Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748660 | G7JHT3 | 93.289 | 149 | 7 | 2 | 1 | 146 | 1 | 149 | 1.31e-96 | 284 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004480 | Msa0748660 | 0.837216 | 5.924762e-57 | -8.615850e-47 |
| Msa0012100 | Msa0748660 | 0.828385 | 9.259148e-55 | -8.615850e-47 |
| Msa0012710 | Msa0748660 | 0.803527 | 3.340558e-49 | -8.615850e-47 |
| Msa0030480 | Msa0748660 | 0.806790 | 6.933101e-50 | -8.615850e-47 |
| Msa0033850 | Msa0748660 | 0.805456 | 1.323145e-49 | -8.615850e-47 |
| Msa0048390 | Msa0748660 | 0.807280 | 5.461184e-50 | -8.615850e-47 |
| Msa0060070 | Msa0748660 | 0.827410 | 1.589136e-54 | -8.615850e-47 |
| Msa0061200 | Msa0748660 | 0.818960 | 1.492217e-52 | -8.615850e-47 |
| Msa0061500 | Msa0748660 | 0.821965 | 3.050131e-53 | -8.615850e-47 |
| Msa0071480 | Msa0748660 | 0.884271 | 2.211117e-71 | -8.615850e-47 |
| Msa0081940 | Msa0748660 | 0.835828 | 1.336488e-56 | -8.615850e-47 |
| Msa0082050 | Msa0748660 | 0.818773 | 1.645080e-52 | -8.615850e-47 |
| Msa0086560 | Msa0748660 | 0.825745 | 3.963362e-54 | -8.615850e-47 |
| Msa0105750 | Msa0748660 | 0.821376 | 4.172939e-53 | -8.615850e-47 |
| Msa0111080 | Msa0748660 | 0.802601 | 5.191903e-49 | -8.615850e-47 |
| Msa0119440 | Msa0748660 | 0.899146 | 2.646096e-77 | -8.615850e-47 |
| Msa0615680 | Msa0748660 | 0.820928 | 5.293404e-53 | -8.615850e-47 |
| Msa0631320 | Msa0748660 | 0.822556 | 2.223902e-53 | -8.615850e-47 |
| Msa0659790 | Msa0748660 | 0.845027 | 5.247122e-59 | -8.615850e-47 |
| Msa0699780 | Msa0748660 | 0.803034 | 4.225425e-49 | -8.615850e-47 |
| Msa0724370 | Msa0748660 | 0.835311 | 1.806617e-56 | -8.615850e-47 |
| Msa0743530 | Msa0748660 | 0.804834 | 1.785943e-49 | -8.615850e-47 |
| Msa0748660 | Msa0764920 | 0.834028 | 3.797634e-56 | -8.615850e-47 |
| Msa0748660 | Msa0769720 | 0.815597 | 8.521123e-52 | -8.615850e-47 |
| Msa0748660 | Msa0775560 | 0.821823 | 3.288738e-53 | -8.615850e-47 |
| Msa0748660 | Msa0775920 | 0.826963 | 2.032503e-54 | -8.615850e-47 |
| Msa0748660 | Msa0813260 | 0.855339 | 6.741663e-62 | -8.615850e-47 |
| Msa0748660 | Msa0844610 | 0.812969 | 3.244816e-51 | -8.615850e-47 |
| Msa0748660 | Msa0853810 | 0.827429 | 1.572312e-54 | -8.615850e-47 |
| Msa0748660 | Msa0860250 | 0.842602 | 2.339799e-58 | -8.615850e-47 |
| Msa0748660 | Msa0899400 | 0.813851 | 2.076145e-51 | -8.615850e-47 |
| Msa0748660 | Msa0968050 | 0.847685 | 9.888227e-60 | -8.615850e-47 |
| Msa0748660 | Msa0973070 | 0.838716 | 2.436987e-57 | -8.615850e-47 |
| Msa0748660 | Msa0999160 | 0.804362 | 2.240190e-49 | -8.615850e-47 |
| Msa0748660 | Msa1074540 | 0.819688 | 1.018360e-52 | -8.615850e-47 |
| Msa0748660 | Msa1078330 | 0.868178 | 7.919682e-66 | -8.615850e-47 |
| Msa0748660 | Msa1089270 | 0.802211 | 6.247325e-49 | -8.615850e-47 |
| Msa0748660 | Msa1098440 | 0.809469 | 1.863185e-50 | -8.615850e-47 |
| Msa0748660 | Msa1098460 | 0.825557 | 4.392817e-54 | -8.615850e-47 |
| Msa0748660 | Msa1108720 | 0.830487 | 2.857439e-55 | -8.615850e-47 |
| Msa0748660 | Msa1123720 | 0.862308 | 5.556574e-64 | -8.615850e-47 |
| Msa0748660 | Msa1152410 | 0.800071 | 1.711650e-48 | -8.615850e-47 |
| Msa0748660 | Msa1156820 | 0.813922 | 2.002891e-51 | -8.615850e-47 |
| Msa0748660 | Msa1197070 | 0.800145 | 1.653727e-48 | -8.615850e-47 |
| Msa0748660 | Msa1209190 | 0.807519 | 4.859310e-50 | -8.615850e-47 |
| Msa0748660 | Msa1209860 | 0.812041 | 5.175967e-51 | -8.615850e-47 |
| Msa0748660 | Msa1220880 | 0.811604 | 6.444272e-51 | -8.615850e-47 |
| Msa0748660 | Msa1225100 | 0.829979 | 3.801823e-55 | -8.615850e-47 |
| Msa0748660 | Msa1238680 | 0.834588 | 2.747981e-56 | -8.615850e-47 |
| Msa0748660 | Msa1246700 | 0.802074 | 6.665797e-49 | -8.615850e-47 |
| Msa0748660 | Msa1258470 | 0.823595 | 1.272860e-53 | -8.615850e-47 |
| Msa0748660 | Msa1258670 | 0.861836 | 7.752279e-64 | -8.615850e-47 |
| Msa0748660 | Msa1260680 | 0.801623 | 8.251713e-49 | -8.615850e-47 |
| Msa0748660 | Msa1266170 | 0.802218 | 6.226784e-49 | -8.615850e-47 |
| Msa0748660 | Msa1266330 | 0.812864 | 3.420508e-51 | -8.615850e-47 |
| Msa0748660 | Msa1277780 | 0.822916 | 1.834021e-53 | -8.615850e-47 |
| Msa0748660 | Msa1280150 | 0.835657 | 1.476805e-56 | -8.615850e-47 |
| Msa0748660 | Msa1280170 | 0.847058 | 1.469880e-59 | -8.615850e-47 |
| Msa0748660 | Msa1285200 | 0.847311 | 1.253392e-59 | -8.615850e-47 |
| Msa0748660 | Msa1329870 | 0.828760 | 7.516453e-55 | -8.615850e-47 |
| Msa0748660 | Msa1334400 | 0.802303 | 5.981849e-49 | -8.615850e-47 |
| Msa0748660 | Msa1361250 | 0.855743 | 5.139543e-62 | -8.615850e-47 |
| Msa0748660 | Msa1364160 | 0.801180 | 1.016882e-48 | -8.615850e-47 |
| Msa0748660 | Msa1376450 | 0.808194 | 3.492036e-50 | -8.615850e-47 |
| Msa0748660 | Msa1389760 | 0.840184 | 1.012918e-57 | -8.615850e-47 |
| Msa0748660 | Msa1391550 | 0.806434 | 8.242136e-50 | -8.615850e-47 |
| Msa0748660 | Msa1405220 | 0.836987 | 6.779683e-57 | -8.615850e-47 |
| Msa0748660 | Msa1421900 | 0.908389 | 1.804538e-81 | -8.615850e-47 |
| Msa0748660 | Msa1424350 | 0.805024 | 1.629517e-49 | -8.615850e-47 |
| Msa0748660 | Msa1462470 | 0.839279 | 1.742371e-57 | -8.615850e-47 |
| Msa0126880 | Msa0748660 | 0.819284 | 1.258893e-52 | -8.615850e-47 |
| Msa0128430 | Msa0748660 | 0.834788 | 2.447869e-56 | -8.615850e-47 |
| Msa0133100 | Msa0748660 | 0.831752 | 1.396774e-55 | -8.615850e-47 |
| Msa0136630 | Msa0748660 | 0.843822 | 1.106206e-58 | -8.615850e-47 |
| Msa0138900 | Msa0748660 | 0.824891 | 6.313831e-54 | -8.615850e-47 |
| Msa0152120 | Msa0748660 | 0.803267 | 3.781508e-49 | -8.615850e-47 |
| Msa0152560 | Msa0748660 | 0.832704 | 8.121086e-56 | -8.615850e-47 |
| Msa0162690 | Msa0748660 | 0.859858 | 3.091446e-63 | -8.615850e-47 |
| Msa0171980 | Msa0748660 | 0.815445 | 9.213254e-52 | -8.615850e-47 |
| Msa0187310 | Msa0748660 | 0.840439 | 8.687675e-58 | -8.615850e-47 |
| Msa0189610 | Msa0748660 | 0.805947 | 1.043889e-49 | -8.615850e-47 |
| Msa0192640 | Msa0748660 | 0.800659 | 1.299040e-48 | -8.615850e-47 |
| Msa0213430 | Msa0748660 | 0.849426 | 3.259296e-60 | -8.615850e-47 |
| Msa0228530 | Msa0748660 | 0.822176 | 2.724403e-53 | -8.615850e-47 |
| Msa0364790 | Msa0748660 | 0.837363 | 5.433992e-57 | -8.615850e-47 |
| Msa0380600 | Msa0748660 | 0.845643 | 3.574122e-59 | -8.615850e-47 |
| Msa0382370 | Msa0748660 | 0.814602 | 1.417330e-51 | -8.615850e-47 |
| Msa0403490 | Msa0748660 | 0.800700 | 1.274603e-48 | -8.615850e-47 |
| Msa0418400 | Msa0748660 | 0.890029 | 1.425388e-73 | -8.615850e-47 |
| Msa0418410 | Msa0748660 | 0.858136 | 1.013395e-62 | -8.615850e-47 |
| Msa0430240 | Msa0748660 | 0.848443 | 6.109058e-60 | -8.615850e-47 |
| Msa0437070 | Msa0748660 | 0.879603 | 1.088609e-69 | -8.615850e-47 |
| Msa0463490 | Msa0748660 | 0.803086 | 4.121948e-49 | -8.615850e-47 |
| Msa0472710 | Msa0748660 | 0.897578 | 1.227150e-76 | -8.615850e-47 |
| Msa0472720 | Msa0748660 | 0.887507 | 1.342533e-72 | -8.615850e-47 |
| Msa0472760 | Msa0748660 | 0.840014 | 1.121864e-57 | -8.615850e-47 |
| Msa0472770 | Msa0748660 | 0.887872 | 9.735007e-73 | -8.615850e-47 |
| Msa0482280 | Msa0748660 | 0.865226 | 6.886665e-65 | -8.615850e-47 |
| Msa0239060 | Msa0748660 | 0.819480 | 1.135787e-52 | -8.615850e-47 |
| Msa0245540 | Msa0748660 | 0.802925 | 4.451068e-49 | -8.615850e-47 |
| Msa0246590 | Msa0748660 | 0.809198 | 2.129944e-50 | -8.615850e-47 |
| Msa0259440 | Msa0748660 | 0.866149 | 3.521398e-65 | -8.615850e-47 |
| Msa0259580 | Msa0748660 | 0.873860 | 1.059371e-67 | -8.615850e-47 |
| Msa0284240 | Msa0748660 | 0.831425 | 1.681682e-55 | -8.615850e-47 |
| Msa0285070 | Msa0748660 | 0.809652 | 1.702368e-50 | -8.615850e-47 |
| Msa0305620 | Msa0748660 | 0.887115 | 1.894784e-72 | -8.615850e-47 |
| Msa0319290 | Msa0748660 | 0.807942 | 3.950250e-50 | -8.615850e-47 |
| Msa0347750 | Msa0748660 | 0.829395 | 5.272003e-55 | -8.615850e-47 |
| Msa0358110 | Msa0748660 | 0.894526 | 2.270590e-75 | -8.615850e-47 |
| Msa0358120 | Msa0748660 | 0.889262 | 2.834847e-73 | -8.615850e-47 |
| Msa0500400 | Msa0748660 | 0.812137 | 4.931883e-51 | -8.615850e-47 |
| Msa0534870 | Msa0748660 | 0.819702 | 1.011151e-52 | -8.615850e-47 |
| Msa0536160 | Msa0748660 | 0.811904 | 5.543579e-51 | -8.615850e-47 |
| Msa0581970 | Msa0748660 | 0.818598 | 1.802882e-52 | -8.615850e-47 |
| Msa0583670 | Msa0748660 | 0.831087 | 2.036165e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748660 | MtrunA17_Chr4g0065221 | 93.289 | 149 | 7 | 2 | 1 | 146 | 1 | 149 | 2.52e-100 | 284 |
| Msa0748660 | MtrunA17_Chr2g0305131 | 59.459 | 148 | 49 | 6 | 1 | 145 | 1 | 140 | 6.78e-48 | 151 |
| Msa0748660 | MtrunA17_Chr4g0059251 | 39.130 | 69 | 42 | 0 | 66 | 134 | 62 | 130 | 4.02e-12 | 60.1 |
| Msa0748660 | MtrunA17_Chr6g0451141 | 31.897 | 116 | 70 | 3 | 14 | 124 | 14 | 125 | 9.76e-11 | 56.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748660 | AT5G25240.1 | 39.024 | 123 | 56 | 6 | 17 | 127 | 11 | 126 | 1.25e-20 | 82.0 |
| Msa0748660 | AT5G14895.1 | 38.202 | 89 | 42 | 3 | 61 | 136 | 60 | 148 | 6.62e-12 | 60.5 |
Find 39 sgRNAs with CRISPR-Local
Find 41 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAGTGGAAAACGTTTCTT+AGG | 0.293276 | 5_2:+1916368 | Msa0748660:CDS |
| CTTAGGAAAATTAGTGGGTA+TGG | 0.339302 | 5_2:+1916385 | Msa0748660:CDS |
| TATGCTCTTAATTTCAATAG+TGG | 0.374345 | 5_2:+1916448 | Msa0748660:CDS |
| TCATTCTGGCGACGTGCATC+TGG | 0.387586 | 5_2:-1916535 | None:intergenic |
| ATATATATCATGTTTCATTC+TGG | 0.388657 | 5_2:-1916549 | None:intergenic |
| AAACAACATGGCTGCCTATG+AGG | 0.423463 | 5_2:+1916117 | None:intergenic |
| CACCAATGGTCTTCCCTCAT+AGG | 0.431252 | 5_2:-1916131 | None:intergenic |
| ATGCTCTTAATTTCAATAGT+GGG | 0.436223 | 5_2:+1916449 | Msa0748660:CDS |
| AACGGGTATGGATGCGGGTG+CGG | 0.443003 | 5_2:+1916190 | Msa0748660:CDS |
| AAGACCATTGGTGATGGAAA+TGG | 0.450625 | 5_2:+1916141 | Msa0748660:CDS |
| GAAAATAGTGAAGGAAATAG+AGG | 0.458494 | 5_2:+1916280 | Msa0748660:CDS |
| TGGCGACGTGCATCTGGAAA+AGG | 0.467598 | 5_2:-1916529 | None:intergenic |
| CTTTCCATTTCCATCACCAA+TGG | 0.472269 | 5_2:-1916145 | None:intergenic |
| TTAGGAAAATTAGTGGGTAT+GGG | 0.477370 | 5_2:+1916386 | Msa0748660:CDS |
| GTGGCGTTGCCACGATTTCA+AGG | 0.486009 | 5_2:-1916230 | None:intergenic |
| TTCGAAGAGACCAACGGGTA+TGG | 0.486097 | 5_2:+1916178 | Msa0748660:CDS |
| GAGACTTCAGAAGTGATTGC+TGG | 0.496587 | 5_2:+1916343 | Msa0748660:CDS |
| GGTATGGATGCGGGTGCGGA+TGG | 0.500992 | 5_2:+1916194 | Msa0748660:CDS |
| AAGATTTCGAAGAGACCAAC+GGG | 0.512584 | 5_2:+1916173 | Msa0748660:CDS |
| GAGACCAACGGGTATGGATG+CGG | 0.514745 | 5_2:+1916184 | Msa0748660:CDS |
| AGACCAACGGGTATGGATGC+GGG | 0.516345 | 5_2:+1916185 | Msa0748660:CDS |
| AGGAGAAGAGACATGGATGA+TGG | 0.526434 | 5_2:+1916300 | Msa0748660:CDS |
| TGCTCTTAATTTCAATAGTG+GGG | 0.526773 | 5_2:+1916450 | Msa0748660:CDS |
| ACGTTTCTTAGGAAAATTAG+TGG | 0.531357 | 5_2:+1916379 | Msa0748660:CDS |
| GGACAAGTTGAGGAAGATGA+AGG | 0.537471 | 5_2:+1916321 | Msa0748660:CDS |
| AACAACATGGCTGCCTATGA+GGG | 0.543567 | 5_2:+1916118 | None:intergenic |
| TGGCAACGCCACGACGAAGA+AGG | 0.555768 | 5_2:+1916241 | Msa0748660:CDS |
| GAAATAGAGGAGAAGAGACA+TGG | 0.562044 | 5_2:+1916293 | Msa0748660:CDS |
| AAGTGATTGCTGGTCCTAAG+TGG | 0.571200 | 5_2:+1916353 | Msa0748660:CDS |
| AAATATTCACCTTGAAATCG+TGG | 0.578098 | 5_2:+1916221 | Msa0748660:CDS |
| CATGGATGATGGACAAGTTG+AGG | 0.582027 | 5_2:+1916311 | Msa0748660:CDS |
| CGTTTCTTAGGAAAATTAGT+GGG | 0.584307 | 5_2:+1916380 | Msa0748660:CDS |
| TGAGGGAAGACCATTGGTGA+TGG | 0.585967 | 5_2:+1916135 | Msa0748660:CDS |
| CTACTTAATGAAAATAGTGA+AGG | 0.588080 | 5_2:+1916271 | Msa0748660:CDS |
| TGCCTATGAGGGAAGACCAT+TGG | 0.600498 | 5_2:+1916129 | Msa0748660:CDS |
| CAAGATTTCGAAGAGACCAA+CGG | 0.625236 | 5_2:+1916172 | Msa0748660:CDS |
| GATGCTTACCTTCTTCGTCG+TGG | 0.640185 | 5_2:-1916249 | None:intergenic |
| AAAAGGATTAGAAAACCTTG+TGG | 0.651946 | 5_2:-1916512 | None:intergenic |
| GCACCCGCATCCATACCCGT+TGG | 0.669123 | 5_2:-1916188 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CTACTTAATGAAAATAGTGA+AGG | + | chr5_2:1916271-1916290 | Msa0748660:CDS | 25.0% |
| ! | TATGCTCTTAATTTCAATAG+TGG | + | chr5_2:1916448-1916467 | Msa0748660:CDS | 25.0% |
| ! | ATGCTCTTAATTTCAATAGT+GGG | + | chr5_2:1916449-1916468 | Msa0748660:CDS | 25.0% |
| AAATATTCACCTTGAAATCG+TGG | + | chr5_2:1916221-1916240 | Msa0748660:CDS | 30.0% | |
| GAAAATAGTGAAGGAAATAG+AGG | + | chr5_2:1916280-1916299 | Msa0748660:CDS | 30.0% | |
| ACGTTTCTTAGGAAAATTAG+TGG | + | chr5_2:1916379-1916398 | Msa0748660:CDS | 30.0% | |
| CGTTTCTTAGGAAAATTAGT+GGG | + | chr5_2:1916380-1916399 | Msa0748660:CDS | 30.0% | |
| ! | TTAGGAAAATTAGTGGGTAT+GGG | + | chr5_2:1916386-1916405 | Msa0748660:CDS | 30.0% |
| ! | ATGGGAAAAAACAAAAGCAT+AGG | + | chr5_2:1916404-1916423 | Msa0748660:CDS | 30.0% |
| TGCTCTTAATTTCAATAGTG+GGG | + | chr5_2:1916450-1916469 | Msa0748660:CDS | 30.0% | |
| AAAAGGATTAGAAAACCTTG+TGG | - | chr5_2:1916515-1916534 | None:intergenic | 30.0% | |
| ! | CTAAGAAACGTTTTCCACTT+AGG | - | chr5_2:1916370-1916389 | None:intergenic | 35.0% |
| CTAAGTGGAAAACGTTTCTT+AGG | + | chr5_2:1916368-1916387 | Msa0748660:CDS | 35.0% | |
| ! | CTTAGGAAAATTAGTGGGTA+TGG | + | chr5_2:1916385-1916404 | Msa0748660:CDS | 35.0% |
| GAAAACCTTGTGGAAAAACT+TGG | - | chr5_2:1916505-1916524 | None:intergenic | 35.0% | |
| !! | AAGACCATTGGTGATGGAAA+TGG | + | chr5_2:1916141-1916160 | Msa0748660:CDS | 40.0% |
| CTTTCCATTTCCATCACCAA+TGG | - | chr5_2:1916148-1916167 | None:intergenic | 40.0% | |
| CAAGATTTCGAAGAGACCAA+CGG | + | chr5_2:1916172-1916191 | Msa0748660:CDS | 40.0% | |
| AAGATTTCGAAGAGACCAAC+GGG | + | chr5_2:1916173-1916192 | Msa0748660:CDS | 40.0% | |
| GAAATAGAGGAGAAGAGACA+TGG | + | chr5_2:1916293-1916312 | Msa0748660:CDS | 40.0% | |
| AACCTTGTGGAAAAACTTGG+AGG | - | chr5_2:1916502-1916521 | None:intergenic | 40.0% | |
| AGGAGAAGAGACATGGATGA+TGG | + | chr5_2:1916300-1916319 | Msa0748660:CDS | 45.0% | |
| !! | CATGGATGATGGACAAGTTG+AGG | + | chr5_2:1916311-1916330 | Msa0748660:CDS | 45.0% |
| ! | GGACAAGTTGAGGAAGATGA+AGG | + | chr5_2:1916321-1916340 | Msa0748660:CDS | 45.0% |
| GAGACTTCAGAAGTGATTGC+TGG | + | chr5_2:1916343-1916362 | Msa0748660:CDS | 45.0% | |
| AAGTGATTGCTGGTCCTAAG+TGG | + | chr5_2:1916353-1916372 | Msa0748660:CDS | 45.0% | |
| ! | TGCCTCCAAGTTTTTCCACA+AGG | + | chr5_2:1916497-1916516 | Msa0748660:CDS | 45.0% |
| TGCCTATGAGGGAAGACCAT+TGG | + | chr5_2:1916129-1916148 | Msa0748660:CDS | 50.0% | |
| CACCAATGGTCTTCCCTCAT+AGG | - | chr5_2:1916134-1916153 | None:intergenic | 50.0% | |
| TGAGGGAAGACCATTGGTGA+TGG | + | chr5_2:1916135-1916154 | Msa0748660:CDS | 50.0% | |
| TTCGAAGAGACCAACGGGTA+TGG | + | chr5_2:1916178-1916197 | Msa0748660:CDS | 50.0% | |
| GATGCTTACCTTCTTCGTCG+TGG | - | chr5_2:1916252-1916271 | None:intergenic | 50.0% | |
| GAGACCAACGGGTATGGATG+CGG | + | chr5_2:1916184-1916203 | Msa0748660:CDS | 55.0% | |
| AGACCAACGGGTATGGATGC+GGG | + | chr5_2:1916185-1916204 | Msa0748660:CDS | 55.0% | |
| GTGGCGTTGCCACGATTTCA+AGG | - | chr5_2:1916233-1916252 | None:intergenic | 55.0% | |
| TGGCGACGTGCATCTGGAAA+AGG | - | chr5_2:1916532-1916551 | None:intergenic | 55.0% | |
| TCATTCTGGCGACGTGCATC+TGG | - | chr5_2:1916538-1916557 | None:intergenic | 55.0% | |
| AACGGGTATGGATGCGGGTG+CGG | + | chr5_2:1916190-1916209 | Msa0748660:CDS | 60.0% | |
| TGGCAACGCCACGACGAAGA+AGG | + | chr5_2:1916241-1916260 | Msa0748660:CDS | 60.0% | |
| GCACCCGCATCCATACCCGT+TGG | - | chr5_2:1916191-1916210 | None:intergenic | 65.0% | |
| GGTATGGATGCGGGTGCGGA+TGG | + | chr5_2:1916194-1916213 | Msa0748660:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 1916124 | 1916564 | 1916124 | ID=Msa0748660;Name=Msa0748660 |
| chr5_2 | mRNA | 1916124 | 1916564 | 1916124 | ID=Msa0748660-mRNA-1;Parent=Msa0748660;Name=Msa0748660-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|146 |
| chr5_2 | exon | 1916124 | 1916564 | 1916124 | ID=Msa0748660-mRNA-1:exon:561;Parent=Msa0748660-mRNA-1 |
| chr5_2 | CDS | 1916124 | 1916564 | 1916124 | ID=Msa0748660-mRNA-1:cds;Parent=Msa0748660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
