Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0246590 | XP_013463568.1 | 91.244 | 217 | 16 | 1 | 1 | 217 | 1 | 214 | 5.82e-142 | 405 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0246590 | sp|Q84QC2|ERF17_ARATH | 49.275 | 207 | 68 | 6 | 17 | 217 | 10 | 185 | 5.68e-53 | 171 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0246590 | I3SZ39 | 91.244 | 217 | 16 | 1 | 1 | 217 | 1 | 214 | 2.78e-142 | 405 |
Gene ID | Type | Classification |
---|---|---|
Msa0246590 | TF | AP2/ERF-ERF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0203420 | Msa0246590 | 0.812397 | 4.327339e-51 | -8.615850e-47 |
Msa0203450 | Msa0246590 | 0.896431 | 3.713100e-76 | -8.615850e-47 |
Msa0246590 | Msa0285070 | 0.945546 | 2.494361e-104 | -8.615850e-47 |
Msa0246590 | Msa0358110 | 0.800494 | 1.404079e-48 | -8.615850e-47 |
Msa0246590 | Msa0437070 | 0.805917 | 1.059058e-49 | -8.615850e-47 |
Msa0246590 | Msa0556150 | 0.810849 | 9.393195e-51 | -8.615850e-47 |
Msa0246590 | Msa0556160 | 0.816458 | 5.473497e-52 | -8.615850e-47 |
Msa0246590 | Msa0651740 | 0.824752 | 6.808649e-54 | -8.615850e-47 |
Msa0246590 | Msa0748660 | 0.809198 | 2.129944e-50 | -8.615850e-47 |
Msa0246590 | Msa1361250 | 0.824298 | 8.706838e-54 | -8.615850e-47 |
Msa0246590 | Msa1421900 | 0.802605 | 5.182888e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0246590 | MtrunA17_Chr2g0301191 | 91.244 | 217 | 16 | 1 | 1 | 217 | 1 | 214 | 5.35e-146 | 405 |
Msa0246590 | MtrunA17_Chr2g0301171 | 72.350 | 217 | 45 | 3 | 1 | 217 | 1 | 202 | 5.42e-107 | 306 |
Msa0246590 | MtrunA17_Chr2g0301181 | 63.025 | 238 | 59 | 4 | 1 | 217 | 1 | 230 | 1.01e-97 | 283 |
Msa0246590 | MtrunA17_Chr1g0150691 | 62.037 | 108 | 30 | 2 | 5 | 101 | 4 | 111 | 3.34e-40 | 137 |
Msa0246590 | MtrunA17_Chr1g0150631 | 66.316 | 95 | 25 | 1 | 14 | 101 | 33 | 127 | 1.40e-39 | 135 |
Msa0246590 | MtrunA17_Chr1g0150671 | 52.518 | 139 | 59 | 2 | 14 | 148 | 41 | 176 | 1.02e-38 | 135 |
Msa0246590 | MtrunA17_Chr1g0150661 | 65.934 | 91 | 24 | 1 | 18 | 101 | 34 | 124 | 8.28e-38 | 130 |
Msa0246590 | MtrunA17_Chr3g0136551 | 65.517 | 87 | 26 | 1 | 19 | 101 | 65 | 151 | 1.93e-34 | 123 |
Msa0246590 | MtrunA17_Chr3g0136541 | 65.882 | 85 | 25 | 1 | 21 | 101 | 42 | 126 | 1.79e-33 | 120 |
Msa0246590 | MtrunA17_Chr7g0225131 | 72.059 | 68 | 16 | 1 | 14 | 81 | 24 | 88 | 6.40e-30 | 106 |
Msa0246590 | MtrunA17_Chr4g0017851 | 50.000 | 90 | 45 | 0 | 11 | 100 | 110 | 199 | 1.56e-23 | 95.9 |
Msa0246590 | MtrunA17_Chr7g0275841 | 51.316 | 76 | 37 | 0 | 18 | 93 | 27 | 102 | 3.49e-23 | 91.7 |
Msa0246590 | MtrunA17_Chr3g0115631 | 57.534 | 73 | 25 | 1 | 4 | 76 | 141 | 207 | 7.79e-22 | 91.7 |
Msa0246590 | MtrunA17_Chr3g0134161 | 57.534 | 73 | 22 | 1 | 3 | 75 | 38 | 101 | 8.58e-22 | 88.2 |
Msa0246590 | MtrunA17_Chr5g0425561 | 50.633 | 79 | 39 | 0 | 6 | 84 | 160 | 238 | 2.70e-21 | 90.5 |
Msa0246590 | MtrunA17_Chr3g0140161 | 46.591 | 88 | 47 | 0 | 14 | 101 | 38 | 125 | 6.29e-21 | 86.3 |
Msa0246590 | MtrunA17_Chr6g0486701 | 53.947 | 76 | 35 | 0 | 18 | 93 | 43 | 118 | 7.40e-21 | 86.7 |
Msa0246590 | MtrunA17_Chr7g0232261 | 51.316 | 76 | 37 | 0 | 19 | 94 | 61 | 136 | 9.65e-21 | 86.7 |
Msa0246590 | MtrunA17_Chr5g0401871 | 52.439 | 82 | 35 | 2 | 19 | 96 | 25 | 106 | 1.23e-20 | 85.1 |
Msa0246590 | MtrunA17_Chr8g0346741 | 46.154 | 78 | 34 | 1 | 18 | 87 | 38 | 115 | 1.24e-20 | 85.1 |
Msa0246590 | MtrunA17_Chr2g0324131 | 58.730 | 63 | 26 | 0 | 14 | 76 | 213 | 275 | 1.96e-20 | 88.6 |
Msa0246590 | MtrunA17_Chr1g0153151 | 48.315 | 89 | 38 | 1 | 19 | 99 | 44 | 132 | 2.32e-20 | 84.3 |
Msa0246590 | MtrunA17_Chr1g0196781 | 57.627 | 59 | 25 | 0 | 18 | 76 | 151 | 209 | 2.78e-20 | 87.0 |
Msa0246590 | MtrunA17_Chr8g0382491 | 57.377 | 61 | 26 | 0 | 16 | 76 | 110 | 170 | 4.21e-20 | 86.3 |
Msa0246590 | MtrunA17_Chr5g0399441 | 44.340 | 106 | 59 | 0 | 2 | 107 | 11 | 116 | 7.40e-20 | 83.2 |
Msa0246590 | MtrunA17_Chr2g0334031 | 47.561 | 82 | 43 | 0 | 12 | 93 | 110 | 191 | 8.35e-20 | 86.3 |
Msa0246590 | MtrunA17_Chr2g0316931 | 41.818 | 110 | 52 | 1 | 19 | 128 | 31 | 128 | 9.00e-20 | 83.6 |
Msa0246590 | MtrunA17_Chr8g0334801 | 46.535 | 101 | 46 | 1 | 2 | 102 | 43 | 135 | 5.52e-19 | 81.6 |
Msa0246590 | MtrunA17_Chr4g0055951 | 44.578 | 83 | 46 | 0 | 12 | 94 | 67 | 149 | 5.58e-19 | 82.4 |
Msa0246590 | MtrunA17_Chr1g0195151 | 48.684 | 76 | 38 | 1 | 2 | 77 | 61 | 135 | 1.33e-18 | 82.4 |
Msa0246590 | MtrunA17_Chr2g0331231 | 45.455 | 77 | 42 | 0 | 18 | 94 | 40 | 116 | 1.50e-18 | 80.5 |
Msa0246590 | MtrunA17_Chr1g0170531 | 52.174 | 69 | 32 | 1 | 10 | 77 | 80 | 148 | 2.26e-18 | 80.5 |
Msa0246590 | MtrunA17_Chr2g0282621 | 53.623 | 69 | 30 | 1 | 19 | 87 | 15 | 81 | 2.71e-18 | 79.0 |
Msa0246590 | MtrunA17_Chr7g0221501 | 45.570 | 79 | 39 | 1 | 1 | 75 | 29 | 107 | 3.38e-18 | 78.6 |
Msa0246590 | MtrunA17_Chr3g0114761 | 50.000 | 114 | 47 | 4 | 1 | 104 | 1 | 114 | 5.91e-18 | 79.0 |
Msa0246590 | MtrunA17_Chr8g0390091 | 43.182 | 88 | 49 | 1 | 7 | 93 | 24 | 111 | 7.35e-18 | 79.0 |
Msa0246590 | MtrunA17_Chr4g0055781 | 47.619 | 84 | 41 | 2 | 6 | 88 | 91 | 172 | 7.75e-18 | 79.3 |
Msa0246590 | MtrunA17_Chr2g0295421 | 49.254 | 67 | 34 | 0 | 12 | 78 | 89 | 155 | 8.86e-18 | 79.3 |
Msa0246590 | MtrunA17_Chr3g0099871 | 59.649 | 57 | 23 | 0 | 19 | 75 | 27 | 83 | 9.76e-18 | 78.6 |
Msa0246590 | MtrunA17_Chr4g0063751 | 42.169 | 83 | 48 | 0 | 16 | 98 | 4 | 86 | 1.37e-17 | 77.8 |
Msa0246590 | MtrunA17_Chr8g0344961 | 43.373 | 83 | 47 | 0 | 11 | 93 | 116 | 198 | 1.46e-17 | 80.1 |
Msa0246590 | MtrunA17_Chr8g0335331 | 59.322 | 59 | 23 | 1 | 19 | 76 | 125 | 183 | 1.87e-17 | 77.4 |
Msa0246590 | MtrunA17_Chr3g0137174 | 55.000 | 60 | 27 | 0 | 19 | 78 | 8 | 67 | 2.02e-17 | 77.0 |
Msa0246590 | MtrunA17_Chr8g0367911 | 57.143 | 56 | 24 | 0 | 19 | 74 | 44 | 99 | 2.03e-17 | 79.0 |
Msa0246590 | MtrunA17_Chr8g0340311 | 46.667 | 75 | 40 | 0 | 19 | 93 | 47 | 121 | 2.08e-17 | 77.4 |
Msa0246590 | MtrunA17_Chr8g0335311 | 59.322 | 59 | 23 | 1 | 19 | 76 | 96 | 154 | 2.31e-17 | 77.0 |
Msa0246590 | MtrunA17_Chr5g0396301 | 41.379 | 87 | 46 | 2 | 19 | 100 | 18 | 104 | 2.91e-17 | 75.9 |
Msa0246590 | MtrunA17_Chr2g0282651 | 55.556 | 63 | 28 | 0 | 19 | 81 | 70 | 132 | 3.00e-17 | 77.8 |
Msa0246590 | MtrunA17_Chr1g0183981 | 35.862 | 145 | 72 | 5 | 1 | 132 | 56 | 192 | 4.23e-17 | 76.6 |
Msa0246590 | MtrunA17_Chr2g0321071 | 43.182 | 88 | 48 | 2 | 18 | 103 | 46 | 133 | 5.08e-17 | 76.6 |
Msa0246590 | MtrunA17_Chr1g0186671 | 60.000 | 60 | 23 | 1 | 19 | 77 | 19 | 78 | 5.13e-17 | 74.7 |
Msa0246590 | MtrunA17_Chr4g0002631 | 55.000 | 60 | 27 | 0 | 19 | 78 | 8 | 67 | 5.49e-17 | 75.9 |
Msa0246590 | MtrunA17_Chr7g0221471 | 54.386 | 57 | 26 | 0 | 19 | 75 | 51 | 107 | 5.55e-17 | 75.5 |
Msa0246590 | MtrunA17_Chr6g0473961 | 41.000 | 100 | 52 | 1 | 18 | 117 | 53 | 145 | 6.13e-17 | 76.3 |
Msa0246590 | MtrunA17_Chr4g0003421 | 53.333 | 60 | 28 | 0 | 16 | 75 | 37 | 96 | 8.15e-17 | 76.6 |
Msa0246590 | MtrunA17_Chr5g0438801 | 57.895 | 57 | 24 | 0 | 19 | 75 | 51 | 107 | 9.04e-17 | 77.0 |
Msa0246590 | MtrunA17_Chr1g0186731 | 56.667 | 60 | 25 | 1 | 19 | 77 | 21 | 80 | 9.38e-17 | 73.9 |
Msa0246590 | MtrunA17_Chr2g0333011 | 48.485 | 66 | 34 | 0 | 15 | 80 | 3 | 68 | 1.04e-16 | 74.7 |
Msa0246590 | MtrunA17_Chr4g0046161 | 56.452 | 62 | 22 | 2 | 19 | 77 | 57 | 116 | 1.26e-16 | 73.2 |
Msa0246590 | MtrunA17_Chr4g0055801 | 52.113 | 71 | 31 | 2 | 6 | 75 | 143 | 211 | 1.37e-16 | 76.6 |
Msa0246590 | MtrunA17_Chr6g0486711 | 50.000 | 84 | 42 | 0 | 18 | 101 | 48 | 131 | 1.59e-16 | 75.5 |
Msa0246590 | MtrunA17_Chr5g0438831 | 56.140 | 57 | 25 | 0 | 19 | 75 | 46 | 102 | 1.85e-16 | 76.3 |
Msa0246590 | MtrunA17_Chr6g0473981 | 41.000 | 100 | 52 | 1 | 18 | 117 | 53 | 145 | 1.88e-16 | 75.5 |
Msa0246590 | MtrunA17_Chr4g0044881 | 52.381 | 63 | 30 | 0 | 13 | 75 | 108 | 170 | 2.29e-16 | 75.1 |
Msa0246590 | MtrunA17_Chr5g0412641 | 53.968 | 63 | 27 | 1 | 19 | 79 | 46 | 108 | 2.37e-16 | 76.6 |
Msa0246590 | MtrunA17_Chr8g0335321 | 40.426 | 94 | 50 | 2 | 4 | 91 | 81 | 174 | 3.94e-16 | 73.9 |
Msa0246590 | MtrunA17_Chr1g0184081 | 55.000 | 60 | 26 | 1 | 19 | 77 | 21 | 80 | 3.95e-16 | 72.4 |
Msa0246590 | MtrunA17_Chr4g0044871 | 56.140 | 57 | 25 | 0 | 19 | 75 | 96 | 152 | 4.08e-16 | 74.3 |
Msa0246590 | MtrunA17_Chr4g0044911 | 56.140 | 57 | 25 | 0 | 19 | 75 | 96 | 152 | 4.41e-16 | 74.3 |
Msa0246590 | MtrunA17_Chr2g0323171 | 56.897 | 58 | 25 | 0 | 19 | 76 | 65 | 122 | 4.59e-16 | 73.2 |
Msa0246590 | MtrunA17_Chr5g0396181 | 46.392 | 97 | 45 | 1 | 4 | 100 | 13 | 102 | 5.42e-16 | 73.2 |
Msa0246590 | MtrunA17_Chr8g0375031 | 55.357 | 56 | 25 | 0 | 19 | 74 | 125 | 180 | 6.49e-16 | 73.6 |
Msa0246590 | MtrunA17_Chr4g0044901 | 56.140 | 57 | 25 | 0 | 19 | 75 | 96 | 152 | 7.38e-16 | 73.6 |
Msa0246590 | MtrunA17_Chr4g0023411 | 55.172 | 58 | 26 | 0 | 19 | 76 | 65 | 122 | 7.40e-16 | 72.8 |
Msa0246590 | MtrunA17_Chr7g0265851 | 54.237 | 59 | 27 | 0 | 18 | 76 | 23 | 81 | 1.10e-15 | 72.8 |
Msa0246590 | MtrunA17_Chr8g0383591 | 52.542 | 59 | 28 | 0 | 19 | 77 | 145 | 203 | 1.14e-15 | 74.3 |
Msa0246590 | MtrunA17_Chr6g0474001 | 40.000 | 100 | 53 | 1 | 18 | 117 | 53 | 145 | 1.43e-15 | 73.6 |
Msa0246590 | MtrunA17_Chr2g0283171 | 54.098 | 61 | 25 | 2 | 19 | 77 | 63 | 122 | 1.51e-15 | 71.2 |
Msa0246590 | MtrunA17_Chr1g0158971 | 34.454 | 119 | 69 | 2 | 19 | 136 | 115 | 225 | 1.97e-15 | 73.9 |
Msa0246590 | MtrunA17_Chr6g0473931 | 41.000 | 100 | 52 | 1 | 18 | 117 | 32 | 124 | 2.20e-15 | 71.6 |
Msa0246590 | MtrunA17_Chr1g0146191 | 50.000 | 76 | 38 | 0 | 18 | 93 | 46 | 121 | 2.31e-15 | 72.8 |
Msa0246590 | MtrunA17_Chr6g0473781 | 39.000 | 100 | 54 | 1 | 18 | 117 | 56 | 148 | 2.81e-15 | 72.0 |
Msa0246590 | MtrunA17_Chr6g0473741 | 41.176 | 85 | 50 | 0 | 18 | 102 | 65 | 149 | 3.64e-15 | 71.6 |
Msa0246590 | MtrunA17_Chr7g0257911 | 54.098 | 61 | 28 | 0 | 16 | 76 | 28 | 88 | 3.69e-15 | 72.4 |
Msa0246590 | MtrunA17_Chr1g0184061 | 47.436 | 78 | 37 | 2 | 1 | 74 | 56 | 133 | 3.85e-15 | 71.6 |
Msa0246590 | MtrunA17_Chr1g0203861 | 56.140 | 57 | 25 | 0 | 18 | 74 | 43 | 99 | 5.21e-15 | 70.9 |
Msa0246590 | MtrunA17_Chr5g0396191 | 39.416 | 137 | 71 | 3 | 19 | 151 | 11 | 139 | 5.64e-15 | 70.5 |
Msa0246590 | MtrunA17_Chr5g0437371 | 55.357 | 56 | 25 | 0 | 19 | 74 | 66 | 121 | 5.73e-15 | 72.4 |
Msa0246590 | MtrunA17_Chr2g0297331 | 55.000 | 60 | 26 | 1 | 19 | 77 | 14 | 73 | 5.81e-15 | 68.9 |
Msa0246590 | MtrunA17_Chr2g0283181 | 50.000 | 70 | 30 | 2 | 7 | 75 | 141 | 206 | 6.69e-15 | 72.0 |
Msa0246590 | MtrunA17_Chr8g0387801 | 28.492 | 179 | 102 | 3 | 19 | 188 | 107 | 268 | 6.75e-15 | 72.0 |
Msa0246590 | MtrunA17_Chr7g0252381 | 49.315 | 73 | 31 | 2 | 19 | 89 | 42 | 110 | 7.20e-15 | 71.6 |
Msa0246590 | MtrunA17_Chr6g0473861 | 41.176 | 85 | 50 | 0 | 18 | 102 | 62 | 146 | 9.51e-15 | 71.2 |
Msa0246590 | MtrunA17_Chr1g0196871 | 42.353 | 85 | 42 | 2 | 6 | 83 | 3 | 87 | 1.00e-14 | 67.4 |
Msa0246590 | MtrunA17_Chr5g0437671 | 51.724 | 58 | 28 | 0 | 19 | 76 | 85 | 142 | 1.05e-14 | 72.0 |
Msa0246590 | MtrunA17_Chr7g0250731 | 52.542 | 59 | 27 | 1 | 19 | 76 | 61 | 119 | 1.17e-14 | 70.1 |
Msa0246590 | MtrunA17_Chr7g0250721 | 47.222 | 72 | 33 | 2 | 19 | 89 | 61 | 128 | 1.48e-14 | 69.7 |
Msa0246590 | MtrunA17_Chr5g0396171 | 48.611 | 72 | 33 | 1 | 5 | 76 | 14 | 81 | 1.64e-14 | 66.6 |
Msa0246590 | MtrunA17_Chr6g0473971 | 54.386 | 57 | 26 | 0 | 18 | 74 | 53 | 109 | 1.81e-14 | 70.1 |
Msa0246590 | MtrunA17_Chr7g0261151 | 54.098 | 61 | 25 | 2 | 19 | 77 | 20 | 79 | 1.81e-14 | 67.8 |
Msa0246590 | MtrunA17_Chr7g0261101 | 54.098 | 61 | 25 | 2 | 19 | 77 | 20 | 79 | 2.13e-14 | 67.8 |
Msa0246590 | MtrunA17_Chr6g0473941 | 56.140 | 57 | 25 | 0 | 18 | 74 | 32 | 88 | 2.89e-14 | 68.9 |
Msa0246590 | MtrunA17_Chr7g0250711 | 49.275 | 69 | 29 | 2 | 9 | 76 | 55 | 118 | 3.01e-14 | 68.9 |
Msa0246590 | MtrunA17_Chr4g0026931 | 44.286 | 70 | 38 | 1 | 9 | 77 | 121 | 190 | 5.59e-14 | 69.3 |
Msa0246590 | MtrunA17_Chr6g0473771 | 43.421 | 76 | 38 | 1 | 18 | 93 | 42 | 112 | 6.17e-14 | 65.9 |
Msa0246590 | MtrunA17_Chr2g0286161 | 48.214 | 56 | 29 | 0 | 19 | 74 | 50 | 105 | 6.29e-14 | 69.3 |
Msa0246590 | MtrunA17_Chr1g0184031 | 50.000 | 70 | 34 | 1 | 6 | 74 | 71 | 140 | 6.29e-14 | 68.2 |
Msa0246590 | MtrunA17_Chr3g0126321 | 36.957 | 92 | 56 | 1 | 19 | 110 | 113 | 202 | 7.10e-14 | 69.3 |
Msa0246590 | MtrunA17_Chr6g0473881 | 54.386 | 57 | 26 | 0 | 18 | 74 | 109 | 165 | 7.47e-14 | 68.9 |
Msa0246590 | MtrunA17_Chr5g0424051 | 54.430 | 79 | 32 | 2 | 19 | 93 | 96 | 174 | 8.01e-14 | 68.9 |
Msa0246590 | MtrunA17_Chr1g0184071 | 50.704 | 71 | 30 | 2 | 5 | 74 | 59 | 125 | 8.48e-14 | 67.0 |
Msa0246590 | MtrunA17_Chr4g0055761 | 47.143 | 70 | 36 | 1 | 7 | 75 | 133 | 202 | 8.57e-14 | 68.6 |
Msa0246590 | MtrunA17_Chr5g0398081 | 33.333 | 132 | 81 | 2 | 18 | 142 | 48 | 179 | 9.93e-14 | 67.8 |
Msa0246590 | MtrunA17_Chr1g0186681 | 41.026 | 78 | 44 | 1 | 1 | 76 | 1 | 78 | 1.11e-13 | 65.5 |
Msa0246590 | MtrunA17_Chr4g0066931 | 42.857 | 63 | 36 | 0 | 12 | 74 | 46 | 108 | 1.13e-13 | 68.9 |
Msa0246590 | MtrunA17_Chr5g0398091 | 41.573 | 89 | 46 | 1 | 18 | 100 | 53 | 141 | 1.24e-13 | 67.4 |
Msa0246590 | MtrunA17_Chr1g0184011 | 56.364 | 55 | 23 | 1 | 21 | 74 | 86 | 140 | 1.57e-13 | 67.0 |
Msa0246590 | MtrunA17_Chr5g0396741 | 57.746 | 71 | 28 | 1 | 18 | 86 | 116 | 186 | 1.63e-13 | 68.2 |
Msa0246590 | MtrunA17_Chr5g0398061 | 42.353 | 85 | 43 | 1 | 18 | 96 | 48 | 132 | 1.77e-13 | 67.0 |
Msa0246590 | MtrunA17_Chr1g0149331 | 47.222 | 72 | 38 | 0 | 19 | 90 | 7 | 78 | 2.10e-13 | 66.2 |
Msa0246590 | MtrunA17_Chr4g0026881 | 44.615 | 65 | 35 | 1 | 14 | 77 | 92 | 156 | 2.15e-13 | 67.0 |
Msa0246590 | MtrunA17_Chr4g0062551 | 43.284 | 67 | 38 | 0 | 10 | 76 | 44 | 110 | 2.35e-13 | 65.1 |
Msa0246590 | MtrunA17_Chr5g0432821 | 49.123 | 57 | 29 | 0 | 19 | 75 | 124 | 180 | 2.68e-13 | 67.4 |
Msa0246590 | MtrunA17_Chr7g0261181 | 58.333 | 60 | 24 | 1 | 19 | 77 | 13 | 72 | 4.05e-13 | 63.9 |
Msa0246590 | MtrunA17_Chr1g0200931 | 42.667 | 75 | 40 | 2 | 1 | 74 | 7 | 79 | 4.29e-13 | 64.3 |
Msa0246590 | MtrunA17_Chr1g0183961 | 56.250 | 64 | 27 | 1 | 15 | 77 | 23 | 86 | 4.63e-13 | 64.3 |
Msa0246590 | MtrunA17_Chr4g0062161 | 43.284 | 67 | 38 | 0 | 10 | 76 | 44 | 110 | 5.13e-13 | 65.5 |
Msa0246590 | MtrunA17_Chr5g0396911 | 39.560 | 91 | 43 | 1 | 19 | 109 | 112 | 190 | 7.02e-13 | 66.2 |
Msa0246590 | MtrunA17_Chr4g0057241 | 42.105 | 76 | 43 | 1 | 19 | 94 | 15 | 89 | 1.78e-12 | 63.2 |
Msa0246590 | MtrunA17_Chr1g0209891 | 49.153 | 59 | 30 | 0 | 2 | 60 | 37 | 95 | 2.34e-12 | 64.7 |
Msa0246590 | MtrunA17_Chr1g0205961 | 47.458 | 59 | 31 | 0 | 2 | 60 | 98 | 156 | 2.51e-12 | 65.1 |
Msa0246590 | MtrunA17_Chr3g0137831 | 54.386 | 57 | 26 | 0 | 19 | 75 | 8 | 64 | 5.71e-12 | 62.8 |
Msa0246590 | MtrunA17_Chr8g0345531 | 53.846 | 52 | 24 | 0 | 9 | 60 | 106 | 157 | 6.78e-12 | 63.9 |
Msa0246590 | MtrunA17_Chr8g0378811 | 46.667 | 60 | 32 | 0 | 15 | 74 | 51 | 110 | 1.09e-11 | 62.8 |
Msa0246590 | MtrunA17_Chr1g0189941 | 46.429 | 56 | 30 | 0 | 19 | 74 | 24 | 79 | 1.14e-11 | 60.8 |
Msa0246590 | MtrunA17_Chr7g0217991 | 42.647 | 68 | 39 | 0 | 7 | 74 | 30 | 97 | 1.35e-11 | 63.2 |
Msa0246590 | MtrunA17_Chr1g0170471 | 43.243 | 74 | 35 | 3 | 27 | 93 | 91 | 164 | 1.38e-11 | 60.8 |
Msa0246590 | MtrunA17_Chr1g0167781 | 48.718 | 78 | 35 | 3 | 1 | 74 | 62 | 138 | 2.08e-11 | 61.2 |
Msa0246590 | MtrunA17_Chr4g0042761 | 36.752 | 117 | 58 | 3 | 13 | 113 | 42 | 158 | 2.20e-11 | 62.0 |
Msa0246590 | MtrunA17_Chr8g0350701 | 44.118 | 68 | 33 | 1 | 7 | 74 | 20 | 82 | 2.74e-11 | 61.6 |
Msa0246590 | MtrunA17_Chr6g0473791 | 50.980 | 51 | 25 | 0 | 18 | 68 | 56 | 106 | 3.18e-11 | 59.3 |
Msa0246590 | MtrunA17_Chr7g0253424 | 42.623 | 61 | 35 | 0 | 14 | 74 | 34 | 94 | 3.52e-11 | 61.2 |
Msa0246590 | MtrunA17_Chr1g0186741 | 52.941 | 68 | 27 | 2 | 9 | 75 | 67 | 130 | 3.84e-11 | 60.5 |
Msa0246590 | MtrunA17_Chr6g0461271 | 48.214 | 56 | 29 | 0 | 19 | 74 | 33 | 88 | 4.03e-11 | 61.2 |
Msa0246590 | MtrunA17_Chr1g0155751 | 50.746 | 67 | 31 | 1 | 16 | 80 | 36 | 102 | 4.30e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0246590 | AT1G19210.1 | 49.275 | 207 | 68 | 6 | 17 | 217 | 10 | 185 | 5.77e-54 | 171 |
Msa0246590 | AT1G74930.1 | 46.818 | 220 | 89 | 6 | 1 | 217 | 1 | 195 | 6.14e-49 | 159 |
Msa0246590 | AT5G21960.1 | 75.294 | 85 | 21 | 0 | 16 | 100 | 4 | 88 | 1.64e-42 | 143 |
Msa0246590 | AT4G31060.1 | 54.444 | 90 | 38 | 2 | 19 | 105 | 27 | 116 | 2.10e-28 | 105 |
Msa0246590 | AT1G21910.1 | 48.352 | 91 | 40 | 1 | 19 | 102 | 50 | 140 | 4.70e-23 | 93.2 |
Msa0246590 | AT2G22200.1 | 60.294 | 68 | 26 | 1 | 9 | 76 | 62 | 128 | 5.22e-23 | 94.0 |
Msa0246590 | AT5G25810.1 | 45.263 | 95 | 52 | 0 | 7 | 101 | 24 | 118 | 2.70e-22 | 90.9 |
Msa0246590 | AT4G13620.1 | 40.952 | 105 | 56 | 1 | 2 | 106 | 215 | 313 | 3.39e-22 | 93.6 |
Msa0246590 | AT1G01250.1 | 51.316 | 76 | 37 | 0 | 18 | 93 | 44 | 119 | 4.03e-22 | 89.7 |
Msa0246590 | AT4G06746.1 | 42.276 | 123 | 63 | 2 | 1 | 118 | 18 | 137 | 5.63e-22 | 88.2 |
Msa0246590 | AT5G67190.1 | 47.368 | 95 | 45 | 2 | 4 | 98 | 7 | 96 | 2.24e-21 | 87.8 |
Msa0246590 | AT2G23340.1 | 60.000 | 65 | 26 | 0 | 11 | 75 | 20 | 84 | 2.35e-21 | 87.4 |
Msa0246590 | AT1G46768.3 | 62.069 | 58 | 22 | 0 | 19 | 76 | 31 | 88 | 2.58e-21 | 86.3 |
Msa0246590 | AT1G71520.1 | 46.154 | 91 | 44 | 2 | 11 | 97 | 6 | 95 | 2.90e-21 | 86.3 |
Msa0246590 | AT1G46768.1 | 62.069 | 58 | 22 | 0 | 19 | 76 | 31 | 88 | 3.02e-21 | 86.7 |
Msa0246590 | AT1G46768.2 | 62.069 | 58 | 22 | 0 | 19 | 76 | 31 | 88 | 3.02e-21 | 86.7 |
Msa0246590 | AT4G32800.1 | 42.000 | 100 | 58 | 0 | 1 | 100 | 1 | 100 | 3.40e-21 | 88.2 |
Msa0246590 | AT4G36900.1 | 64.912 | 57 | 20 | 0 | 19 | 75 | 30 | 86 | 3.98e-21 | 87.4 |
Msa0246590 | AT4G39780.1 | 54.412 | 68 | 31 | 0 | 9 | 76 | 83 | 150 | 5.44e-21 | 88.6 |
Msa0246590 | AT1G22190.1 | 55.224 | 67 | 30 | 0 | 10 | 76 | 74 | 140 | 5.58e-21 | 88.2 |
Msa0246590 | AT1G36060.1 | 63.793 | 58 | 21 | 0 | 18 | 75 | 142 | 199 | 6.06e-21 | 89.4 |
Msa0246590 | AT1G78080.1 | 60.656 | 61 | 24 | 0 | 16 | 76 | 149 | 209 | 6.10e-21 | 89.4 |
Msa0246590 | AT1G71450.1 | 62.712 | 59 | 22 | 0 | 17 | 75 | 22 | 80 | 2.81e-20 | 84.7 |
Msa0246590 | AT5G11590.1 | 44.898 | 98 | 51 | 1 | 7 | 101 | 36 | 133 | 4.17e-20 | 85.5 |
Msa0246590 | AT3G50260.1 | 59.016 | 61 | 25 | 0 | 19 | 79 | 21 | 81 | 6.64e-20 | 82.8 |
Msa0246590 | AT4G28140.1 | 60.000 | 60 | 24 | 0 | 16 | 75 | 140 | 199 | 8.57e-20 | 85.9 |
Msa0246590 | AT2G44940.1 | 50.633 | 79 | 39 | 0 | 19 | 97 | 100 | 178 | 1.16e-19 | 85.5 |
Msa0246590 | AT5G65130.2 | 55.932 | 59 | 26 | 0 | 18 | 76 | 112 | 170 | 2.20e-19 | 84.3 |
Msa0246590 | AT5G65130.1 | 55.932 | 59 | 26 | 0 | 18 | 76 | 110 | 168 | 2.30e-19 | 84.3 |
Msa0246590 | AT2G20880.1 | 55.224 | 67 | 30 | 0 | 9 | 75 | 177 | 243 | 2.47e-19 | 85.1 |
Msa0246590 | AT1G22810.1 | 48.235 | 85 | 37 | 3 | 17 | 97 | 12 | 93 | 5.38e-19 | 80.5 |
Msa0246590 | AT5G51190.1 | 54.412 | 68 | 30 | 1 | 9 | 75 | 62 | 129 | 6.78e-19 | 82.0 |
Msa0246590 | AT5G47230.1 | 54.667 | 75 | 32 | 2 | 2 | 75 | 140 | 213 | 7.56e-19 | 83.2 |
Msa0246590 | AT2G35700.1 | 48.000 | 75 | 39 | 0 | 19 | 93 | 45 | 119 | 1.81e-18 | 80.1 |
Msa0246590 | AT2G47520.1 | 50.769 | 65 | 32 | 0 | 12 | 76 | 43 | 107 | 2.40e-18 | 79.3 |
Msa0246590 | AT3G16280.1 | 48.684 | 76 | 39 | 0 | 18 | 93 | 60 | 135 | 3.22e-18 | 80.5 |
Msa0246590 | AT4G25470.1 | 48.193 | 83 | 43 | 0 | 18 | 100 | 50 | 132 | 3.42e-18 | 80.1 |
Msa0246590 | AT1G03800.1 | 53.125 | 64 | 30 | 0 | 12 | 75 | 46 | 109 | 3.44e-18 | 80.5 |
Msa0246590 | AT1G77640.1 | 48.039 | 102 | 47 | 1 | 19 | 114 | 43 | 144 | 3.45e-18 | 80.5 |
Msa0246590 | AT3G15210.1 | 58.621 | 58 | 24 | 0 | 19 | 76 | 25 | 82 | 3.48e-18 | 80.1 |
Msa0246590 | AT3G16280.2 | 48.052 | 77 | 40 | 0 | 18 | 94 | 78 | 154 | 5.11e-18 | 80.1 |
Msa0246590 | AT2G33710.2 | 59.649 | 57 | 23 | 0 | 19 | 75 | 70 | 126 | 5.27e-18 | 79.7 |
Msa0246590 | AT5G51990.1 | 30.000 | 200 | 110 | 4 | 18 | 217 | 53 | 222 | 5.45e-18 | 79.7 |
Msa0246590 | AT2G33710.1 | 59.649 | 57 | 23 | 0 | 19 | 75 | 70 | 126 | 6.08e-18 | 79.3 |
Msa0246590 | AT5G44210.1 | 56.061 | 66 | 28 | 1 | 10 | 75 | 25 | 89 | 8.07e-18 | 78.6 |
Msa0246590 | AT5G25390.2 | 55.000 | 60 | 27 | 0 | 16 | 75 | 4 | 63 | 9.93e-18 | 78.2 |
Msa0246590 | AT1G33760.1 | 39.264 | 163 | 83 | 4 | 19 | 181 | 20 | 166 | 1.06e-17 | 77.8 |
Msa0246590 | AT5G61600.1 | 61.667 | 60 | 22 | 1 | 19 | 77 | 88 | 147 | 1.14e-17 | 79.0 |
Msa0246590 | AT4G16750.1 | 46.667 | 75 | 40 | 0 | 19 | 93 | 40 | 114 | 1.39e-17 | 77.4 |
Msa0246590 | AT3G16770.1 | 45.946 | 74 | 40 | 0 | 3 | 76 | 63 | 136 | 1.50e-17 | 79.0 |
Msa0246590 | AT3G60490.1 | 45.055 | 91 | 47 | 1 | 3 | 93 | 58 | 145 | 1.66e-17 | 79.0 |
Msa0246590 | AT2G25820.1 | 47.368 | 76 | 40 | 0 | 18 | 93 | 25 | 100 | 3.01e-17 | 77.8 |
Msa0246590 | AT1G50640.1 | 59.322 | 59 | 24 | 0 | 19 | 77 | 28 | 86 | 3.20e-17 | 77.4 |
Msa0246590 | AT4G11140.1 | 31.548 | 168 | 101 | 4 | 19 | 186 | 87 | 240 | 4.18e-17 | 78.2 |
Msa0246590 | AT1G72360.1 | 39.024 | 82 | 50 | 0 | 12 | 93 | 18 | 99 | 4.33e-17 | 77.0 |
Msa0246590 | AT4G27950.1 | 48.052 | 77 | 40 | 0 | 2 | 78 | 101 | 177 | 4.49e-17 | 79.0 |
Msa0246590 | AT5G13330.1 | 45.205 | 73 | 40 | 0 | 3 | 75 | 23 | 95 | 5.42e-17 | 76.6 |
Msa0246590 | AT5G43410.1 | 49.231 | 65 | 32 | 1 | 14 | 77 | 10 | 74 | 6.50e-17 | 74.3 |
Msa0246590 | AT1G15360.1 | 54.386 | 57 | 26 | 0 | 19 | 75 | 7 | 63 | 7.93e-17 | 75.9 |
Msa0246590 | AT1G15360.2 | 54.386 | 57 | 26 | 0 | 19 | 75 | 7 | 63 | 7.93e-17 | 75.9 |
Msa0246590 | AT1G72360.3 | 39.024 | 82 | 50 | 0 | 12 | 93 | 67 | 148 | 8.33e-17 | 77.0 |
Msa0246590 | AT1G72360.2 | 39.024 | 82 | 50 | 0 | 12 | 93 | 69 | 150 | 9.19e-17 | 77.0 |
Msa0246590 | AT3G20310.1 | 59.322 | 59 | 24 | 0 | 19 | 77 | 27 | 85 | 1.07e-16 | 76.6 |
Msa0246590 | AT1G28370.1 | 50.769 | 65 | 32 | 0 | 11 | 75 | 12 | 76 | 1.49e-16 | 74.3 |
Msa0246590 | AT1G28360.1 | 56.897 | 58 | 25 | 0 | 19 | 76 | 12 | 69 | 1.77e-16 | 74.7 |
Msa0246590 | AT4G25490.1 | 47.368 | 76 | 40 | 0 | 18 | 93 | 47 | 122 | 2.04e-16 | 75.1 |
Msa0246590 | AT5G25190.1 | 52.381 | 63 | 30 | 0 | 19 | 81 | 8 | 70 | 2.53e-16 | 74.3 |
Msa0246590 | AT4G25480.1 | 46.053 | 76 | 41 | 0 | 18 | 93 | 50 | 125 | 2.62e-16 | 75.1 |
Msa0246590 | AT1G28370.2 | 56.140 | 57 | 25 | 0 | 19 | 75 | 58 | 114 | 3.01e-16 | 74.7 |
Msa0246590 | AT3G57600.1 | 35.652 | 115 | 70 | 1 | 19 | 129 | 28 | 142 | 3.55e-16 | 75.5 |
Msa0246590 | AT2G44840.1 | 57.627 | 59 | 24 | 1 | 19 | 76 | 92 | 150 | 4.70e-16 | 74.3 |
Msa0246590 | AT2G36450.1 | 49.333 | 75 | 37 | 1 | 18 | 91 | 14 | 88 | 6.56e-16 | 73.2 |
Msa0246590 | AT5G07580.1 | 44.681 | 94 | 43 | 3 | 12 | 98 | 103 | 194 | 6.59e-16 | 73.6 |
Msa0246590 | AT3G23230.1 | 55.000 | 60 | 26 | 1 | 19 | 77 | 20 | 79 | 9.45e-16 | 71.6 |
Msa0246590 | AT1G63030.2 | 33.113 | 151 | 90 | 3 | 18 | 160 | 29 | 176 | 1.08e-15 | 72.4 |
Msa0246590 | AT1G63030.1 | 33.113 | 151 | 90 | 3 | 18 | 160 | 29 | 176 | 1.08e-15 | 72.4 |
Msa0246590 | AT1G12980.1 | 52.459 | 61 | 29 | 0 | 14 | 74 | 52 | 112 | 1.24e-15 | 74.7 |
Msa0246590 | AT5G61890.1 | 54.386 | 57 | 26 | 0 | 19 | 75 | 90 | 146 | 1.78e-15 | 73.2 |
Msa0246590 | AT4G17490.1 | 47.297 | 74 | 38 | 1 | 3 | 75 | 121 | 194 | 2.20e-15 | 73.6 |
Msa0246590 | AT2G46310.1 | 50.000 | 62 | 31 | 0 | 19 | 80 | 99 | 160 | 3.55e-15 | 73.2 |
Msa0246590 | AT3G61630.1 | 55.000 | 60 | 27 | 0 | 19 | 78 | 105 | 164 | 4.39e-15 | 73.2 |
Msa0246590 | AT1G24590.1 | 55.357 | 56 | 25 | 0 | 19 | 74 | 58 | 113 | 6.30e-15 | 72.4 |
Msa0246590 | AT5G25390.1 | 53.333 | 60 | 25 | 1 | 16 | 75 | 4 | 60 | 7.81e-15 | 70.5 |
Msa0246590 | AT3G11020.1 | 40.698 | 86 | 46 | 1 | 19 | 104 | 78 | 158 | 1.06e-14 | 72.0 |
Msa0246590 | AT5G18560.1 | 39.437 | 71 | 43 | 0 | 11 | 81 | 47 | 117 | 1.25e-14 | 72.0 |
Msa0246590 | AT1G12610.1 | 42.169 | 83 | 48 | 0 | 18 | 100 | 29 | 111 | 1.32e-14 | 70.1 |
Msa0246590 | AT5G47220.1 | 50.725 | 69 | 32 | 2 | 9 | 75 | 106 | 174 | 1.87e-14 | 70.5 |
Msa0246590 | AT4G23750.2 | 46.667 | 75 | 40 | 0 | 4 | 78 | 107 | 181 | 2.23e-14 | 71.2 |
Msa0246590 | AT4G23750.1 | 46.667 | 75 | 40 | 0 | 4 | 78 | 107 | 181 | 2.23e-14 | 71.2 |
Msa0246590 | AT3G23240.1 | 49.275 | 69 | 32 | 2 | 8 | 74 | 71 | 138 | 2.56e-14 | 69.7 |
Msa0246590 | AT1G28160.1 | 51.786 | 56 | 27 | 0 | 19 | 74 | 39 | 94 | 4.57e-14 | 69.3 |
Msa0246590 | AT5G13910.1 | 50.000 | 56 | 28 | 0 | 19 | 74 | 20 | 75 | 4.64e-14 | 68.9 |
Msa0246590 | AT1G75490.1 | 50.000 | 60 | 30 | 0 | 16 | 75 | 39 | 98 | 4.84e-14 | 68.6 |
Msa0246590 | AT1G64380.1 | 60.294 | 68 | 25 | 1 | 18 | 83 | 135 | 202 | 6.15e-14 | 70.1 |
Msa0246590 | AT5G53290.1 | 53.571 | 56 | 26 | 0 | 19 | 74 | 125 | 180 | 7.37e-14 | 69.7 |
Msa0246590 | AT4G17500.1 | 55.172 | 58 | 25 | 1 | 19 | 75 | 148 | 205 | 7.71e-14 | 68.9 |
Msa0246590 | AT2G31230.1 | 55.932 | 59 | 23 | 2 | 19 | 75 | 86 | 143 | 1.17e-13 | 68.2 |
Msa0246590 | AT2G40340.2 | 49.123 | 57 | 29 | 0 | 19 | 75 | 14 | 70 | 1.36e-13 | 68.6 |
Msa0246590 | AT2G40340.5 | 49.123 | 57 | 29 | 0 | 19 | 75 | 14 | 70 | 1.36e-13 | 68.6 |
Msa0246590 | AT2G40340.4 | 49.123 | 57 | 29 | 0 | 19 | 75 | 14 | 70 | 1.36e-13 | 68.6 |
Msa0246590 | AT1G12890.1 | 43.421 | 76 | 41 | 1 | 1 | 74 | 1 | 76 | 1.49e-13 | 67.4 |
Msa0246590 | AT5G19790.1 | 41.250 | 80 | 45 | 1 | 3 | 80 | 4 | 83 | 1.92e-13 | 67.8 |
Msa0246590 | AT5G05410.2 | 50.877 | 57 | 28 | 0 | 19 | 75 | 79 | 135 | 2.78e-13 | 67.8 |
Msa0246590 | AT5G05410.1 | 50.877 | 57 | 28 | 0 | 19 | 75 | 79 | 135 | 3.05e-13 | 67.8 |
Msa0246590 | AT2G40340.3 | 49.123 | 57 | 29 | 0 | 19 | 75 | 72 | 128 | 3.59e-13 | 67.4 |
Msa0246590 | AT1G44830.1 | 65.517 | 58 | 19 | 1 | 19 | 75 | 35 | 92 | 3.61e-13 | 66.2 |
Msa0246590 | AT2G40340.1 | 49.123 | 57 | 29 | 0 | 19 | 75 | 72 | 128 | 3.88e-13 | 67.8 |
Msa0246590 | AT2G40340.6 | 49.123 | 57 | 29 | 0 | 19 | 75 | 79 | 135 | 4.33e-13 | 67.8 |
Msa0246590 | AT1G77200.1 | 48.000 | 75 | 39 | 0 | 19 | 93 | 43 | 117 | 6.68e-13 | 66.2 |
Msa0246590 | AT5G11190.1 | 54.386 | 57 | 26 | 0 | 19 | 75 | 7 | 63 | 2.00e-12 | 63.9 |
Msa0246590 | AT5G50080.2 | 52.174 | 69 | 33 | 0 | 9 | 77 | 76 | 144 | 2.01e-12 | 64.7 |
Msa0246590 | AT5G50080.1 | 52.174 | 69 | 33 | 0 | 9 | 77 | 67 | 135 | 2.25e-12 | 64.3 |
Msa0246590 | AT5G18450.1 | 47.458 | 59 | 31 | 0 | 16 | 74 | 31 | 89 | 6.60e-12 | 63.9 |
Msa0246590 | AT5G07310.1 | 54.386 | 57 | 26 | 0 | 19 | 75 | 92 | 148 | 8.08e-12 | 63.2 |
Msa0246590 | AT1G43160.1 | 57.627 | 59 | 25 | 0 | 19 | 77 | 61 | 119 | 1.72e-11 | 61.2 |
Msa0246590 | AT5G64750.1 | 52.830 | 53 | 25 | 0 | 25 | 77 | 191 | 243 | 2.12e-11 | 62.8 |
Msa0246590 | AT4G34410.1 | 56.140 | 57 | 25 | 0 | 19 | 75 | 136 | 192 | 2.76e-11 | 62.0 |
Msa0246590 | AT1G06160.1 | 57.377 | 61 | 23 | 2 | 19 | 77 | 82 | 141 | 3.14e-11 | 61.6 |
Msa0246590 | AT2G40350.2 | 45.000 | 60 | 33 | 0 | 19 | 78 | 74 | 133 | 4.71e-11 | 59.7 |
Msa0246590 | AT2G40350.1 | 45.000 | 60 | 33 | 0 | 19 | 78 | 67 | 126 | 5.52e-11 | 59.3 |
Msa0246590 | AT1G04370.1 | 49.231 | 65 | 32 | 1 | 14 | 77 | 15 | 79 | 5.98e-11 | 58.5 |
Msa0246590 | AT3G23220.1 | 47.297 | 74 | 36 | 2 | 6 | 77 | 1 | 73 | 8.38e-11 | 58.5 |
Msa0246590 | AT1G53170.1 | 52.174 | 69 | 30 | 1 | 9 | 74 | 18 | 86 | 9.02e-11 | 59.3 |
Find 64 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTCTCCATAATCATAAAT+TGG | 0.265668 | 2_2:+27940092 | None:intergenic |
GATATGCCAATTTATGATTA+TGG | 0.268170 | 2_2:-27940098 | Msa0246590:CDS |
GCAATGTTTGGTGGATCATT+AGG | 0.270307 | 2_2:+27940452 | None:intergenic |
TCCGATTTGTTAGCGGGAAA+TGG | 0.305277 | 2_2:-27940203 | Msa0246590:CDS |
CAAACAGCCGCCAAAGAATA+TGG | 0.317582 | 2_2:-27940565 | Msa0246590:CDS |
AAGAACCTAACCATATTCTT+TGG | 0.340126 | 2_2:+27940555 | None:intergenic |
GTCGACCCGGATTCTCATTC+TGG | 0.360845 | 2_2:+27940363 | None:intergenic |
CATATTCTTTGGCGGCTGTT+TGG | 0.364638 | 2_2:+27940566 | None:intergenic |
CCGATTTGTTAGCGGGAAAT+GGG | 0.376647 | 2_2:-27940202 | Msa0246590:CDS |
CAATGTTTGGTGGATCATTA+GGG | 0.378711 | 2_2:+27940453 | None:intergenic |
CCCATTTCCCGCTAACAAAT+CGG | 0.384159 | 2_2:+27940202 | None:intergenic |
ATACTCCACAACGACATTAT+CGG | 0.393238 | 2_2:+27940340 | None:intergenic |
TTGTTAGCGGGAAATGGGTC+GGG | 0.399742 | 2_2:-27940197 | Msa0246590:CDS |
GATCTTCCACCAGCAATGTT+TGG | 0.400287 | 2_2:+27940440 | None:intergenic |
TAATCATAAATTGGCATATC+CGG | 0.408003 | 2_2:+27940101 | None:intergenic |
TGATTATGGAGAAGAGAACT+TGG | 0.429098 | 2_2:-27940084 | Msa0246590:CDS |
TACTCCACAACGACATTATC+GGG | 0.440838 | 2_2:+27940341 | None:intergenic |
AATGATCCACCAAACATTGC+TGG | 0.442376 | 2_2:-27940449 | Msa0246590:CDS |
ATCGGAGGGGACTGCATTGT+TGG | 0.452312 | 2_2:-27940309 | Msa0246590:CDS |
GGGTATCCAGAATGAGAATC+CGG | 0.454589 | 2_2:-27940369 | Msa0246590:CDS |
GTGGAGTACGGAAGAGGAAG+TGG | 0.457959 | 2_2:-27940616 | Msa0246590:CDS |
TATGGAGAAGAGAACTTGGA+TGG | 0.471055 | 2_2:-27940080 | Msa0246590:CDS |
GAAATTTGAACCGGATTACT+CGG | 0.472638 | 2_2:-27940174 | Msa0246590:CDS |
AGAGAACTTGGATGGGTTGG+TGG | 0.486151 | 2_2:-27940072 | Msa0246590:CDS |
TTCTTACGACTCGGCGGAGA+AGG | 0.487344 | 2_2:-27940537 | Msa0246590:CDS |
ATTGTGATTCAAAGCAAAAC+GGG | 0.491555 | 2_2:-27940232 | Msa0246590:CDS |
GATACCCGAATTAGCAAAAC+GGG | 0.495746 | 2_2:+27940385 | None:intergenic |
GGGGACTGCATTGTTGGCTA+TGG | 0.500549 | 2_2:-27940303 | Msa0246590:CDS |
GAATCACTTCGTTCTGTCGT+AGG | 0.501571 | 2_2:+27940650 | None:intergenic |
AACCTAACCATATTCTTTGG+CGG | 0.508177 | 2_2:+27940558 | None:intergenic |
AGAAGAGAACTTGGATGGGT+TGG | 0.508780 | 2_2:-27940075 | Msa0246590:CDS |
GATTGTGATTCAAAGCAAAA+CGG | 0.513433 | 2_2:-27940233 | Msa0246590:CDS |
ATGGAGAAGAGAACTTGGAT+GGG | 0.518079 | 2_2:-27940079 | Msa0246590:CDS |
TGGGTCGGGGAAATTTGAAC+CGG | 0.524862 | 2_2:-27940183 | Msa0246590:CDS |
TGTTAGCGGGAAATGGGTCG+GGG | 0.535319 | 2_2:-27940196 | Msa0246590:CDS |
CATCATTGTACCGTGGAGTA+CGG | 0.535579 | 2_2:-27940628 | Msa0246590:CDS |
CTTCCACCAGCAATGTTTGG+TGG | 0.540238 | 2_2:+27940443 | None:intergenic |
GGAATCTGAAGCATTGTCTC+CGG | 0.542057 | 2_2:-27940282 | Msa0246590:CDS |
TTTGTTAGCGGGAAATGGGT+CGG | 0.542639 | 2_2:-27940198 | Msa0246590:CDS |
TGGAGTACGGAAGAGGAAGT+GGG | 0.564589 | 2_2:-27940615 | Msa0246590:CDS |
AGCCGCCAAAGAATATGGTT+AGG | 0.567194 | 2_2:-27940560 | Msa0246590:CDS |
GAGTATGAGTCGTCATCGGA+GGG | 0.568911 | 2_2:-27940323 | Msa0246590:CDS |
GGATACCCGAATTAGCAAAA+CGG | 0.569951 | 2_2:+27940384 | None:intergenic |
TTACGACTCGGCGGAGAAGG+CGG | 0.571946 | 2_2:-27940534 | Msa0246590:CDS |
ACGACATTATCGGGTCGACC+CGG | 0.576844 | 2_2:+27940350 | None:intergenic |
TGTACCGTGGAGTACGGAAG+AGG | 0.578367 | 2_2:-27940622 | Msa0246590:CDS |
GCAGCAGCTTGAATCTCAGA+AGG | 0.595007 | 2_2:+27940410 | None:intergenic |
AAACATGGTGAAGTCGAATG+TGG | 0.607906 | 2_2:-27940678 | None:intergenic |
ACTGTTGCATCTGACATAGC+CGG | 0.609538 | 2_2:+27940263 | None:intergenic |
ACTTCCTCTTCCGTACTCCA+CGG | 0.609797 | 2_2:+27940618 | None:intergenic |
CTTGACTGACTTCTATGTGC+CGG | 0.613105 | 2_2:-27940120 | Msa0246590:CDS |
GGTATCCAGAATGAGAATCC+GGG | 0.619684 | 2_2:-27940368 | Msa0246590:CDS |
CCACCAAAATCATCAAAACC+CGG | 0.619904 | 2_2:+27940146 | None:intergenic |
GGAGTACGGAAGAGGAAGTG+GGG | 0.621757 | 2_2:-27940614 | Msa0246590:CDS |
TGTGGAGTATGAGTCGTCAT+CGG | 0.626052 | 2_2:-27940327 | Msa0246590:CDS |
ATGGTTAGGTTCTTACGACT+CGG | 0.627208 | 2_2:-27940546 | Msa0246590:CDS |
GGAGTATGAGTCGTCATCGG+AGG | 0.629298 | 2_2:-27940324 | Msa0246590:CDS |
GATCCACCAAACATTGCTGG+TGG | 0.629430 | 2_2:-27940446 | Msa0246590:CDS |
GGCGGCGCGTGCTTTCGACG+CGG | 0.640878 | 2_2:-27940516 | Msa0246590:CDS |
TCGACCCGATAATGTCGTTG+TGG | 0.648101 | 2_2:-27940345 | Msa0246590:CDS |
GAGTACGGAAGAGGAAGTGG+GGG | 0.665765 | 2_2:-27940613 | Msa0246590:CDS |
AGTATGAGTCGTCATCGGAG+GGG | 0.677897 | 2_2:-27940322 | Msa0246590:CDS |
AGTGATTCATCATTGTACCG+TGG | 0.731218 | 2_2:-27940635 | Msa0246590:CDS |
GTTAGGTTCTTACGACTCGG+CGG | 0.739226 | 2_2:-27940543 | Msa0246590:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TAATCATAAATTGGCATATC+CGG | + | chr2_2:27940619-27940638 | None:intergenic | 25.0% |
! | GATATGCCAATTTATGATTA+TGG | - | chr2_2:27940619-27940638 | Msa0246590:CDS | 25.0% |
! | TCTTCTCCATAATCATAAAT+TGG | + | chr2_2:27940628-27940647 | None:intergenic | 25.0% |
AAGAACCTAACCATATTCTT+TGG | + | chr2_2:27940165-27940184 | None:intergenic | 30.0% | |
GATTGTGATTCAAAGCAAAA+CGG | - | chr2_2:27940484-27940503 | Msa0246590:CDS | 30.0% | |
ATTGTGATTCAAAGCAAAAC+GGG | - | chr2_2:27940485-27940504 | Msa0246590:CDS | 30.0% | |
!!! | GTTTTTTTCCGATTTGTTAG+CGG | - | chr2_2:27940507-27940526 | Msa0246590:CDS | 30.0% |
!!! | TTTTTTTCCGATTTGTTAGC+GGG | - | chr2_2:27940508-27940527 | Msa0246590:CDS | 30.0% |
AACCTAACCATATTCTTTGG+CGG | + | chr2_2:27940162-27940181 | None:intergenic | 35.0% | |
! | CAATGTTTGGTGGATCATTA+GGG | + | chr2_2:27940267-27940286 | None:intergenic | 35.0% |
ATACTCCACAACGACATTAT+CGG | + | chr2_2:27940380-27940399 | None:intergenic | 35.0% | |
GAAATTTGAACCGGATTACT+CGG | - | chr2_2:27940543-27940562 | Msa0246590:CDS | 35.0% | |
!! | TTTCCGGGTTTTGATGATTT+TGG | - | chr2_2:27940568-27940587 | Msa0246590:CDS | 35.0% |
TGATTATGGAGAAGAGAACT+TGG | - | chr2_2:27940633-27940652 | Msa0246590:CDS | 35.0% | |
!! | TGGTTCATGATTCGTTTTTG+TGG | - | chr2_2:27940665-27940684 | Msa0246590:CDS | 35.0% |
AGTGATTCATCATTGTACCG+TGG | - | chr2_2:27940082-27940101 | Msa0246590:CDS | 40.0% | |
ATGGTTAGGTTCTTACGACT+CGG | - | chr2_2:27940171-27940190 | Msa0246590:CDS | 40.0% | |
! | GCAATGTTTGGTGGATCATT+AGG | + | chr2_2:27940268-27940287 | None:intergenic | 40.0% |
AATGATCCACCAAACATTGC+TGG | - | chr2_2:27940268-27940287 | Msa0246590:CDS | 40.0% | |
GATACCCGAATTAGCAAAAC+GGG | + | chr2_2:27940335-27940354 | None:intergenic | 40.0% | |
GGATACCCGAATTAGCAAAA+CGG | + | chr2_2:27940336-27940355 | None:intergenic | 40.0% | |
TACTCCACAACGACATTATC+GGG | + | chr2_2:27940379-27940398 | None:intergenic | 40.0% | |
CCACCAAAATCATCAAAACC+CGG | + | chr2_2:27940574-27940593 | None:intergenic | 40.0% | |
TATGGAGAAGAGAACTTGGA+TGG | - | chr2_2:27940637-27940656 | Msa0246590:CDS | 40.0% | |
ATGGAGAAGAGAACTTGGAT+GGG | - | chr2_2:27940638-27940657 | Msa0246590:CDS | 40.0% | |
GAATCACTTCGTTCTGTCGT+AGG | + | chr2_2:27940070-27940089 | None:intergenic | 45.0% | |
CATCATTGTACCGTGGAGTA+CGG | - | chr2_2:27940089-27940108 | Msa0246590:CDS | 45.0% | |
CATATTCTTTGGCGGCTGTT+TGG | + | chr2_2:27940154-27940173 | None:intergenic | 45.0% | |
CAAACAGCCGCCAAAGAATA+TGG | - | chr2_2:27940152-27940171 | Msa0246590:CDS | 45.0% | |
AGCCGCCAAAGAATATGGTT+AGG | - | chr2_2:27940157-27940176 | Msa0246590:CDS | 45.0% | |
! | ATGTTTTGCTTACGTGGCAG+TGG | - | chr2_2:27940226-27940245 | Msa0246590:CDS | 45.0% |
GATCTTCCACCAGCAATGTT+TGG | + | chr2_2:27940280-27940299 | None:intergenic | 45.0% | |
! | TGCAGCCCGTTTTGCTAATT+CGG | - | chr2_2:27940327-27940346 | Msa0246590:CDS | 45.0% |
GGGTATCCAGAATGAGAATC+CGG | - | chr2_2:27940348-27940367 | Msa0246590:CDS | 45.0% | |
GGTATCCAGAATGAGAATCC+GGG | - | chr2_2:27940349-27940368 | Msa0246590:CDS | 45.0% | |
TGTGGAGTATGAGTCGTCAT+CGG | - | chr2_2:27940390-27940409 | Msa0246590:CDS | 45.0% | |
!! | GGAATCTGAAGCATTGTCTC+CGG | - | chr2_2:27940435-27940454 | Msa0246590:CDS | 45.0% |
ACTGTTGCATCTGACATAGC+CGG | + | chr2_2:27940457-27940476 | None:intergenic | 45.0% | |
!! | TCCGATTTGTTAGCGGGAAA+TGG | - | chr2_2:27940514-27940533 | Msa0246590:CDS | 45.0% |
CCCATTTCCCGCTAACAAAT+CGG | + | chr2_2:27940518-27940537 | None:intergenic | 45.0% | |
!! | CCGATTTGTTAGCGGGAAAT+GGG | - | chr2_2:27940515-27940534 | Msa0246590:CDS | 45.0% |
TTTGTTAGCGGGAAATGGGT+CGG | - | chr2_2:27940519-27940538 | Msa0246590:CDS | 45.0% | |
! | ACCGGATTACTCGGTTTTTC+CGG | - | chr2_2:27940552-27940571 | Msa0246590:CDS | 45.0% |
!! | CCGGGTTTTGATGATTTTGG+TGG | - | chr2_2:27940571-27940590 | Msa0246590:CDS | 45.0% |
! | CTTGACTGACTTCTATGTGC+CGG | - | chr2_2:27940597-27940616 | Msa0246590:CDS | 45.0% |
AGAAGAGAACTTGGATGGGT+TGG | - | chr2_2:27940642-27940661 | Msa0246590:CDS | 45.0% | |
ACTTCCTCTTCCGTACTCCA+CGG | + | chr2_2:27940102-27940121 | None:intergenic | 50.0% | |
TGGAGTACGGAAGAGGAAGT+GGG | - | chr2_2:27940102-27940121 | Msa0246590:CDS | 50.0% | |
! | GTTAGGTTCTTACGACTCGG+CGG | - | chr2_2:27940174-27940193 | Msa0246590:CDS | 50.0% |
GATCCACCAAACATTGCTGG+TGG | - | chr2_2:27940271-27940290 | Msa0246590:CDS | 50.0% | |
CTTCCACCAGCAATGTTTGG+TGG | + | chr2_2:27940277-27940296 | None:intergenic | 50.0% | |
GCAGCAGCTTGAATCTCAGA+AGG | + | chr2_2:27940310-27940329 | None:intergenic | 50.0% | |
! | GCAGCCCGTTTTGCTAATTC+GGG | - | chr2_2:27940328-27940347 | Msa0246590:CDS | 50.0% |
TCGACCCGATAATGTCGTTG+TGG | - | chr2_2:27940372-27940391 | Msa0246590:CDS | 50.0% | |
GAGTATGAGTCGTCATCGGA+GGG | - | chr2_2:27940394-27940413 | Msa0246590:CDS | 50.0% | |
AGTATGAGTCGTCATCGGAG+GGG | - | chr2_2:27940395-27940414 | Msa0246590:CDS | 50.0% | |
TTGTTAGCGGGAAATGGGTC+GGG | - | chr2_2:27940520-27940539 | Msa0246590:CDS | 50.0% | |
TGGGTCGGGGAAATTTGAAC+CGG | - | chr2_2:27940534-27940553 | Msa0246590:CDS | 50.0% | |
CCCGGAAAAACCGAGTAATC+CGG | + | chr2_2:27940556-27940575 | None:intergenic | 50.0% | |
! | CCGGATTACTCGGTTTTTCC+GGG | - | chr2_2:27940553-27940572 | Msa0246590:CDS | 50.0% |
!! | AGAGAACTTGGATGGGTTGG+TGG | - | chr2_2:27940645-27940664 | Msa0246590:CDS | 50.0% |
TGTACCGTGGAGTACGGAAG+AGG | - | chr2_2:27940095-27940114 | Msa0246590:CDS | 55.0% | |
GTGGAGTACGGAAGAGGAAG+TGG | - | chr2_2:27940101-27940120 | Msa0246590:CDS | 55.0% | |
GGAGTACGGAAGAGGAAGTG+GGG | - | chr2_2:27940103-27940122 | Msa0246590:CDS | 55.0% | |
GAGTACGGAAGAGGAAGTGG+GGG | - | chr2_2:27940104-27940123 | Msa0246590:CDS | 55.0% | |
! | TTCTTACGACTCGGCGGAGA+AGG | - | chr2_2:27940180-27940199 | Msa0246590:CDS | 55.0% |
! | GCGGCGATGTTTTGCTTACG+TGG | - | chr2_2:27940220-27940239 | Msa0246590:CDS | 55.0% |
GTCGACCCGGATTCTCATTC+TGG | + | chr2_2:27940357-27940376 | None:intergenic | 55.0% | |
ACGACATTATCGGGTCGACC+CGG | + | chr2_2:27940370-27940389 | None:intergenic | 55.0% | |
GGAGTATGAGTCGTCATCGG+AGG | - | chr2_2:27940393-27940412 | Msa0246590:CDS | 55.0% | |
ATCGGAGGGGACTGCATTGT+TGG | - | chr2_2:27940408-27940427 | Msa0246590:CDS | 55.0% | |
! | GGGGACTGCATTGTTGGCTA+TGG | - | chr2_2:27940414-27940433 | Msa0246590:CDS | 55.0% |
TGTTAGCGGGAAATGGGTCG+GGG | - | chr2_2:27940521-27940540 | Msa0246590:CDS | 55.0% | |
! | TTACGACTCGGCGGAGAAGG+CGG | - | chr2_2:27940183-27940202 | Msa0246590:CDS | 60.0% |
GGCGGCGCGTGCTTTCGACG+CGG | - | chr2_2:27940201-27940220 | Msa0246590:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 27940043 | 27940696 | 27940043 | ID=Msa0246590;Name=Msa0246590 |
chr2_2 | mRNA | 27940043 | 27940696 | 27940043 | ID=Msa0246590-mRNA-1;Parent=Msa0246590;Name=Msa0246590-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|-1|0|1|-1|1|1|0|217 |
chr2_2 | exon | 27940043 | 27940696 | 27940043 | ID=Msa0246590-mRNA-1:exon:10129;Parent=Msa0246590-mRNA-1 |
chr2_2 | CDS | 27940043 | 27940696 | 27940043 | ID=Msa0246590-mRNA-1:cds;Parent=Msa0246590-mRNA-1 |
Gene Sequence |
Protein sequence |