr3_3:3251230-3251249 | Msa0438630:intron | 40.0% | |
| ! | TGTCTGGATGTCCATTTTGT+TGG | - | chr3_3:3251246-3251265 | Msa0438630:intron | 40.0% |
| !! | GTTGACTACTTTTGTGTAGG+AGG | - | chr3_3:3251427-3251446 | Msa0438630:intron | 40.0% |
| TGCTAAGATAACTGCGTCAT+TGG | - | chr3_3:3251472-3251491 | Msa0438630:intron | 40.0% | |
| ! | ATCTCTAGAAGAGTAGCATC+GGG | + | chr3_3:3251503-3251522 | None:intergenic | 40.0% |
| TTGTAACAGAGCATGAAGAG+GGG | + | chr3_3:3251548-3251567 | None:intergenic | 40.0% | |
| GATTGTAACAGAGCATGAAG+AGG | + | chr3_3:3251550-3251569 | None:intergenic | 40.0% | |
| TTCCACCTGTTTAGATGAAC+GGG | + | chr3_3:3251717-3251736 | None:intergenic | 40.0% | |
| ATCGAATTGGGTGTGACTTA+GGG | + | chr3_3:3251806-3251825 | None:intergenic | 40.0% | |
| CTTCTTCTCCTATGCTTAAC+AGG | + | chr3_3:3251891-3251910 | None:intergenic | 40.0% | |
| AGAAGATACAGCCTTGATGA+AGG | - | chr3_3:3251906-3251925 | Msa0438630:intron | 40.0% | |
| ATGGTTCCAAAGAACTCCAA+CGG | + | chr3_3:3252083-3252102 | None:intergenic | 40.0% | |
| ! | TTTTCAAAAGGCAAGACAGG+TGG | - | chr3_3:3252167-3252186 | Msa0438630:intron | 40.0% |
| ! | TTTTCGACCAAATCATTGCC+TGG | - | chr3_3:3252277-3252296 | Msa0438630:intron | 40.0% |
| AACTCTTCCAGGCAATGATT+TGG | + | chr3_3:3252287-3252306 | None:intergenic | 40.0% | |
| ACCCGGAATGACATAAGTTA+TGG | - | chr3_3:3252422-3252441 | Msa0438630:intron | 40.0% | |
| ACACTTTGACTATGGCAAAG+GGG | + | chr3_3:3252542-3252561 | None:intergenic | 40.0% | |
| CACACTTTGACTATGGCAAA+GGG | + | chr3_3:3252543-3252562 | None:intergenic | 40.0% | |
| GCAAATGCACACTTTGACTA+TGG | + | chr3_3:3252550-3252569 | None:intergenic | 40.0% | |
| GACATGATCCACCTTATCTT+TGG | + | chr3_3:3252704-3252723 | None:intergenic | 40.0% | |
| TGAGATAACAATGCTGTTGC+TGG | - | chr3_3:3252748-3252767 | Msa0438630:CDS | 40.0% | |
| GAGATAACAATGCTGTTGCT+GGG | - | chr3_3:3252749-3252768 | Msa0438630:CDS | 40.0% | |
| AGATAACAATGCTGTTGCTG+GGG | - | chr3_3:3252750-3252769 | Msa0438630:CDS | 40.0% | |
| ATGACTGCAGTATAGTAAGC+TGG | + | chr3_3:3252808-3252827 | None:intergenic | 40.0% | |
| ACTGCAGTCATACCTATTAC+TGG | - | chr3_3:3252817-3252836 | Msa0438630:intron | 40.0% | |
| TCACCATCACATCCAGTAAT+AGG | + | chr3_3:3252832-3252851 | None:intergenic | 40.0% | |
| TCAAGAATGTTCAGGAGGTA+TGG | + | chr3_3:3252967-3252986 | None:intergenic | 40.0% | |
| !! | CTATTTCTATGGAGACAAGC+AGG | + | chr3_3:3253004-3253023 | None:intergenic | 40.0% |
| GTTGGGAAATAGAGAGTAGT+AGG | - | chr3_3:3253141-3253160 | Msa0438630:intron | 40.0% | |
| TGGGAAATAGAGAGTAGTAG+GGG | - | chr3_3:3253143-3253162 | Msa0438630:intron | 40.0% | |
| TGAAGTGTATGATGCAACAC+GGG | - | chr3_3:3253306-3253325 | Msa0438630:intron | 40.0% | |
| ! | CATGGGTTTAGGATTTCTTG+AGG | - | chr3_3:3253374-3253393 | Msa0438630:intron | 40.0% |
| ! | GGTTTAGGATTTCTTGAGGT+GGG | - | chr3_3:3253378-3253397 | Msa0438630:intron | 40.0% |
| CAATTAACAGCGCACATATG+AGG | + | chr3_3:3253419-3253438 | None:intergenic | 40.0% | |
| TTAAGTATGTGCGCATCTTG+AGG | - | chr3_3:3253502-3253521 | Msa0438630:intron | 40.0% | |
| ! | GTTTCCATGGAGTTTCAAGT+TGG | - | chr3_3:3253530-3253549 | Msa0438630:intron | 40.0% |
| GAAACCAACTTGAAACTCCA+TGG | + | chr3_3:3253537-3253556 | None:intergenic | 40.0% | |
| GTGGGAGAATCTTAAATGAC+AGG | - | chr3_3:3253777-3253796 | Msa0438630:intron | 40.0% | |
| AACCAGAATGCTCTCATTAC+AGG | - | chr3_3:3253815-3253834 | Msa0438630:intron | 40.0% | |
| ACCAGAATGCTCTCATTACA+GGG | - | chr3_3:3253816-3253835 | Msa0438630:intron | 40.0% | |
| !!! | TCTGTCCATGTTTTCTAGCT+TGG | - | chr3_3:3254036-3254055 | Msa0438630:intron | 40.0% |
| TCTGTCCAAGCTAGAAAACA+TGG | + | chr3_3:3254044-3254063 | None:intergenic | 40.0% | |
| GCATTTCCTTGTAATAGGGA+TGG | - | chr3_3:3254310-3254329 | Msa0438630:intron | 40.0% | |
| GTGAAACCATCCCTATTACA+AGG | + | chr3_3:3254319-3254338 | None:intergenic | 40.0% | |
| AGGATGTGGCATTTCTTCTT+TGG | - | chr3_3:3254637-3254656 | Msa0438630:intron | 40.0% | |
| AAAAAATCCCATGGCAAGCA+AGG | - | chr3_3:3254680-3254699 | Msa0438630:intron | 40.0% | |
| AAAAATCCCATGGCAAGCAA+GGG | - | chr3_3:3254681-3254700 | Msa0438630:intron | 40.0% | |
| TTTATTCGAGGACCATGAAG+TGG | + | chr3_3:3254711-3254730 | None:intergenic | 40.0% | |
| AAATGCTAACAAGTGCCCTA+AGG | - | chr3_3:3254998-3255017 | Msa0438630:intron | 40.0% | |
| AATGCTAACAAGTGCCCTAA+GGG | - | chr3_3:3254999-3255018 | Msa0438630:intron | 40.0% | |
| GTTTCTTATCAAGTGCCCTT+AGG | + | chr3_3:3255017-3255036 | None:intergenic | 40.0% | |
| ATTCCTTAACCATTGCCCTA+AGG | - | chr3_3:3255137-3255156 | Msa0438630:intron | 40.0% | |
| TTCCTTAACCATTGCCCTAA+GGG | - | chr3_3:3255138-3255157 | Msa0438630:intron | 40.0% | |
| TTTGCTAACCAATGCCCTTA+GGG | + | chr3_3:3255155-3255174 | None:intergenic | 40.0% | |
| ! | TTTTGCTAACCAATGCCCTT+AGG | + | chr3_3:3255156-3255175 | None:intergenic | 40.0% |
| GATTTATACAGAAGCGGTAG+GGG | + | chr3_3:3255518-3255537 | None:intergenic | 40.0% | |
| CTGATTTATACAGAAGCGGT+AGG | + | chr3_3:3255520-3255539 | None:intergenic | 40.0% | |
| !! | GAAGAGATGGTATTGGCTTA+AGG | - | chr3_3:3255585-3255604 | Msa0438630:intron | 40.0% |
| ! | TTGGCTTAAGGTTTTTGCTC+TGG | - | chr3_3:3255597-3255616 | Msa0438630:intron | 40.0% |
| AAGGAGAAGAAACCTCCAAT+AGG | - | chr3_3:3255658-3255677 | Msa0438630:CDS | 40.0% | |
| CACAACTCAAGCTGAATCTA+TGG | - | chr3_3:3255811-3255830 | Msa0438630:intron | 40.0% | |
| CTATGGATGCCAAAACACAT+AGG | + | chr3_3:3256886-3256905 | None:intergenic | 40.0% | |
| !!! | CTATGTGTTTTGGCATCCAT+AGG | - | chr3_3:3256884-3256903 | Msa0438630:CDS | 40.0% |
| GACAAATGGCCTATAACCTA+TGG | + | chr3_3:3256903-3256922 | None:intergenic | 40.0% | |
| !! | ATACCTCAGCTTTTTCTCGA+GGG | + | chr3_3:3256988-3257007 | None:intergenic | 40.0% |
| !! | AATACCTCAGCTTTTTCTCG+AGG | + | chr3_3:3256989-3257008 | None:intergenic | 40.0% |
| ! | CTGATATTGGTTATCGGTGT+TGG | + | chr3_3:3257104-3257123 | None:intergenic | 40.0% |
| TGAACTGGCTACTCTGATAT+TGG | + | chr3_3:3257117-3257136 | None:intergenic | 40.0% | |
| ! | GGAGCTTTAACCATGATCAA+TGG | + | chr3_3:3257256-3257275 | None:intergenic | 40.0% |
| ! | ATTTCTGGAGATAGAGGACT+TGG | + | chr3_3:3257319-3257338 | None:intergenic | 40.0% |
| !! | GGCTTTATTTCTGGAGATAG+AGG | + | chr3_3:3257325-3257344 | None:intergenic | 40.0% |
| CCAAGTTCAGCACATATTGT+AGG | + | chr3_3:3257346-3257365 | None:intergenic | 40.0% | |
| CCTACAATATGTGCTGAACT+TGG | - | chr3_3:3257343-3257362 | Msa0438630:intron | 40.0% | |
| ! | CGAGATCGATTGTCTTTTCA+AGG | - | chr3_3:3257892-3257911 | Msa0438630:CDS | 40.0% |
| ATAAATAGGAAAGCGGTACG+AGG | + | chr3_3:3257952-3257971 | None:intergenic | 40.0% | |
| GAGGGGGATAAAAAAAAAGG+GGG | + | chr3_3:3258052-3258071 | None:intergenic | 40.0% | |
| CTCTTTGATCATGTAAGAGG+GGG | + | chr3_3:3258068-3258087 | None:intergenic | 40.0% | |
| !! | GTTGCTGATTGTGCGTTTTG+GGG | - | chr3_3:3246317-3246336 | Msa0438630:three_prime_UTR | 45.0% |
| !!! | GATTGTGCGTTTTGGGGAAA+TGG | - | chr3_3:3246323-3246342 | Msa0438630:three_prime_UTR | 45.0% |
| GGTTATTGAGCCGCAGTATA+CGG | - | chr3_3:3246457-3246476 | Msa0438630:three_prime_UTR | 45.0% | |
| !!! | GTTTTACTTGGTGTGGGAGA+TGG | - | chr3_3:3246497-3246516 | Msa0438630:three_prime_UTR | 45.0% |
| CGTCATTTACTCATGATGGC+CGG | - | chr3_3:3246642-3246661 | Msa0438630:CDS | 45.0% | |
| GTTACTACGTCGGATTTGAC+TGG | - | chr3_3:3246671-3246690 | Msa0438630:CDS | 45.0% | |
| !! | TGACTGGTGTTATCATCGAG+AGG | - | chr3_3:3246687-3246706 | Msa0438630:intron | 45.0% |
| !! | GACTGGTGTTATCATCGAGA+GGG | - | chr3_3:3246688-3246707 | Msa0438630:intron | 45.0% |
| GCGTGAATTCTGTTGGGAAT+TGG | - | chr3_3:3246721-3246740 | Msa0438630:intron | 45.0% | |
| GGAAACACTTGCAAAGACAC+TGG | - | chr3_3:3246915-3246934 | Msa0438630:intron | 45.0% | |
| CAACACTGTCATTGACACGT+AGG | - | chr3_3:3246947-3246966 | Msa0438630:intron | 45.0% | |
| GGTGTAACCACATGTTGTGT+TGG | - | chr3_3:3247003-3247022 | Msa0438630:intron | 45.0% | |
| TGAGGGATGTGCTTAAGTCT+TGG | - | chr3_3:3247088-3247107 | Msa0438630:intron | 45.0% | |
| CTTTATGTACTACCGCTGTC+AGG | - | chr3_3:3247332-3247351 | Msa0438630:intron | 45.0% | |
| TGGATGCTGTTCTGCTTTAC+TGG | - | chr3_3:3247418-3247437 | Msa0438630:intron | 45.0% | |
| GGATGCTGTTCTGCTTTACT+GGG | - | chr3_3:3247419-3247438 | Msa0438630:intron | 45.0% | |
| !!! | CTTTTAATGATGGGCCCTGA+TGG | - | chr3_3:3247450-3247469 | Msa0438630:CDS | 45.0% |
| ACCAGATAACCGACATACAG+TGG | + | chr3_3:3247739-3247758 | None:intergenic | 45.0% | |
| !!! | GCTTGTGCTGTTTTCTCTTG+TGG | - | chr3_3:3248079-3248098 | Msa0438630:intron | 45.0% |
| AAACATGTCTTACTGAGCGG+TGG | - | chr3_3:3248335-3248354 | Msa0438630:intron | 45.0% | |
| AACATGTCTTACTGAGCGGT+GGG | - | chr3_3:3248336-3248355 | Msa0438630:intron | 45.0% | |
| ATGAAGGAAACCAGCATTCG+TGG | - | chr3_3:3248523-3248542 | Msa0438630:intron | 45.0% | |
| TGAAGGAAACCAGCATTCGT+GGG | - | chr3_3:3248524-3248543 | Msa0438630:intron | 45.0% | |
| TGTAAAACACCCACGAATGC+TGG | + | chr3_3:3248536-3248555 | None:intergenic | 45.0% | |
| CTTACACCATCTGTCCTGAT+TGG | - | chr3_3:3249190-3249209 | Msa0438630:intron | 45.0% | |
| CATTTATCAGGCGACCAATC+AGG | + | chr3_3:3249207-3249226 | None:intergenic | 45.0% | |
| ACCAACATCTGCTTGCATTG+CGG | - | chr3_3:3249230-3249249 | Msa0438630:intron | 45.0% | |
| !! | TGAGGGCATGCTCTTTTCAA+AGG | + | chr3_3:3249605-3249624 | None:intergenic | 45.0% |
| GCAGTTAAAGGATCAAGGAC+GGG | - | chr3_3:3250196-3250215 | Msa0438630:intron | 45.0% | |
| !! | GACGAAAGTGTCGTTAGAGA+AGG | - | chr3_3:3250255-3250274 | Msa0438630:CDS | 45.0% |
| TGTCGTTAGAGAAGGGAGTA+GGG | - | chr3_3:3250263-3250282 | Msa0438630:intron | 45.0% | |
| CAATGAATGAGGAGGGCTAA+GGG | + | chr3_3:3250388-3250407 | None:intergenic | 45.0% | |
| GGAAGAAGCAATGAATGAGG+AGG | + | chr3_3:3250396-3250415 | None:intergenic | 45.0% | |
| ! | CTGACATACTTGGTGGATAC+AGG | - | chr3_3:3250506-3250525 | Msa0438630:intron | 45.0% |
| CATATGAAACGTGTCAGGCA+CGG | + | chr3_3:3250602-3250621 | None:intergenic | 45.0% | |
| AGGTGTCTGACATGTGTTCA+AGG | + | chr3_3:3250643-3250662 | None:intergenic | 45.0% | |
| CACACCTGTTAGACATGTGT+TGG | - | chr3_3:3250705-3250724 | Msa0438630:intron | 45.0% | |
| GTGTCCAACACATGTCTAAC+AGG | + | chr3_3:3250712-3250731 | None:intergenic | 45.0% | |
| TTAGACATGTGTTGGACACG+TGG | - | chr3_3:3250713-3250732 | Msa0438630:intron | 45.0% | |
| !! | GACTACTTTTGTGTAGGAGG+TGG | - | chr3_3:3251430-3251449 | Msa0438630:intron | 45.0% |
| TGTAACAGAGCATGAAGAGG+GGG | + | chr3_3:3251547-3251566 | None:intergenic | 45.0% | |
| GCTGCTCATGCAGACAAAAA+TGG | - | chr3_3:3251653-3251672 | Msa0438630:intron | 45.0% | |
| CAAGCAAGGCAGCTAACTTT+CGG | + | chr3_3:3251682-3251701 | None:intergenic | 45.0% | |
| GGGTTCATGTTCAACAAGCA+AGG | + | chr3_3:3251696-3251715 | None:intergenic | 45.0% | |
| TGAACCCCGTTCATCTAAAC+AGG | - | chr3_3:3251709-3251728 | Msa0438630:intron | 45.0% | |
| TCCACCTGTTTAGATGAACG+GGG | + | chr3_3:3251716-3251735 | None:intergenic | 45.0% | |
| CATCGAATTGGGTGTGACTT+AGG | + | chr3_3:3251807-3251826 | None:intergenic | 45.0% | |
| CTAAGTCACACCCAATTCGA+TGG | - | chr3_3:3251805-3251824 | Msa0438630:intron | 45.0% | |
| CAGAAACCAGCCATCGAATT+GGG | + | chr3_3:3251818-3251837 | None:intergenic | 45.0% | |
| GTTCCTCTCCTGTTAAGCAT+AGG | - | chr3_3:3251880-3251899 | Msa0438630:intron | 45.0% | |
| TCTCCTATGCTTAACAGGAG+AGG | + | chr3_3:3251886-3251905 | None:intergenic | 45.0% | |
| ACATTCAGTCGCCTTCATCA+AGG | + | chr3_3:3251920-3251939 | None:intergenic | 45.0% | |
| TTGATGAAGGCGACTGAATG+TGG | - | chr3_3:3251919-3251938 | Msa0438630:intron | 45.0% | |
| !! | GGAGTTCTTTGGAACCATAC+AGG | - | chr3_3:3252085-3252104 | Msa0438630:intron | 45.0% |
| TGCTAATTGTCTGGCCTGTA+TGG | + | chr3_3:3252102-3252121 | None:intergenic | 45.0% | |
| TACAGGCCAGACAATTAGCA+CGG | - | chr3_3:3252102-3252121 | Msa0438630:intron | 45.0% | |
| TAAGTCCCGTGCTAATTGTC+TGG | + | chr3_3:3252111-3252130 | None:intergenic | 45.0% | |
| !! | CAGTGCTACTTATGCACTCT+TGG | - | chr3_3:3252349-3252368 | Msa0438630:CDS | 45.0% |
| TGGCAGAACAAAGATGCCTT+TGG | + | chr3_3:3252449-3252468 | None:intergenic | 45.0% | |
| GCACACTTTGACTATGGCAA+AGG | + | chr3_3:3252544-3252563 | None:intergenic | 45.0% | |
| TGCAATTTAGAAGCAGGCAG+AGG | - | chr3_3:3253083-3253102 | Msa0438630:intron | 45.0% | |
| AAAGCTAAGTGGCAGGAGTT+GGG | - | chr3_3:3253124-3253143 | Msa0438630:intron | 45.0% | |
| GGGAAATAGAGAGTAGTAGG+GGG | - | chr3_3:3253144-3253163 | Msa0438630:intron | 45.0% | |
| TAGGGGGTCACAAATCACAA+TGG | - | chr3_3:3253160-3253179 | Msa0438630:intron | 45.0% | |
| AGGGGGTCACAAATCACAAT+GGG | - | chr3_3:3253161-3253180 | Msa0438630:intron | 45.0% | |
| ! | GGGTTTAGGATTTCTTGAGG+TGG | - | chr3_3:3253377-3253396 | Msa0438630:intron | 45.0% |
| ACAAGAGTGAGACATGGCAA+GGG | - | chr3_3:3253732-3253751 | Msa0438630:intron | 45.0% | |
| ! | GGCAAGGGCATATTCTATGA+AGG | - | chr3_3:3253747-3253766 | Msa0438630:intron | 45.0% |
| !! | TCCCTGTAATGAGAGCATTC+TGG | + | chr3_3:3253820-3253839 | None:intergenic | 45.0% |
| !!! | AAGTGGACTAGTGTTTTGGG+AGG | - | chr3_3:3253931-3253950 | Msa0438630:intron | 45.0% |
| !!! | CTTCTTTTTTTGCGCGGAAG+CGG | - | chr3_3:3254446-3254465 | Msa0438630:intron | 45.0% |
| AAGAAATGCCACATCCTGCA+TGG | + | chr3_3:3254634-3254653 | None:intergenic | 45.0% | |
| CTCAGCTGCCTTTGATTCAA+AGG | + | chr3_3:3254781-3254800 | None:intergenic | 45.0% | |
| CTTTGAATCAAAGGCAGCTG+AGG | - | chr3_3:3254779-3254798 | Msa0438630:intron | 45.0% | |
| ! | TGGTCACTTCAAGTTCATGC+TGG | + | chr3_3:3255262-3255281 | None:intergenic | 45.0% |
| ACTTGAAGTGACCACAAAGC+AGG | - | chr3_3:3255268-3255287 | Msa0438630:intron | 45.0% | |
| CACAAAAATGGCCTGCTTTG+TGG | + | chr3_3:3255282-3255301 | None:intergenic | 45.0% | |
| !!! | CACAAAGCAGGCCATTTTTG+TGG | - | chr3_3:3255280-3255299 | Msa0438630:intron | 45.0% |
| AATCCGGACTTGTATTGTCC+TGG | - | chr3_3:3255322-3255341 | Msa0438630:intron | 45.0% | |
| ATCCGGACTTGTATTGTCCT+GGG | - | chr3_3:3255323-3255342 | Msa0438630:intron | 45.0% | |
| TTCCCAGGACAATACAAGTC+CGG | + | chr3_3:3255328-3255347 | None:intergenic | 45.0% | |
| ! | GGTTCTAACACTACAGGTGT+CGG | - | chr3_3:3255561-3255580 | Msa0438630:intron | 45.0% |
| TGTCGGAGAAGAGATGGTAT+TGG | - | chr3_3:3255578-3255597 | Msa0438630:intron | 45.0% | |
| ! | TTTTGCTCTGGCCACAATCA+AGG | - | chr3_3:3255609-3255628 | Msa0438630:CDS | 45.0% |
| ! | AATACAACCTGCTTGCTGAG+TGG | + | chr3_3:3255789-3255808 | None:intergenic | 45.0% |
| !! | GTGGCTTTCTAGTTGCAGTT+TGG | - | chr3_3:3255915-3255934 | Msa0438630:intron | 45.0% |
| TGATTCAGTACAACGTGCAG+TGG | - | chr3_3:3256147-3256166 | Msa0438630:intron | 45.0% | |
| AGGTTATAGGCCATTTGTCG+AGG | - | chr3_3:3256904-3256923 | Msa0438630:CDS | 45.0% | |
| TCAATGCATGCCTCGACAAA+TGG | + | chr3_3:3256917-3256936 | None:intergenic | 45.0% | |
| TAGAGGACTTGGCATCTCAA+TGG | + | chr3_3:3257308-3257327 | None:intergenic | 45.0% | |
| GTCGTATGCTCGAATTGGTA+TGG | - | chr3_3:3257759-3257778 | Msa0438630:CDS | 45.0% | |
| TCAAAAGACGGTGAGTTGCT+TGG | - | chr3_3:3257811-3257830 | Msa0438630:CDS | 45.0% | |
| !!! | ATGATATAAATTTAAAATTA+TGG | + | chr3_3:3247151-3247170 | None:intergenic | 5.0% |
| !!! | TTTAATATTTTTTTAGTAAT+TGG | - | chr3_3:3256669-3256688 | Msa0438630:intron | 5.0% |
| AAACCCTAACGCGGTGAAGT+TGG | - | chr3_3:3246397-3246416 | Msa0438630:three_prime_UTR | 50.0% | |
| TCAATAACCGCCATACACCG+TGG | + | chr3_3:3246446-3246465 | None:intergenic | 50.0% | |
| TTCCCAGACACCGTATACTG+CGG | + | chr3_3:3246470-3246489 | None:intergenic | 50.0% | |
| TACGGTGTCTGGGAATGTTG+AGG | - | chr3_3:3246475-3246494 | Msa0438630:three_prime_UTR | 50.0% | |
| !! | TTACTTGGTGTGGGAGATGG+TGG | - | chr3_3:3246500-3246519 | Msa0438630:three_prime_UTR | 50.0% |
| GTGATTGCAGTTGAGGAGGA+CGG | - | chr3_3:3246542-3246561 | Msa0438630:CDS | 50.0% | |
| !! | CTTGGTGGTGAGATGCTAAG+AGG | - | chr3_3:3246575-3246594 | Msa0438630:CDS | 50.0% |
| AAGAGGACCGTTGCAGAAGA+TGG | - | chr3_3:3246592-3246611 | Msa0438630:CDS | 50.0% | |
| GACACCACCATCTTCTGCAA+CGG | + | chr3_3:3246602-3246621 | None:intergenic | 50.0% | |
| ! | TGCAGAAGATGGTGGTGTCA+CGG | - | chr3_3:3246603-3246622 | Msa0438630:CDS | 50.0% |
| CCGACGTAGTAACAAGAAGC+CGG | + | chr3_3:3246664-3246683 | None:intergenic | 50.0% | |
| CCGGCTTCTTGTTACTACGT+CGG | - | chr3_3:3246661-3246680 | Msa0438630:CDS | 50.0% | |
| CGAGGTGCGTGAATTCTGTT+GGG | - | chr3_3:3246715-3246734 | Msa0438630:intron | 50.0% | |
| ACTTGCAAAGACACTGGCAC+TGG | - | chr3_3:3246921-3246940 | Msa0438630:intron | 50.0% | |
| CTTGCAAAGACACTGGCACT+GGG | - | chr3_3:3246922-3246941 | Msa0438630:intron | 50.0% | |
| ! | GCTAGAGCACCATGTGTAAG+TGG | - | chr3_3:3247244-3247263 | Msa0438630:intron | 50.0% |
| ! | AGGTAACCGGTTCTCCATCA+GGG | + | chr3_3:3247467-3247486 | None:intergenic | 50.0% |
| ! | TAGGTAACCGGTTCTCCATC+AGG | + | chr3_3:3247468-3247487 | None:intergenic | 50.0% |
| GAGGTGTAGCCACTGTATGT+CGG | - | chr3_3:3247727-3247746 | Msa0438630:intron | 50.0% | |
| ! | GCCACTGTATGTCGGTTATC+TGG | - | chr3_3:3247735-3247754 | Msa0438630:intron | 50.0% |
| GATAAGATCGTCCCTTCCTG+AGG | - | chr3_3:3248730-3248749 | Msa0438630:intron | 50.0% | |
| TGCTTCAACAGCCTCAGGAA+GGG | + | chr3_3:3248744-3248763 | None:intergenic | 50.0% | |
| ATGCTTCAACAGCCTCAGGA+AGG | + | chr3_3:3248745-3248764 | None:intergenic | 50.0% | |
| ACACATGCTTCAACAGCCTC+AGG | + | chr3_3:3248749-3248768 | None:intergenic | 50.0% | |
| ! | GAAGCATGTGTTGATGCTGC+AGG | - | chr3_3:3248758-3248777 | Msa0438630:intron | 50.0% |
| TCCTAAGGGCAGCCAGTTAT+GGG | - | chr3_3:3248813-3248832 | Msa0438630:CDS | 50.0% | |
| ACAAAAGGCCTGCCCATAAC+TGG | + | chr3_3:3248828-3248847 | None:intergenic | 50.0% | |
| ! | GTTATGGGCAGGCCTTTTGT+AGG | - | chr3_3:3248828-3248847 | Msa0438630:CDS | 50.0% |
| TCCGCAATGCAAGCAGATGT+TGG | + | chr3_3:3249234-3249253 | None:intergenic | 50.0% | |
| TTGCATTACTTGCCGAGTCC+TGG | - | chr3_3:3249397-3249416 | Msa0438630:intron | 50.0% | |
| AGGCAGAAAAGTCCAGGACT+CGG | + | chr3_3:3249412-3249431 | None:intergenic | 50.0% | |
| GGTATGAGCTTGAAGCAGAG+TGG | - | chr3_3:3250233-3250252 | Msa0438630:CDS | 50.0% | |
| ! | GTGTCGTTAGAGAAGGGAGT+AGG | - | chr3_3:3250262-3250281 | Msa0438630:CDS | 50.0% |
| GGAGTAGGGACTGAAGAACA+TGG | - | chr3_3:3250277-3250296 | Msa0438630:intron | 50.0% | |
| GGAGGGCTAAGGGATAGAAA+GGG | + | chr3_3:3250378-3250397 | None:intergenic | 50.0% | |
| AGGAGGGCTAAGGGATAGAA+AGG | + | chr3_3:3250379-3250398 | None:intergenic | 50.0% | |
| GCAATGAATGAGGAGGGCTA+AGG | + | chr3_3:3250389-3250408 | None:intergenic | 50.0% | |
| ACTGAGTCAACACCTGCTCT+TGG | - | chr3_3:3250742-3250761 | Msa0438630:intron | 50.0% | |
| !! | AGAAGTGTTTGGCCAAGAGC+AGG | + | chr3_3:3250757-3250776 | None:intergenic | 50.0% |
| GCTCTTGGCCAAACACTTCT+TGG | - | chr3_3:3250757-3250776 | Msa0438630:intron | 50.0% | |
| ! | AGGAGGTGGTGATAATGCAC+TGG | - | chr3_3:3251444-3251463 | Msa0438630:intron | 50.0% |
| ! | GGAGGTGGTGATAATGCACT+GGG | - | chr3_3:3251445-3251464 | Msa0438630:intron | 50.0% |
| ATGAGCAGCAACTGCTGCAT+AGG | + | chr3_3:3251642-3251661 | None:intergenic | 50.0% | |
| ACCCCGTTCATCTAAACAGG+TGG | - | chr3_3:3251712-3251731 | Msa0438630:intron | 50.0% | |
| TGGGTGTGACTTAGGGATGA+GGG | + | chr3_3:3251799-3251818 | None:intergenic | 50.0% | |
| TTGGGTGTGACTTAGGGATG+AGG | + | chr3_3:3251800-3251819 | None:intergenic | 50.0% | |
| CCAGAAACCAGCCATCGAAT+TGG | + | chr3_3:3251819-3251838 | None:intergenic | 50.0% | |
| !! | CCAATTCGATGGCTGGTTTC+TGG | - | chr3_3:3251816-3251835 | Msa0438630:intron | 50.0% |
| !! | TTCGATGGCTGGTTTCTGGT+TGG | - | chr3_3:3251820-3251839 | Msa0438630:intron | 50.0% |
| AGGCAACCGTTGGAGTTCTT+TGG | - | chr3_3:3252074-3252093 | Msa0438630:intron | 50.0% | |
| ACAGGCCAGACAATTAGCAC+GGG | - | chr3_3:3252103-3252122 | Msa0438630:intron | 50.0% | |
| AAGGGGACAAAGGTTGACAG+CGG | + | chr3_3:3252525-3252544 | None:intergenic | 50.0% | |
| GACTATGGCAAAGGGGACAA+AGG | + | chr3_3:3252535-3252554 | None:intergenic | 50.0% | |
| !! | TGGGGCACTGGAATAGTTTG+TGG | - | chr3_3:3252768-3252787 | Msa0438630:CDS | 50.0% |
| TGCAGGACTCGATGAAGAAC+TGG | - | chr3_3:3252901-3252920 | Msa0438630:intron | 50.0% | |
| GGACTCGATGAAGAACTGGA+TGG | - | chr3_3:3252905-3252924 | Msa0438630:intron | 50.0% | |
| TTTAGAAGCAGGCAGAGGTG+CGG | - | chr3_3:3253088-3253107 | Msa0438630:intron | 50.0% | |
| GGCAACAAGGGAAAGCTAAG+TGG | - | chr3_3:3253113-3253132 | Msa0438630:intron | 50.0% | |
| ACAAGGGAAAGCTAAGTGGC+AGG | - | chr3_3:3253117-3253136 | Msa0438630:intron | 50.0% | |
| GAAAGCTAAGTGGCAGGAGT+TGG | - | chr3_3:3253123-3253142 | Msa0438630:intron | 50.0% | |
| AGTGTATGATGCAACACGGG+TGG | - | chr3_3:3253309-3253328 | Msa0438630:intron | 50.0% | |
| GAGGTGGGTGATGAAGTATG+TGG | - | chr3_3:3253393-3253412 | Msa0438630:intron | 50.0% | |
| TGCCACACAAGAGTGAGACA+TGG | - | chr3_3:3253726-3253745 | Msa0438630:intron | 50.0% | |
| TGCCATGTCTCACTCTTGTG+TGG | + | chr3_3:3253731-3253750 | None:intergenic | 50.0% | |
| CACAAGAGTGAGACATGGCA+AGG | - | chr3_3:3253731-3253750 | Msa0438630:intron | 50.0% | |
| CGCTTCCGCGCAAAAAAAGA+AGG | + | chr3_3:3254448-3254467 | None:intergenic | 50.0% | |
| AGCAAGGGATCTCCACTTCA+TGG | - | chr3_3:3254696-3254715 | Msa0438630:intron | 50.0% | |
| TGCCCTTAGGGCAATGGTTA+AGG | + | chr3_3:3255143-3255162 | None:intergenic | 50.0% | |
| ! | AACCATTGCCCTAAGGGCAT+TGG | - | chr3_3:3255144-3255163 | Msa0438630:intron | 50.0% |
| AACCAATGCCCTTAGGGCAA+TGG | + | chr3_3:3255149-3255168 | None:intergenic | 50.0% | |
| GCGGTAGGGGTCATAAAAAG+TGG | + | chr3_3:3255505-3255524 | None:intergenic | 50.0% | |
| !! | TACAGGTGTCGGAGAAGAGA+TGG | - | chr3_3:3255572-3255591 | Msa0438630:intron | 50.0% |
| TCTGGCCACAATCAAGGACT+GGG | - | chr3_3:3255615-3255634 | Msa0438630:CDS | 50.0% | |
| TCTCGAGGGTCTGCAAGTTT+GGG | + | chr3_3:3256974-3256993 | None:intergenic | 50.0% | |
| TTCTCGAGGGTCTGCAAGTT+TGG | + | chr3_3:3256975-3256994 | None:intergenic | 50.0% | |
| AGACCCTCGAGAAAAAGCTG+AGG | - | chr3_3:3256982-3257001 | Msa0438630:CDS | 50.0% | |
| GGACAGTCGTATGCTCGAAT+TGG | - | chr3_3:3257754-3257773 | Msa0438630:CDS | 50.0% | |
| TGCTCGAATTGGTATGGCCA+AGG | - | chr3_3:3257765-3257784 | Msa0438630:CDS | 50.0% | |
| GCTGCTGCACAGTCAAAAGA+CGG | - | chr3_3:3257799-3257818 | Msa0438630:CDS | 50.0% | |
| AAGACGGTGAGTTGCTTGGT+CGG | - | chr3_3:3257815-3257834 | Msa0438630:CDS | 50.0% | |
| TACGAGGAGGCAGAAAAGTC+AGG | + | chr3_3:3257936-3257955 | None:intergenic | 50.0% | |
| AATAGGAAAGCGGTACGAGG+AGG | + | chr3_3:3257949-3257968 | None:intergenic | 50.0% | |
| CAGCCAACTTCACCGCGTTA+GGG | + | chr3_3:3246403-3246422 | None:intergenic | 55.0% | |
| TCAGCCAACTTCACCGCGTT+AGG | + | chr3_3:3246404-3246423 | None:intergenic | 55.0% | |
| ATAACCGCCATACACCGTGG+CGG | + | chr3_3:3246443-3246462 | None:intergenic | 55.0% | |
| AGCCGCAGTATACGGTGTCT+GGG | - | chr3_3:3246465-3246484 | Msa0438630:three_prime_UTR | 55.0% | |
| AGGACCGTTGCAGAAGATGG+TGG | - | chr3_3:3246595-3246614 | Msa0438630:CDS | 55.0% | |
| !! | GCAGAAGATGGTGGTGTCAC+GGG | - | chr3_3:3246604-3246623 | Msa0438630:CDS | 55.0% |
| !! | AAGATGGTGGTGTCACGGGA+TGG | - | chr3_3:3246608-3246627 | Msa0438630:CDS | 55.0% |
| !! | AGATGGTGGTGTCACGGGAT+GGG | - | chr3_3:3246609-3246628 | Msa0438630:CDS | 55.0% |
| ! | TATCATCGAGAGGGAGTGCG+AGG | - | chr3_3:3246697-3246716 | Msa0438630:intron | 55.0% |
| GCGAGGTGCGTGAATTCTGT+TGG | - | chr3_3:3246714-3246733 | Msa0438630:intron | 55.0% | |
| ! | TTCCTCCAGAGCAGCTTGCT+TGG | - | chr3_3:3247388-3247407 | Msa0438630:intron | 55.0% |
| !! | GCAGCTTGCTTGGTGTGGAA+TGG | - | chr3_3:3247398-3247417 | Msa0438630:intron | 55.0% |
| TTCCTGAGTGCGATGGAGTG+AGG | - | chr3_3:3247514-3247533 | Msa0438630:CDS | 55.0% | |
| ATCCTCACTCCATCGCACTC+AGG | + | chr3_3:3247519-3247538 | None:intergenic | 55.0% | |
| GCGTCATACAGCAAAGCTGC+GGG | + | chr3_3:3247621-3247640 | None:intergenic | 55.0% | |
| CGCGTCATACAGCAAAGCTG+CGG | + | chr3_3:3247622-3247641 | None:intergenic | 55.0% | |
| GCGCCAACGAACTCTCCTAA+GGG | - | chr3_3:3248799-3248818 | Msa0438630:CDS | 55.0% | |
| CTGCCCTTAGGAGAGTTCGT+TGG | + | chr3_3:3248805-3248824 | None:intergenic | 55.0% | |
| CTCCTAAGGGCAGCCAGTTA+TGG | - | chr3_3:3248812-3248831 | Msa0438630:CDS | 55.0% | |
| !! | GCAGTGCGCAGCTTTGAGAT+CGG | - | chr3_3:3249058-3249077 | Msa0438630:intron | 55.0% |
| AGGCGACCAATCAGGACAGA+TGG | + | chr3_3:3249199-3249218 | None:intergenic | 55.0% | |
| ! | AGGATCAAGGACGGGCTCAT+AGG | - | chr3_3:3250204-3250223 | Msa0438630:intron | 55.0% |
| ! | GGATCAAGGACGGGCTCATA+GGG | - | chr3_3:3250205-3250224 | Msa0438630:intron | 55.0% |
| ACAGAGCATGAAGAGGGGGA+GGG | + | chr3_3:3251543-3251562 | None:intergenic | 55.0% | |
| AACAGAGCATGAAGAGGGGG+AGG | + | chr3_3:3251544-3251563 | None:intergenic | 55.0% | |
| GCAAGGCAGCTAACTTTCGG+CGG | + | chr3_3:3251679-3251698 | None:intergenic | 55.0% | |
| GGGTGTGACTTAGGGATGAG+GGG | + | chr3_3:3251798-3251817 | None:intergenic | 55.0% | |
| GTCACACCCAATTCGATGGC+TGG | - | chr3_3:3251809-3251828 | Msa0438630:intron | 55.0% | |
| GATGATGCAGAGGCAACCGT+TGG | - | chr3_3:3252064-3252083 | Msa0438630:intron | 55.0% | |
| ! | AGAGGTGCGGTTGGCAACAA+GGG | - | chr3_3:3253101-3253120 | Msa0438630:intron | 55.0% |
| GGAGATCCCTTGCTTGCCAT+GGG | + | chr3_3:3254690-3254709 | None:intergenic | 55.0% | |
| TGGAGATCCCTTGCTTGCCA+TGG | + | chr3_3:3254691-3254710 | None:intergenic | 55.0% | |
| ACGCAGCTCGATGATTTCCC+AGG | + | chr3_3:3255343-3255362 | None:intergenic | 55.0% | |
| CTCTGGCCACAATCAAGGAC+TGG | - | chr3_3:3255614-3255633 | Msa0438630:CDS | 55.0% | |
| TCACATGCCACTCAGCAAGC+AGG | - | chr3_3:3255779-3255798 | Msa0438630:intron | 55.0% | |
| TGGTATGGCCAAGGAAGCTG+CGG | - | chr3_3:3257774-3257793 | Msa0438630:CDS | 55.0% | |
| CGCGGTGAAGTTGGCTGATC+CGG | - | chr3_3:3246406-3246425 | Msa0438630:three_prime_UTR | 60.0% | |
| GCGGTGAAGTTGGCTGATCC+GGG | - | chr3_3:3246407-3246426 | Msa0438630:three_prime_UTR | 60.0% | |
| CGGTGAAGTTGGCTGATCCG+GGG | - | chr3_3:3246408-3246427 | Msa0438630:three_prime_UTR | 60.0% | |
| GTTGGCTGATCCGGGGATTG+TGG | - | chr3_3:3246415-3246434 | Msa0438630:three_prime_UTR | 60.0% | |
| GAGCCGCAGTATACGGTGTC+TGG | - | chr3_3:3246464-3246483 | Msa0438630:three_prime_UTR | 60.0% | |
| ! | TGGTGTGGGAGATGGTGGTG+AGG | - | chr3_3:3246505-3246524 | Msa0438630:three_prime_UTR | 60.0% |
| ! | TGTGGGAGATGGTGGTGAGG+AGG | - | chr3_3:3246508-3246527 | Msa0438630:exon | 60.0% |
| ! | TGGTGGTGAGGAGGAGGATG+CGG | - | chr3_3:3246517-3246536 | Msa0438630:exon | 60.0% |
| TGCGGCGGTGATTGCAGTTG+AGG | - | chr3_3:3246535-3246554 | Msa0438630:CDS | 60.0% | |
| GGCGGTGATTGCAGTTGAGG+AGG | - | chr3_3:3246538-3246557 | Msa0438630:CDS | 60.0% | |
| TTGAGGAGGACGGTGTGCAG+AGG | - | chr3_3:3246552-3246571 | Msa0438630:CDS | 60.0% | |
| !! | TGGTGTCACGGGATGGGAAG+TGG | - | chr3_3:3246615-3246634 | Msa0438630:CDS | 60.0% |
| CACCAAGCAAGCTGCTCTGG+AGG | + | chr3_3:3247393-3247412 | None:intergenic | 60.0% | |
| CCACACCAAGCAAGCTGCTC+TGG | + | chr3_3:3247396-3247415 | None:intergenic | 60.0% | |
| ! | CCAGAGCAGCTTGCTTGGTG+TGG | - | chr3_3:3247393-3247412 | Msa0438630:intron | 60.0% |
| GATGGGCCCTGATGGAGAAC+CGG | - | chr3_3:3247458-3247477 | Msa0438630:CDS | 60.0% | |
| CGCGCCAACGAACTCTCCTA+AGG | - | chr3_3:3248798-3248817 | Msa0438630:CDS | 60.0% | |
| GCCCATAACTGGCTGCCCTT+AGG | + | chr3_3:3248817-3248836 | None:intergenic | 60.0% | |
| AAGGGCAGCCAGTTATGGGC+AGG | - | chr3_3:3248817-3248836 | Msa0438630:CDS | 60.0% | |
| TCAGGCACGGCACATTGGAG+AGG | + | chr3_3:3250589-3250608 | None:intergenic | 60.0% | |
| ACGTGTCAGGCACGGCACAT+TGG | + | chr3_3:3250594-3250613 | None:intergenic | 60.0% | |
| CAGAGCATGAAGAGGGGGAG+GGG | + | chr3_3:3251542-3251561 | None:intergenic | 60.0% | |
| GGGACAAAGGTTGACAGCGG+TGG | + | chr3_3:3252522-3252541 | None:intergenic | 60.0% | |
| CAATGCTGTTGCTGGGGCAC+TGG | - | chr3_3:3252756-3252775 | Msa0438630:CDS | 60.0% | |
| ! | CAGAGGTGCGGTTGGCAACA+AGG | - | chr3_3:3253100-3253119 | Msa0438630:intron | 60.0% |
| TGATGCAACACGGGTGGCTG+TGG | - | chr3_3:3253315-3253334 | Msa0438630:intron | 60.0% | |
| GGCAGCCCAGTCCTTGATTG+TGG | + | chr3_3:3255623-3255642 | None:intergenic | 60.0% | |
| AGCAGCATCCGCAGCTTCCT+TGG | + | chr3_3:3257785-3257804 | None:intergenic | 60.0% | |
| TGTGGAGCCGCCACGGTGTA+TGG | - | chr3_3:3246433-3246452 | Msa0438630:three_prime_UTR | 65.0% | |
| ! | GGGAGATGGTGGTGAGGAGG+AGG | - | chr3_3:3246511-3246530 | Msa0438630:exon | 65.0% |
| TGGTGAGGAGGAGGATGCGG+CGG | - | chr3_3:3246520-3246539 | Msa0438630:exon | 65.0% | |
| GAGGACGGTGTGCAGAGGCT+TGG | - | chr3_3:3246557-3246576 | Msa0438630:CDS | 65.0% | |
| GACGGTGTGCAGAGGCTTGG+TGG | - | chr3_3:3246560-3246579 | Msa0438630:CDS | 65.0% | |
| ! | GGACGGGCTCATAGGGTGCT+TGG | - | chr3_3:3250212-3250231 | Msa0438630:intron | 65.0% |
| ! | GAAGCAGGCAGAGGTGCGGT+TGG | - | chr3_3:3253092-3253111 | Msa0438630:intron | 65.0% |
| CGTGGCGGCTCCACAATCCC+CGG | + | chr3_3:3246428-3246447 | None:intergenic | 70.0% | |
| CGGGGATTGTGGAGCCGCCA+CGG | - | chr3_3:3246426-3246445 | Msa0438630:three_prime_UTR | 70.0% | |
| GGAGCCGCCACGGTGTATGG+CGG | - | chr3_3:3246436-3246455 | Msa0438630:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 3246278 | 3258173 | 3246278 | ID=Msa0438630;Name=Msa0438630 |
| chr3_3 | mRNA | 3246278 | 3258173 | 3246278 | ID=Msa0438630-mRNA-1;Parent=Msa0438630;Name=Msa0438630-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.92|0.86|1|0.85|0.93|15|249|732 |
| chr3_3 | exon | 3246278 | 3246691 | 3246278 | ID=Msa0438630-mRNA-1:exon:744;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3247448 | 3247545 | 3247448 | ID=Msa0438630-mRNA-1:exon:743;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3248772 | 3248874 | 3248772 | ID=Msa0438630-mRNA-1:exon:742;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3249066 | 3249195 | 3249066 | ID=Msa0438630-mRNA-1:exon:741;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3249631 | 3249812 | 3249631 | ID=Msa0438630-mRNA-1:exon:740;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3250218 | 3250281 | 3250218 | ID=Msa0438630-mRNA-1:exon:739;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3252304 | 3252377 | 3252304 | ID=Msa0438630-mRNA-1:exon:738;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3252464 | 3252571 | 3252464 | ID=Msa0438630-mRNA-1:exon:737;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3252721 | 3252834 | 3252721 | ID=Msa0438630-mRNA-1:exon:736;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3252916 | 3253005 | 3252916 | ID=Msa0438630-mRNA-1:exon:735;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3255172 | 3255264 | 3255172 | ID=Msa0438630-mRNA-1:exon:734;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3255343 | 3255448 | 3255343 | ID=Msa0438630-mRNA-1:exon:733;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3255602 | 3255741 | 3255602 | ID=Msa0438630-mRNA-1:exon:732;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3256780 | 3257070 | 3256780 | ID=Msa0438630-mRNA-1:exon:731;Parent=Msa0438630-mRNA-1 |
| chr3_3 | exon | 3257733 | 3258173 | 3257733 | ID=Msa0438630-mRNA-1:exon:730;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3257733 | 3258173 | 3257733 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3256780 | 3257070 | 3256780 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3255602 | 3255741 | 3255602 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3255343 | 3255448 | 3255343 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3255172 | 3255264 | 3255172 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3252916 | 3253005 | 3252916 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3252721 | 3252834 | 3252721 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3252464 | 3252571 | 3252464 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3252304 | 3252377 | 3252304 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3250218 | 3250281 | 3250218 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3249631 | 3249812 | 3249631 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3249066 | 3249195 | 3249066 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3248772 | 3248874 | 3248772 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3247448 | 3247545 | 3247448 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | CDS | 3246527 | 3246691 | 3246527 | ID=Msa0438630-mRNA-1:cds;Parent=Msa0438630-mRNA-1 |
| chr3_3 | three_prime_UTR | 3246278 | 3246526 | 3246278 | ID=Msa0438630-mRNA-1:three_prime_utr;Parent=Msa0438630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
