AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0249370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0249370 MtrunA17_Chr2g0304841 91.279 688 56 2 3 689 4 688 0.0 1264
Msa0249370 MtrunA17_Chr4g0074401 42.944 659 296 15 1 651 1 587 5.51e-142 427
Msa0249370 MtrunA17_Chr4g0074411 42.245 677 305 18 1 666 2 603 9.89e-139 419
Msa0249370 MtrunA17_Chr3g0137101 39.914 699 331 17 15 686 6 642 1.60e-135 412
Msa0249370 MtrunA17_Chr1g0149841 44.286 490 216 13 15 495 3 444 2.48e-113 350
Msa0249370 MtrunA17_Chr1g0149851 50.427 351 138 7 15 345 3 337 3.31e-97 310
Msa0249370 MtrunA17_Chr7g0275891 47.945 365 124 11 15 357 3 323 9.03e-92 289
Msa0249370 MtrunA17_Chr4g0067981 45.526 380 174 7 15 382 29 387 4.26e-91 298
Msa0249370 MtrunA17_Chr1g0161431 49.508 305 137 5 17 317 11 302 1.00e-85 282
Msa0249370 MtrunA17_Chr7g0275401 55.385 260 105 3 15 274 3 251 1.41e-84 268
Msa0249370 MtrunA17_Chr2g0294911 41.823 373 181 7 13 382 25 364 2.21e-84 278
Msa0249370 MtrunA17_Chr8g0376881 52.692 260 107 3 14 272 22 266 3.39e-80 265
Msa0249370 MtrunA17_Chr3g0123131 54.086 257 104 3 17 272 13 256 4.13e-79 263
Msa0249370 MtrunA17_Chr4g0074421 57.143 203 70 3 67 269 2 187 1.27e-63 209
Msa0249370 MtrunA17_Chr1g0149831 56.784 199 71 3 76 274 1 184 1.78e-63 210
Msa0249370 MtrunA17_Chr3g0134481 65.909 132 45 0 11 142 2 133 1.43e-53 182
Msa0249370 MtrunA17_Chr3g0134481 62.264 53 20 0 214 266 131 183 2.31e-16 77.8
Msa0249370 MtrunA17_Chr4g0009851 36.822 258 123 4 17 274 11 228 1.92e-47 170
Msa0249370 MtrunA17_Chr4g0009901 34.630 257 128 4 17 273 10 226 1.58e-43 158
Msa0249370 MtrunA17_Chr3g0134461 63.433 134 48 1 11 143 2 135 5.24e-40 145
Msa0249370 MtrunA17_Chr3g0134461 67.797 59 19 0 206 264 134 192 1.69e-18 84.3
Msa0249370 MtrunA17_Chr4g0009981 35.211 213 99 3 62 274 2 175 5.63e-36 136
Msa0249370 MtrunA17_Chr6g0471041 32.331 266 138 5 11 275 8 232 2.96e-35 138
Msa0249370 MtrunA17_Chr8g0391911 30.588 255 149 5 17 264 9 242 5.07e-28 113
Msa0249370 MtrunA17_Chr8g0350761 27.843 255 174 4 20 267 20 271 4.10e-26 112
Msa0249370 MtrunA17_Chr3g0127941 38.095 126 73 2 21 142 56 180 6.01e-24 107
Msa0249370 MtrunA17_Chr7g0276361 38.356 146 77 3 18 153 11 153 8.32e-24 106
Msa0249370 MtrunA17_Chr4g0031961 60.526 76 30 0 197 272 113 188 1.21e-23 102
Msa0249370 MtrunA17_Chr6g0473731 35.625 160 70 2 112 271 25 151 2.30e-23 103
Msa0249370 MtrunA17_Chr1g0181811 39.344 122 71 2 21 139 85 206 3.63e-23 105
Msa0249370 MtrunA17_Chr4g0030271 40.945 127 71 2 17 139 84 210 3.94e-23 105
Msa0249370 MtrunA17_Chr7g0255711 59.155 71 29 0 202 272 78 148 7.59e-22 96.7
Msa0249370 MtrunA17_Chr8g0345901 34.932 146 84 2 23 157 38 183 6.55e-21 97.4
Msa0249370 MtrunA17_Chr8g0383961 33.094 139 93 0 9 147 6 144 1.03e-20 92.4
Msa0249370 MtrunA17_Chr4g0009991 32.258 155 65 2 110 264 2 116 9.98e-20 85.5
Msa0249370 MtrunA17_Chr3g0091641 28.251 223 147 4 5 218 10 228 1.71e-19 92.8
Msa0249370 MtrunA17_Chr4g0011071 28.571 175 86 3 67 241 39 174 1.21e-18 84.3
Msa0249370 MtrunA17_Chr4g0061021 31.373 153 100 2 5 154 19 169 1.43e-18 90.1
Msa0249370 MtrunA17_Chr6g0456631 31.579 133 88 2 15 145 7 138 5.41e-18 82.0
Msa0249370 MtrunA17_Chr4g0054981 56.923 65 28 0 211 275 306 370 7.67e-18 87.4
Msa0249370 MtrunA17_Chr4g0054981 32.800 125 78 4 17 139 14 134 7.27e-11 65.5
Msa0249370 MtrunA17_Chr5g0400241 31.183 186 105 5 211 383 307 482 9.36e-18 87.0
Msa0249370 MtrunA17_Chr5g0400241 36.508 126 72 5 17 139 14 134 1.10e-12 71.2
Msa0249370 MtrunA17_Chr2g0324891 47.436 78 41 0 194 271 140 217 3.21e-17 84.7
Msa0249370 MtrunA17_Chr4g0040481 56.452 62 27 0 210 271 153 214 5.13e-17 84.0
Msa0249370 MtrunA17_Chr6g0461641 57.627 59 24 1 211 268 38 96 2.51e-15 78.6
Msa0249370 MtrunA17_Chr7g0274471 56.522 69 28 2 213 279 216 284 4.21e-15 78.2
Msa0249370 MtrunA17_Chr2g0321461 57.627 59 24 1 211 268 41 99 4.30e-15 77.8
Msa0249370 MtrunA17_Chr1g0190301 58.621 58 23 1 211 267 171 228 7.87e-15 77.0
Msa0249370 MtrunA17_Chr1g0175081 53.333 60 27 1 217 275 24 83 1.11e-14 70.5
Msa0249370 MtrunA17_Chr7g0261911 58.621 58 23 1 211 267 258 315 1.61e-14 76.6
Msa0249370 MtrunA17_Chr4g0062921 49.231 65 32 1 212 275 232 296 1.94e-14 76.3
Msa0249370 MtrunA17_Chr5g0417521 54.237 59 26 1 211 268 11 69 2.25e-14 75.1
Msa0249370 MtrunA17_Chr1g0198601 35.897 117 68 3 208 319 204 318 2.38e-14 75.5
Msa0249370 MtrunA17_Chr5g0422621 32.886 149 82 6 205 348 188 323 4.58e-14 74.3
Msa0249370 MtrunA17_Chr4g0045361 40.566 106 48 4 212 310 271 368 7.37e-14 74.3
Msa0249370 MtrunA17_Chr7g0256551 31.579 171 86 5 21 170 9 169 2.65e-13 70.1
Msa0249370 MtrunA17_Chr2g0288601 53.333 60 27 1 214 272 70 129 6.05e-13 66.2
Msa0249370 MtrunA17_Chr6g0469321 70.455 44 13 0 231 274 70 113 8.48e-13 67.4
Msa0249370 MtrunA17_Chr5g0409731 54.545 55 24 1 215 268 25 79 1.06e-12 69.3
Msa0249370 MtrunA17_Chr1g0197171 52.542 59 27 1 211 268 40 98 1.50e-12 68.9
Msa0249370 MtrunA17_Chr2g0290991 44.595 74 36 2 200 268 20 93 4.35e-12 67.8
Msa0249370 MtrunA17_Chr7g0243081 54.545 55 24 1 214 267 70 124 5.11e-12 68.2
Msa0249370 MtrunA17_Chr5g0402631 50.000 62 30 1 212 272 211 272 5.50e-12 67.8
Msa0249370 MtrunA17_Chr4g0042451 49.153 59 29 1 211 268 13 71 6.10e-12 67.8
Msa0249370 MtrunA17_Chr7g0254981 54.545 55 24 1 215 268 50 104 6.35e-12 67.0
Msa0249370 MtrunA17_Chr7g0258551 57.407 54 22 1 215 267 212 265 6.99e-12 67.8
Msa0249370 MtrunA17_Chr2g0320231 54.545 55 24 1 214 267 96 150 1.07e-11 67.4
Msa0249370 MtrunA17_Chr1g0175091 56.364 55 23 1 215 268 258 312 1.36e-11 67.4
Msa0249370 MtrunA17_Chr8g0379121 52.727 55 25 1 214 267 110 164 1.39e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0249370 AT2G25180.1 44.316 431 206 9 13 429 9 419 7.21e-104 329
Msa0249370 AT5G58080.1 42.412 514 229 15 10 494 7 482 2.70e-97 313
Msa0249370 AT4G31920.1 48.238 369 142 8 13 374 9 335 3.75e-94 302
Msa0249370 AT3G16857.2 32.196 733 377 23 5 685 21 685 3.39e-92 301
Msa0249370 AT3G16857.1 35.677 569 250 16 5 504 21 542 2.21e-91 298
Msa0249370 AT1G67710.1 55.039 258 99 4 18 272 8 251 9.29e-78 258
Msa0249370 AT3G16857.3 31.232 682 349 23 56 685 2 615 1.17e-75 255
Msa0249370 AT2G01760.1 47.601 271 115 5 15 274 5 259 2.81e-71 236
Msa0249370 AT2G01760.2 43.144 299 115 6 15 274 5 287 3.00e-65 221
Msa0249370 AT1G67710.2 54.500 200 74 4 76 272 1 186 1.03e-52 189
Msa0249370 AT2G01760.3 48.571 210 81 5 76 274 1 194 6.09e-50 177
Msa0249370 AT5G49240.1 37.097 248 143 2 17 264 38 272 5.94e-44 160
Msa0249370 AT3G62670.1 38.211 246 124 7 36 275 54 277 2.26e-41 156
Msa0249370 AT1G67710.3 49.444 180 74 4 96 272 12 177 2.12e-38 148
Msa0249370 AT1G49190.1 29.446 343 194 9 3 335 16 320 3.96e-37 144
Msa0249370 AT5G07210.2 29.697 330 206 10 19 328 14 337 1.03e-32 134
Msa0249370 AT5G07210.1 28.994 338 206 11 19 328 14 345 2.17e-30 127
Msa0249370 AT2G27070.1 29.377 337 197 9 19 327 14 337 5.62e-30 125
Msa0249370 AT5G59570.2 52.688 93 44 0 180 272 106 198 2.02e-25 107
Msa0249370 AT5G59570.1 52.688 93 44 0 180 272 106 198 2.02e-25 107
Msa0249370 AT5G24470.1 38.194 144 80 4 11 146 36 178 4.01e-25 110
Msa0249370 AT2G46790.3 39.024 123 70 2 21 139 37 158 8.30e-24 105
Msa0249370 AT2G46790.1 39.024 123 70 2 21 139 37 158 1.14e-23 105
Msa0249370 AT1G49190.2 35.507 138 89 0 3 140 16 153 1.50e-23 106
Msa0249370 AT5G05090.1 58.667 75 30 1 199 272 64 138 3.87e-23 100
Msa0249370 AT3G10760.1 56.098 82 35 1 192 272 81 162 1.05e-22 100
Msa0249370 AT3G46640.2 69.492 59 18 0 214 272 143 201 1.86e-22 99.4
Msa0249370 AT3G46640.1 69.492 59 18 0 214 272 143 201 1.86e-22 99.4
Msa0249370 AT3G46640.3 58.904 73 30 0 200 272 129 201 2.22e-22 99.4
Msa0249370 AT2G40970.1 55.844 77 34 0 196 272 86 162 2.45e-22 97.4
Msa0249370 AT5G60100.7 37.008 127 76 2 17 139 59 185 3.81e-21 97.1
Msa0249370 AT5G60100.6 37.008 127 76 2 17 139 59 185 3.81e-21 97.1
Msa0249370 AT5G60100.4 37.008 127 76 2 17 139 59 185 3.81e-21 97.1
Msa0249370 AT5G60100.5 37.008 127 76 2 17 139 59 185 6.54e-21 97.1
Msa0249370 AT5G60100.3 37.008 127 76 2 17 139 59 185 6.54e-21 97.1
Msa0249370 AT5G60100.1 37.008 127 76 2 17 139 59 185 6.54e-21 97.1
Msa0249370 AT5G02810.1 37.705 122 73 1 21 139 78 199 7.88e-21 97.8
Msa0249370 AT5G60100.2 37.008 127 76 2 17 139 59 185 1.24e-20 96.7
Msa0249370 AT5G61380.1 35.075 134 82 2 11 141 11 142 1.03e-19 94.0
Msa0249370 AT5G44190.2 62.121 66 23 1 206 271 140 203 4.05e-19 90.1
Msa0249370 AT5G44190.1 62.121 66 23 1 206 271 140 203 4.79e-19 90.1
Msa0249370 AT1G68210.1 25.475 263 179 4 21 267 13 274 7.04e-19 91.7
Msa0249370 AT4G18020.8 39.669 121 55 1 173 275 236 356 3.89e-16 82.4
Msa0249370 AT4G18020.11 39.669 121 55 1 173 275 236 356 3.89e-16 82.4
Msa0249370 AT4G18020.4 39.669 121 55 1 173 275 236 356 3.89e-16 82.4
Msa0249370 AT4G18020.5 39.669 121 55 1 173 275 236 356 3.89e-16 82.4
Msa0249370 AT4G18020.10 39.669 121 55 1 173 275 236 356 3.89e-16 82.4
Msa0249370 AT4G18020.7 39.669 121 55 1 173 275 236 356 3.89e-16 82.4
Msa0249370 AT2G20570.1 59.322 59 24 0 213 271 151 209 4.26e-16 81.6
Msa0249370 AT4G18020.3 39.669 121 55 1 173 275 236 356 5.31e-16 82.0
Msa0249370 AT4G18020.2 39.669 121 55 1 173 275 236 356 5.31e-16 82.0
Msa0249370 AT4G18020.1 39.669 121 55 1 173 275 236 356 5.31e-16 82.0
Msa0249370 AT4G18020.6 39.669 121 55 1 173 275 236 356 5.31e-16 82.0
Msa0249370 AT4G18020.9 39.669 121 55 1 173 275 236 356 5.31e-16 82.0
Msa0249370 AT2G20570.2 61.818 55 21 0 217 271 171 225 1.94e-15 79.7
Msa0249370 AT3G04030.1 57.627 59 24 1 211 268 41 99 5.38e-15 77.8
Msa0249370 AT3G04030.3 57.627 59 24 1 211 268 41 99 5.67e-15 77.8
Msa0249370 AT5G18240.2 57.627 59 24 1 211 268 41 99 1.07e-14 77.0
Msa0249370 AT5G18240.3 57.627 59 24 1 211 268 41 99 1.07e-14 77.0
Msa0249370 AT5G18240.5 57.627 59 24 1 211 268 41 99 1.14e-14 77.0
Msa0249370 AT5G18240.1 57.627 59 24 1 211 268 41 99 1.18e-14 77.0
Msa0249370 AT5G18240.4 57.627 59 24 1 211 268 41 99 1.18e-14 77.0
Msa0249370 AT2G03500.1 50.769 65 31 1 212 275 230 294 1.76e-14 76.6
Msa0249370 AT1G25550.1 38.983 118 62 4 212 324 206 318 2.74e-14 75.5
Msa0249370 AT3G04030.2 53.448 58 27 0 211 268 41 98 7.27e-14 74.3
Msa0249370 AT2G42660.1 47.619 84 40 3 216 298 51 131 1.33e-13 72.0
Msa0249370 AT5G45580.1 56.364 55 23 1 215 268 7 61 5.01e-13 70.5
Msa0249370 AT5G45580.2 56.364 55 23 1 215 268 23 77 5.19e-13 70.5
Msa0249370 AT4G28610.1 49.231 65 32 1 215 278 225 289 2.44e-12 69.7
Msa0249370 AT1G68670.1 33.333 132 77 5 212 334 212 341 2.50e-12 69.3
Msa0249370 AT4G37180.1 43.750 80 38 2 210 282 199 278 3.29e-12 68.9
Msa0249370 AT4G37180.2 43.750 80 38 2 210 282 206 285 3.98e-12 68.9
Msa0249370 AT3G25790.1 31.405 121 72 3 219 328 200 320 5.10e-12 68.6
Msa0249370 AT5G06800.3 50.000 68 33 1 202 268 179 246 6.13e-12 67.4
Msa0249370 AT4G04605.1 54.545 55 24 1 214 267 13 67 1.01e-11 65.5
Msa0249370 AT5G29000.4 57.407 54 22 1 215 267 231 284 1.19e-11 67.0
Msa0249370 AT3G04450.3 55.556 54 23 1 215 267 238 291 1.35e-11 66.6
Msa0249370 AT5G29000.1 51.429 70 30 2 215 283 188 254 1.42e-11 67.4
Msa0249370 AT5G29000.3 51.429 70 30 2 215 283 188 254 1.42e-11 67.4
Msa0249370 AT2G01060.1 54.545 55 24 1 215 268 15 69 1.47e-11 66.2
Msa0249370 AT5G29000.2 51.429 70 30 2 215 283 231 297 1.66e-11 67.4
Msa0249370 AT3G04450.1 55.556 54 23 1 215 267 238 291 1.93e-11 67.4
Msa0249370 AT3G04450.4 55.556 54 23 1 215 267 198 251 1.97e-11 67.0
Msa0249370 AT3G04450.2 55.556 54 23 1 215 267 198 251 1.97e-11 67.0
Msa0249370 AT1G49560.1 43.210 81 42 2 214 290 191 271 2.31e-11 66.2
Msa0249370 AT5G06800.2 50.000 68 33 1 202 268 179 246 2.64e-11 66.6
Msa0249370 AT5G06800.1 50.000 68 33 1 202 268 179 246 2.73e-11 66.2
Msa0249370 AT2G38300.1 52.727 55 25 1 214 267 53 107 3.16e-11 65.9
Msa0249370 AT3G13040.3 53.571 56 25 1 214 268 240 295 3.35e-11 66.6
Msa0249370 AT3G13040.1 53.571 56 25 1 214 268 240 295 3.35e-11 66.6
Msa0249370 AT3G13040.2 53.571 56 25 1 214 268 240 295 3.35e-11 66.6
Msa0249370 AT2G06020.1 35.115 131 62 4 170 295 44 156 3.85e-11 65.1
Msa0249370 AT3G56380.2 32.061 131 75 2 21 137 20 150 5.40e-11 62.0
Msa0249370 AT2G40260.1 52.727 55 25 1 214 267 81 135 5.49e-11 65.5
Msa0249370 AT1G13300.1 41.892 74 42 1 200 272 166 239 6.80e-11 65.1

Find 183 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGCATCTCGGCACATTTC+TGG 0.114225 2_2:+36073605 None:intergenic
AATAATAATGCAGCTTTCTT+AGG 0.190771 2_2:+36076596 None:intergenic
TTGCTTCCACCAGAAATATT+AGG 0.214532 2_2:+36075205 None:intergenic
GTTGGATATGTTGAGGGTTT+TGG 0.226504 2_2:-36073249 Msa0249370:CDS
TCCTGTGTTCATTCTCTCTA+AGG 0.252203 2_2:-36071242 Msa0249370:three_prime_UTR
GATAAGGTCCCTAATATTTC+TGG 0.257219 2_2:-36075214 Msa0249370:CDS
TGCACCCATTATGTCTTCTA+AGG 0.258237 2_2:+36073224 None:intergenic
GACGAGAATTTCTCAACTTC+GGG 0.287871 2_2:+36073327 None:intergenic
TCCCAATCAAGCCATCTTCT+TGG 0.289220 2_2:+36073586 None:intergenic
TTCTGTTGGATCTGCTTCCT+TGG 0.307813 2_2:-36073871 Msa0249370:CDS
ACAAATTTCTTATGCAAATC+AGG 0.313939 2_2:+36075010 None:intergenic
TGAAGGGACGACTCGTGTTT+TGG 0.320959 2_2:+36073499 None:intergenic
TGCCAAGAAGATGGCTTGAT+TGG 0.323929 2_2:-36073588 Msa0249370:CDS
ATATAGACTCTATCTGAAAA+AGG 0.324190 2_2:-36074393 Msa0249370:CDS
ATTTCTCAACTTCGGGGTAC+TGG 0.340831 2_2:+36073334 None:intergenic
ATTTCCTGCTAGTGCTTTGC+CGG 0.341449 2_2:-36073757 Msa0249370:CDS
TACTAGCATGGTTGCTGGAC+TGG 0.346162 2_2:-36074357 Msa0249370:CDS
TGCTTCCACCAGAAATATTA+GGG 0.349156 2_2:+36075206 None:intergenic
GTTATGCTCCGCGACAAAAC+TGG 0.353541 2_2:-36073545 Msa0249370:CDS
CCATGGTGCATGTGACTATC+TGG 0.354596 2_2:-36075335 Msa0249370:CDS
CACTATTGTTTAGCTTAGAT+TGG 0.357267 2_2:+36074060 None:intergenic
ACAGTGCTGATCGGAATAAA+AGG 0.366820 2_2:-36075165 Msa0249370:CDS
TATTATTTCCAATTTCGAAT+AGG 0.373342 2_2:+36076632 None:intergenic
TTATCTTGTTCTAGTGTTGT+CGG 0.373558 2_2:-36075395 Msa0249370:intron
ATTAGGGACCTTATCCTCAT+TGG 0.379637 2_2:+36075222 None:intergenic
CACAATCACTGCTGCTTTGG+AGG 0.379911 2_2:-36073631 Msa0249370:CDS
TCTGTTGGATCTGCTTCCTT+GGG 0.381102 2_2:-36073870 Msa0249370:CDS
GGAAGCCTTGTTATCATCCT+TGG 0.385654 2_2:+36075243 None:intergenic
ATGAAATAAACTCCAGAGAT+AGG 0.391276 2_2:+36071482 None:intergenic
AAATGTAGCAAGCCATTTGC+AGG 0.393120 2_2:-36074777 Msa0249370:intron
CTAAGCTCTTCAAGTCGAAC+AGG 0.403595 2_2:+36075307 None:intergenic
AAACACAATCACTGCTGCTT+TGG 0.405385 2_2:-36073634 Msa0249370:CDS
AATCAAATGCATGATCCAAC+AGG 0.405727 2_2:+36071554 None:intergenic
TTTGGCACCTCAACCAGATC+TGG 0.406957 2_2:-36074281 Msa0249370:CDS
GAGAGTGAAGGGAGTGCAGA+TGG 0.407661 2_2:-36075082 Msa0249370:CDS
TATCTTGTTCTAGTGTTGTC+GGG 0.408272 2_2:-36075394 Msa0249370:intron
GCTTGCGATCCTTCCAGATC+TGG 0.414334 2_2:+36074268 None:intergenic
AACAAATAATTAAAGTCAAA+GGG 0.417835 2_2:-36076552 Msa0249370:five_prime_UTR
ATAATCGGTGTAGTGAAAAC+TGG 0.418658 2_2:-36073803 Msa0249370:CDS
GGAAACAGAAACATTACTAT+TGG 0.419569 2_2:-36073849 Msa0249370:CDS
CCTCATCTTCTCCAACTTGT+AGG 0.419938 2_2:+36073278 None:intergenic
GCAGTTACTACAGCTACTAA+TGG 0.421788 2_2:-36075656 Msa0249370:intron
CTCAAAACATCAACAACTCC+TGG 0.422296 2_2:-36074136 Msa0249370:CDS
AAGCTAAACAATAGTGCAAC+TGG 0.426000 2_2:-36074053 Msa0249370:CDS
TTCCTTGCAACAACAGATGA+TGG 0.430350 2_2:+36073937 None:intergenic
TGGAACCTTAGAAGACATAA+TGG 0.430422 2_2:-36073229 Msa0249370:CDS
CAAGGCTTCCAATGAGGATA+AGG 0.433857 2_2:-36075230 Msa0249370:CDS
TAATGGGTGCAATAGTCAAA+AGG 0.436630 2_2:-36073212 Msa0249370:CDS
TGTTAGCGATAAGAGGGCTT+TGG 0.437040 2_2:+36073679 None:intergenic
CTTCGGATGAGTGGAATAGA+TGG 0.438392 2_2:-36074314 Msa0249370:CDS
TTCTTATTTCATTAATGGGA+TGG 0.440165 2_2:-36071377 Msa0249370:three_prime_UTR
CCTGTGTTCATTCTCTCTAA+GGG 0.443163 2_2:-36071241 Msa0249370:three_prime_UTR
CATCATACTAGCATGGTTGC+TGG 0.444803 2_2:-36074362 Msa0249370:CDS
TTGAAACTTACTCCTATCTC+TGG 0.445248 2_2:-36071494 Msa0249370:three_prime_UTR
TGGAAGCAATCAGAACATAT+TGG 0.447324 2_2:-36075191 Msa0249370:CDS
GGGATACAGTGATACAAGTA+TGG 0.449701 2_2:-36075374 Msa0249370:CDS
TTAAATCAAATTGATTCCAC+TGG 0.450140 2_2:-36074020 Msa0249370:CDS
TTTGCTGCAAAGCAAGAAGA+AGG 0.454362 2_2:+36071328 None:intergenic
AACTTAAATCCATCCATGTC+AGG 0.455967 2_2:+36075563 None:intergenic
GGAACCTTAGAAGACATAAT+GGG 0.455999 2_2:-36073228 Msa0249370:CDS
AAAGCACTAGCAGGAAATTC+AGG 0.456039 2_2:+36073762 None:intergenic
AAACAAATAATTAAAGTCAA+AGG 0.456645 2_2:-36076553 Msa0249370:five_prime_UTR
TGATACAAGTATGGTATTCA+AGG 0.457007 2_2:-36075365 Msa0249370:CDS
CTTGCTGAATGCAAATATCA+TGG 0.457929 2_2:-36076263 Msa0249370:intron
GCCAAGACTTTGAGACAAGT+TGG 0.461455 2_2:+36076293 None:intergenic
ATGCAGCTTTCTTAGGAAGA+TGG 0.461869 2_2:+36076603 None:intergenic
GCCAAGAAGATGGCTTGATT+GGG 0.462950 2_2:-36073587 Msa0249370:CDS
ACTGGACTGTTAGCGATAAG+AGG 0.464251 2_2:+36073672 None:intergenic
ACTAGCATGGTTGCTGGACT+GGG 0.464924 2_2:-36074356 Msa0249370:CDS
TTGAAGAGCTTAGAAACATA+TGG 0.466760 2_2:-36075297 Msa0249370:CDS
CTTGAGCTGATGAATATTGA+AGG 0.466769 2_2:-36074812 Msa0249370:CDS
TCTTATTTCATTAATGGGAT+GGG 0.467227 2_2:-36071376 Msa0249370:three_prime_UTR
GCAAGAACACGCATACCAAC+AGG 0.467353 2_2:+36076329 None:intergenic
TGTCGCGGAGCATAACTTGA+AGG 0.467950 2_2:+36073552 None:intergenic
CTTCAATCCTTTGAACTCAC+AGG 0.468279 2_2:-36073481 Msa0249370:CDS
CCAAGACTTTGAGACAAGTT+GGG 0.470214 2_2:+36076294 None:intergenic
TGAGTTGGTAGGACTTGAAA+TGG 0.471217 2_2:-36075537 Msa0249370:CDS
AGAAGAAACCTCGTGTGGTT+TGG 0.471370 2_2:-36075036 Msa0249370:CDS
CCTCTCATGTTCAAGCCGGC+TGG 0.473952 2_2:+36074194 None:intergenic
TGACGAGAATTTCTCAACTT+CGG 0.474747 2_2:+36073326 None:intergenic
GTGGTAATGATTCTTACCTT+CGG 0.478612 2_2:-36074331 Msa0249370:CDS
GTCAGAAATCAGTCTTCTGT+TGG 0.479269 2_2:-36073885 Msa0249370:CDS
AAGATGATGAAGAGAGTGAA+GGG 0.479274 2_2:-36075093 Msa0249370:CDS
CTGTGAGTTCAAAGGATTGA+AGG 0.479684 2_2:+36073482 None:intergenic
TTTCTCAACTTCGGGGTACT+GGG 0.482057 2_2:+36073335 None:intergenic
TTAGATTGGTTAAGCTCAGT+TGG 0.482184 2_2:+36074074 None:intergenic
TTATTATTGTATCTAGAGAA+AGG 0.482587 2_2:+36071292 None:intergenic
CAGCAACCATGCTAGTATGA+TGG 0.485179 2_2:+36074363 None:intergenic
TTTCCAGACGAAAAGTCAAC+TGG 0.489789 2_2:+36073654 None:intergenic
CGAGGTTTCTTCTGTGATGA+CGG 0.491161 2_2:+36075046 None:intergenic
TCCCAAGTTGGATATGTTGA+GGG 0.496240 2_2:-36073255 Msa0249370:CDS
AACCCTCAACATATCCAACT+TGG 0.496341 2_2:+36073253 None:intergenic
AAGCCATCTTCTTGGCATCT+CGG 0.499185 2_2:+36073594 None:intergenic
ATCAAAGGAGAGATGAAGAT+GGG 0.500012 2_2:-36076367 Msa0249370:CDS
GCAAATTGAGATGACATTGA+TGG 0.500991 2_2:-36071603 Msa0249370:CDS
GCTTTGATTTGCAGAAATCC+AGG 0.502924 2_2:+36074118 None:intergenic
GTTTGTGCTGTTAATCAACT+TGG 0.503058 2_2:-36074989 Msa0249370:CDS
ATGGTTGCTGGACTGGGCGG+TGG 0.508241 2_2:-36074350 Msa0249370:CDS
AACAGAAACATTACTATTGG+CGG 0.510655 2_2:-36073846 Msa0249370:CDS
AGCAACCATGCTAGTATGAT+GGG 0.510988 2_2:+36074364 None:intergenic
TTCTGATTCAGCAAGAATCC+AGG 0.516369 2_2:-36071529 Msa0249370:three_prime_UTR
AGAATTTGTCAATGCCCTAC+TGG 0.521387 2_2:+36073452 None:intergenic
AATCAAAGGAGAGATGAAGA+TGG 0.521500 2_2:-36076368 Msa0249370:CDS
ATAGATGGATATGCAGACTT+TGG 0.523223 2_2:-36074299 Msa0249370:CDS
TGCTTCAGACTTTCACGATA+GGG 0.525622 2_2:-36073988 Msa0249370:CDS
CCCAACTTGTCTCAAAGTCT+TGG 0.525945 2_2:-36076294 Msa0249370:CDS
TTATGCTCCGCGACAAAACT+GGG 0.527456 2_2:-36073544 Msa0249370:CDS
TCACAACAGACACACAATGC+AGG 0.528194 2_2:-36073912 Msa0249370:CDS
GAAGATGATGAAGAGAGTGA+AGG 0.530545 2_2:-36075094 Msa0249370:CDS
GTCCCAAGTTGGATATGTTG+AGG 0.530635 2_2:-36073256 Msa0249370:CDS
AAGGAAGGAGCAAGATGAGG+AGG 0.530715 2_2:-36075131 Msa0249370:CDS
CTCACAGGTTTGTTCCAGTA+GGG 0.532258 2_2:-36073466 Msa0249370:CDS
CACGCATACCAACAGGAAAA+CGG 0.532394 2_2:+36076336 None:intergenic
AGATGGGTGTGGAGAATCAA+AGG 0.532717 2_2:-36076382 Msa0249370:CDS
AATGGGTGCAATAGTCAAAA+GGG 0.534269 2_2:-36073211 Msa0249370:intron
GTGCCGAGATGCCAAGAAGA+TGG 0.543806 2_2:-36073597 Msa0249370:CDS
AAACTGGGCAGAAAATAAAC+CGG 0.545815 2_2:-36073529 Msa0249370:CDS
CAAGAATAAAGACCTGCAAA+TGG 0.545943 2_2:+36074765 None:intergenic
TTTAAGTTGCTTGAGTTGGT+AGG 0.547724 2_2:-36075548 Msa0249370:CDS
CACGAATGATGCCTACAAGT+TGG 0.548868 2_2:-36073289 Msa0249370:CDS
ATAAAAGGCTCGGTAAAAGA+AGG 0.549420 2_2:-36075150 Msa0249370:CDS
TGGATTTAAGTTGCTTGAGT+TGG 0.549493 2_2:-36075552 Msa0249370:CDS
GAGGTTTCTTCTGTGATGAC+GGG 0.558825 2_2:+36075047 None:intergenic
GATTCTTACCTTCGGATGAG+TGG 0.560817 2_2:-36074323 Msa0249370:CDS
CATACCGGCAAAGCACTAGC+AGG 0.561071 2_2:+36073753 None:intergenic
CAAAGCTCAAGCTTATTACA+TGG 0.564099 2_2:-36074101 Msa0249370:CDS
AAGAAGGAAGGAGCAAGATG+AGG 0.564374 2_2:-36075134 Msa0249370:CDS
CTACCGAAAACTCCGCTCGA+TGG 0.564638 2_2:+36074227 None:intergenic
CTGCTTCAGACTTTCACGAT+AGG 0.566068 2_2:-36073989 Msa0249370:CDS
TGTATGAACTTACTGATGAC+AGG 0.566085 2_2:+36075509 None:intergenic
CAGATAGTCACATGCACCAT+GGG 0.568320 2_2:+36075336 None:intergenic
AATTCCTCTCATGTTCAAGC+CGG 0.569294 2_2:+36074190 None:intergenic
TGTTATGATGCATACCCTGT+TGG 0.570787 2_2:-36071569 Msa0249370:CDS
CTGTGTTCATTCTCTCTAAG+GGG 0.571198 2_2:-36071240 Msa0249370:three_prime_UTR
AACCATCATCTGTTGTTGCA+AGG 0.571223 2_2:-36073939 Msa0249370:CDS
GATACAAGTATGGTATTCAA+GGG 0.580166 2_2:-36075364 Msa0249370:CDS
CTGGACTGTTAGCGATAAGA+GGG 0.580850 2_2:+36073673 None:intergenic
AGTAATGTTTCTGTTTCCCA+AGG 0.584116 2_2:+36073854 None:intergenic
TAATGTTATTGAGAGGCAGT+TGG 0.591128 2_2:+36073712 None:intergenic
GTGGCTATGCCTGACATGGA+TGG 0.592957 2_2:-36075572 Msa0249370:CDS
GATCCTTCCAGATCTGGTTG+AGG 0.592986 2_2:+36074274 None:intergenic
ACCCTCAACATATCCAACTT+GGG 0.593353 2_2:+36073254 None:intergenic
GAACAAACCTGTGAGTTCAA+AGG 0.594050 2_2:+36073474 None:intergenic
GGGGTACTGGGCAACTGACG+TGG 0.594340 2_2:+36073347 None:intergenic
TTGAGCTGATGAATATTGAA+GGG 0.595042 2_2:-36074811 Msa0249370:CDS
ACTCCGCTCGATGGATATGA+CGG 0.596427 2_2:+36074236 None:intergenic
TAGCCACATCACTGATAACC+AGG 0.596968 2_2:+36075588 None:intergenic
CACAACAGACACACAATGCA+GGG 0.597049 2_2:-36073911 Msa0249370:CDS
TTATTGAAAGACTTGCATAC+CGG 0.597636 2_2:+36073738 None:intergenic
AGGGAGTGCAGATGGAGATG+AGG 0.602885 2_2:-36075074 Msa0249370:CDS
AAGGTCCCTAATATTTCTGG+TGG 0.603122 2_2:-36075211 Msa0249370:CDS
AAAGCAGTAATGTTATTGAG+AGG 0.604446 2_2:+36073705 None:intergenic
GAGAAGATGAGGTCCCAAGT+TGG 0.610844 2_2:-36073267 Msa0249370:CDS
ACTCACAGGTTTGTTCCAGT+AGG 0.610848 2_2:-36073467 Msa0249370:CDS
CATCTATTCCACTCATCCGA+AGG 0.612751 2_2:+36074315 None:intergenic
TGTGAGTTCAAAGGATTGAA+GGG 0.613107 2_2:+36073483 None:intergenic
TATTGGAGAACAGTGCTGAT+CGG 0.614955 2_2:-36075174 Msa0249370:CDS
GTATTCAAGGGTGTTACCCA+TGG 0.618028 2_2:-36075352 Msa0249370:CDS
CCAGATAGTCACATGCACCA+TGG 0.618479 2_2:+36075335 None:intergenic
GGTAGGCTGAATTCTCCAGC+CGG 0.622126 2_2:-36074209 Msa0249370:CDS
TGATGTGGCTATGCCTGACA+TGG 0.623238 2_2:-36075576 Msa0249370:CDS
AACTCCCCATCATACTAGCA+TGG 0.628311 2_2:-36074369 Msa0249370:CDS
GCTGATCGGAATAAAAGGCT+CGG 0.629794 2_2:-36075160 Msa0249370:CDS
AAGGCTCGGTAAAAGAAGGA+AGG 0.633186 2_2:-36075146 Msa0249370:CDS
ATTGAGATGACATTGATGGA+TGG 0.636234 2_2:-36071599 Msa0249370:CDS
CCTACAAGTTGGAGAAGATG+AGG 0.646079 2_2:-36073278 Msa0249370:CDS
TGAAGCAGCTGCAAATCCAG+TGG 0.648832 2_2:+36074004 None:intergenic
TAATTCCAAGGATGATAACA+AGG 0.654052 2_2:-36075248 Msa0249370:CDS
CCAGCCGGCTTGAACATGAG+AGG 0.656492 2_2:-36074194 Msa0249370:CDS
TCAAAGGAGAGATGAAGATG+GGG 0.663775 2_2:-36076366 Msa0249370:CDS
GCACCTCAACCAGATCTGGA+AGG 0.664461 2_2:-36074277 Msa0249370:CDS
TGATAACAAGGCTTCCAATG+AGG 0.667904 2_2:-36075236 Msa0249370:CDS
AGCATGGTTGCTGGACTGGG+CGG 0.674097 2_2:-36074353 Msa0249370:CDS
TCAGGAGACCAAACCACACG+AGG 0.674901 2_2:+36075028 None:intergenic
ACGAGAATTTCTCAACTTCG+GGG 0.680347 2_2:+36073328 None:intergenic
TGACCTGGTTATCAGTGATG+TGG 0.683171 2_2:-36075591 Msa0249370:CDS
AAACAGAAAGAACTATGACC+TGG 0.684794 2_2:-36075606 Msa0249370:CDS
GCAACCATGCTAGTATGATG+GGG 0.686090 2_2:+36074365 None:intergenic
ATCAAATGCATGATCCAACA+GGG 0.688787 2_2:+36071555 None:intergenic
CCCTTAGAGAGAATGAACAC+AGG 0.699524 2_2:+36071241 None:intergenic
TTGCCGTCATATCCATCGAG+CGG 0.699753 2_2:-36074239 Msa0249370:CDS
ATCACAGAAGAAACCTCGTG+TGG 0.712689 2_2:-36075041 Msa0249370:CDS
CGATGGATATGACGGCAATG+TGG 0.745057 2_2:+36074244 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTATATATTTTTTTTTT+AGG - chr2_2:36072174-36072193 Msa0249370:intron 0.0%
!!! ATATTTTTTTTTTAGGTTTT+TGG - chr2_2:36072181-36072200 Msa0249370:intron 10.0%
!! TAAAAAATAATTTCATGATT+TGG + chr2_2:36073208-36073227 None:intergenic 10.0%
!!! TTTTATTTATTTTGGTATAA+CGG - chr2_2:36074936-36074955 Msa0249370:intron 10.0%
!! TTAAAATAAAAAGACAATAA+AGG + chr2_2:36075204-36075223 None:intergenic 10.0%
!! AAACAAATAATTAAAGTCAA+AGG - chr2_2:36071357-36071376 Msa0249370:three_prime_UTR 15.0%
!! AACAAATAATTAAAGTCAAA+GGG - chr2_2:36071358-36071377 Msa0249370:three_prime_UTR 15.0%
!! TGAACTAAAACATAAAATTA+AGG + chr2_2:36071709-36071728 None:intergenic 15.0%
!! TTTGAGAAAATCATATAATT+CGG + chr2_2:36071876-36071895 None:intergenic 15.0%
!!! TGATTTTCTCAAATTATTAA+CGG - chr2_2:36071883-36071902 Msa0249370:intron 15.0%
!! ATAAATGTTAATTCATCATT+TGG + chr2_2:36073296-36073315 None:intergenic 15.0%
!!! CTAATTTTTTGGATTATAAT+CGG - chr2_2:36074092-36074111 Msa0249370:CDS 15.0%
!!! AAATAAATAAAATGATAACG+CGG + chr2_2:36074928-36074947 None:intergenic 15.0%
!!! CGTTATCATTTTATTTATTT+TGG - chr2_2:36074928-36074947 Msa0249370:intron 15.0%
!! AAATAATGCAAAAGAATTTA+TGG - chr2_2:36075078-36075097 Msa0249370:CDS 15.0%
!!! GTTCTATTAATTTTGTTTAA+AGG - chr2_2:36075321-36075340 Msa0249370:CDS 15.0%
!! TAAAATTACAAAAAGCTATA+TGG + chr2_2:36076158-36076177 None:intergenic 15.0%
!!! TATAGCTTTTTGTAATTTTA+AGG - chr2_2:36076158-36076177 Msa0249370:intron 15.0%
!!! ATAGCTTTTTGTAATTTTAA+GGG - chr2_2:36076159-36076178 Msa0249370:intron 15.0%
!!! ACATTTTCTTATTTCATTAA+TGG - chr2_2:36076528-36076547 Msa0249370:five_prime_UTR 15.0%
!!! CATTTTCTTATTTCATTAAT+GGG - chr2_2:36076529-36076548 Msa0249370:five_prime_UTR 15.0%
!! TGATATAAAAAAGTTAGACA+TGG - chr2_2:36071245-36071264 Msa0249370:three_prime_UTR 20.0%
!!! ATTATTTTCCTATTCGAAAT+TGG - chr2_2:36071270-36071289 Msa0249370:three_prime_UTR 20.0%
!! TATTATTTCCAATTTCGAAT+AGG + chr2_2:36071281-36071300 None:intergenic 20.0%
!!! TCTGTTTTGTTTTGTTTTAT+TGG - chr2_2:36071474-36071493 Msa0249370:three_prime_UTR 20.0%
!!! TTGTTTCTTTATTTTGAAGA+TGG - chr2_2:36071511-36071530 Msa0249370:three_prime_UTR 20.0%
!!! TGTTTCTTTATTTTGAAGAT+GGG - chr2_2:36071512-36071531 Msa0249370:three_prime_UTR 20.0%
!!! TACTAAGTTCTAAAGTAATA+AGG + chr2_2:36071758-36071777 None:intergenic 20.0%
!! TCTTAAATTATTATACGTGT+CGG + chr2_2:36072036-36072055 None:intergenic 20.0%
!!! TTACATTGCTATTAGAATTT+AGG - chr2_2:36072208-36072227 Msa0249370:intron 20.0%
!! CATTCTTCTATTTACAATAA+CGG - chr2_2:36072447-36072466 Msa0249370:intron 20.0%
!! ATTCTTCTATTTACAATAAC+GGG - chr2_2:36072448-36072467 Msa0249370:intron 20.0%
!!! TGGAATTAGTTTTTTTCTTT+CGG + chr2_2:36072650-36072669 None:intergenic 20.0%
!! AAAGAAAAAAACTAATTCCA+AGG - chr2_2:36072650-36072669 Msa0249370:intron 20.0%
!!! CATGAGAATAAATCTTTTAT+TGG + chr2_2:36073045-36073064 None:intergenic 20.0%
!!! ATAATTTCATGATTTGGAAA+AGG + chr2_2:36073202-36073221 None:intergenic 20.0%
!!! AGTCTACTACATTATTTTTT+TGG - chr2_2:36074809-36074828 Msa0249370:CDS 20.0%
!!! TGAATTTTGAATACTTCTTT+TGG - chr2_2:36074964-36074983 Msa0249370:intron 20.0%
!!! TGTATCTAGTATTATTTCTT+TGG - chr2_2:36074994-36075013 Msa0249370:CDS 20.0%
!!! TCTTTTGCATTATTTCTAAA+AGG + chr2_2:36075073-36075092 None:intergenic 20.0%
!!! TTTTAACTTAATTGTATGCA+AGG - chr2_2:36075218-36075237 Msa0249370:CDS 20.0%
!! AATGATGAATGTAATTTAGA+CGG - chr2_2:36075344-36075363 Msa0249370:CDS 20.0%
!! TCTTAACATGAAAGATAAAA+GGG + chr2_2:36075921-36075940 None:intergenic 20.0%
!! ATCTTAACATGAAAGATAAA+AGG + chr2_2:36075922-36075941 None:intergenic 20.0%
!! TCTATAATGTTAGATACTAT+AGG - chr2_2:36076109-36076128 Msa0249370:intron 20.0%
!!! TCACTTTTATGTTGTTATTA+TGG - chr2_2:36076480-36076499 Msa0249370:intron 20.0%
!! TTATTATTGTATCTAGAGAA+AGG + chr2_2:36076621-36076640 None:intergenic 20.0%
! AATAATAATGCAGCTTTCTT+AGG + chr2_2:36071317-36071336 None:intergenic 25.0%
! TTTAGTGTAATCATTTGTGT+CGG - chr2_2:36072067-36072086 Msa0249370:intron 25.0%
!!! TAGAATTTAGGTTTGATTTG+TGG - chr2_2:36072220-36072239 Msa0249370:intron 25.0%
! ACAAATTTCTTATGCAAATC+AGG + chr2_2:36072903-36072922 None:intergenic 25.0%
! ATTTCGTCATAAAAATGAAG+AGG + chr2_2:36073437-36073456 None:intergenic 25.0%
! ATATAGACTCTATCTGAAAA+AGG - chr2_2:36073517-36073536 Msa0249370:CDS 25.0%
!! TTAAATCAAATTGATTCCAC+TGG - chr2_2:36073890-36073909 Msa0249370:CDS 25.0%
!! TCTTTTGTTGATCATGTATA+TGG - chr2_2:36074535-36074554 Msa0249370:intron 25.0%
!! TCAAAAGGGTATGATTAAAT+TGG - chr2_2:36074713-36074732 Msa0249370:intron 25.0%
!! ATTTAGTTTAGTTTAGTCGA+CGG - chr2_2:36074885-36074904 Msa0249370:intron 25.0%
! TATTGAAATTATGCAGACTA+TGG + chr2_2:36075039-36075058 None:intergenic 25.0%
! AATGCAAATTTGTCTACATT+TGG + chr2_2:36075132-36075151 None:intergenic 25.0%
! TTCTTCAATAACTATGAAAC+AGG - chr2_2:36075263-36075282 Msa0249370:CDS 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr2_2:36075491-36075510 Msa0249370:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG + chr2_2:36075667-36075686 None:intergenic 25.0%
!! TTATTTGAAACTATCTTGCA+GGG + chr2_2:36075789-36075808 None:intergenic 25.0%
!! ATTATTTGAAACTATCTTGC+AGG + chr2_2:36075790-36075809 None:intergenic 25.0%
! TGCAAGATAGTTTCAAATAA+TGG - chr2_2:36075789-36075808 Msa0249370:intron 25.0%
!!! GATAGTTTCAAATAATGGAT+TGG - chr2_2:36075794-36075813 Msa0249370:intron 25.0%
!!! TTTCAAATAATGGATTGGAT+TGG - chr2_2:36075799-36075818 Msa0249370:intron 25.0%
! ACATCAACCTTATATATTAG+TGG + chr2_2:36075835-36075854 None:intergenic 25.0%
! AGATAAAAGGGTAGATATAA+TGG + chr2_2:36075909-36075928 None:intergenic 25.0%
!!! TAAATGATGTGGTTTTAACT+TGG - chr2_2:36076086-36076105 Msa0249370:intron 25.0%
! ATATATTTGAATTCTCACCT+TGG - chr2_2:36076182-36076201 Msa0249370:intron 25.0%
!! TTCTTATTTCATTAATGGGA+TGG - chr2_2:36076533-36076552 Msa0249370:five_prime_UTR 25.0%
!! TCTTATTTCATTAATGGGAT+GGG - chr2_2:36076534-36076553 Msa0249370:five_prime_UTR 25.0%
! TTTTGGTCTAGAAAAAGTGA+AGG - chr2_2:36071396-36071415 Msa0249370:three_prime_UTR 30.0%
!! AAGTTCTAAAGTAATAAGGC+TGG + chr2_2:36071754-36071773 None:intergenic 30.0%
TCTCAAATTATTAACGGTGT+TGG - chr2_2:36071889-36071908 Msa0249370:intron 30.0%
TTGATGCACTAAAAATGTTG+AGG - chr2_2:36072279-36072298 Msa0249370:intron 30.0%
TGATGCACTAAAAATGTTGA+GGG - chr2_2:36072280-36072299 Msa0249370:intron 30.0%
!! AATAACGGGTTGAATTGAAT+CGG - chr2_2:36072462-36072481 Msa0249370:intron 30.0%
! ATTGAATCGGTTTATTGACT+CGG - chr2_2:36072475-36072494 Msa0249370:intron 30.0%
TTATCTTGTTCTAGTGTTGT+CGG - chr2_2:36072515-36072534 Msa0249370:intron 30.0%
TGATACAAGTATGGTATTCA+AGG - chr2_2:36072545-36072564 Msa0249370:intron 30.0%
GATACAAGTATGGTATTCAA+GGG - chr2_2:36072546-36072565 Msa0249370:intron 30.0%
TTGAAGAGCTTAGAAACATA+TGG - chr2_2:36072613-36072632 Msa0249370:intron 30.0%
TAATTCCAAGGATGATAACA+AGG - chr2_2:36072662-36072681 Msa0249370:intron 30.0%
AACAACTTCATATGTAGACA+TGG - chr2_2:36073007-36073026 Msa0249370:intron 30.0%
! ATCAGCTCAAGTATTTTCTT+CGG + chr2_2:36073089-36073108 None:intergenic 30.0%
TTGAGCTGATGAATATTGAA+GGG - chr2_2:36073099-36073118 Msa0249370:intron 30.0%
AATAAACTTGTCTAGTCAGT+AGG + chr2_2:36073382-36073401 None:intergenic 30.0%
! CACTATTGTTTAGCTTAGAT+TGG + chr2_2:36073853-36073872 None:intergenic 30.0%
GGAAACAGAAACATTACTAT+TGG - chr2_2:36074061-36074080 Msa0249370:CDS 30.0%
AACAGAAACATTACTATTGG+CGG - chr2_2:36074064-36074083 Msa0249370:CDS 30.0%
TTATTGAAAGACTTGCATAC+CGG + chr2_2:36074175-36074194 None:intergenic 30.0%
AAAGCAGTAATGTTATTGAG+AGG + chr2_2:36074208-36074227 None:intergenic 30.0%
GTCTGCATAATTTCAATATC+AGG - chr2_2:36075041-36075060 Msa0249370:CDS 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr2_2:36075487-36075506 None:intergenic 30.0%
TTGATCTACTCTTCTTACAA+CGG + chr2_2:36075551-36075570 None:intergenic 30.0%
TGTAAGAAGAGTAGATCAAA+TGG - chr2_2:36075552-36075571 Msa0249370:CDS 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr2_2:36075610-36075629 None:intergenic 30.0%
! TTTTCGAATGGTTTCTCTAA+TGG + chr2_2:36075620-36075639 None:intergenic 30.0%
AACCATTCGAAAAGATTTAG+AGG - chr2_2:36075627-36075646 Msa0249370:CDS 30.0%
! TGGTTTTTGATAGAACACTA+TGG - chr2_2:36075671-36075690 Msa0249370:intron 30.0%
ATGTTAAGATCATATCTCTC+AGG - chr2_2:36075932-36075951 Msa0249370:intron 30.0%
! TGATTTTGTGCTAAATGATG+TGG - chr2_2:36076075-36076094 Msa0249370:intron 30.0%
! TTTCAAGATTTTATTGCTCC+TGG + chr2_2:36076402-36076421 None:intergenic 30.0%
ATGAAATAAACTCCAGAGAT+AGG + chr2_2:36076431-36076450 None:intergenic 30.0%
! GGTTTTTGTCACTGTTCTTT+TGG - chr2_2:36071379-36071398 Msa0249370:three_prime_UTR 35.0%
!!! CTTTATTTTGAAGATGGGTG+TGG - chr2_2:36071517-36071536 Msa0249370:three_prime_UTR 35.0%
AATCAAAGGAGAGATGAAGA+TGG - chr2_2:36071542-36071561 Msa0249370:exon 35.0%
ATCAAAGGAGAGATGAAGAT+GGG - chr2_2:36071543-36071562 Msa0249370:exon 35.0%
CTTGCTGAATGCAAATATCA+TGG - chr2_2:36071647-36071666 Msa0249370:intron 35.0%
ACAGACACACTATTTCGATT+AGG - chr2_2:36071794-36071813 Msa0249370:intron 35.0%
GTAACTATATGTGTCAGTGT+CGG + chr2_2:36071852-36071871 None:intergenic 35.0%
AAATCTATGAAGCACGGATA+CGG + chr2_2:36071926-36071945 None:intergenic 35.0%
GTAGCAAAATCTATGAAGCA+CGG + chr2_2:36071932-36071951 None:intergenic 35.0%
AAACAGAAAGAACTATGACC+TGG - chr2_2:36072304-36072323 Msa0249370:intron 35.0%
AACTTAAATCCATCCATGTC+AGG + chr2_2:36072350-36072369 None:intergenic 35.0%
!! TGGATTTAAGTTGCTTGAGT+TGG - chr2_2:36072358-36072377 Msa0249370:intron 35.0%
!! TTTAAGTTGCTTGAGTTGGT+AGG - chr2_2:36072362-36072381 Msa0249370:intron 35.0%
TGTATGAACTTACTGATGAC+AGG + chr2_2:36072404-36072423 None:intergenic 35.0%
TATCTTGTTCTAGTGTTGTC+GGG - chr2_2:36072516-36072535 Msa0249370:intron 35.0%
GATAAGGTCCCTAATATTTC+TGG - chr2_2:36072696-36072715 Msa0249370:intron 35.0%
TGCTTCCACCAGAAATATTA+GGG + chr2_2:36072707-36072726 None:intergenic 35.0%
TTGCTTCCACCAGAAATATT+AGG + chr2_2:36072708-36072727 None:intergenic 35.0%
TGGAAGCAATCAGAACATAT+TGG - chr2_2:36072719-36072738 Msa0249370:intron 35.0%
! ATAAAAGGCTCGGTAAAAGA+AGG - chr2_2:36072760-36072779 Msa0249370:intron 35.0%
AAGATGATGAAGAGAGTGAA+GGG - chr2_2:36072817-36072836 Msa0249370:intron 35.0%
! GTTTGTGCTGTTAATCAACT+TGG - chr2_2:36072921-36072940 Msa0249370:intron 35.0%
!! ATTCTCATGTTTGTTGTTGC+AGG - chr2_2:36073056-36073075 Msa0249370:intron 35.0%
!! TTCTCATGTTTGTTGTTGCA+GGG - chr2_2:36073057-36073076 Msa0249370:intron 35.0%
CTTGAGCTGATGAATATTGA+AGG - chr2_2:36073098-36073117 Msa0249370:intron 35.0%
CAAGAATAAAGACCTGCAAA+TGG + chr2_2:36073148-36073167 None:intergenic 35.0%
AACGATTATGGTGACTACAA+AGG + chr2_2:36073171-36073190 None:intergenic 35.0%
AAGGCTAAACAGAACGATTA+TGG + chr2_2:36073183-36073202 None:intergenic 35.0%
! GTGGTAATGATTCTTACCTT+CGG - chr2_2:36073579-36073598 Msa0249370:CDS 35.0%
ATAGATGGATATGCAGACTT+TGG - chr2_2:36073611-36073630 Msa0249370:CDS 35.0%
!!! TTGATGTTTTGAGACTGAAC+AGG + chr2_2:36073767-36073786 None:intergenic 35.0%
CAAAGCTCAAGCTTATTACA+TGG - chr2_2:36073809-36073828 Msa0249370:CDS 35.0%
! TTAGATTGGTTAAGCTCAGT+TGG + chr2_2:36073839-36073858 None:intergenic 35.0%
AAGCTAAACAATAGTGCAAC+TGG - chr2_2:36073857-36073876 Msa0249370:CDS 35.0%
! AGTAATGTTTCTGTTTCCCA+AGG + chr2_2:36074059-36074078 None:intergenic 35.0%
!!! TGGCGGTTCTTCTAATTTTT+TGG - chr2_2:36074081-36074100 Msa0249370:CDS 35.0%
ATAATCGGTGTAGTGAAAAC+TGG - chr2_2:36074107-36074126 Msa0249370:CDS 35.0%
TAATGTTATTGAGAGGCAGT+TGG + chr2_2:36074201-36074220 None:intergenic 35.0%
AAACTGGGCAGAAAATAAAC+CGG - chr2_2:36074381-36074400 Msa0249370:CDS 35.0%
TGTGAGTTCAAAGGATTGAA+GGG + chr2_2:36074430-36074449 None:intergenic 35.0%
TGACGAGAATTTCTCAACTT+CGG + chr2_2:36074587-36074606 None:intergenic 35.0%
TGGAACCTTAGAAGACATAA+TGG - chr2_2:36074681-36074700 Msa0249370:intron 35.0%
GGAACCTTAGAAGACATAAT+GGG - chr2_2:36074682-36074701 Msa0249370:intron 35.0%
! TAATGGGTGCAATAGTCAAA+AGG - chr2_2:36074698-36074717 Msa0249370:intron 35.0%
AATGGGTGCAATAGTCAAAA+GGG - chr2_2:36074699-36074718 Msa0249370:intron 35.0%
GTAGACTAGAGCAAGAAAAA+AGG + chr2_2:36074796-36074815 None:intergenic 35.0%
TGGATTGAAAGTTTAGTCTG+CGG - chr2_2:36074829-36074848 Msa0249370:CDS 35.0%
! ATAAAGGTGTATGTAACCAG+AGG + chr2_2:36075188-36075207 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr2_2:36075480-36075499 Msa0249370:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr2_2:36075500-36075519 Msa0249370:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr2_2:36075505-36075524 Msa0249370:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr2_2:36075555-36075574 Msa0249370:CDS 35.0%
! GACCTCTAAATCTTTTCGAA+TGG + chr2_2:36075632-36075651 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr2_2:36075639-36075658 Msa0249370:CDS 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr2_2:36075651-36075670 Msa0249370:CDS 35.0%
! TGGTTGTTGTTGTTGTTGTA+AGG - chr2_2:36075739-36075758 Msa0249370:intron 35.0%
! GGTTGTTGTTGTTGTTGTAA+GGG - chr2_2:36075740-36075759 Msa0249370:intron 35.0%
! GTTGTTGTTGTTGTTGTAAG+GGG - chr2_2:36075741-36075760 Msa0249370:intron 35.0%
GCAAGCACCACTAATATATA+AGG - chr2_2:36075825-36075844 Msa0249370:intron 35.0%
!! AGGTTGATGTACTAATTTGC+TGG - chr2_2:36075845-36075864 Msa0249370:intron 35.0%
AGGACATACATTCAAATCCA+AGG + chr2_2:36076202-36076221 None:intergenic 35.0%
CTTACAATGTCTTAGAGAGA+TGG + chr2_2:36076231-36076250 None:intergenic 35.0%
CATGATAGACTTTGTAATGC+AGG - chr2_2:36076283-36076302 Msa0249370:CDS 35.0%
GCAAATTGAGATGACATTGA+TGG - chr2_2:36076307-36076326 Msa0249370:CDS 35.0%
ATTGAGATGACATTGATGGA+TGG - chr2_2:36076311-36076330 Msa0249370:CDS 35.0%
ATCAAATGCATGATCCAACA+GGG + chr2_2:36076358-36076377 None:intergenic 35.0%
AATCAAATGCATGATCCAAC+AGG + chr2_2:36076359-36076378 None:intergenic 35.0%
TTGAAACTTACTCCTATCTC+TGG - chr2_2:36076416-36076435 Msa0249370:intron 35.0%
CAAGAAGAAGGAAAAAGAGA+CGG + chr2_2:36076573-36076592 None:intergenic 35.0%
ATGCAGCTTTCTTAGGAAGA+TGG + chr2_2:36071310-36071329 None:intergenic 40.0%
AGAGCAGAACATAGAGTAAG+AGG - chr2_2:36071431-36071450 Msa0249370:three_prime_UTR 40.0%
TCAAAGGAGAGATGAAGATG+GGG - chr2_2:36071544-36071563 Msa0249370:exon 40.0%
!! CCAAGACTTTGAGACAAGTT+GGG + chr2_2:36071619-36071638 None:intergenic 40.0%
!! GACTTTTTCCCTATGAAGCT+TGG - chr2_2:36071968-36071987 Msa0249370:intron 40.0%
ACTTGTGTCCAAGCTTCATA+GGG + chr2_2:36071979-36071998 None:intergenic 40.0%
! GTAATCATTTGTGTCGGTGT+CGG - chr2_2:36072073-36072092 Msa0249370:intron 40.0%
GCAGTTACTACAGCTACTAA+TGG - chr2_2:36072254-36072273 Msa0249370:intron 40.0%
!! TGAGTTGGTAGGACTTGAAA+TGG - chr2_2:36072373-36072392 Msa0249370:intron 40.0%
GGGATACAGTGATACAAGTA+TGG - chr2_2:36072536-36072555 Msa0249370:intron 40.0%
TGATAACAAGGCTTCCAATG+AGG - chr2_2:36072674-36072693 Msa0249370:intron 40.0%
ATTAGGGACCTTATCCTCAT+TGG + chr2_2:36072691-36072710 None:intergenic 40.0%
!! AAGGTCCCTAATATTTCTGG+TGG - chr2_2:36072699-36072718 Msa0249370:intron 40.0%
!! TATTGGAGAACAGTGCTGAT+CGG - chr2_2:36072736-36072755 Msa0249370:intron 40.0%
!! ACAGTGCTGATCGGAATAAA+AGG - chr2_2:36072745-36072764 Msa0249370:intron 40.0%
GAAGATGATGAAGAGAGTGA+AGG - chr2_2:36072816-36072835 Msa0249370:intron 40.0%
!! TCTCATGTTTGTTGTTGCAG+GGG - chr2_2:36073058-36073077 Msa0249370:intron 40.0%
!!! ATGGCTTGCTACATTTTCTC+TGG + chr2_2:36073129-36073148 None:intergenic 40.0%
AAATGTAGCAAGCCATTTGC+AGG - chr2_2:36073133-36073152 Msa0249370:intron 40.0%
AGCAACCATGCTAGTATGAT+GGG + chr2_2:36073549-36073568 None:intergenic 40.0%
AATTCCTCTCATGTTCAAGC+CGG + chr2_2:36073723-36073742 None:intergenic 40.0%
CTCAAAACATCAACAACTCC+TGG - chr2_2:36073774-36073793 Msa0249370:CDS 40.0%
!! GCTTTGATTTGCAGAAATCC+AGG + chr2_2:36073795-36073814 None:intergenic 40.0%
TGCTTCAGACTTTCACGATA+GGG - chr2_2:36073922-36073941 Msa0249370:CDS 40.0%
AACCATCATCTGTTGTTGCA+AGG - chr2_2:36073971-36073990 Msa0249370:CDS 40.0%
TTCCTTGCAACAACAGATGA+TGG + chr2_2:36073976-36073995 None:intergenic 40.0%
GTCAGAAATCAGTCTTCTGT+TGG - chr2_2:36074025-36074044 Msa0249370:CDS 40.0%
! AAAGCACTAGCAGGAAATTC+AGG + chr2_2:36074151-36074170 None:intergenic 40.0%
TTTCCAGACGAAAAGTCAAC+TGG + chr2_2:36074259-36074278 None:intergenic 40.0%
! AAACACAATCACTGCTGCTT+TGG - chr2_2:36074276-36074295 Msa0249370:CDS 40.0%
CTGTGAGTTCAAAGGATTGA+AGG + chr2_2:36074431-36074450 None:intergenic 40.0%
CTTCAATCCTTTGAACTCAC+AGG - chr2_2:36074429-36074448 Msa0249370:intron 40.0%
GAACAAACCTGTGAGTTCAA+AGG + chr2_2:36074439-36074458 None:intergenic 40.0%
AGAATTTGTCAATGCCCTAC+TGG + chr2_2:36074461-36074480 None:intergenic 40.0%
! TGCTGCAGACTGTTTTACTT+TGG + chr2_2:36074501-36074520 None:intergenic 40.0%
ACGAGAATTTCTCAACTTCG+GGG + chr2_2:36074585-36074604 None:intergenic 40.0%
GACGAGAATTTCTCAACTTC+GGG + chr2_2:36074586-36074605 None:intergenic 40.0%
! TCCCAAGTTGGATATGTTGA+GGG - chr2_2:36074655-36074674 Msa0249370:intron 40.0%
ACCCTCAACATATCCAACTT+GGG + chr2_2:36074659-36074678 None:intergenic 40.0%
AACCCTCAACATATCCAACT+TGG + chr2_2:36074660-36074679 None:intergenic 40.0%
! GTTGGATATGTTGAGGGTTT+TGG - chr2_2:36074661-36074680 Msa0249370:intron 40.0%
TGCACCCATTATGTCTTCTA+AGG + chr2_2:36074689-36074708 None:intergenic 40.0%
! TCTGCTCTTATGTTTTCCTC+TGG - chr2_2:36075169-36075188 Msa0249370:CDS 40.0%
! AGACTAGCTAGGATAGGATT+AGG - chr2_2:36075427-36075446 Msa0249370:intron 40.0%
TCTTCTTACAACGGCATCTA+CGG + chr2_2:36075542-36075561 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr2_2:36075580-36075599 Msa0249370:CDS 40.0%
!! GATGTACTAATTTGCTGGCA+TGG - chr2_2:36075850-36075869 Msa0249370:intron 40.0%
TACTATAGGTGTTAGTGCAC+TGG - chr2_2:36076123-36076142 Msa0249370:intron 40.0%
TCTTAGAGAGATGGATGACA+AGG + chr2_2:36076222-36076241 None:intergenic 40.0%
TGTTATGATGCATACCCTGT+TGG - chr2_2:36076341-36076360 Msa0249370:CDS 40.0%
TTCTGATTCAGCAAGAATCC+AGG - chr2_2:36076381-36076400 Msa0249370:CDS 40.0%
TTTGCTGCAAAGCAAGAAGA+AGG + chr2_2:36076585-36076604 None:intergenic 40.0%
TCCTGTGTTCATTCTCTCTA+AGG - chr2_2:36076668-36076687 Msa0249370:five_prime_UTR 40.0%
CCTGTGTTCATTCTCTCTAA+GGG - chr2_2:36076669-36076688 Msa0249370:five_prime_UTR 40.0%
CTGTGTTCATTCTCTCTAAG+GGG - chr2_2:36076670-36076689 Msa0249370:five_prime_UTR 40.0%
AGATGGGTGTGGAGAATCAA+AGG - chr2_2:36071528-36071547 Msa0249370:three_prime_UTR 45.0%
CACGCATACCAACAGGAAAA+CGG + chr2_2:36071577-36071596 None:intergenic 45.0%
CCCAACTTGTCTCAAAGTCT+TGG - chr2_2:36071616-36071635 Msa0249370:intron 45.0%
!! GCCAAGACTTTGAGACAAGT+TGG + chr2_2:36071620-36071639 None:intergenic 45.0%
GACTTGTGTCCAAGCTTCAT+AGG + chr2_2:36071980-36071999 None:intergenic 45.0%
! TATTATACGTGTCGGCGTGT+AGG + chr2_2:36072028-36072047 None:intergenic 45.0%
ATCGGGATACACATTATCCG+AGG - chr2_2:36072101-36072120 Msa0249370:intron 45.0%
!! TGTCCGTGCTTGATAGCTTT+TGG - chr2_2:36072126-36072145 Msa0249370:intron 45.0%
GAGCCAAAAGCTATCAAGCA+CGG + chr2_2:36072132-36072151 None:intergenic 45.0%
TGACCTGGTTATCAGTGATG+TGG - chr2_2:36072319-36072338 Msa0249370:intron 45.0%
TAGCCACATCACTGATAACC+AGG + chr2_2:36072325-36072344 None:intergenic 45.0%
!! GTATTCAAGGGTGTTACCCA+TGG - chr2_2:36072558-36072577 Msa0249370:intron 45.0%
CAGATAGTCACATGCACCAT+GGG + chr2_2:36072577-36072596 None:intergenic 45.0%
CTAAGCTCTTCAAGTCGAAC+AGG + chr2_2:36072606-36072625 None:intergenic 45.0%
!! GGAAGCCTTGTTATCATCCT+TGG + chr2_2:36072670-36072689 None:intergenic 45.0%
CAAGGCTTCCAATGAGGATA+AGG - chr2_2:36072680-36072699 Msa0249370:intron 45.0%
GCTGATCGGAATAAAAGGCT+CGG - chr2_2:36072750-36072769 Msa0249370:intron 45.0%
! AAGGCTCGGTAAAAGAAGGA+AGG - chr2_2:36072764-36072783 Msa0249370:intron 45.0%
AAGAAGGAAGGAGCAAGATG+AGG - chr2_2:36072776-36072795 Msa0249370:intron 45.0%
GAGGTTTCTTCTGTGATGAC+GGG + chr2_2:36072866-36072885 None:intergenic 45.0%
CGAGGTTTCTTCTGTGATGA+CGG + chr2_2:36072867-36072886 None:intergenic 45.0%
ATCACAGAAGAAACCTCGTG+TGG - chr2_2:36072869-36072888 Msa0249370:intron 45.0%
AGAAGAAACCTCGTGTGGTT+TGG - chr2_2:36072874-36072893 Msa0249370:intron 45.0%
!! CAAGTCTCAAAAGCGTCAAG+AGG + chr2_2:36073341-36073360 None:intergenic 45.0%
AACTCCCCATCATACTAGCA+TGG - chr2_2:36073541-36073560 Msa0249370:CDS 45.0%
GCAACCATGCTAGTATGATG+GGG + chr2_2:36073548-36073567 None:intergenic 45.0%
CAGCAACCATGCTAGTATGA+TGG + chr2_2:36073550-36073569 None:intergenic 45.0%
CATCATACTAGCATGGTTGC+TGG - chr2_2:36073548-36073567 Msa0249370:CDS 45.0%
GATTCTTACCTTCGGATGAG+TGG - chr2_2:36073587-36073606 Msa0249370:CDS 45.0%
CATCTATTCCACTCATCCGA+AGG + chr2_2:36073598-36073617 None:intergenic 45.0%
CTTCGGATGAGTGGAATAGA+TGG - chr2_2:36073596-36073615 Msa0249370:CDS 45.0%
! TATCCATCGAGCGGAGTTTT+CGG - chr2_2:36073680-36073699 Msa0249370:CDS 45.0%
CTGCTTCAGACTTTCACGAT+AGG - chr2_2:36073921-36073940 Msa0249370:CDS 45.0%
TCACAACAGACACACAATGC+AGG - chr2_2:36073998-36074017 Msa0249370:CDS 45.0%
CACAACAGACACACAATGCA+GGG - chr2_2:36073999-36074018 Msa0249370:CDS 45.0%
TTCTGTTGGATCTGCTTCCT+TGG - chr2_2:36074039-36074058 Msa0249370:CDS 45.0%
TCTGTTGGATCTGCTTCCTT+GGG - chr2_2:36074040-36074059 Msa0249370:CDS 45.0%
ATTTCCTGCTAGTGCTTTGC+CGG - chr2_2:36074153-36074172 Msa0249370:CDS 45.0%
TGTTAGCGATAAGAGGGCTT+TGG + chr2_2:36074234-36074253 None:intergenic 45.0%
CTGGACTGTTAGCGATAAGA+GGG + chr2_2:36074240-36074259 None:intergenic 45.0%
ACTGGACTGTTAGCGATAAG+AGG + chr2_2:36074241-36074260 None:intergenic 45.0%
!! AGTCCAGTTGACTTTTCGTC+TGG - chr2_2:36074253-36074272 Msa0249370:CDS 45.0%
AAGCCATCTTCTTGGCATCT+CGG + chr2_2:36074319-36074338 None:intergenic 45.0%
TGCCAAGAAGATGGCTTGAT+TGG - chr2_2:36074322-36074341 Msa0249370:CDS 45.0%
GCCAAGAAGATGGCTTGATT+GGG - chr2_2:36074323-36074342 Msa0249370:CDS 45.0%
TCCCAATCAAGCCATCTTCT+TGG + chr2_2:36074327-36074346 None:intergenic 45.0%
TTATGCTCCGCGACAAAACT+GGG - chr2_2:36074366-36074385 Msa0249370:CDS 45.0%
!! TTTTCTGCCCAGTTTTGTCG+CGG + chr2_2:36074376-36074395 None:intergenic 45.0%
!!! CTCGTGTTTTGGCTGTAATC+CGG + chr2_2:36074403-36074422 None:intergenic 45.0%
! ACTCACAGGTTTGTTCCAGT+AGG - chr2_2:36074443-36074462 Msa0249370:intron 45.0%
! CTCACAGGTTTGTTCCAGTA+GGG - chr2_2:36074444-36074463 Msa0249370:intron 45.0%
! TTTCTCAACTTCGGGGTACT+GGG + chr2_2:36074578-36074597 None:intergenic 45.0%
ATTTCTCAACTTCGGGGTAC+TGG + chr2_2:36074579-36074598 None:intergenic 45.0%
CACGAATGATGCCTACAAGT+TGG - chr2_2:36074621-36074640 Msa0249370:intron 45.0%
CCTCATCTTCTCCAACTTGT+AGG + chr2_2:36074635-36074654 None:intergenic 45.0%
! CCTACAAGTTGGAGAAGATG+AGG - chr2_2:36074632-36074651 Msa0249370:intron 45.0%
! GTCCCAAGTTGGATATGTTG+AGG - chr2_2:36074654-36074673 Msa0249370:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr2_2:36075371-36075390 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr2_2:36075374-36075393 Msa0249370:CDS 45.0%
! GATGAGTGGTAAGACTAGCT+AGG - chr2_2:36075416-36075435 Msa0249370:intron 45.0%
! GTGGTAAGACTAGCTAGGAT+AGG - chr2_2:36075421-36075440 Msa0249370:intron 45.0%
ACACCATTAGAGAGAGAGAG+TGG - chr2_2:36075454-36075473 Msa0249370:intron 45.0%
CACCATTAGAGAGAGAGAGT+GGG - chr2_2:36075455-36075474 Msa0249370:intron 45.0%
ACCATTAGAGAGAGAGAGTG+GGG - chr2_2:36075456-36075475 Msa0249370:intron 45.0%
CTTCTTACAACGGCATCTAC+GGG + chr2_2:36075541-36075560 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr2_2:36075564-36075583 Msa0249370:CDS 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr2_2:36075574-36075593 Msa0249370:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr2_2:36075720-36075739 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr2_2:36075721-36075740 None:intergenic 45.0%
CCCTTAGAGAGAATGAACAC+AGG + chr2_2:36076672-36076691 None:intergenic 45.0%
! GTCGTTGACCGTTTTCCTGT+TGG - chr2_2:36071566-36071585 Msa0249370:CDS 50.0%
GCAAGAACACGCATACCAAC+AGG + chr2_2:36071584-36071603 None:intergenic 50.0%
TTCGATTAGGCATGTCCCAG+TGG - chr2_2:36071807-36071826 Msa0249370:intron 50.0%
TGGACACAAGTCACGAACAG+CGG - chr2_2:36071988-36072007 Msa0249370:intron 50.0%
TATCAAGCACGGACACTCCT+CGG + chr2_2:36072121-36072140 None:intergenic 50.0%
TGATGTGGCTATGCCTGACA+TGG - chr2_2:36072334-36072353 Msa0249370:intron 50.0%
CCAGATAGTCACATGCACCA+TGG + chr2_2:36072578-36072597 None:intergenic 50.0%
CCATGGTGCATGTGACTATC+TGG - chr2_2:36072575-36072594 Msa0249370:intron 50.0%
AAGGAAGGAGCAAGATGAGG+AGG - chr2_2:36072779-36072798 Msa0249370:intron 50.0%
TACTAGCATGGTTGCTGGAC+TGG - chr2_2:36073553-36073572 Msa0249370:CDS 50.0%
ACTAGCATGGTTGCTGGACT+GGG - chr2_2:36073554-36073573 Msa0249370:CDS 50.0%
TTTGGCACCTCAACCAGATC+TGG - chr2_2:36073629-36073648 Msa0249370:CDS 50.0%
GATCCTTCCAGATCTGGTTG+AGG + chr2_2:36073639-36073658 None:intergenic 50.0%
CGATGGATATGACGGCAATG+TGG + chr2_2:36073669-36073688 None:intergenic 50.0%
TTGCCGTCATATCCATCGAG+CGG - chr2_2:36073671-36073690 Msa0249370:CDS 50.0%
ACTCCGCTCGATGGATATGA+CGG + chr2_2:36073677-36073696 None:intergenic 50.0%
TGAAGCAGCTGCAAATCCAG+TGG + chr2_2:36073909-36073928 None:intergenic 50.0%
!! CACAATCACTGCTGCTTTGG+AGG - chr2_2:36074279-36074298 Msa0249370:CDS 50.0%
TTGGCATCTCGGCACATTTC+TGG + chr2_2:36074308-36074327 None:intergenic 50.0%
TGTCGCGGAGCATAACTTGA+AGG + chr2_2:36074361-36074380 None:intergenic 50.0%
GTTATGCTCCGCGACAAAAC+TGG - chr2_2:36074365-36074384 Msa0249370:CDS 50.0%
! TGAAGGGACGACTCGTGTTT+TGG + chr2_2:36074414-36074433 None:intergenic 50.0%
GAGAAGATGAGGTCCCAAGT+TGG - chr2_2:36074643-36074662 Msa0249370:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr2_2:36075382-36075401 Msa0249370:CDS 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr2_2:36075402-36075421 Msa0249370:intron 50.0%
ACCCCACTCTCTCTCTCTAA+TGG + chr2_2:36075460-36075479 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr2_2:36075716-36075735 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr2_2:36075722-36075741 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr2_2:36075719-36075738 Msa0249370:intron 50.0%
! TAGGTGTTAGTGCACTGGTG+AGG - chr2_2:36076128-36076147 Msa0249370:intron 50.0%
! AGGTGTTAGTGCACTGGTGA+GGG - chr2_2:36076129-36076148 Msa0249370:intron 50.0%
GACACGTGTCTGACACCACT+GGG + chr2_2:36071825-36071844 None:intergenic 55.0%
GTGGCTATGCCTGACATGGA+TGG - chr2_2:36072338-36072357 Msa0249370:intron 55.0%
! GAGAGTGAAGGGAGTGCAGA+TGG - chr2_2:36072828-36072847 Msa0249370:intron 55.0%
! AGGGAGTGCAGATGGAGATG+AGG - chr2_2:36072836-36072855 Msa0249370:intron 55.0%
TCAGGAGACCAAACCACACG+AGG + chr2_2:36072885-36072904 None:intergenic 55.0%
GCACCTCAACCAGATCTGGA+AGG - chr2_2:36073633-36073652 Msa0249370:CDS 55.0%
GCTTGCGATCCTTCCAGATC+TGG + chr2_2:36073645-36073664 None:intergenic 55.0%
CTACCGAAAACTCCGCTCGA+TGG + chr2_2:36073686-36073705 None:intergenic 55.0%
! CATCGAGCGGAGTTTTCGGT+AGG - chr2_2:36073684-36073703 Msa0249370:CDS 55.0%
GGTAGGCTGAATTCTCCAGC+CGG - chr2_2:36073701-36073720 Msa0249370:CDS 55.0%
! CATACCGGCAAAGCACTAGC+AGG + chr2_2:36074160-36074179 None:intergenic 55.0%
GTGCCGAGATGCCAAGAAGA+TGG - chr2_2:36074313-36074332 Msa0249370:CDS 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr2_2:36075394-36075413 Msa0249370:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr2_2:36075708-36075727 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr2_2:36075707-36075726 Msa0249370:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr2_2:36075708-36075727 Msa0249370:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr2_2:36075714-36075733 Msa0249370:intron 55.0%
CGACACGTGTCTGACACCAC+TGG + chr2_2:36071826-36071845 None:intergenic 60.0%
GGCGTGTAGGTGTCTGTGTC+TGG + chr2_2:36072015-36072034 None:intergenic 60.0%
!! GTGTCGGTGTCGGACGACAT+CGG - chr2_2:36072083-36072102 Msa0249370:intron 60.0%
!! TGTCGGTGTCGGACGACATC+GGG - chr2_2:36072084-36072103 Msa0249370:intron 60.0%
! AGCATGGTTGCTGGACTGGG+CGG - chr2_2:36073557-36073576 Msa0249370:CDS 60.0%
CCTCTCATGTTCAAGCCGGC+TGG + chr2_2:36073719-36073738 None:intergenic 60.0%
!! CCAGCCGGCTTGAACATGAG+AGG - chr2_2:36073716-36073735 Msa0249370:CDS 60.0%
! ATGGTTGCTGGACTGGGCGG+TGG - chr2_2:36073560-36073579 Msa0249370:CDS 65.0%
!! GGGGTACTGGGCAACTGACG+TGG + chr2_2:36074566-36074585 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 36071237 36076695 36071237 ID=Msa0249370;Name=Msa0249370
chr2_2 mRNA 36071237 36076695 36071237 ID=Msa0249370-mRNA-1;Parent=Msa0249370;Name=Msa0249370-mRNA-1;_AED=0.08;_eAED=0.08;_QI=209|1|1|1|0.83|0.85|7|319|689
chr2_2 exon 36071237 36071627 36071237 ID=Msa0249370-mRNA-1:exon:11578;Parent=Msa0249370-mRNA-1
chr2_2 exon 36073212 36074417 36073212 ID=Msa0249370-mRNA-1:exon:11577;Parent=Msa0249370-mRNA-1
chr2_2 exon 36074778 36074854 36074778 ID=Msa0249370-mRNA-1:exon:11576;Parent=Msa0249370-mRNA-1
chr2_2 exon 36074981 36075403 36074981 ID=Msa0249370-mRNA-1:exon:11575;Parent=Msa0249370-mRNA-1
chr2_2 exon 36075522 36075674 36075522 ID=Msa0249370-mRNA-1:exon:11574;Parent=Msa0249370-mRNA-1
chr2_2 exon 36076264 36076402 36076264 ID=Msa0249370-mRNA-1:exon:11573;Parent=Msa0249370-mRNA-1
chr2_2 exon 36076487 36076695 36076487 ID=Msa0249370-mRNA-1:exon:11572;Parent=Msa0249370-mRNA-1
chr2_2 five_prime_UTR 36076487 36076695 36076487 ID=Msa0249370-mRNA-1:five_prime_utr;Parent=Msa0249370-mRNA-1
chr2_2 CDS 36076264 36076402 36076264 ID=Msa0249370-mRNA-1:cds;Parent=Msa0249370-mRNA-1
chr2_2 CDS 36075522 36075674 36075522 ID=Msa0249370-mRNA-1:cds;Parent=Msa0249370-mRNA-1
chr2_2 CDS 36074981 36075403 36074981 ID=Msa0249370-mRNA-1:cds;Parent=Msa0249370-mRNA-1
chr2_2 CDS 36074778 36074854 36074778 ID=Msa0249370-mRNA-1:cds;Parent=Msa0249370-mRNA-1
chr2_2 CDS 36073212 36074417 36073212 ID=Msa0249370-mRNA-1:cds;Parent=Msa0249370-mRNA-1
chr2_2 CDS 36071556 36071627 36071556 ID=Msa0249370-mRNA-1:cds;Parent=Msa0249370-mRNA-1
chr2_2 three_prime_UTR 36071237 36071555 36071237 ID=Msa0249370-mRNA-1:three_prime_utr;Parent=Msa0249370-mRNA-1
Gene Sequence

>Msa0249370

ATGGGTGTGGAGAATCAAAGGAGAGATGAAGATGGGGTCGTTGACCGTTTTCCTGTTGGTATGCGTGTTCTTGCTGTTGATGACAACCCAACTTGTCTCAAAGTCTTGGCTAAACTTCTTGCTGAATGCAAATATCATGTTACTACAGCTACTAATGGATTTGATGCACTAAAAATGTTGAGGGAAAACAGAAAGAACTATGACCTGGTTATCAGTGATGTGGCTATGCCTGACATGGATGGATTTAAGTTGCTTGAGTTGGTAGGACTTGAAATGGACTTACCTGTCATCATGTTGTCGGGATACAGTGATACAAGTATGGTATTCAAGGGTGTTACCCATGGTGCATGTGACTATCTGGTGAAACCTGTTCGACTTGAAGAGCTTAGAAACATATGGCAACATGTAATCCGAAAGAAAAAAACTAATTCCAAGGATGATAACAAGGCTTCCAATGAGGATAAGGTCCCTAATATTTCTGGTGGAAGCAATCAGAACATATTGGAGAACAGTGCTGATCGGAATAAAAGGCTCGGTAAAAGAAGGAAGGAGCAAGATGAGGAGGAGAAAGAAGAAGAAGAAGATGATGAAGAGAGTGAAGGGAGTGCAGATGGAGATGAGGATGACCCGTCATCACAGAAGAAACCTCGTGTGGTTTGGTCTCCTGATTTGCATAAGAAATTTGTTTGTGCTGTTAATCAACTTGGTGCAGACAGGGCTGTTCCGAAGAAAATACTTGAGCTGATGAATATTGAAGGGATTACCAGAGAAAATGTAGCAAGCCATTTGCAGAAATATAGACTCTATCTGAAAAAGGCAACTCCCCATCATACTAGCATGGTTGCTGGACTGGGCGGTGGTAATGATTCTTACCTTCGGATGAGTGGAATAGATGGATATGCAGACTTTGGCACCTCAACCAGATCTGGAAGGATCGCAAGCACCACATTGCCGTCATATCCATCGAGCGGAGTTTTCGGTAGGCTGAATTCTCCAGCCGGCTTGAACATGAGAGGAATTAATTCTTCAACACTGATTCAGCCTGTTCAGTCTCAAAACATCAACAACTCCTGGATTTCTGCAAATCAAAGCTCAAGCTTATTACATGGTGTTCCAACTGAGCTTAACCAATCTAAGCTAAACAATAGTGCAACTGGTATATCGCAGTTAAATCAAATTGATTCCACTGGATTTGCAGCTGCTTCAGACTTTCACGATAGGGCTATTAACAGTTCTAATCAAGTCTCAAACCATCATCTGTTGTTGCAAGGAAATTCACAACAGACACACAATGCAGGGTCAGTCAGAAATCAGTCTTCTGTTGGATCTGCTTCCTTGGGAAACAGAAACATTACTATTGGCGGTTCTTCTAATTTTTTGGATTATAATCGGTGTAGTGAAAACTGGCAAAGTCAAGCTCAGTTACCTGAATTTCCTGCTAGTGCTTTGCCGGTATGCAAGTCTTTCAATAACGACCAACTGCCTCTCAATAACATTACTGCTTTTAACCAAAGCCCTCTTATCGCTAACAGTCCAGTTGACTTTTCGTCTGGAAACACAATCACTGCTGCTTTGGAGGAAGCCAGAAATGTGCCGAGATGCCAAGAAGATGGCTTGATTGGGAATTTTATACAGCCTTCAAGTTATGCTCCGCGACAAAACTGGGCAGAAAATAAACCGGATTACAGCCAAAACACGAGTCGTCCCTTCAATCCTTTGAACTCACAGGTTTGTTCCAGTAGGGCATTGACAAATTCTGCGTCTCACAATATCAACCAAAGTAAAACAGTCTGCAGCAATAGAGTTGATGCATCTTTTGTTGATCATGTATATGGCGCTTCCACGTCAGTTGCCCAGTACCCCGAAGTTGAGAAATTCTCGTCAGACGTACAAGTCAACACGAATGATGCCTACAAGTTGGAGAAGATGAGGTCCCAAGTTGGATATGTTGAGGGTTTTGGAACCTTAGAAGACATAATGGGTGCAATAGTCAAAAGGGAGCAAATTGAGATGACATTGATGGATGGAGAAATGTGTTATGATGCATACCCTGTTGGATCATGCATTTGA
Protein sequence

>Msa0249370

MGVENQRRDEDGVVDRFPVGMRVLAVDDNPTCLKVLAKLLAECKYHVTTATNGFDALKMLRENRKNYDLVISDVAMPDMDGFKLLELVGLEMDLPVIMLSGYSDTSMVFKGVTHGACDYLVKPVRLEELRNIWQHVIRKKKTNSKDDNKASNEDKVPNISGGSNQNILENSADRNKRLGKRRKEQDEEEKEEEEDDEESEGSADGDEDDPSSQKKPRVVWSPDLHKKFVCAVNQLGADRAVPKKILELMNIEGITRENVASHLQKYRLYLKKATPHHTSMVAGLGGGNDSYLRMSGIDGYADFGTSTRSGRIASTTLPSYPSSGVFGRLNSPAGLNMRGINSSTLIQPVQSQNINNSWISANQSSSLLHGVPTELNQSKLNNSATGISQLNQIDSTGFAAASDFHDRAINSSNQVSNHHLLLQGNSQQTHNAGSVRNQSSVGSASLGNRNITIGGSSNFLDYNRCSENWQSQAQLPEFPASALPVCKSFNNDQLPLNNITAFNQSPLIANSPVDFSSGNTITAALEEARNVPRCQEDGLIGNFIQPSSYAPRQNWAENKPDYSQNTSRPFNPLNSQVCSSRALTNSASHNINQSKTVCSNRVDASFVDHVYGASTSVAQYPEVEKFSSDVQVNTNDAYKLEKMRSQVGYVEGFGTLEDIMGAIVKREQIEMTLMDGEMCYDAYPVGSCI*