AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0345050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0345050 MtrunA17_Chr3g0093041 95.238 609 27 1 350 956 1 609 0.0 1211
Msa0345050 MtrunA17_Chr3g0132711 81.669 611 100 4 349 951 14 620 0.0 1036
Msa0345050 MtrunA17_Chr3g0093051 91.977 349 28 0 1 349 1 349 0.0 624
Msa0345050 MtrunA17_Chr3g0132721 76.791 349 81 0 1 349 1 349 1.76e-177 518
Msa0345050 MtrunA17_Chr3g0093091 32.186 668 401 19 194 852 309 933 1.01e-86 298
Msa0345050 MtrunA17_Chr4g0060401 32.698 682 379 20 194 852 302 926 6.95e-86 296
Msa0345050 MtrunA17_Chr4g0060501 31.811 657 392 17 207 852 317 928 3.37e-84 291
Msa0345050 MtrunA17_Chr4g0060431 32.209 652 386 14 207 847 302 908 3.97e-84 291
Msa0345050 MtrunA17_Chr7g0257341 28.526 936 511 31 9 848 5 878 3.45e-78 280
Msa0345050 MtrunA17_Chr7g0257341 27.401 781 468 25 10 751 968 1688 7.03e-57 214
Msa0345050 MtrunA17_Chr4g0060421 35.113 487 271 13 370 852 3 448 1.24e-72 247
Msa0345050 MtrunA17_Chr4g0060471 41.892 296 154 6 558 851 1 280 1.37e-64 219
Msa0345050 MtrunA17_Chr3g0130331 30.857 175 106 5 554 717 70 240 1.67e-18 90.9
Msa0345050 MtrunA17_Chr1g0202431 28.507 221 149 5 533 748 41 257 7.42e-18 88.6
Msa0345050 MtrunA17_Chr8g0384391 30.270 185 117 4 541 717 55 235 2.36e-16 84.0
Msa0345050 MtrunA17_Chr1g0198931 26.296 270 178 8 527 780 92 356 9.46e-16 82.0
Msa0345050 MtrunA17_Chr4g0041871 31.016 187 117 7 558 737 376 557 6.00e-15 79.7
Msa0345050 MtrunA17_Chr1g0200651 26.437 261 163 8 554 793 102 354 1.67e-14 77.8
Msa0345050 MtrunA17_Chr4g0039261 26.432 227 148 6 553 766 62 282 1.73e-14 77.8
Msa0345050 MtrunA17_Chr8g0393191 28.400 250 158 8 527 764 58 298 3.59e-14 77.0
Msa0345050 MtrunA17_Chr2g0318061 25.697 323 172 14 505 798 18 301 6.64e-14 74.7
Msa0345050 MtrunA17_Chr4g0050221 27.826 230 144 6 553 766 42 265 6.90e-14 75.9
Msa0345050 MtrunA17_Chr4g0065231 25.155 322 211 11 520 829 57 360 9.99e-14 75.5
Msa0345050 MtrunA17_Chr4g0050261 30.000 190 112 5 543 717 74 257 2.02e-13 74.7
Msa0345050 MtrunA17_Chr1g0178481 25.000 204 143 5 541 737 395 595 2.33e-13 74.3
Msa0345050 MtrunA17_Chr5g0411621 29.208 202 128 6 552 742 61 258 2.39e-13 74.3
Msa0345050 MtrunA17_Chr4g0050291 25.468 267 177 6 516 766 24 284 3.26e-13 73.9
Msa0345050 MtrunA17_Chr1g0199471 27.586 232 148 7 541 758 516 741 3.57e-13 73.9
Msa0345050 MtrunA17_Chr7g0264441 29.630 162 100 4 541 692 278 435 5.26e-13 73.2
Msa0345050 MtrunA17_Chr3g0102731 29.730 185 115 6 543 717 99 278 7.90e-13 72.4
Msa0345050 MtrunA17_Chr5g0408061 27.731 238 154 8 554 778 77 309 1.08e-12 72.0
Msa0345050 MtrunA17_Chr1g0180971 31.056 161 99 4 541 692 412 569 1.67e-12 71.6
Msa0345050 MtrunA17_Chr8g0359931 29.143 175 107 5 554 717 78 246 1.69e-12 71.2
Msa0345050 MtrunA17_Chr6g0477811 24.908 273 182 7 557 812 81 347 2.72e-12 70.9
Msa0345050 MtrunA17_Chr4g0050251 30.000 190 112 6 543 717 74 257 4.03e-12 70.5
Msa0345050 MtrunA17_Chr2g0316301 26.941 219 139 8 560 761 91 305 4.28e-12 70.1
Msa0345050 MtrunA17_Chr4g0039251 25.510 196 127 6 554 736 105 294 4.35e-12 70.1
Msa0345050 MtrunA17_Chr5g0446901 29.032 186 119 5 543 717 110 293 5.10e-12 69.7
Msa0345050 MtrunA17_Chr4g0028621 32.298 161 89 5 541 688 506 659 8.04e-12 69.7
Msa0345050 MtrunA17_Chr1g0213091 27.619 210 136 6 554 751 134 339 1.85e-11 68.2
Msa0345050 MtrunA17_Chr1g0176451 23.913 276 174 9 554 797 35 306 2.77e-11 67.4
Msa0345050 MtrunA17_Chr1g0176441 25.359 209 141 6 553 750 182 386 3.57e-11 67.4
Msa0345050 MtrunA17_Chr1g0156821 24.434 221 157 5 556 770 1025 1241 3.59e-11 67.4
Msa0345050 MtrunA17_Chr4g0060411 32.484 157 102 4 194 347 293 448 3.70e-11 66.6
Msa0345050 MtrunA17_Chr7g0263351 27.143 210 135 7 554 750 139 343 7.49e-11 66.2
Msa0345050 MtrunA17_Chr7g0262221 30.481 187 113 6 543 717 855 1036 8.08e-11 66.6
Msa0345050 MtrunA17_Chr7g0267971 24.354 271 182 10 485 743 109 368 9.55e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0345050 AT3G47730.1 66.077 961 305 7 1 947 3 956 0.0 1327
Msa0345050 AT5G61690.2 62.917 960 332 9 1 946 3 952 0.0 1216
Msa0345050 AT5G61690.1 62.396 960 336 10 1 946 3 951 0.0 1201
Msa0345050 AT5G61730.2 62.565 959 330 8 1 946 3 945 0.0 1196
Msa0345050 AT5G61730.1 61.731 959 328 9 1 946 3 935 0.0 1171
Msa0345050 AT5G61700.1 30.804 659 388 17 207 852 308 911 4.83e-88 302
Msa0345050 AT3G47790.1 30.075 798 474 23 79 851 163 901 4.76e-83 288
Msa0345050 AT3G47780.1 30.606 660 391 15 207 852 323 929 1.67e-82 287
Msa0345050 AT5G61740.3 30.534 655 390 14 207 852 166 764 6.96e-82 281
Msa0345050 AT5G61740.2 30.534 655 390 14 207 852 271 869 3.06e-81 282
Msa0345050 AT5G61740.1 30.534 655 390 14 207 852 305 903 6.62e-81 282
Msa0345050 AT3G47750.1 30.712 674 398 16 194 852 312 931 1.50e-79 278
Msa0345050 AT3G47740.1 30.090 668 381 17 207 852 323 926 2.08e-77 272
Msa0345050 AT2G41700.1 34.019 632 339 18 242 848 295 873 4.91e-77 276
Msa0345050 AT2G41700.1 33.207 527 292 16 245 751 1197 1683 2.57e-63 235
Msa0345050 AT3G47760.3 30.480 666 384 19 207 852 324 930 1.18e-76 270
Msa0345050 AT3G47770.1 30.075 665 382 16 207 849 294 897 4.87e-76 268
Msa0345050 AT3G47770.2 30.075 665 382 16 207 849 320 923 7.22e-76 268
Msa0345050 AT3G47760.1 30.045 669 377 20 207 852 290 890 2.38e-75 266
Msa0345050 AT2G41700.2 34.159 565 311 15 297 848 277 793 6.36e-70 255
Msa0345050 AT2G41700.2 31.028 564 313 16 245 762 1119 1652 2.71e-59 222
Msa0345050 AT3G47760.2 30.135 667 355 23 207 852 324 900 1.02e-68 247
Msa0345050 AT5G61700.2 30.443 519 315 13 207 716 308 789 1.74e-65 236
Msa0345050 AT5G61700.4 30.443 519 315 13 207 716 308 789 1.74e-65 236
Msa0345050 AT3G47790.2 29.412 663 400 20 79 717 44 662 4.04e-62 224
Msa0345050 AT3G47790.3 29.412 663 400 20 79 717 163 781 1.28e-61 224
Msa0345050 AT5G61700.3 25.624 441 284 12 207 640 308 711 3.62e-36 147
Msa0345050 AT3G47770.3 23.585 424 259 11 207 611 320 697 2.69e-20 97.1
Msa0345050 AT4G25750.1 33.679 193 113 8 553 737 41 226 1.13e-18 91.3
Msa0345050 AT2G13610.1 33.511 188 107 8 541 717 61 241 1.64e-18 91.3
Msa0345050 AT5G52860.1 29.703 202 132 6 539 735 41 237 8.57e-17 85.5
Msa0345050 AT3G13220.1 24.828 290 184 8 541 800 105 390 3.81e-15 80.5
Msa0345050 AT4G27420.1 26.433 314 205 13 529 820 53 362 1.34e-14 78.6
Msa0345050 AT1G65410.1 28.182 220 132 7 541 737 98 314 1.65e-14 76.6
Msa0345050 AT1G53270.1 29.293 198 115 8 554 735 62 250 1.97e-14 77.8
Msa0345050 AT2G37010.2 28.452 239 154 7 541 766 499 733 3.44e-14 77.8
Msa0345050 AT2G37010.1 28.452 239 154 7 541 766 499 733 3.44e-14 77.8
Msa0345050 AT1G51500.1 25.957 235 143 8 553 770 55 275 4.10e-14 77.0
Msa0345050 AT1G51460.1 29.444 180 103 6 553 717 41 211 1.43e-13 75.5
Msa0345050 AT3G21090.1 25.888 197 127 6 553 736 56 246 1.93e-13 75.1
Msa0345050 AT1G67940.1 24.121 199 142 6 543 737 45 238 3.94e-13 71.2
Msa0345050 AT3G25620.2 26.277 274 179 10 554 813 111 375 3.95e-13 73.9
Msa0345050 AT5G06530.3 27.830 212 138 6 543 743 180 387 8.31e-13 72.8
Msa0345050 AT5G06530.2 27.830 212 138 6 543 743 180 387 8.82e-13 72.8
Msa0345050 AT5G06530.1 27.830 212 138 6 543 743 180 387 8.82e-13 72.8
Msa0345050 AT1G17840.1 26.141 241 155 7 541 766 68 300 8.94e-13 72.8
Msa0345050 AT3G25620.1 26.277 274 179 10 554 813 111 375 1.03e-12 72.0
Msa0345050 AT3G55110.1 31.280 211 130 7 554 752 103 310 1.91e-12 71.6
Msa0345050 AT5G06530.4 29.082 196 124 6 559 743 1 192 3.85e-12 70.5
Msa0345050 AT4G15236.1 28.652 178 114 5 550 717 825 999 5.54e-12 70.9
Msa0345050 AT1G31770.1 29.310 174 110 4 553 717 92 261 7.69e-12 69.7
Msa0345050 AT5G60740.1 30.128 156 99 3 541 688 514 667 7.97e-12 70.1
Msa0345050 AT1G27940.2 24.074 216 144 6 544 748 809 1015 9.28e-12 69.7
Msa0345050 AT1G27940.2 23.485 264 169 7 500 751 143 385 1.38e-11 69.3
Msa0345050 AT4G15233.2 28.652 178 114 5 550 717 827 1001 1.28e-11 69.7
Msa0345050 AT1G27940.1 24.074 216 144 6 544 748 1023 1229 1.29e-11 69.3
Msa0345050 AT1G27940.1 23.485 264 169 7 500 751 357 599 1.61e-11 69.3
Msa0345050 AT4G15233.7 28.652 178 114 5 550 717 809 983 1.42e-11 69.3
Msa0345050 AT4G15233.5 28.652 178 114 5 550 717 684 858 1.43e-11 69.3
Msa0345050 AT4G15233.4 28.652 178 114 5 550 717 684 858 1.43e-11 69.3
Msa0345050 AT4G15233.8 28.652 178 114 5 550 717 818 992 1.44e-11 69.3
Msa0345050 AT4G15233.3 28.652 178 114 5 550 717 765 939 1.46e-11 69.3
Msa0345050 AT4G15233.6 28.652 178 114 5 550 717 765 939 1.46e-11 69.3
Msa0345050 AT5G19410.1 24.757 206 136 7 553 742 77 279 1.52e-11 68.9
Msa0345050 AT4G15233.1 28.652 178 114 5 550 717 827 1001 1.57e-11 69.3
Msa0345050 AT5G19410.2 24.757 206 136 7 553 742 86 288 1.58e-11 68.6
Msa0345050 AT1G53390.1 28.824 170 108 4 558 717 539 705 1.64e-11 68.9
Msa0345050 AT3G55130.1 29.412 204 117 8 551 736 108 302 2.17e-11 68.6
Msa0345050 AT3G55100.1 27.136 199 127 7 552 737 61 254 2.51e-11 68.2
Msa0345050 AT3G55100.2 27.136 199 127 7 552 737 61 254 2.51e-11 68.2
Msa0345050 AT1G28010.1 24.215 223 151 5 539 751 386 600 3.19e-11 68.2
Msa0345050 AT2G37360.1 25.911 247 151 8 527 750 112 349 5.37e-11 67.0
Msa0345050 AT2G26910.1 31.863 204 111 10 550 735 853 1046 7.79e-11 67.0
Msa0345050 AT2G37280.4 29.444 180 110 6 550 717 690 864 8.35e-11 67.0
Msa0345050 AT2G37280.3 29.444 180 110 6 550 717 877 1051 9.58e-11 66.6

Find 226 sgRNAs with CRISPR-Local

Find 487 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTTACAGCATTGATTTA+TGG 0.123489 3_1:+4062234 Msa0345050:intron
TTCATCCAAAATGACTAATT+TGG 0.137012 3_1:-4062903 None:intergenic
ACTTTCTAAATCCTCGTTAT+TGG 0.150098 3_1:+4061114 Msa0345050:CDS
TTTGAGGAATATGAGCTTTC+TGG 0.153807 3_1:-4064764 None:intergenic
TGACCCCAAATTAGTCATTT+TGG 0.172803 3_1:+4062898 Msa0345050:CDS
TGATTCATGCTCAGTGATTT+TGG 0.177760 3_1:+4064885 Msa0345050:exon
TACCCCGGTATATTTAAATT+TGG 0.202872 3_1:+4061424 Msa0345050:CDS
TCAAACATTCGAAAGATTAT+TGG 0.207745 3_1:+4062285 Msa0345050:CDS
TATTCTCACAACACATTCTA+TGG 0.213101 3_1:+4063093 Msa0345050:CDS
CACACATGCCTCCTTGTTAT+TGG 0.221179 3_1:-4063034 None:intergenic
GAACTCTTCTCTAGAATTAA+AGG 0.224002 3_1:+4062651 Msa0345050:CDS
CCTTTACAGCATTGATTTAT+GGG 0.249063 3_1:+4062235 Msa0345050:intron
GAAATCGCTAGGTTTCTTAT+TGG 0.252209 3_1:+4057956 Msa0345050:CDS
AAGTTATTGTTCTCCTCTTT+TGG 0.268745 3_1:-4063415 None:intergenic
TCATCCAAAATGACTAATTT+GGG 0.271209 3_1:-4062902 None:intergenic
CTGGTCATTACCGAGATTTA+TGG 0.288621 3_1:+4060641 Msa0345050:CDS
CAAGATAGAAAAGAAGAATT+TGG 0.305480 3_1:+4063982 Msa0345050:CDS
TCCTCACAAGGTTTGATTGA+TGG 0.314934 3_1:-4057602 None:intergenic
TTCCTCACACCCATTTCATT+TGG 0.315266 3_1:-4061080 None:intergenic
TGATATTTATATACGGCTTC+TGG 0.316760 3_1:+4061007 Msa0345050:CDS
TGCCGTGTTATGATTTCATT+TGG 0.319017 3_1:+4057642 Msa0345050:CDS
GACAGAATGATATTTATATA+CGG 0.323292 3_1:+4061000 Msa0345050:intron
ACGTCTGAACTAACTTGATT+TGG 0.327114 3_1:-4064855 None:intergenic
ATGGAAGTATTATTAGTTAT+GGG 0.329578 3_1:+4057840 Msa0345050:CDS
CAATATAATCCCAAATGAAA+TGG 0.332938 3_1:+4061070 Msa0345050:CDS
GATGCTGTGTCACCATTTGC+AGG 0.333293 3_1:-4063259 None:intergenic
ACCGGTACCCTTTGTATTGC+CGG 0.337280 3_1:+4064735 Msa0345050:CDS
TTCTCTACAGTTGGATCAAT+GGG 0.340505 3_1:+4059536 Msa0345050:CDS
AACACATTCCACTTGAAGTC+TGG 0.343527 3_1:-4059479 None:intergenic
AATGGAAGTATTATTAGTTA+TGG 0.344238 3_1:+4057839 Msa0345050:CDS
TGACGCAAATGTTGCTGTTC+AGG 0.344942 3_1:+4061381 Msa0345050:CDS
TCACCATGTTGAGTTCAAAT+AGG 0.347909 3_1:-4060273 None:intergenic
CATGAGGAATCACATAAGTT+AGG 0.353265 3_1:-4063438 None:intergenic
TCCTCACACCCATTTCATTT+GGG 0.358716 3_1:-4061079 None:intergenic
AGCATTGATTTATGGGAATT+CGG 0.359317 3_1:+4062242 Msa0345050:intron
TTGAGGAATATGAGCTTTCT+GGG 0.364777 3_1:-4064763 None:intergenic
AGTGTTGCAATTGCACTTAT+CGG 0.365108 3_1:+4062875 Msa0345050:CDS
GCTATGTATGTGGGATTTCC+AGG 0.365207 3_1:+4064651 Msa0345050:CDS
ATCAGATTGAAGTCACGTTT+TGG 0.380754 3_1:+4063187 Msa0345050:CDS
CAGCTAACCCCGTTATCTTC+AGG 0.381965 3_1:-4060727 None:intergenic
CTTTGTCTATGGCGAAGATT+AGG 0.382631 3_1:-4057511 None:intergenic
CGTTCTTCAGATAAGTTCAT+TGG 0.383758 3_1:+4059595 Msa0345050:CDS
CGCCGGTCAGGGTCAGTTCA+TGG 0.391054 3_1:+4064819 Msa0345050:CDS
AAATTACTTTCAGGGCTTGT+GGG 0.395875 3_1:+4061972 Msa0345050:intron
TCAAGGACGTCTTCATCATC+TGG 0.400264 3_1:-4061316 None:intergenic
TCACCATCTCCATCAGTTAC+TGG 0.400609 3_1:-4062084 None:intergenic
TATGTCGAGATGGAAGAATT+TGG 0.401224 3_1:+4065024 Msa0345050:three_prime_UTR
TTTCAACTCCTGAAGATAAC+GGG 0.402720 3_1:+4060719 Msa0345050:CDS
GTAACTTCCAGCTCTTACTT+TGG 0.403285 3_1:-4062828 None:intergenic
GTAGAGAAAGGAGCCATTCC+TGG 0.403530 3_1:-4059521 None:intergenic
CAAATTACTTTCAGGGCTTG+TGG 0.404244 3_1:+4061971 Msa0345050:intron
ATCTACAGTTTGATATCCTA+TGG 0.404903 3_1:+4062601 Msa0345050:intron
TTTCTCTACAGTTGGATCAA+TGG 0.405765 3_1:+4059535 Msa0345050:CDS
CACACAGTCATCGTCGTTAA+CGG 0.408573 3_1:-4060770 None:intergenic
ACTGCAAGACAACGCCGGTC+AGG 0.409291 3_1:+4064807 Msa0345050:CDS
GATTATATTGTCAAAGTAGA+TGG 0.409408 3_1:-4061057 None:intergenic
ATCCTATGGGAGGCTTTGTC+TGG 0.412790 3_1:+4062615 Msa0345050:CDS
TTTCTTGAATATTGCAAAGC+AGG 0.416432 3_1:+4064047 Msa0345050:CDS
ATTCTTATTTCTTAGACTAC+TGG 0.420871 3_1:+4063004 Msa0345050:intron
CTAAATCCTCGTTATTGGAC+AGG 0.423781 3_1:+4061119 Msa0345050:CDS
GGCTTCTCCGTATTTATTGT+CGG 0.424578 3_1:+4060467 Msa0345050:CDS
ATTGATGGAGATGGAATCAT+TGG 0.429463 3_1:-4057587 None:intergenic
TGCTCCTTACCACGCTGTTA+AGG 0.432338 3_1:+4061471 Msa0345050:CDS
CCTTTGCCATGATTCCTATA+CGG 0.433267 3_1:-4063138 None:intergenic
ATGGAAGAATTTGGAGGGGA+AGG 0.434696 3_1:+4065033 Msa0345050:three_prime_UTR
GCAACCAAATTTAAATATAC+CGG 0.438025 3_1:-4061428 None:intergenic
AACTCTTCTCTAGAATTAAA+GGG 0.440828 3_1:+4062652 Msa0345050:CDS
TTTCATTCGTAAATCATCTT+CGG 0.441394 3_1:+4060433 Msa0345050:CDS
ACACTCAGGCCTTGAGCAAA+AGG 0.441420 3_1:-4060682 None:intergenic
CTGAAGATAACGGGGTTAGC+TGG 0.442106 3_1:+4060728 Msa0345050:CDS
AGAGAGAGAAGAGGTGAGGA+AGG 0.446399 3_1:-4057314 None:intergenic
ATTAGGAAAATGAAGAAGAT+TGG 0.447583 3_1:-4057494 None:intergenic
GGCTTTACGACTCTGCATAC+TGG 0.448998 3_1:+4060122 Msa0345050:CDS
GTGACTTTGACCTTGACATC+TGG 0.451578 3_1:+4064105 Msa0345050:CDS
AGGCCTTGAGCAAAAGGATT+AGG 0.453113 3_1:-4060676 None:intergenic
TGGAAGAATTTGGAGGGGAA+GGG 0.453395 3_1:+4065034 Msa0345050:three_prime_UTR
ACTGGTTATCATGGCTAACC+TGG 0.456830 3_1:+4060140 Msa0345050:CDS
CGCTCCGCAGCAAGCTGAAG+AGG 0.457165 3_1:-4057932 None:intergenic
ATCGCTAGGTTTCTTATTGG+AGG 0.460474 3_1:+4057959 Msa0345050:CDS
TAGAGAAATACCTGTTGAAA+AGG 0.463474 3_1:+4057727 Msa0345050:CDS
AATATAATCCCAAATGAAAT+GGG 0.463808 3_1:+4061071 Msa0345050:CDS
AAGGGAAAGCTGCGCTGCAT+TGG 0.464105 3_1:+4063157 Msa0345050:CDS
CTTTCGAATGTTTGACATGC+CGG 0.464463 3_1:-4062277 None:intergenic
TATTTCTTAGACTACTGGTA+TGG 0.468191 3_1:+4063009 Msa0345050:intron
TTTAGATGTAGTACCAAAAG+AGG 0.471690 3_1:+4063402 Msa0345050:CDS
TTGACATGCCGGTAGAGCTT+CGG 0.474734 3_1:-4062266 None:intergenic
ACAGCTATTAGTTGTTTGAC+AGG 0.479657 3_1:+4062054 Msa0345050:CDS
CTAGAAAGTGCTGCAGCTGA+AGG 0.480749 3_1:+4064075 Msa0345050:CDS
TCTCTTCTCTTAGTTCTCAC+TGG 0.490049 3_1:+4060187 Msa0345050:CDS
TATTCAGTAGACTCTGATCC+TGG 0.491964 3_1:-4064669 None:intergenic
GGATAGGCAATGACCGTGAT+GGG 0.492293 3_1:+4060100 Msa0345050:intron
CAAGGTTTGATTGATGGAGA+TGG 0.493575 3_1:-4057596 None:intergenic
AAGAATTTGGAGGGGAAGGG+AGG 0.496014 3_1:+4065037 Msa0345050:three_prime_UTR
TTGCAGTAGCAGATGGTAGT+TGG 0.501869 3_1:-4064791 None:intergenic
AATTCGGTCCGAAGCTCTAC+CGG 0.502704 3_1:+4062258 Msa0345050:CDS
ATGAGCTTTCTGGGAGTGGC+CGG 0.502830 3_1:-4064754 None:intergenic
AAGTGACCGTATAGGAATCA+TGG 0.504779 3_1:+4063132 Msa0345050:CDS
ACACATTCCACTTGAAGTCT+GGG 0.505693 3_1:-4059478 None:intergenic
CATAAATCTCGGTAATGACC+AGG 0.507288 3_1:-4060640 None:intergenic
AAATGAAAGGAAATAGAGAA+TGG 0.507748 3_1:+4064926 Msa0345050:three_prime_UTR
TAATTCTAGAGAAGAGTTCG+AGG 0.508271 3_1:-4062647 None:intergenic
CTGCGGAGCGTGAAATCGCT+AGG 0.509620 3_1:+4057945 Msa0345050:CDS
AATGTTGCTGTTCAGGTACA+AGG 0.509773 3_1:+4061388 Msa0345050:CDS
ATGGCTCCTTTCTCTACAGT+TGG 0.510714 3_1:+4059527 Msa0345050:CDS
TTCTGGCCACATTCTTTCTG+TGG 0.512555 3_1:+4061024 Msa0345050:CDS
AGGATAATTAAGAATAATCC+TGG 0.512597 3_1:+4057704 Msa0345050:CDS
TCGAGATGGAAGAATTTGGA+GGG 0.518629 3_1:+4065028 Msa0345050:three_prime_UTR
CAACCAAATTTAAATATACC+GGG 0.518875 3_1:-4061427 None:intergenic
GTAGATTACAGAAACATCAT+TGG 0.519025 3_1:+4062781 Msa0345050:intron
TATTGTCGGCTTCATGACTC+AGG 0.521620 3_1:+4060481 Msa0345050:CDS
CTCCATGAACTGACCCTGAC+CGG 0.524172 3_1:-4064821 None:intergenic
GAGTGTAACAACTGTTTCCC+AGG 0.524237 3_1:-4060158 None:intergenic
ATAAGAATGAAGTTGATGAT+TGG 0.525841 3_1:+4057765 Msa0345050:CDS
GGCATATCTGACATCCAGCT+TGG 0.526758 3_1:+4064003 Msa0345050:CDS
CTATTAGGACCCAATGGAGC+GGG 0.528099 3_1:+4062024 Msa0345050:CDS
GTTTCAACTCCTGAAGATAA+CGG 0.529040 3_1:+4060718 Msa0345050:CDS
CTTCCTATTTGAACTCAACA+TGG 0.529346 3_1:+4060270 Msa0345050:CDS
GAAAGAGCTTAAACTTCGCC+AGG 0.529573 3_1:+4059625 Msa0345050:CDS
GAATATGAGCTTTCTGGGAG+TGG 0.529777 3_1:-4064758 None:intergenic
ACTCTGCATACTGGTTATCA+TGG 0.530073 3_1:+4060131 Msa0345050:CDS
AAGGAGCCATTCCTGGGTGC+GGG 0.532692 3_1:-4059514 None:intergenic
CGTATAGGAATCATGGCAAA+GGG 0.534824 3_1:+4063139 Msa0345050:CDS
AATGATCACAGTCCTGCAAA+TGG 0.535003 3_1:+4063247 Msa0345050:CDS
GTGGACTAAACTCTTCATGC+CGG 0.539359 3_1:-4061294 None:intergenic
CAAGAGTTGTTAGACCAAGC+TGG 0.541847 3_1:-4064017 None:intergenic
CATGAAGCCGACAATAAATA+CGG 0.542083 3_1:-4060474 None:intergenic
ATGTCAAGGTCAAAGTCACT+AGG 0.542916 3_1:-4064101 None:intergenic
CGTTGTCTTGCAGTAGCAGA+TGG 0.546260 3_1:-4064798 None:intergenic
GACATTCTAAGTGACCGTAT+AGG 0.546313 3_1:+4063124 Msa0345050:CDS
CCCACATACATAGCTCCTAC+AGG 0.547082 3_1:-4064642 None:intergenic
TCAACAATTGTACGAAACTT+CGG 0.547224 3_1:-4057680 None:intergenic
AAAGGAGCCATTCCTGGGTG+CGG 0.547300 3_1:-4059515 None:intergenic
CAATAACAAGGAGGCATGTG+TGG 0.547456 3_1:+4063035 Msa0345050:CDS
GGCAACTGAAAATCAAAAGT+AGG 0.551167 3_1:-4057911 None:intergenic
CCTCGTTATTGGACAGGAGA+CGG 0.551929 3_1:+4061125 Msa0345050:CDS
GCATTTCTTTCATAGAGGGT+GGG 0.552589 3_1:+4061248 Msa0345050:intron
AAGAATCCTATGCAATGTCC+TGG 0.553087 3_1:+4057794 Msa0345050:CDS
AGAATGTGTTGTGAGAATAA+TGG 0.556766 3_1:-4063089 None:intergenic
CTGCAAGACAACGCCGGTCA+GGG 0.558498 3_1:+4064808 Msa0345050:CDS
GGAATTCCCGCACCCAGGAA+TGG 0.559180 3_1:+4059508 Msa0345050:CDS
AGGGAGAGAGAGAAGAGGTG+AGG 0.559725 3_1:-4057318 None:intergenic
GGGAGTGGCCGGCAATACAA+AGG 0.562004 3_1:-4064743 None:intergenic
ATTGATCCAACTGTAGAGAA+AGG 0.562560 3_1:-4059533 None:intergenic
TTTACCTTAACAGCGTGGTA+AGG 0.562656 3_1:-4061475 None:intergenic
GGGATAGGCAATGACCGTGA+TGG 0.562743 3_1:+4060099 Msa0345050:intron
GACATCTGGAGAGTCTGTCC+AGG 0.563696 3_1:+4064119 Msa0345050:CDS
GATGCAGCCAAAGTAAGAGC+TGG 0.564253 3_1:+4062821 Msa0345050:CDS
TCCTGTAGGAGCTATGTATG+TGG 0.564459 3_1:+4064641 Msa0345050:CDS
GCCGGCAATACAAAGGGTAC+CGG 0.564920 3_1:-4064736 None:intergenic
CAGAGAGGGAGAGAGAGAAG+AGG 0.565225 3_1:-4057323 None:intergenic
TGGACTAAACTCTTCATGCC+GGG 0.567053 3_1:-4061293 None:intergenic
GACAGACTCTCCAGATGTCA+AGG 0.568009 3_1:-4064115 None:intergenic
TTGCAGATGGTGTCAACAGT+AGG 0.570022 3_1:+4060601 Msa0345050:intron
CCTGTAGGAGCTATGTATGT+GGG 0.570418 3_1:+4064642 Msa0345050:CDS
GTCGAGATGGAAGAATTTGG+AGG 0.570535 3_1:+4065027 Msa0345050:three_prime_UTR
TCAACAGGTATTTCTCTACC+AGG 0.570994 3_1:-4057722 None:intergenic
ATGAAGAATTTCTCCTCACA+AGG 0.572331 3_1:-4057614 None:intergenic
GAAACAATAACCATAAATCT+CGG 0.572683 3_1:-4060651 None:intergenic
ACTTCTACCATAAAACCTGT+GGG 0.576329 3_1:-4064693 None:intergenic
AAATGAAGAAGATTGGTGAG+AGG 0.576882 3_1:-4057487 None:intergenic
GATTATTGGAGTGTGTCCCC+AGG 0.579294 3_1:+4062299 Msa0345050:CDS
TACAGAAACATCATTGGCAG+AGG 0.580624 3_1:+4062787 Msa0345050:CDS
CAGCTATTAGTTGTTTGACA+GGG 0.580828 3_1:+4062055 Msa0345050:CDS
TAGAGAAAGGAGCCATTCCT+GGG 0.582798 3_1:-4059520 None:intergenic
AATGAAAGCTGATAACAAGA+AGG 0.585623 3_1:-4060417 None:intergenic
TTCAAGGAATTCCCGCACCC+AGG 0.586408 3_1:+4059503 Msa0345050:CDS
GGAGTGGCCGGCAATACAAA+GGG 0.587849 3_1:-4064742 None:intergenic
CCGTATAGGAATCATGGCAA+AGG 0.588577 3_1:+4063138 Msa0345050:CDS
CGAGATGGAAGAATTTGGAG+GGG 0.588801 3_1:+4065029 Msa0345050:three_prime_UTR
ATGGAGATGGAATCATTGGT+GGG 0.593455 3_1:-4057583 None:intergenic
TACTTCTACCATAAAACCTG+TGG 0.593458 3_1:-4064694 None:intergenic
TCATCTTCGGCAACAACAGT+CGG 0.593670 3_1:+4060446 Msa0345050:CDS
GATGGAGATGGAATCATTGG+TGG 0.594177 3_1:-4057584 None:intergenic
CAGCCTTTGCAAGCACACTC+AGG 0.597155 3_1:-4060696 None:intergenic
GTAAGAGCTGGAAGTTACAG+TGG 0.600311 3_1:+4062833 Msa0345050:CDS
GTTGCCTCTTCAGCTTGCTG+CGG 0.600797 3_1:+4057928 Msa0345050:CDS
AGGCCTGAGTGTGCTTGCAA+AGG 0.601784 3_1:+4060693 Msa0345050:CDS
TAGAAAGTGCTGCAGCTGAA+GGG 0.602703 3_1:+4064076 Msa0345050:CDS
AGGACGTCTTCATCATCTGG+TGG 0.603910 3_1:-4061313 None:intergenic
TCCATCAATCAAACCTTGTG+AGG 0.609109 3_1:+4057601 Msa0345050:CDS
TCTACAGTTTGATATCCTAT+GGG 0.609822 3_1:+4062602 Msa0345050:intron
TGTTATGATTTCATTTGGAG+CGG 0.613234 3_1:+4057647 Msa0345050:CDS
GGGATAACTCCAGTAACTGA+TGG 0.616241 3_1:+4062075 Msa0345050:CDS
TCCCAAATGAAATGGGTGTG+AGG 0.617777 3_1:+4061078 Msa0345050:CDS
TCACTAAAATGAATAGCACC+AGG 0.621112 3_1:-4057812 None:intergenic
ACAGTTTGATATCCTATGGG+AGG 0.622018 3_1:+4062605 Msa0345050:intron
AGTTTCGTACAATTGTTGAG+AGG 0.622075 3_1:+4057684 Msa0345050:CDS
TGTGATTCCTCATGAAAGAG+AGG 0.624747 3_1:+4063447 Msa0345050:CDS
CTGGTTATCATGGCTAACCT+GGG 0.627124 3_1:+4060141 Msa0345050:CDS
ACTCCAGTAACTGATGGAGA+TGG 0.628421 3_1:+4062081 Msa0345050:CDS
CTGGTATGGATCCAATAACA+AGG 0.631438 3_1:+4063023 Msa0345050:CDS
TGTCAAGGTCAAAGTCACTA+GGG 0.633353 3_1:-4064100 None:intergenic
CCGTCTCCTGTCCAATAACG+AGG 0.638033 3_1:-4061125 None:intergenic
GACCAGACAAAGCCTCCCAT+AGG 0.638746 3_1:-4062617 None:intergenic
ATTGGCAGAGGTGAGACTCA+CGG 0.644251 3_1:+4062799 Msa0345050:CDS
TGGAATCGGATATGTCGAGA+TGG 0.644377 3_1:+4065014 Msa0345050:three_prime_UTR
GTGAAGCAGCAACAAACACA+AGG 0.646193 3_1:+4061352 Msa0345050:CDS
CGATGACTGTGTGCTGACAA+TGG 0.647516 3_1:+4060780 Msa0345050:CDS
AACGAACCACAGAAAGAATG+TGG 0.650200 3_1:-4061030 None:intergenic
AGAGCTGGAAGTTACAGTGG+AGG 0.650512 3_1:+4062836 Msa0345050:CDS
AATAACAAGGAGGCATGTGT+GGG 0.650686 3_1:+4063036 Msa0345050:CDS
AGCATCAGCAAGACATCGTG+AGG 0.651351 3_1:+4063276 Msa0345050:CDS
GGCATTGTGAAGACTTACCC+CGG 0.651356 3_1:+4061409 Msa0345050:CDS
CATCCAAAATGACTAATTTG+GGG 0.651859 3_1:-4062901 None:intergenic
AGGAGTGCCTCTCTTTCATG+AGG 0.652639 3_1:-4063454 None:intergenic
CCTTGAGCAAAAGGATTAGG+CGG 0.654792 3_1:-4060673 None:intergenic
CTCCAAATGAAATCATAACA+CGG 0.654878 3_1:-4057644 None:intergenic
ATAGCACCAGGACATTGCAT+AGG 0.656866 3_1:-4057800 None:intergenic
GAGTCTACTGAATACCCCAC+AGG 0.659329 3_1:+4064678 Msa0345050:CDS
GTAGTTGCATATCTTCAACC+CGG 0.661373 3_1:+4061275 Msa0345050:CDS
CAGATGGTGTCAACAGTAGG+CGG 0.665256 3_1:+4060604 Msa0345050:intron
ATAAATCTCGGTAATGACCA+GGG 0.666011 3_1:-4060639 None:intergenic
TCTACTAGTGTTCAGAAACG+TGG 0.672332 3_1:+4057875 Msa0345050:CDS
TCTATTAGGACCCAATGGAG+CGG 0.674018 3_1:+4062023 Msa0345050:CDS
CTGCTACTGCAAGACAACGC+CGG 0.674437 3_1:+4064802 Msa0345050:CDS
AACCAAATTTAAATATACCG+GGG 0.682377 3_1:-4061426 None:intergenic
TTCAACTCCTGAAGATAACG+GGG 0.682515 3_1:+4060720 Msa0345050:CDS
GATAGGCAATGACCGTGATG+GGG 0.683113 3_1:+4060101 Msa0345050:intron
AGAGTCGTAAAGCCCCATCA+CGG 0.695740 3_1:-4060113 None:intergenic
ACGTGACTTCAATCTGATCG+AGG 0.695850 3_1:-4063182 None:intergenic
CGTTATTGGACAGGAGACGG+AGG 0.708980 3_1:+4061128 Msa0345050:CDS
TACTGGGAACAAGATGACAC+CGG 0.712706 3_1:+4064717 Msa0345050:CDS
CTTCTACCATAAAACCTGTG+GGG 0.715948 3_1:-4064692 None:intergenic
GATGATTTACCTTAACAGCG+TGG 0.717695 3_1:-4061480 None:intergenic
GGGGTTAGCTGGAATACACG+AGG 0.756377 3_1:+4060739 Msa0345050:CDS
GTATGGATCCAATAACAAGG+AGG 0.783240 3_1:+4063026 Msa0345050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATTTAATTTTTAAT+TGG + chr3_1:4059253-4059272 Msa0345050:intron 0.0%
!!! CTTTATTTAAAATCAAAATA+TGG + chr3_1:4058662-4058681 Msa0345050:intron 10.0%
!!! AATAATAAAAGTTACAATTT+TGG + chr3_1:4059198-4059217 Msa0345050:intron 10.0%
!!! ATTATTTAATTTTTAATTGG+AGG + chr3_1:4059256-4059275 Msa0345050:intron 10.0%
!!! TAATTTTAATATTAGAAGTT+AGG + chr3_1:4061511-4061530 Msa0345050:intron 10.0%
!!! AATTTTAATATTAGAAGTTA+GGG + chr3_1:4061512-4061531 Msa0345050:intron 10.0%
!!! AGAATTGTTTTTTAAATAGA+CGG + chr3_1:4058592-4058611 Msa0345050:intron 15.0%
!! ATATTCTAAATTCTAATTGA+TGG + chr3_1:4059437-4059456 Msa0345050:intron 15.0%
!! TATATATCAACAATATCTAT+TGG - chr3_1:4059809-4059828 None:intergenic 15.0%
!! ATGTAAAATAATTTAACAGA+TGG - chr3_1:4061846-4061865 None:intergenic 15.0%
!! TATATATATATTCCAAATGT+TGG + chr3_1:4062181-4062200 Msa0345050:intron 15.0%
!! AGATTATAAAATTTGGTAAA+TGG - chr3_1:4062585-4062604 None:intergenic 15.0%
!! AAACTGTAGATTATAAAATT+TGG - chr3_1:4062592-4062611 None:intergenic 15.0%
!! TGAAATTATTAATAACCATT+AGG + chr3_1:4062743-4062762 Msa0345050:intron 15.0%
!! ATAATTGAAAATGCAAAAAA+AGG + chr3_1:4063061-4063080 Msa0345050:CDS 15.0%
!! TAATTGAAAATGCAAAAAAA+GGG + chr3_1:4063062-4063081 Msa0345050:CDS 15.0%
!!! AAAAAATACAAAACCATTTT+AGG + chr3_1:4064516-4064535 Msa0345050:intron 15.0%
!!! AAAAATACAAAACCATTTTA+GGG + chr3_1:4064517-4064536 Msa0345050:intron 15.0%
!!! TCGCATTAATATTTTTTTTT+TGG + chr3_1:4064958-4064977 Msa0345050:three_prime_UTR 15.0%
!!! ATATTTTTTTTTTGGTTACA+AGG + chr3_1:4064966-4064985 Msa0345050:three_prime_UTR 15.0%
!! AAAAAAACATATTACTCTCA+TGG + chr3_1:4057435-4057454 Msa0345050:CDS 20.0%
!!! ATTCATTTTAGTGAAAAGAA+TGG + chr3_1:4057821-4057840 Msa0345050:CDS 20.0%
!!! AATGGAAGTATTATTAGTTA+TGG + chr3_1:4057839-4057858 Msa0345050:CDS 20.0%
!!! ATGGAAGTATTATTAGTTAT+GGG + chr3_1:4057840-4057859 Msa0345050:CDS 20.0%
!!! AAATCAAAATATGGGTTTTA+TGG + chr3_1:4058671-4058690 Msa0345050:intron 20.0%
!! AGAATTATGATCAAAATCAA+TGG + chr3_1:4058738-4058757 Msa0345050:intron 20.0%
!!! AAAATCTGGGTTTAAAATTT+TGG + chr3_1:4058984-4059003 Msa0345050:intron 20.0%
!!! TGGAACTACAATTTTAAAAT+TGG + chr3_1:4059143-4059162 Msa0345050:intron 20.0%
!! TTGTTGATATATAGAAAACA+AGG + chr3_1:4059816-4059835 Msa0345050:intron 20.0%
!!! CATATCAAGGTTTTAAATAA+AGG - chr3_1:4059958-4059977 None:intergenic 20.0%
!!! TTATTTTATCTATTTGCAGA+TGG + chr3_1:4060588-4060607 Msa0345050:intron 20.0%
!! TATGGTTCAAATAATTTACT+CGG + chr3_1:4060961-4060980 Msa0345050:intron 20.0%
!! GACAGAATGATATTTATATA+CGG + chr3_1:4061000-4061019 Msa0345050:intron 20.0%
!! AATATAATCCCAAATGAAAT+GGG + chr3_1:4061071-4061090 Msa0345050:CDS 20.0%
!! AAAATTAAATCCATGTTGTA+TGG - chr3_1:4061780-4061799 None:intergenic 20.0%
!! TTATTCTCAAATTACTTTCA+GGG + chr3_1:4061964-4061983 Msa0345050:intron 20.0%
!!! AATCAGTTATTTTGTCTATT+AGG + chr3_1:4062009-4062028 Msa0345050:CDS 20.0%
!! TATATACGCAATCTTAATAT+AGG - chr3_1:4062550-4062569 None:intergenic 20.0%
!!! ATACTGATTTTATAGAATCT+GGG - chr3_1:4062683-4062702 None:intergenic 20.0%
!! TTTCAAATAATACAAACTAG+CGG - chr3_1:4062728-4062747 None:intergenic 20.0%
!!! AAAGCATATATTTTCTCAAA+AGG + chr3_1:4062961-4062980 Msa0345050:intron 20.0%
!!! AATTTGAGTTATTTACCTAT+AGG - chr3_1:4063647-4063666 None:intergenic 20.0%
!! AAATGCAGTTAAAAAATCTA+CGG - chr3_1:4063799-4063818 None:intergenic 20.0%
! ATTAGGAAAATGAAGAAGAT+TGG - chr3_1:4057497-4057516 None:intergenic 25.0%
! AGGATAATTAAGAATAATCC+TGG + chr3_1:4057704-4057723 Msa0345050:CDS 25.0%
!!! ATAAGAATGAAGTTGATGAT+TGG + chr3_1:4057765-4057784 Msa0345050:CDS 25.0%
!!! ATCGTTGTTTTTTAAATAGC+TGG + chr3_1:4058010-4058029 Msa0345050:intron 25.0%
!! TTTTAAATAGCTGACATGTT+TGG + chr3_1:4058259-4058278 Msa0345050:intron 25.0%
!! TTTTAAATAGCTGATGTGTT+TGG + chr3_1:4058417-4058436 Msa0345050:intron 25.0%
!! GATCAAGGTTTAAAACAAAA+GGG - chr3_1:4058629-4058648 None:intergenic 25.0%
!! TGATCAAGGTTTAAAACAAA+AGG - chr3_1:4058630-4058649 None:intergenic 25.0%
!!! AGAGTAAACAATTTTGATCA+AGG - chr3_1:4058644-4058663 None:intergenic 25.0%
! ATACCATAACCATTACTAAT+TGG - chr3_1:4058847-4058866 None:intergenic 25.0%
! TCGTTTGTATAATCAAAATC+TGG + chr3_1:4058970-4058989 Msa0345050:intron 25.0%
! CGTTTGTATAATCAAAATCT+GGG + chr3_1:4058971-4058990 Msa0345050:intron 25.0%
! AATGATATTGCATAGAATTG+TGG + chr3_1:4059038-4059057 Msa0345050:intron 25.0%
!!! TCAAAGTCAGGTTTTAAAAT+TGG + chr3_1:4059102-4059121 Msa0345050:intron 25.0%
!! AATTGGAACTACAATTTTTG+TGG + chr3_1:4059119-4059138 Msa0345050:intron 25.0%
!! TTGGAACTACAATTTTTGTA+TGG + chr3_1:4059162-4059181 Msa0345050:intron 25.0%
!!! AAAGTCAAGGTTTTAAATAG+CGG + chr3_1:4059286-4059305 Msa0345050:intron 25.0%
! TATTGATCTTAGTATTCACA+TGG - chr3_1:4059783-4059802 None:intergenic 25.0%
! TGTGAATACTAAGATCAATA+TGG + chr3_1:4059783-4059802 Msa0345050:intron 25.0%
!! AAACACTTTAGTTCATATCA+AGG - chr3_1:4059971-4059990 None:intergenic 25.0%
!! ACAGAAAGTATAAATGGTAA+AGG - chr3_1:4060309-4060328 None:intergenic 25.0%
!! GAAAAGACAGAAAGTATAAA+TGG - chr3_1:4060315-4060334 None:intergenic 25.0%
!! ATACTTTCTGTCTTTTCATT+TGG + chr3_1:4060318-4060337 Msa0345050:intron 25.0%
!! TACTTTCTGTCTTTTCATTT+GGG + chr3_1:4060319-4060338 Msa0345050:intron 25.0%
! TCTGTATTATGTGAATTTGA+TGG + chr3_1:4060347-4060366 Msa0345050:intron 25.0%
! AAACAAAAGGAGAAAATACT+AGG - chr3_1:4060384-4060403 None:intergenic 25.0%
! TTTCATTCGTAAATCATCTT+CGG + chr3_1:4060433-4060452 Msa0345050:CDS 25.0%
! GAAACAATAACCATAAATCT+CGG - chr3_1:4060654-4060673 None:intergenic 25.0%
!! TCTTAAATGGAAACAAGTTT+TGG - chr3_1:4060846-4060865 None:intergenic 25.0%
! AAAGTCAAAGTCTTCTTAAA+TGG - chr3_1:4060859-4060878 None:intergenic 25.0%
! TGGAACATATTCATCTAAAA+GGG - chr3_1:4060887-4060906 None:intergenic 25.0%
! ATGGAACATATTCATCTAAA+AGG - chr3_1:4060888-4060907 None:intergenic 25.0%
!! TTTTAGATGAATATGTTCCA+TGG + chr3_1:4060887-4060906 Msa0345050:intron 25.0%
! TAAAAGGAAATATAGAACCA+TGG - chr3_1:4060907-4060926 None:intergenic 25.0%
! GATTATATTGTCAAAGTAGA+TGG - chr3_1:4061060-4061079 None:intergenic 25.0%
! CAATATAATCCCAAATGAAA+TGG + chr3_1:4061070-4061089 Msa0345050:CDS 25.0%
! ATGAAAGAAATGCGAAAAAA+CGG - chr3_1:4061241-4061260 None:intergenic 25.0%
! AACCAAATTTAAATATACCG+GGG - chr3_1:4061429-4061448 None:intergenic 25.0%
! CAACCAAATTTAAATATACC+GGG - chr3_1:4061430-4061449 None:intergenic 25.0%
! GCAACCAAATTTAAATATAC+CGG - chr3_1:4061431-4061450 None:intergenic 25.0%
!! TTTTGCATGAAAAAAGACAA+AGG - chr3_1:4061558-4061577 None:intergenic 25.0%
!! CTGAAATATTTTCCATTAGT+TGG + chr3_1:4061715-4061734 Msa0345050:intron 25.0%
! TTGTATGATTGTTTAAGAGA+TGG - chr3_1:4061803-4061822 None:intergenic 25.0%
! TATTGAAACACGAAATATGT+GGG - chr3_1:4061875-4061894 None:intergenic 25.0%
! ATATTGAAACACGAAATATG+TGG - chr3_1:4061876-4061895 None:intergenic 25.0%
! CGTGTTTCAATATGAAAATT+TGG + chr3_1:4061883-4061902 Msa0345050:intron 25.0%
!! GATTGTAATTTTCTCCTAAT+AGG + chr3_1:4061910-4061929 Msa0345050:intron 25.0%
! GTTATTCTCAAATTACTTTC+AGG + chr3_1:4061963-4061982 Msa0345050:intron 25.0%
! TCTTTCTTTAAACCAACATT+TGG - chr3_1:4062196-4062215 None:intergenic 25.0%
! TACAAGAAAATAATGAGAGA+TGG - chr3_1:4062332-4062351 None:intergenic 25.0%
! GCTCTAATATCATATTGAAT+TGG + chr3_1:4062453-4062472 Msa0345050:intron 25.0%
!! AATTTTCTGATTGTCTAACT+CGG + chr3_1:4062476-4062495 Msa0345050:intron 25.0%
!!! AACTCTTCTCTAGAATTAAA+GGG + chr3_1:4062652-4062671 Msa0345050:CDS 25.0%
!!! TACTGATTTTATAGAATCTG+GGG - chr3_1:4062682-4062701 None:intergenic 25.0%
!!! CATACTGATTTTATAGAATC+TGG - chr3_1:4062684-4062703 None:intergenic 25.0%
! ATAAAATCAGTATGTTATCC+AGG + chr3_1:4062690-4062709 Msa0345050:intron 25.0%
! TCATCCAAAATGACTAATTT+GGG - chr3_1:4062905-4062924 None:intergenic 25.0%
! TTCATCCAAAATGACTAATT+TGG - chr3_1:4062906-4062925 None:intergenic 25.0%
!! ATTCTTATTTCTTAGACTAC+TGG + chr3_1:4063004-4063023 Msa0345050:intron 25.0%
!! AATATTTTCGCGACAAAAAT+TGG + chr3_1:4063349-4063368 Msa0345050:intron 25.0%
! ACACAAAATGAATCATAACA+TGG + chr3_1:4063881-4063900 Msa0345050:intron 25.0%
!! CAAATTCTTCTTTTCTATCT+TGG - chr3_1:4063984-4064003 None:intergenic 25.0%
! CAAGATAGAAAAGAAGAATT+TGG + chr3_1:4063982-4064001 Msa0345050:CDS 25.0%
! CTCAATAAATCAATTCAAAC+AGG - chr3_1:4064264-4064283 None:intergenic 25.0%
!!! CTATTTCCATAAGTTGTTTT+CGG + chr3_1:4064327-4064346 Msa0345050:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr3_1:4064473-4064492 Msa0345050:intron 25.0%
!!! TTTTTACCAGTACTAGTTTA+TGG - chr3_1:4064500-4064519 None:intergenic 25.0%
!!! TTTTATGGTAGAAGTATACT+GGG + chr3_1:4064701-4064720 Msa0345050:CDS 25.0%
! AAATGAAAGGAAATAGAGAA+TGG + chr3_1:4064926-4064945 Msa0345050:three_prime_UTR 25.0%
!!! TGTTTTTTTTAAGCAACGCT+TGG - chr3_1:4057424-4057443 None:intergenic 30.0%
! TGCTTTTATTGCTTTGTCTA+TGG - chr3_1:4057525-4057544 None:intergenic 30.0%
CTCCAAATGAAATCATAACA+CGG - chr3_1:4057647-4057666 None:intergenic 30.0%
TGTTATGATTTCATTTGGAG+CGG + chr3_1:4057647-4057666 Msa0345050:CDS 30.0%
TCAACAATTGTACGAAACTT+CGG - chr3_1:4057683-4057702 None:intergenic 30.0%
TAGAGAAATACCTGTTGAAA+AGG + chr3_1:4057727-4057746 Msa0345050:CDS 30.0%
GATGCTATTAGTACTAGTTA+CGG + chr3_1:4058071-4058090 Msa0345050:intron 30.0%
! TTTTAAATAGCTGACATGTC+TGG + chr3_1:4058134-4058153 Msa0345050:intron 30.0%
ACTAGTACTAATTGTGTGTT+CGG - chr3_1:4058203-4058222 None:intergenic 30.0%
! TATGGTCTTAGTTATAGTCA+TGG + chr3_1:4058689-4058708 Msa0345050:intron 30.0%
TGCATTCATCCAATTAGTAA+TGG + chr3_1:4058835-4058854 Msa0345050:intron 30.0%
CATCCAATTAGTAATGGTTA+TGG + chr3_1:4058841-4058860 Msa0345050:intron 30.0%
!! TTTGGTCTTAGTTATAGTCA+TGG + chr3_1:4059002-4059021 Msa0345050:intron 30.0%
ACTTTGATTATTCCTCCAAT+TGG - chr3_1:4059089-4059108 None:intergenic 30.0%
GTACTAAAAAATGTCGATCA+AGG - chr3_1:4059230-4059249 None:intergenic 30.0%
! ACCAAATGAAGTGTCAATTA+TGG + chr3_1:4059361-4059380 Msa0345050:intron 30.0%
ACCATAATTGACACTTCATT+TGG - chr3_1:4059365-4059384 None:intergenic 30.0%
! AATTTTTGCATTCTCAACAC+AGG - chr3_1:4059691-4059710 None:intergenic 30.0%
ATTTGAAGAATATAGGCACT+AGG - chr3_1:4059718-4059737 None:intergenic 30.0%
TGCCTATATTCTTCAAATAC+TGG + chr3_1:4059720-4059739 Msa0345050:intron 30.0%
GACCAGTATTTGAAGAATAT+AGG - chr3_1:4059725-4059744 None:intergenic 30.0%
ACTAAGGTGTACTAATTCTA+AGG - chr3_1:4059760-4059779 None:intergenic 30.0%
!! AATCATGTTTGTTGTTGTCA+TGG + chr3_1:4060065-4060084 Msa0345050:intron 30.0%
!!! TTTCTCCTTTTGTTTTAGAC+TGG + chr3_1:4060389-4060408 Msa0345050:intron 30.0%
!!! TTCTCCTTTTGTTTTAGACT+GGG + chr3_1:4060390-4060409 Msa0345050:intron 30.0%
AATGAAAGCTGATAACAAGA+AGG - chr3_1:4060420-4060439 None:intergenic 30.0%
TACTGAGTACTTCAAATCAA+TGG + chr3_1:4060542-4060561 Msa0345050:intron 30.0%
AATCTTACTGAAATGCTGAA+TGG - chr3_1:4060940-4060959 None:intergenic 30.0%
AGCATTTCAGTAAGATTCTA+TGG + chr3_1:4060943-4060962 Msa0345050:intron 30.0%
TGATATTTATATACGGCTTC+TGG + chr3_1:4061007-4061026 Msa0345050:CDS 30.0%
ACTTTCTAAATCCTCGTTAT+TGG + chr3_1:4061114-4061133 Msa0345050:CDS 30.0%
! TTTTCGCATTTCTTTCATAG+AGG + chr3_1:4061243-4061262 Msa0345050:intron 30.0%
TTTCGCATTTCTTTCATAGA+GGG + chr3_1:4061244-4061263 Msa0345050:intron 30.0%
! TCACAACATTTTCTTCTTCA+AGG - chr3_1:4061336-4061355 None:intergenic 30.0%
TACCCCGGTATATTTAAATT+TGG + chr3_1:4061424-4061443 Msa0345050:CDS 30.0%
TTTCAGATATAAGAGCCTTT+GGG - chr3_1:4061701-4061720 None:intergenic 30.0%
ATTTCAGATATAAGAGCCTT+TGG - chr3_1:4061702-4061721 None:intergenic 30.0%
ATCATACAAACTGAATATGC+AGG + chr3_1:4061814-4061833 Msa0345050:intron 30.0%
!! TCCTTTACAGCATTGATTTA+TGG + chr3_1:4062234-4062253 Msa0345050:intron 30.0%
!! CCTTTACAGCATTGATTTAT+GGG + chr3_1:4062235-4062254 Msa0345050:intron 30.0%
!! AGCATTGATTTATGGGAATT+CGG + chr3_1:4062242-4062261 Msa0345050:intron 30.0%
ATCTACAGTTTGATATCCTA+TGG + chr3_1:4062601-4062620 Msa0345050:intron 30.0%
TCTACAGTTTGATATCCTAT+GGG + chr3_1:4062602-4062621 Msa0345050:intron 30.0%
!! GAACTCTTCTCTAGAATTAA+AGG + chr3_1:4062651-4062670 Msa0345050:CDS 30.0%
! ATTTTCAGCAGATTTCCTAA+TGG - chr3_1:4062761-4062780 None:intergenic 30.0%
GTAGATTACAGAAACATCAT+TGG + chr3_1:4062781-4062800 Msa0345050:intron 30.0%
CATCCAAAATGACTAATTTG+GGG - chr3_1:4062904-4062923 None:intergenic 30.0%
!! ATTAGTCATTTTGGATGAAC+CGG + chr3_1:4062907-4062926 Msa0345050:CDS 30.0%
! ATATATCCTCTTTTGCATAC+CGG - chr3_1:4062929-4062948 None:intergenic 30.0%
TATTTCTTAGACTACTGGTA+TGG + chr3_1:4063009-4063028 Msa0345050:intron 30.0%
AGAATGTGTTGTGAGAATAA+TGG - chr3_1:4063092-4063111 None:intergenic 30.0%
TATTCTCACAACACATTCTA+TGG + chr3_1:4063093-4063112 Msa0345050:CDS 30.0%
TGCTGCAAAAAACAATTCAT+GGG - chr3_1:4063382-4063401 None:intergenic 30.0%
ATGCTGCAAAAAACAATTCA+TGG - chr3_1:4063383-4063402 None:intergenic 30.0%
TTTAGATGTAGTACCAAAAG+AGG + chr3_1:4063402-4063421 Msa0345050:CDS 30.0%
! AAGTTATTGTTCTCCTCTTT+TGG - chr3_1:4063418-4063437 None:intergenic 30.0%
AGAAAAGAAAGCTTACTGTA+AGG - chr3_1:4063477-4063496 None:intergenic 30.0%
! TACAGTAAGCTTTCTTTTCT+TGG + chr3_1:4063477-4063496 Msa0345050:intron 30.0%
! ATTTACCTATAGGTGTTATG+AGG - chr3_1:4063637-4063656 None:intergenic 30.0%
! GAATAGGTTTTCATGCATAA+AGG - chr3_1:4063708-4063727 None:intergenic 30.0%
AATCATAACATGGAAGATTG+TGG + chr3_1:4063891-4063910 Msa0345050:intron 30.0%
TTTCTTGAATATTGCAAAGC+AGG + chr3_1:4064047-4064066 Msa0345050:CDS 30.0%
TCAATTTCTTGAGAATTGAG+AGG - chr3_1:4064176-4064195 None:intergenic 30.0%
! TCAAGAAATTGAGTTCTAGT+TGG + chr3_1:4064184-4064203 Msa0345050:intron 30.0%
CGAAAACAACTTATGGAAAT+AGG - chr3_1:4064329-4064348 None:intergenic 30.0%
AATAAGCCGAAAACAACTTA+TGG - chr3_1:4064336-4064355 None:intergenic 30.0%
CTTATTTCGATAAGTTCTTG+AGG + chr3_1:4064350-4064369 Msa0345050:intron 30.0%
! AAAAAGAGTAATCTCTAGAG+AGG - chr3_1:4064547-4064566 None:intergenic 30.0%
CAAAAAATTGCTAGTTGTCA+TGG - chr3_1:4064595-4064614 None:intergenic 30.0%
! ATAATTTTGCAGATTCCTGT+AGG + chr3_1:4064627-4064646 Msa0345050:intron 30.0%
!! GTTTTATGGTAGAAGTATAC+TGG + chr3_1:4064700-4064719 Msa0345050:CDS 30.0%
! AAGTTAGTTCAGACGTTTTT+CGG + chr3_1:4064862-4064881 Msa0345050:CDS 30.0%
ACTCAGGATAGAAAAATGAA+AGG + chr3_1:4064913-4064932 Msa0345050:three_prime_UTR 30.0%
! CTTGTATATGTTTTGTCAGT+TGG + chr3_1:4064994-4065013 Msa0345050:three_prime_UTR 30.0%
! TATGTTTTGTCAGTTGGAAT+CGG + chr3_1:4065000-4065019 Msa0345050:three_prime_UTR 30.0%
AAATGAAGAAGATTGGTGAG+AGG - chr3_1:4057490-4057509 None:intergenic 35.0%
ATTGATGGAGATGGAATCAT+TGG - chr3_1:4057590-4057609 None:intergenic 35.0%
ATGAAGAATTTCTCCTCACA+AGG - chr3_1:4057617-4057636 None:intergenic 35.0%
TGCCGTGTTATGATTTCATT+TGG + chr3_1:4057642-4057661 Msa0345050:CDS 35.0%
AGTTTCGTACAATTGTTGAG+AGG + chr3_1:4057684-4057703 Msa0345050:CDS 35.0%
! AAACTCTTCACCTTTTCAAC+AGG - chr3_1:4057740-4057759 None:intergenic 35.0%
TCACTAAAATGAATAGCACC+AGG - chr3_1:4057815-4057834 None:intergenic 35.0%
GGCAACTGAAAATCAAAAGT+AGG - chr3_1:4057914-4057933 None:intergenic 35.0%
GAAATCGCTAGGTTTCTTAT+TGG + chr3_1:4057956-4057975 Msa0345050:CDS 35.0%
GAGTACATCAGAATCATGAT+GGG + chr3_1:4058166-4058185 Msa0345050:intron 35.0%
AGGTAAGTTTGTCAGAATCA+CGG + chr3_1:4058287-4058306 Msa0345050:intron 35.0%
ACTGGTACTACTTGTATGTT+CGG - chr3_1:4058352-4058371 None:intergenic 35.0%
CATACAAGTAGTACCAGTTA+TGG + chr3_1:4058354-4058373 Msa0345050:intron 35.0%
!! AGCTGACATGTTTGTTATCT+CGG + chr3_1:4058559-4058578 Msa0345050:intron 35.0%
TAATTGGATGAATGCACGTT+TGG - chr3_1:4058831-4058850 None:intergenic 35.0%
ACGGATAAATTTGACAGATG+TGG + chr3_1:4058880-4058899 Msa0345050:intron 35.0%
CTGATGTATGTAGTTCCAAT+TGG + chr3_1:4059071-4059090 Msa0345050:intron 35.0%
ATGTATGTAGTTCCAATTGG+AGG + chr3_1:4059074-4059093 Msa0345050:intron 35.0%
TTGGAGGAATAATCAAAGTC+AGG + chr3_1:4059090-4059109 Msa0345050:intron 35.0%
! GGAACTACAATTTTTGTGGT+TGG + chr3_1:4059123-4059142 Msa0345050:intron 35.0%
TGGAGGAATAATCAAAGTCA+AGG + chr3_1:4059091-4059110 Msa0345050:intron 35.0%
ATTGACACTTCATTTGGTTG+TGG - chr3_1:4059359-4059378 None:intergenic 35.0%
! TGAAGTGTCAATTATGGTCA+CGG + chr3_1:4059367-4059386 Msa0345050:intron 35.0%
! CAAGTGGAATGTGTTTTTCA+AGG + chr3_1:4059487-4059506 Msa0345050:CDS 35.0%
ATTGATCCAACTGTAGAGAA+AGG - chr3_1:4059536-4059555 None:intergenic 35.0%
TTTCTCTACAGTTGGATCAA+TGG + chr3_1:4059535-4059554 Msa0345050:CDS 35.0%
TTCTCTACAGTTGGATCAAT+GGG + chr3_1:4059536-4059555 Msa0345050:CDS 35.0%
GCAGTTGCAAGAAAAAATGT+TGG - chr3_1:4059563-4059582 None:intergenic 35.0%
CGTTCTTCAGATAAGTTCAT+TGG + chr3_1:4059595-4059614 Msa0345050:CDS 35.0%
! CTTAGTATTCACATGGACTA+AGG - chr3_1:4059776-4059795 None:intergenic 35.0%
GTGGTTAAATGTAGCTGATA+TGG + chr3_1:4059879-4059898 Msa0345050:intron 35.0%
TCTTAATCGTTGTTGCGTTA+CGG + chr3_1:4059902-4059921 Msa0345050:intron 35.0%
!! TTGTCATGGCGTTTTTGTTT+GGG + chr3_1:4060079-4060098 Msa0345050:intron 35.0%
CTTCCTATTTGAACTCAACA+TGG + chr3_1:4060270-4060289 Msa0345050:CDS 35.0%
TCACCATGTTGAGTTCAAAT+AGG - chr3_1:4060276-4060295 None:intergenic 35.0%
! CAAACCCAGTCTAAAACAAA+AGG - chr3_1:4060397-4060416 None:intergenic 35.0%
CATGAAGCCGACAATAAATA+CGG - chr3_1:4060477-4060496 None:intergenic 35.0%
CTTCTCATTCTTTCATGACA+AGG + chr3_1:4060517-4060536 Msa0345050:intron 35.0%
ATAAATCTCGGTAATGACCA+GGG - chr3_1:4060642-4060661 None:intergenic 35.0%
GTTTCAACTCCTGAAGATAA+CGG + chr3_1:4060718-4060737 Msa0345050:CDS 35.0%
TTTCAACTCCTGAAGATAAC+GGG + chr3_1:4060719-4060738 Msa0345050:CDS 35.0%
!! ATGGAAACAAGTTTTGGTGT+TGG - chr3_1:4060840-4060859 None:intergenic 35.0%
TACTGAAATGCTGAATGGAA+GGG - chr3_1:4060935-4060954 None:intergenic 35.0%
TTACTGAAATGCTGAATGGA+AGG - chr3_1:4060936-4060955 None:intergenic 35.0%
ATGCAAAACAACTGCTCATA+GGG + chr3_1:4061570-4061589 Msa0345050:intron 35.0%
TTCAGATATAAGAGCCTTTG+GGG - chr3_1:4061700-4061719 None:intergenic 35.0%
TGCAATTCTACCATACAACA+TGG + chr3_1:4061767-4061786 Msa0345050:intron 35.0%
AAATTACTTTCAGGGCTTGT+GGG + chr3_1:4061972-4061991 Msa0345050:intron 35.0%
! TTTTGTCTATTAGGACCCAA+TGG + chr3_1:4062018-4062037 Msa0345050:CDS 35.0%
ACAGCTATTAGTTGTTTGAC+AGG + chr3_1:4062054-4062073 Msa0345050:CDS 35.0%
CAGCTATTAGTTGTTTGACA+GGG + chr3_1:4062055-4062074 Msa0345050:CDS 35.0%
CCCATAAATCAATGCTGTAA+AGG - chr3_1:4062238-4062257 None:intergenic 35.0%
GGCAAACTTAATTCTAACAG+TGG - chr3_1:4062369-4062388 None:intergenic 35.0%
AGACGTTGCTATATCTATCA+GGG + chr3_1:4062393-4062412 Msa0345050:intron 35.0%
CGCACAACTTGTATTTATAG+TGG + chr3_1:4062501-4062520 Msa0345050:intron 35.0%
! TAATTCTAGAGAAGAGTTCG+AGG - chr3_1:4062650-4062669 None:intergenic 35.0%
AGTGTTGCAATTGCACTTAT+CGG + chr3_1:4062875-4062894 Msa0345050:CDS 35.0%
! TGACCCCAAATTAGTCATTT+TGG + chr3_1:4062898-4062917 Msa0345050:CDS 35.0%
! ATCAGATTGAAGTCACGTTT+TGG + chr3_1:4063187-4063206 Msa0345050:CDS 35.0%
CATGAGGAATCACATAAGTT+AGG - chr3_1:4063441-4063460 None:intergenic 35.0%
TAATCAGCATAACTGTAGCA+TGG - chr3_1:4063537-4063556 None:intergenic 35.0%
TATAGCCTCATAACACCTAT+AGG + chr3_1:4063629-4063648 Msa0345050:intron 35.0%
TTTCATGCATAAAGGAGACA+CGG - chr3_1:4063700-4063719 None:intergenic 35.0%
CAGACAGGATTCATTTGAAT+AGG - chr3_1:4063724-4063743 None:intergenic 35.0%
TGTAACATTAAGCAACAGAC+AGG - chr3_1:4063739-4063758 None:intergenic 35.0%
CTACGGACAAATGCAAATTT+AGG - chr3_1:4063782-4063801 None:intergenic 35.0%
AAGATTGTGGTTACTTCGAT+TGG + chr3_1:4063904-4063923 Msa0345050:intron 35.0%
! CGTATAACCGCATTTTCTTT+CGG + chr3_1:4064144-4064163 Msa0345050:intron 35.0%
GCATATACCGAAAGAAAATG+CGG - chr3_1:4064154-4064173 None:intergenic 35.0%
! TACTAGTTTATGGTCCTGTT+TGG - chr3_1:4064490-4064509 None:intergenic 35.0%
ACTTCTACCATAAAACCTGT+GGG - chr3_1:4064696-4064715 None:intergenic 35.0%
TACTTCTACCATAAAACCTG+TGG - chr3_1:4064697-4064716 None:intergenic 35.0%
TTGAGGAATATGAGCTTTCT+GGG - chr3_1:4064766-4064785 None:intergenic 35.0%
TTTGAGGAATATGAGCTTTC+TGG - chr3_1:4064767-4064786 None:intergenic 35.0%
! GATGGTAGTTGGATATTTTG+AGG - chr3_1:4064783-4064802 None:intergenic 35.0%
ACGTCTGAACTAACTTGATT+TGG - chr3_1:4064858-4064877 None:intergenic 35.0%
! TGATTCATGCTCAGTGATTT+TGG + chr3_1:4064885-4064904 Msa0345050:exon 35.0%
! GATTCATGCTCAGTGATTTT+GGG + chr3_1:4064886-4064905 Msa0345050:exon 35.0%
TATGTCGAGATGGAAGAATT+TGG + chr3_1:4065024-4065043 Msa0345050:three_prime_UTR 35.0%
! TCTGTTTTGTGTGACAGAGA+GGG - chr3_1:4057340-4057359 None:intergenic 40.0%
! CATGACAAACGCTTTTACGT+TGG + chr3_1:4057385-4057404 Msa0345050:exon 40.0%
CTTTGTCTATGGCGAAGATT+AGG - chr3_1:4057514-4057533 None:intergenic 40.0%
ATGGAGATGGAATCATTGGT+GGG - chr3_1:4057586-4057605 None:intergenic 40.0%
CAAGGTTTGATTGATGGAGA+TGG - chr3_1:4057599-4057618 None:intergenic 40.0%
TCCATCAATCAAACCTTGTG+AGG + chr3_1:4057601-4057620 Msa0345050:CDS 40.0%
TCCTCACAAGGTTTGATTGA+TGG - chr3_1:4057605-4057624 None:intergenic 40.0%
TCAACAGGTATTTCTCTACC+AGG - chr3_1:4057725-4057744 None:intergenic 40.0%
AAGAATCCTATGCAATGTCC+TGG + chr3_1:4057794-4057813 Msa0345050:CDS 40.0%
TCTACTAGTGTTCAGAAACG+TGG + chr3_1:4057875-4057894 Msa0345050:CDS 40.0%
ATCGCTAGGTTTCTTATTGG+AGG + chr3_1:4057959-4057978 Msa0345050:CDS 40.0%
! AGCTGGCATGTTTTGTATCA+CGG + chr3_1:4058027-4058046 Msa0345050:intron 40.0%
CGAGTACATCAGAATCATGA+TGG + chr3_1:4058165-4058184 Msa0345050:intron 40.0%
AGCTGACATGTTTGGTATCA+AGG + chr3_1:4058267-4058286 Msa0345050:intron 40.0%
ATCACTACCAATTGCGTGTT+CGG - chr3_1:4058328-4058347 None:intergenic 40.0%
TCTCAGCAGTATACCATAAC+TGG - chr3_1:4058370-4058389 None:intergenic 40.0%
AGCTGATGTGTTTGGTATCA+TGG + chr3_1:4058425-4058444 Msa0345050:intron 40.0%
TGGTGAGTTTGTCAGAATCA+CGG + chr3_1:4058445-4058464 Msa0345050:intron 40.0%
ACAGTGAGTTTGTCAGAATC+AGG + chr3_1:4058789-4058808 Msa0345050:intron 40.0%
CAGTGAGTTTGTCAGAATCA+GGG + chr3_1:4058790-4058809 Msa0345050:intron 40.0%
TGGTATACTGCTGAGAATCA+CGG + chr3_1:4058861-4058880 Msa0345050:intron 40.0%
! GACAGATGTGGTGTGAATTT+TGG + chr3_1:4058892-4058911 Msa0345050:intron 40.0%
!! CAAAATCTTTGATGACGCTG+CGG + chr3_1:4058928-4058947 Msa0345050:intron 40.0%
!!! GTCAAGGTTTTAAATAGCGG+TGG + chr3_1:4059289-4059308 Msa0345050:intron 40.0%
! TTTTAGACCCAGACTTCAAG+TGG + chr3_1:4059471-4059490 Msa0345050:intron 40.0%
ACACATTCCACTTGAAGTCT+GGG - chr3_1:4059481-4059500 None:intergenic 40.0%
AACACATTCCACTTGAAGTC+TGG - chr3_1:4059482-4059501 None:intergenic 40.0%
GACTATGACTATACCATACC+TGG - chr3_1:4059646-4059665 None:intergenic 40.0%
CTTGATATTGCAGAGAGTTG+TGG + chr3_1:4059860-4059879 Msa0345050:intron 40.0%
! GTTGTCATGGCGTTTTTGTT+TGG + chr3_1:4060078-4060097 Msa0345050:intron 40.0%
!! ATGGCGTTTTTGTTTGGGAT+AGG + chr3_1:4060084-4060103 Msa0345050:intron 40.0%
! ACTCTGCATACTGGTTATCA+TGG + chr3_1:4060131-4060150 Msa0345050:CDS 40.0%
! TCTCTTCTCTTAGTTCTCAC+TGG + chr3_1:4060187-4060206 Msa0345050:CDS 40.0%
GGCTTCTCCGTATTTATTGT+CGG + chr3_1:4060467-4060486 Msa0345050:CDS 40.0%
CATAAATCTCGGTAATGACC+AGG - chr3_1:4060643-4060662 None:intergenic 40.0%
CTGGTCATTACCGAGATTTA+TGG + chr3_1:4060641-4060660 Msa0345050:CDS 40.0%
TTCAACTCCTGAAGATAACG+GGG + chr3_1:4060720-4060739 Msa0345050:CDS 40.0%
GAATGGAAGGGAGGAATAAA+AGG - chr3_1:4060923-4060942 None:intergenic 40.0%
AACGAACCACAGAAAGAATG+TGG - chr3_1:4061033-4061052 None:intergenic 40.0%
TCCTCACACCCATTTCATTT+GGG - chr3_1:4061082-4061101 None:intergenic 40.0%
TTCCTCACACCCATTTCATT+TGG - chr3_1:4061083-4061102 None:intergenic 40.0%
CTAAATCCTCGTTATTGGAC+AGG + chr3_1:4061119-4061138 Msa0345050:CDS 40.0%
GCATTTCTTTCATAGAGGGT+GGG + chr3_1:4061248-4061267 Msa0345050:intron 40.0%
GTAGTTGCATATCTTCAACC+CGG + chr3_1:4061275-4061294 Msa0345050:CDS 40.0%
! AATGTTGCTGTTCAGGTACA+AGG + chr3_1:4061388-4061407 Msa0345050:CDS 40.0%
TTTACCTTAACAGCGTGGTA+AGG - chr3_1:4061478-4061497 None:intergenic 40.0%
GATGATTTACCTTAACAGCG+TGG - chr3_1:4061483-4061502 None:intergenic 40.0%
CATGCAAAACAACTGCTCAT+AGG + chr3_1:4061569-4061588 Msa0345050:intron 40.0%
TGCAAAACAACTGCTCATAG+GGG + chr3_1:4061571-4061590 Msa0345050:intron 40.0%
TATCCACAGTTTAACCCCAA+AGG + chr3_1:4061683-4061702 Msa0345050:intron 40.0%
ATGCATAGGTCACTCCTATT+AGG - chr3_1:4061927-4061946 None:intergenic 40.0%
TAATAGGAGTGACCTATGCA+TGG + chr3_1:4061926-4061945 Msa0345050:intron 40.0%
CAAATTACTTTCAGGGCTTG+TGG + chr3_1:4061971-4061990 Msa0345050:intron 40.0%
CTTTCGAATGTTTGACATGC+CGG - chr3_1:4062280-4062299 None:intergenic 40.0%
TAGATATAGCAACGTCTGGT+TGG - chr3_1:4062390-4062409 None:intergenic 40.0%
CTGATAGATATAGCAACGTC+TGG - chr3_1:4062394-4062413 None:intergenic 40.0%
CAGACGTTGCTATATCTATC+AGG + chr3_1:4062392-4062411 Msa0345050:intron 40.0%
! TATTAGAGCATCTAGCTACC+AGG - chr3_1:4062442-4062461 None:intergenic 40.0%
ACAGTTTGATATCCTATGGG+AGG + chr3_1:4062605-4062624 Msa0345050:intron 40.0%
TACAGAAACATCATTGGCAG+AGG + chr3_1:4062787-4062806 Msa0345050:CDS 40.0%
GTAACTTCCAGCTCTTACTT+TGG - chr3_1:4062831-4062850 None:intergenic 40.0%
CTGGTATGGATCCAATAACA+AGG + chr3_1:4063023-4063042 Msa0345050:CDS 40.0%
GTATGGATCCAATAACAAGG+AGG + chr3_1:4063026-4063045 Msa0345050:CDS 40.0%
! AATAACAAGGAGGCATGTGT+GGG + chr3_1:4063036-4063055 Msa0345050:CDS 40.0%
GACATTCTAAGTGACCGTAT+AGG + chr3_1:4063124-4063143 Msa0345050:CDS 40.0%
AAGTGACCGTATAGGAATCA+TGG + chr3_1:4063132-4063151 Msa0345050:CDS 40.0%
CCTTTGCCATGATTCCTATA+CGG - chr3_1:4063141-4063160 None:intergenic 40.0%
CGTATAGGAATCATGGCAAA+GGG + chr3_1:4063139-4063158 Msa0345050:CDS 40.0%
!! TTGAAGTCACGTTTTGGTAC+TGG + chr3_1:4063193-4063212 Msa0345050:CDS 40.0%
AATGATCACAGTCCTGCAAA+TGG + chr3_1:4063247-4063266 Msa0345050:CDS 40.0%
TGTGATTCCTCATGAAAGAG+AGG + chr3_1:4063447-4063466 Msa0345050:CDS 40.0%
!! GGAGCTCTGAAAAGAAATTC+TGG - chr3_1:4063963-4063982 None:intergenic 40.0%
TGTCAAGGTCAAAGTCACTA+GGG - chr3_1:4064103-4064122 None:intergenic 40.0%
ATGTCAAGGTCAAAGTCACT+AGG - chr3_1:4064104-4064123 None:intergenic 40.0%
AAAATGCGGTTATACGTACC+TGG - chr3_1:4064140-4064159 None:intergenic 40.0%
TCTCTTGCAAAAAGTGAGCA+CGG + chr3_1:4064219-4064238 Msa0345050:intron 40.0%
!! CTCGAAAGTGCTTATGTAAG+TGG - chr3_1:4064292-4064311 None:intergenic 40.0%
ACAGGACCATAAACTAGTAC+TGG + chr3_1:4064491-4064510 Msa0345050:intron 40.0%
TATTCAGTAGACTCTGATCC+TGG - chr3_1:4064672-4064691 None:intergenic 40.0%
! TGAATACCCCACAGGTTTTA+TGG + chr3_1:4064686-4064705 Msa0345050:CDS 40.0%
CTTCTACCATAAAACCTGTG+GGG - chr3_1:4064695-4064714 None:intergenic 40.0%
TCGAGATGGAAGAATTTGGA+GGG + chr3_1:4065028-4065047 Msa0345050:three_prime_UTR 40.0%
! CTCTGTTTTGTGTGACAGAG+AGG - chr3_1:4057341-4057360 None:intergenic 45.0%
GATGGAGATGGAATCATTGG+TGG - chr3_1:4057587-4057606 None:intergenic 45.0%
ATAGCACCAGGACATTGCAT+AGG - chr3_1:4057803-4057822 None:intergenic 45.0%
TGTGATACCGAACACGCAAT+TGG + chr3_1:4058318-4058337 Msa0345050:intron 45.0%
TGAGTTTGTCAGAATCACGG+TGG + chr3_1:4058448-4058467 Msa0345050:intron 45.0%
GAGTTTGTCAGAATCACGGT+GGG + chr3_1:4058449-4058468 Msa0345050:intron 45.0%
! CGCAGCGTCATCAAAGATTT+TGG - chr3_1:4058930-4058949 None:intergenic 45.0%
TAGAGAAAGGAGCCATTCCT+GGG - chr3_1:4059523-4059542 None:intergenic 45.0%
ATGGCTCCTTTCTCTACAGT+TGG + chr3_1:4059527-4059546 Msa0345050:CDS 45.0%
GAAAGAGCTTAAACTTCGCC+AGG + chr3_1:4059625-4059644 Msa0345050:CDS 45.0%
AGCTTAAACTTCGCCAGGTA+TGG + chr3_1:4059630-4059649 Msa0345050:intron 45.0%
TTTGCATTCTCAACACAGGC+AGG - chr3_1:4059687-4059706 None:intergenic 45.0%
ACTGGTTATCATGGCTAACC+TGG + chr3_1:4060140-4060159 Msa0345050:CDS 45.0%
CTGGTTATCATGGCTAACCT+GGG + chr3_1:4060141-4060160 Msa0345050:CDS 45.0%
GAGTGTAACAACTGTTTCCC+AGG - chr3_1:4060161-4060180 None:intergenic 45.0%
TCATCTTCGGCAACAACAGT+CGG + chr3_1:4060446-4060465 Msa0345050:CDS 45.0%
!! TATTGTCGGCTTCATGACTC+AGG + chr3_1:4060481-4060500 Msa0345050:CDS 45.0%
! TTGCAGATGGTGTCAACAGT+AGG + chr3_1:4060601-4060620 Msa0345050:intron 45.0%
! GGCGGTGTAAAAATTTTCCC+TGG + chr3_1:4060622-4060641 Msa0345050:CDS 45.0%
CCTTGAGCAAAAGGATTAGG+CGG - chr3_1:4060676-4060695 None:intergenic 45.0%
AGGCCTTGAGCAAAAGGATT+AGG - chr3_1:4060679-4060698 None:intergenic 45.0%
CACACAGTCATCGTCGTTAA+CGG - chr3_1:4060773-4060792 None:intergenic 45.0%
TGAAATGCTGAATGGAAGGG+AGG - chr3_1:4060932-4060951 None:intergenic 45.0%
TTCTGGCCACATTCTTTCTG+TGG + chr3_1:4061024-4061043 Msa0345050:CDS 45.0%
TCCCAAATGAAATGGGTGTG+AGG + chr3_1:4061078-4061097 Msa0345050:CDS 45.0%
GACGGAGGACAAAAAGTGAA+AGG + chr3_1:4061143-4061162 Msa0345050:CDS 45.0%
CGCATTTCTTTCATAGAGGG+TGG + chr3_1:4061247-4061266 Msa0345050:intron 45.0%
TGGACTAAACTCTTCATGCC+GGG - chr3_1:4061296-4061315 None:intergenic 45.0%
! GTGGACTAAACTCTTCATGC+CGG - chr3_1:4061297-4061316 None:intergenic 45.0%
TCAAGGACGTCTTCATCATC+TGG - chr3_1:4061319-4061338 None:intergenic 45.0%
GTGAAGCAGCAACAAACACA+AGG + chr3_1:4061352-4061371 Msa0345050:CDS 45.0%
! TGACGCAAATGTTGCTGTTC+AGG + chr3_1:4061381-4061400 Msa0345050:CDS 45.0%
TGTTGTCGAGAGCCAACTAA+TGG - chr3_1:4061730-4061749 None:intergenic 45.0%
CTTGATCATCAGCCATGCAT+AGG - chr3_1:4061941-4061960 None:intergenic 45.0%
CTATGCATGGCTGATGATCA+AGG + chr3_1:4061939-4061958 Msa0345050:intron 45.0%
TCTATTAGGACCCAATGGAG+CGG + chr3_1:4062023-4062042 Msa0345050:CDS 45.0%
! GTAGTTTTTCCCGCTCCATT+GGG - chr3_1:4062036-4062055 None:intergenic 45.0%
! TGTAGTTTTTCCCGCTCCAT+TGG - chr3_1:4062037-4062056 None:intergenic 45.0%
GGGATAACTCCAGTAACTGA+TGG + chr3_1:4062075-4062094 Msa0345050:CDS 45.0%
ACTCCAGTAACTGATGGAGA+TGG + chr3_1:4062081-4062100 Msa0345050:CDS 45.0%
TCACCATCTCCATCAGTTAC+TGG - chr3_1:4062087-4062106 None:intergenic 45.0%
TGAGAGATGGAAAGACACCT+GGG - chr3_1:4062319-4062338 None:intergenic 45.0%
ATGAGAGATGGAAAGACACC+TGG - chr3_1:4062320-4062339 None:intergenic 45.0%
CAAACTAGCGGAACAAGTTC+AGG - chr3_1:4062716-4062735 None:intergenic 45.0%
GTAAGAGCTGGAAGTTACAG+TGG + chr3_1:4062833-4062852 Msa0345050:CDS 45.0%
GATGAACCGGTATGCAAAAG+AGG + chr3_1:4062920-4062939 Msa0345050:intron 45.0%
! CACACATGCCTCCTTGTTAT+TGG - chr3_1:4063037-4063056 None:intergenic 45.0%
! CAATAACAAGGAGGCATGTG+TGG + chr3_1:4063035-4063054 Msa0345050:CDS 45.0%
CCGTATAGGAATCATGGCAA+AGG + chr3_1:4063138-4063157 Msa0345050:CDS 45.0%
ACGTGACTTCAATCTGATCG+AGG - chr3_1:4063185-4063204 None:intergenic 45.0%
CAAGAGTTGTTAGACCAAGC+TGG - chr3_1:4064020-4064039 None:intergenic 45.0%
!! TAGAAAGTGCTGCAGCTGAA+GGG + chr3_1:4064076-4064095 Msa0345050:CDS 45.0%
GTGACTTTGACCTTGACATC+TGG + chr3_1:4064105-4064124 Msa0345050:CDS 45.0%
TTGCAAAAAGTGAGCACGGA+TGG + chr3_1:4064223-4064242 Msa0345050:intron 45.0%
! TAGAGAGGCATGCCCTAAAA+TGG - chr3_1:4064532-4064551 None:intergenic 45.0%
TCCTGTAGGAGCTATGTATG+TGG + chr3_1:4064641-4064660 Msa0345050:CDS 45.0%
CCTGTAGGAGCTATGTATGT+GGG + chr3_1:4064642-4064661 Msa0345050:CDS 45.0%
GCTATGTATGTGGGATTTCC+AGG + chr3_1:4064651-4064670 Msa0345050:CDS 45.0%
TACTGGGAACAAGATGACAC+CGG + chr3_1:4064717-4064736 Msa0345050:CDS 45.0%
! GAATATGAGCTTTCTGGGAG+TGG - chr3_1:4064761-4064780 None:intergenic 45.0%
TTGCAGTAGCAGATGGTAGT+TGG - chr3_1:4064794-4064813 None:intergenic 45.0%
!!! AGTGATTTTGGGACACACTC+AGG + chr3_1:4064897-4064916 Msa0345050:three_prime_UTR 45.0%
TGGAATCGGATATGTCGAGA+TGG + chr3_1:4065014-4065033 Msa0345050:three_prime_UTR 45.0%
GTCGAGATGGAAGAATTTGG+AGG + chr3_1:4065027-4065046 Msa0345050:three_prime_UTR 45.0%
CGAGATGGAAGAATTTGGAG+GGG + chr3_1:4065029-4065048 Msa0345050:three_prime_UTR 45.0%
ATGGAAGAATTTGGAGGGGA+AGG + chr3_1:4065033-4065052 Msa0345050:three_prime_UTR 45.0%
TGGAAGAATTTGGAGGGGAA+GGG + chr3_1:4065034-4065053 Msa0345050:three_prime_UTR 45.0%
!!! TTTATTTAAAATCAAAATAT+GGG + chr3_1:4058663-4058682 Msa0345050:intron 5.0%
AGAGAGAGAAGAGGTGAGGA+AGG - chr3_1:4057317-4057336 None:intergenic 50.0%
GTAGAGAAAGGAGCCATTCC+TGG - chr3_1:4059524-4059543 None:intergenic 50.0%
GGATAGGCAATGACCGTGAT+GGG + chr3_1:4060100-4060119 Msa0345050:intron 50.0%
GATAGGCAATGACCGTGATG+GGG + chr3_1:4060101-4060120 Msa0345050:intron 50.0%
AGAGTCGTAAAGCCCCATCA+CGG - chr3_1:4060116-4060135 None:intergenic 50.0%
GGCTTTACGACTCTGCATAC+TGG + chr3_1:4060122-4060141 Msa0345050:CDS 50.0%
! CAGATGGTGTCAACAGTAGG+CGG + chr3_1:4060604-4060623 Msa0345050:intron 50.0%
! CCGCCTAATCCTTTTGCTCA+AGG + chr3_1:4060673-4060692 Msa0345050:CDS 50.0%
ACACTCAGGCCTTGAGCAAA+AGG - chr3_1:4060685-4060704 None:intergenic 50.0%
CAGCTAACCCCGTTATCTTC+AGG - chr3_1:4060730-4060749 None:intergenic 50.0%
!! CTGAAGATAACGGGGTTAGC+TGG + chr3_1:4060728-4060747 Msa0345050:CDS 50.0%
! CGATGACTGTGTGCTGACAA+TGG + chr3_1:4060780-4060799 Msa0345050:CDS 50.0%
CCTCGTTATTGGACAGGAGA+CGG + chr3_1:4061125-4061144 Msa0345050:CDS 50.0%
AGGACGTCTTCATCATCTGG+TGG - chr3_1:4061316-4061335 None:intergenic 50.0%
GGCATTGTGAAGACTTACCC+CGG + chr3_1:4061409-4061428 Msa0345050:CDS 50.0%
TGCTCCTTACCACGCTGTTA+AGG + chr3_1:4061471-4061490 Msa0345050:CDS 50.0%
!! GAGCCTTTGGGGTTAAACTG+TGG - chr3_1:4061689-4061708 None:intergenic 50.0%
CTATTAGGACCCAATGGAGC+GGG + chr3_1:4062024-4062043 Msa0345050:CDS 50.0%
AATTCGGTCCGAAGCTCTAC+CGG + chr3_1:4062258-4062277 Msa0345050:CDS 50.0%
TTGACATGCCGGTAGAGCTT+CGG - chr3_1:4062269-4062288 None:intergenic 50.0%
GAGAGATGGAAAGACACCTG+GGG - chr3_1:4062318-4062337 None:intergenic 50.0%
AGCATCTAGCTACCAGGTCA+GGG - chr3_1:4062436-4062455 None:intergenic 50.0%
! ATCCTATGGGAGGCTTTGTC+TGG + chr3_1:4062615-4062634 Msa0345050:CDS 50.0%
ATTGGCAGAGGTGAGACTCA+CGG + chr3_1:4062799-4062818 Msa0345050:CDS 50.0%
GATGCAGCCAAAGTAAGAGC+TGG + chr3_1:4062821-4062840 Msa0345050:CDS 50.0%
AGAGCTGGAAGTTACAGTGG+AGG + chr3_1:4062836-4062855 Msa0345050:CDS 50.0%
GATGCTGTGTCACCATTTGC+AGG - chr3_1:4063262-4063281 None:intergenic 50.0%
AGCATCAGCAAGACATCGTG+AGG + chr3_1:4063276-4063295 Msa0345050:CDS 50.0%
!! AGGAGTGCCTCTCTTTCATG+AGG - chr3_1:4063457-4063476 None:intergenic 50.0%
GGCATATCTGACATCCAGCT+TGG + chr3_1:4064003-4064022 Msa0345050:CDS 50.0%
!! CTAGAAAGTGCTGCAGCTGA+AGG + chr3_1:4064075-4064094 Msa0345050:CDS 50.0%
GACAGACTCTCCAGATGTCA+AGG - chr3_1:4064118-4064137 None:intergenic 50.0%
CCCACATACATAGCTCCTAC+AGG - chr3_1:4064645-4064664 None:intergenic 50.0%
GAGTCTACTGAATACCCCAC+AGG + chr3_1:4064678-4064697 Msa0345050:CDS 50.0%
ACCGGTACCCTTTGTATTGC+CGG + chr3_1:4064735-4064754 Msa0345050:CDS 50.0%
CGTTGTCTTGCAGTAGCAGA+TGG - chr3_1:4064801-4064820 None:intergenic 50.0%
AAGAATTTGGAGGGGAAGGG+AGG + chr3_1:4065037-4065056 Msa0345050:three_prime_UTR 50.0%
AGGGAGAGAGAGAAGAGGTG+AGG - chr3_1:4057321-4057340 None:intergenic 55.0%
CAGAGAGGGAGAGAGAGAAG+AGG - chr3_1:4057326-4057345 None:intergenic 55.0%
!! GTTGCCTCTTCAGCTTGCTG+CGG + chr3_1:4057928-4057947 Msa0345050:CDS 55.0%
TGACGCTGCGGCTTAGATTG+TGG + chr3_1:4058940-4058959 Msa0345050:intron 55.0%
CATTGACAGCGATGCAGCTG+TGG - chr3_1:4059323-4059342 None:intergenic 55.0%
CACAGCTGCATCGCTGTCAA+TGG + chr3_1:4059321-4059340 Msa0345050:intron 55.0%
TTCAAGGAATTCCCGCACCC+AGG + chr3_1:4059503-4059522 Msa0345050:CDS 55.0%
AAAGGAGCCATTCCTGGGTG+CGG - chr3_1:4059518-4059537 None:intergenic 55.0%
GGGATAGGCAATGACCGTGA+TGG + chr3_1:4060099-4060118 Msa0345050:intron 55.0%
AGGCCTGAGTGTGCTTGCAA+AGG + chr3_1:4060693-4060712 Msa0345050:CDS 55.0%
CAGCCTTTGCAAGCACACTC+AGG - chr3_1:4060699-4060718 None:intergenic 55.0%
!! GGGGTTAGCTGGAATACACG+AGG + chr3_1:4060739-4060758 Msa0345050:CDS 55.0%
CCGTCTCCTGTCCAATAACG+AGG - chr3_1:4061128-4061147 None:intergenic 55.0%
CGTTATTGGACAGGAGACGG+AGG + chr3_1:4061128-4061147 Msa0345050:CDS 55.0%
TCAGTGATTCCTCCCTGACC+TGG + chr3_1:4062421-4062440 Msa0345050:intron 55.0%
ATCTAGCTACCAGGTCAGGG+AGG - chr3_1:4062433-4062452 None:intergenic 55.0%
GAGCATCTAGCTACCAGGTC+AGG - chr3_1:4062437-4062456 None:intergenic 55.0%
GACCAGACAAAGCCTCCCAT+AGG - chr3_1:4062620-4062639 None:intergenic 55.0%
TAGCGGAACAAGTTCAGGCC+TGG - chr3_1:4062711-4062730 None:intergenic 55.0%
AAGGGAAAGCTGCGCTGCAT+TGG + chr3_1:4063157-4063176 Msa0345050:CDS 55.0%
GACATCTGGAGAGTCTGTCC+AGG + chr3_1:4064119-4064138 Msa0345050:CDS 55.0%
! GCCGGCAATACAAAGGGTAC+CGG - chr3_1:4064739-4064758 None:intergenic 55.0%
GGAGTGGCCGGCAATACAAA+GGG - chr3_1:4064745-4064764 None:intergenic 55.0%
! ATGAGCTTTCTGGGAGTGGC+CGG - chr3_1:4064757-4064776 None:intergenic 55.0%
CTGCTACTGCAAGACAACGC+CGG + chr3_1:4064802-4064821 Msa0345050:CDS 55.0%
CTCCATGAACTGACCCTGAC+CGG - chr3_1:4064824-4064843 None:intergenic 55.0%
CTGCGGAGCGTGAAATCGCT+AGG + chr3_1:4057945-4057964 Msa0345050:CDS 60.0%
GGAATTCCCGCACCCAGGAA+TGG + chr3_1:4059508-4059527 Msa0345050:CDS 60.0%
AAGGAGCCATTCCTGGGTGC+GGG - chr3_1:4059517-4059536 None:intergenic 60.0%
GGGAGTGGCCGGCAATACAA+AGG - chr3_1:4064746-4064765 None:intergenic 60.0%
ACTGCAAGACAACGCCGGTC+AGG + chr3_1:4064807-4064826 Msa0345050:CDS 60.0%
CTGCAAGACAACGCCGGTCA+GGG + chr3_1:4064808-4064827 Msa0345050:CDS 60.0%
CGCTCCGCAGCAAGCTGAAG+AGG - chr3_1:4057935-4057954 None:intergenic 65.0%
CGCCGGTCAGGGTCAGTTCA+TGG + chr3_1:4064819-4064838 Msa0345050:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 4057303 4065173 4057303 ID=Msa0345050;Name=Msa0345050
chr3_1 mRNA 4057303 4065173 4057303 ID=Msa0345050-mRNA-1;Parent=Msa0345050;Name=Msa0345050-mRNA-1;_AED=0.08;_eAED=0.08;_QI=83|1|1|1|1|1|15|286|956
chr3_1 exon 4057303 4057980 4057303 ID=Msa0345050-mRNA-1:exon:1286;Parent=Msa0345050-mRNA-1
chr3_1 exon 4059477 4059646 4059477 ID=Msa0345050-mRNA-1:exon:1287;Parent=Msa0345050-mRNA-1
chr3_1 exon 4060106 4060291 4060106 ID=Msa0345050-mRNA-1:exon:1288;Parent=Msa0345050-mRNA-1
chr3_1 exon 4060407 4060502 4060407 ID=Msa0345050-mRNA-1:exon:1289;Parent=Msa0345050-mRNA-1
chr3_1 exon 4060607 4060801 4060607 ID=Msa0345050-mRNA-1:exon:1290;Parent=Msa0345050-mRNA-1
chr3_1 exon 4061005 4061164 4061005 ID=Msa0345050-mRNA-1:exon:1291;Parent=Msa0345050-mRNA-1
chr3_1 exon 4061263 4061492 4061263 ID=Msa0345050-mRNA-1:exon:1292;Parent=Msa0345050-mRNA-1
chr3_1 exon 4061985 4062102 4061985 ID=Msa0345050-mRNA-1:exon:1293;Parent=Msa0345050-mRNA-1
chr3_1 exon 4062244 4062320 4062244 ID=Msa0345050-mRNA-1:exon:1294;Parent=Msa0345050-mRNA-1
chr3_1 exon 4062609 4062698 4062609 ID=Msa0345050-mRNA-1:exon:1295;Parent=Msa0345050-mRNA-1
chr3_1 exon 4062785 4062928 4062785 ID=Msa0345050-mRNA-1:exon:1296;Parent=Msa0345050-mRNA-1
chr3_1 exon 4063019 4063321 4063019 ID=Msa0345050-mRNA-1:exon:1297;Parent=Msa0345050-mRNA-1
chr3_1 exon 4063400 4063480 4063400 ID=Msa0345050-mRNA-1:exon:1298;Parent=Msa0345050-mRNA-1
chr3_1 exon 4063964 4064140 4063964 ID=Msa0345050-mRNA-1:exon:1299;Parent=Msa0345050-mRNA-1
chr3_1 exon 4064639 4065173 4064639 ID=Msa0345050-mRNA-1:exon:1300;Parent=Msa0345050-mRNA-1
chr3_1 five_prime_UTR 4057303 4057385 4057303 ID=Msa0345050-mRNA-1:five_prime_utr;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4057386 4057980 4057386 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4059477 4059646 4059477 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4060106 4060291 4060106 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4060407 4060502 4060407 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4060607 4060801 4060607 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4061005 4061164 4061005 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4061263 4061492 4061263 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4061985 4062102 4061985 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4062244 4062320 4062244 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4062609 4062698 4062609 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4062785 4062928 4062785 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4063019 4063321 4063019 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4063400 4063480 4063400 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4063964 4064140 4063964 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 CDS 4064639 4064887 4064639 ID=Msa0345050-mRNA-1:cds;Parent=Msa0345050-mRNA-1
chr3_1 three_prime_UTR 4064888 4065173 4064888 ID=Msa0345050-mRNA-1:three_prime_utr;Parent=Msa0345050-mRNA-1
Gene Sequence

>Msa0345050

ATGACAAACGCTTTTACGTTGGTAACACAACAATACCAAGCGTTGCTTAAAAAAAACATATTACTCTCATGGCGCAGCAAAAGATCAATTCTTCTTCAACTCCTCTCACCAATCTTCTTCATTTTCCTAATCTTCGCCATAGACAAAGCAATAAAAGCACAATCATCAACAACTTCTGCATTCAAAGAAATCAGAAACCCACCAATGATTCCATCTCCATCAATCAAACCTTGTGAGGAGAAATTCTTCATGAAAATGCCGTGTTATGATTTCATTTGGAGCGGTGATGATGATCCGAAGTTTCGTACAATTGTTGAGAGGATAATTAAGAATAATCCTGGTAGAGAAATACCTGTTGAAAAGGTGAAGAGTTTTCGTGATAAGAATGAAGTTGATGATTGGTTGTTTAAGAATCCTATGCAATGTCCTGGTGCTATTCATTTTAGTGAAAAGAATGGAAGTATTATTAGTTATGGGATTCAGACAAATTCTACTAGTGTTCAGAAACGTGGCAAGTATGAAGATCCTACTTTTGATTTTCAGTTGCCTCTTCAGCTTGCTGCGGAGCGTGAAATCGCTAGGTTTCTTATTGGAGACCCAGACTTCAAGTGGAATGTGTTTTTCAAGGAATTCCCGCACCCAGGAATGGCTCCTTTCTCTACAGTTGGATCAATGGGTCCAACATTTTTTCTTGCAACTGCTATGTTTAATTTCGTTCTTCAGATAAGTTCATTGGTGACAGAGAAAGAGCTTAAACTTCGCCAGGCAATGACCGTGATGGGGCTTTACGACTCTGCATACTGGTTATCATGGCTAACCTGGGAAACAGTTGTTACACTCATATCATCTCTTCTCTTAGTTCTCACTGGCATGATGTTTCAGTTTGATTTCTTCTTGAAAAACAATTTCGCTGTTCTGTTCTTTTTGTTCTTCCTATTTGAACTCAACATGACTGGGTTTGCCTTCTTGTTATCAGCTTTCATTCGTAAATCATCTTCGGCAACAACAGTCGGCTTCTCCGTATTTATTGTCGGCTTCATGACTCAGATGGTGTCAACAGTAGGCGGTGTAAAAATTTTCCCTGGTCATTACCGAGATTTATGGTTATTGTTTCCGCCTAATCCTTTTGCTCAAGGCCTGAGTGTGCTTGCAAAGGCTGTTTCAACTCCTGAAGATAACGGGGTTAGCTGGAATACACGAGGAAAATGTGCCGTTAACGACGATGACTGTGTGCTGACAATGAATGATATTTATATACGGCTTCTGGCCACATTCTTTCTGTGGTTCGTTCTTGCCATCTACTTTGACAATATAATCCCAAATGAAATGGGTGTGAGGAAATCTGTGTTGTACTTTCTAAATCCTCGTTATTGGACAGGAGACGGAGGACAAAAAGTGAAAGAGGGTGGGATTTGTAGTTGCATATCTTCAACCCGGCATGAAGAGTTTAGTCCACCAGATGATGAAGACGTCCTTGAAGAAGAAAATGTTGTGAAGCAGCAACAAACACAAGGTATTGTTGACGCAAATGTTGCTGTTCAGGTACAAGGCATTGTGAAGACTTACCCCGGTATATTTAAATTTGGTTGCTGCTGTAACTGTAAAAGAACTGCTCCTTACCACGCTGTTAAGGGCTTGTGGGTGAACTTTACAAAGAATCAGTTATTTTGTCTATTAGGACCCAATGGAGCGGGAAAAACTACAGCTATTAGTTGTTTGACAGGGATAACTCCAGTAACTGATGGAGATGCATTGATTTATGGGAATTCGGTCCGAAGCTCTACCGGCATGTCAAACATTCGAAAGATTATTGGAGTGTGTCCCCAGTTTGATATCCTATGGGAGGCTTTGTCTGGTCAAGAACACCTCGAACTCTTCTCTAGAATTAAAGGGCTGTCCCCAGATTCTATAAAATCAATTACAGAAACATCATTGGCAGAGGTGAGACTCACGGATGCAGCCAAAGTAAGAGCTGGAAGTTACAGTGGAGGAATGAAACGTCGTCTCAGTGTTGCAATTGCACTTATCGGTGACCCCAAATTAGTCATTTTGGATGAACCGACTACTGGTATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATTGAAAATGCAAAAAAAGGGCGTGCCATTATTCTCACAACACATTCTATGGAAGAAGCTGACATTCTAAGTGACCGTATAGGAATCATGGCAAAGGGAAAGCTGCGCTGCATTGGAACCTCGATCAGATTGAAGTCACGTTTTGGTACTGGCTTTATTACAAATATTAGCTTCGCAAACAACAATGATCACAGTCCTGCAAATGGTGACACAGCATCAGCAAGACATCGTGAGGCTGTGAAGCAATTCTTTAAGAATCATTTAGATGTAGTACCAAAAGAGGAGAACAATAACTTCCTAACTTATGTGATTCCTCATGAAAGAGAGGCACTCCTTACAAATTTCTTTTCAGAGCTCCAAGATAGAAAAGAAGAATTTGGCATATCTGACATCCAGCTTGGTCTAACAACTCTTGAAGAAGTTTTCTTGAATATTGCAAAGCAGGCAGAGCTAGAAAGTGCTGCAGCTGAAGGGACCCTAGTGACTTTGACCTTGACATCTGGAGAGTCTGTCCAGATTCCTGTAGGAGCTATGTATGTGGGATTTCCAGGATCAGAGTCTACTGAATACCCCACAGGTTTTATGGTAGAAGTATACTGGGAACAAGATGACACCGGTACCCTTTGTATTGCCGGCCACTCCCAGAAAGCTCATATTCCTCAAAATATCCAACTACCATCTGCTACTGCAAGACAACGCCGGTCAGGGTCAGTTCATGGAGTTGTGATTGATCCAAATCAAGTTAGTTCAGACGTTTTTCGGTGA
Protein sequence

>Msa0345050

MTNAFTLVTQQYQALLKKNILLSWRSKRSILLQLLSPIFFIFLIFAIDKAIKAQSSTTSAFKEIRNPPMIPSPSIKPCEEKFFMKMPCYDFIWSGDDDPKFRTIVERIIKNNPGREIPVEKVKSFRDKNEVDDWLFKNPMQCPGAIHFSEKNGSIISYGIQTNSTSVQKRGKYEDPTFDFQLPLQLAAEREIARFLIGDPDFKWNVFFKEFPHPGMAPFSTVGSMGPTFFLATAMFNFVLQISSLVTEKELKLRQAMTVMGLYDSAYWLSWLTWETVVTLISSLLLVLTGMMFQFDFFLKNNFAVLFFLFFLFELNMTGFAFLLSAFIRKSSSATTVGFSVFIVGFMTQMVSTVGGVKIFPGHYRDLWLLFPPNPFAQGLSVLAKAVSTPEDNGVSWNTRGKCAVNDDDCVLTMNDIYIRLLATFFLWFVLAIYFDNIIPNEMGVRKSVLYFLNPRYWTGDGGQKVKEGGICSCISSTRHEEFSPPDDEDVLEEENVVKQQQTQGIVDANVAVQVQGIVKTYPGIFKFGCCCNCKRTAPYHAVKGLWVNFTKNQLFCLLGPNGAGKTTAISCLTGITPVTDGDALIYGNSVRSSTGMSNIRKIIGVCPQFDILWEALSGQEHLELFSRIKGLSPDSIKSITETSLAEVRLTDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKKGRAIILTTHSMEEADILSDRIGIMAKGKLRCIGTSIRLKSRFGTGFITNISFANNNDHSPANGDTASARHREAVKQFFKNHLDVVPKEENNNFLTYVIPHEREALLTNFFSELQDRKEEFGISDIQLGLTTLEEVFLNIAKQAELESAAAEGTLVTLTLTSGESVQIPVGAMYVGFPGSESTEYPTGFMVEVYWEQDDTGTLCIAGHSQKAHIPQNIQLPSATARQRRSGSVHGVVIDPNQVSSDVFR*