AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0931410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0931410 MtrunA17_Chr3g0124821 97.158 387 10 1 1 386 1 387 0.0 774
Msa0931410 MtrunA17_Chr4g0037131 49.219 256 105 5 99 354 14 244 1.58e-76 240
Msa0931410 MtrunA17_Chr5g0405731 48.473 262 108 6 99 360 13 247 2.25e-75 236
Msa0931410 MtrunA17_Chr4g0030171 45.703 256 113 6 100 354 16 246 4.16e-67 214
Msa0931410 MtrunA17_Chr3g0137751 32.692 312 148 13 55 357 59 317 1.08e-32 125
Msa0931410 MtrunA17_Chr2g0292151 26.996 263 154 7 120 355 63 314 4.26e-17 82.4
Msa0931410 MtrunA17_Chr7g0244461 27.381 252 154 7 120 353 54 294 1.02e-15 77.8
Msa0931410 MtrunA17_Chr4g0013171 29.231 260 141 11 120 353 61 303 7.21e-15 75.1
Msa0931410 MtrunA17_Chr1g0188431 30.000 260 139 12 120 356 73 312 9.61e-15 75.1
Msa0931410 MtrunA17_Chr4g0013721 30.275 218 121 8 179 376 193 399 1.49e-14 75.1
Msa0931410 MtrunA17_Chr3g0124831 100.000 44 0 0 392 435 1 44 2.17e-14 67.0
Msa0931410 MtrunA17_Chr2g0320031 25.632 277 172 8 105 362 45 306 4.14e-14 73.2
Msa0931410 MtrunA17_Chr2g0291751 26.132 287 173 10 97 355 39 314 1.59e-13 71.6
Msa0931410 MtrunA17_Chr5g0438021 25.856 263 146 8 120 353 65 307 4.52e-13 70.1
Msa0931410 MtrunA17_Chr7g0254201 26.335 281 167 9 101 355 30 296 5.38e-13 69.7
Msa0931410 MtrunA17_Chr2g0292181 29.648 199 112 7 179 355 131 323 1.57e-12 68.6
Msa0931410 MtrunA17_Chr2g0292111 26.437 261 154 9 120 353 63 312 1.82e-12 68.6
Msa0931410 MtrunA17_Chr2g0292251 25.954 262 156 8 120 354 62 312 1.96e-12 68.2
Msa0931410 MtrunA17_Chr7g0258811 27.723 202 112 7 177 353 161 353 3.18e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0931410 AT1G77490.1 71.122 419 114 4 19 434 2 416 0.0 597
Msa0931410 AT1G77490.2 71.122 419 114 4 19 434 2 416 0.0 597
Msa0931410 AT4G08390.3 84.420 276 43 0 90 365 96 371 0.0 511
Msa0931410 AT4G08390.2 84.420 276 43 0 90 365 97 372 0.0 511
Msa0931410 AT4G08390.5 84.420 276 43 0 90 365 97 372 0.0 511
Msa0931410 AT4G08390.1 84.420 276 43 0 90 365 97 372 0.0 511
Msa0931410 AT4G08390.4 76.812 276 38 1 90 365 97 346 6.78e-159 452
Msa0931410 AT4G35000.1 50.192 261 103 6 99 359 13 246 6.39e-77 241
Msa0931410 AT3G09640.2 48.235 255 107 5 100 354 17 246 5.67e-70 222
Msa0931410 AT3G09640.1 48.235 255 107 5 100 354 17 246 5.67e-70 222
Msa0931410 AT1G07890.2 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0931410 AT1G07890.8 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0931410 AT1G07890.4 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0931410 AT1G07890.7 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0931410 AT1G07890.1 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0931410 AT1G07890.3 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0931410 AT1G07890.5 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0931410 AT1G07890.6 47.266 256 109 5 100 354 16 246 6.97e-70 222
Msa0931410 AT4G35970.1 43.774 265 121 6 99 363 12 248 5.40e-63 205
Msa0931410 AT4G35970.2 42.979 235 108 5 99 333 12 220 4.58e-54 180
Msa0931410 AT4G32320.1 33.230 322 154 13 54 357 48 326 4.06e-35 133
Msa0931410 AT4G33420.1 33.659 205 107 8 170 357 119 311 6.47e-17 82.0
Msa0931410 AT4G33420.2 33.659 205 107 8 170 357 166 358 6.91e-17 82.4
Msa0931410 AT2G18140.1 27.698 278 142 11 120 362 69 322 3.64e-16 79.7
Msa0931410 AT5G66390.1 29.139 302 146 13 103 358 45 324 3.85e-16 79.7
Msa0931410 AT2G22420.1 27.338 278 159 9 104 353 41 303 5.26e-16 79.3
Msa0931410 AT2G18150.1 27.820 266 143 11 120 353 70 318 1.55e-15 77.8
Msa0931410 AT1G14550.1 28.464 267 149 11 120 362 60 308 1.98e-15 77.4
Msa0931410 AT3G28200.1 30.144 209 116 6 165 356 106 301 1.01e-14 75.1
Msa0931410 AT1G24110.1 29.500 200 111 5 179 356 116 307 1.61e-14 74.7
Msa0931410 AT1G49570.1 25.442 283 151 11 120 364 82 342 1.12e-13 72.4
Msa0931410 AT1G14540.1 27.895 190 116 5 179 353 114 297 9.33e-12 66.2

Find 163 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATAGATCAATTTCATTT+TGG 0.115182 6_2:+80849323 None:intergenic
ATATCTGTTTGGAAACTAAT+TGG 0.210656 6_2:-80849878 Msa0931410:exon
AACCTTTCCAGAGGAGTAAT+TGG 0.234989 6_2:+80850336 None:intergenic
CCAGGAAGTCTCCCTTCTTC+AGG 0.253068 6_2:+80853070 None:intergenic
TGCTCCAAGGTTGCTGAGTT+TGG 0.256056 6_2:+80850636 None:intergenic
CTCCTCAATATTCTTATTAT+AGG 0.258901 6_2:+80853491 None:intergenic
GTCAACTATATCTGCAAATT+AGG 0.266142 6_2:+80855834 None:intergenic
CCTTCTTCAGGGCATTGTTC+AGG 0.268066 6_2:+80853082 None:intergenic
CATAATTGTTATTGCTGCTT+TGG 0.283340 6_2:-80849911 Msa0931410:CDS
TTTGACTTTAGAGCCTTATC+TGG 0.287367 6_2:+80849949 None:intergenic
CAGGAAATTGTTGCATTATC+TGG 0.291185 6_2:-80852477 Msa0931410:CDS
CAATAACAATTATGATGTTT+AGG 0.296597 6_2:+80849920 None:intergenic
CCTGAAGAAGGGAGACTTCC+TGG 0.303606 6_2:-80853070 Msa0931410:intron
CATGCGTGCGGCGGCGGCGC+CGG 0.306467 6_2:+80855410 None:intergenic
TTCTCACATCTTTCTCAATC+AGG 0.306856 6_2:-80855265 Msa0931410:intron
AGTATAAATGTAGGGGTATA+TGG 0.307712 6_2:+80849599 None:intergenic
TTTCAGGGCATTGTGGTAGA+TGG 0.326025 6_2:-80850394 Msa0931410:intron
AACTTCTCTCCCACTACATT+TGG 0.336185 6_2:+80850367 None:intergenic
GCTGAAATCCAATGATATAA+AGG 0.340292 6_2:+80849539 None:intergenic
AATAAGATGGGTCAAGTATA+AGG 0.349609 6_2:-80855673 Msa0931410:five_prime_UTR
TAAAACTCAACGAAACAAAA+TGG 0.353130 6_2:-80855490 Msa0931410:exon
TACAACACGGAAAAGAATAA+TGG 0.354199 6_2:-80849364 Msa0931410:three_prime_UTR
AAAGATGGGCCAGGAGCACC+TGG 0.354863 6_2:-80851081 Msa0931410:CDS
AATATTTGTCTTTGATTGGC+TGG 0.361482 6_2:+80853300 None:intergenic
TAAGTTCTGTCATCCTCTTT+TGG 0.362946 6_2:-80855034 Msa0931410:intron
CTGGAGAGTTGGAACAATTA+CGG 0.365633 6_2:-80849671 Msa0931410:three_prime_UTR
CCTGAATATTTGTCTTTGAT+TGG 0.366131 6_2:+80853296 None:intergenic
GTCTACTCTTCCATATTTCA+TGG 0.367084 6_2:+80853114 None:intergenic
TGGAGAGTTGGAACAATTAC+GGG 0.367409 6_2:-80849670 Msa0931410:three_prime_UTR
CCAATCAAAGACAAATATTC+AGG 0.367571 6_2:-80853296 Msa0931410:CDS
CTAGACCAGACCGCAGTGGC+TGG 0.369322 6_2:-80852434 Msa0931410:CDS
ATTATCTGGTGCGCACACAC+TGG 0.384414 6_2:-80852463 Msa0931410:CDS
TTCTATGTGACAGATTCGTT+TGG 0.387767 6_2:-80853532 Msa0931410:intron
TTATCTGGTGCGCACACACT+GGG 0.393437 6_2:-80852462 Msa0931410:CDS
ATTTCAATAAAATTTGTGTT+TGG 0.396018 6_2:-80849265 Msa0931410:three_prime_UTR
GTTTGACAACTCTTACTTCA+AGG 0.396786 6_2:-80851028 Msa0931410:intron
GACGGTGGCTCTGGTGGCGG+AGG 0.401403 6_2:+80855383 None:intergenic
GTATAATTTCCTTAGTCCTC+TGG 0.405390 6_2:+80849621 None:intergenic
TCTATGTGACAGATTCGTTT+GGG 0.406923 6_2:-80853531 Msa0931410:intron
GGATTAATAAGAAAACTAAA+AGG 0.408999 6_2:+80849422 None:intergenic
TTGCCCCAGCCACTGCGGTC+TGG 0.411028 6_2:+80852429 None:intergenic
AGAGATGGAATCAGCTTTGT+GGG 0.424573 6_2:+80849516 None:intergenic
GTACTTGGGATTCAAGTGTT+TGG 0.431119 6_2:+80855714 None:intergenic
GGGAATCATGCGTGCGGCGG+CGG 0.431703 6_2:+80855404 None:intergenic
TTTCTCATTCTACAGAAAGA+TGG 0.432931 6_2:-80851096 Msa0931410:intron
CTTTAACCATTGTGCAGTCC+AGG 0.440549 6_2:+80851050 None:intergenic
TCTTTGAATCTTCAGGAAGC+TGG 0.446122 6_2:-80853151 Msa0931410:intron
CAGGAAGTCTCCCTTCTTCA+GGG 0.452380 6_2:+80853071 None:intergenic
GGGGTGAAAGTATAAATGTA+GGG 0.452749 6_2:+80849591 None:intergenic
CAAGCAATTGAGCGAGGAAA+CGG 0.455809 6_2:+80855305 None:intergenic
ACCACAATGGCTACAATCAC+CGG 0.459447 6_2:-80855429 Msa0931410:CDS
GTAGCAGCCAATTACTCCTC+TGG 0.460289 6_2:-80850343 Msa0931410:CDS
TAGACCAGACCGCAGTGGCT+GGG 0.460927 6_2:-80852433 Msa0931410:CDS
TATACCGTGTATTTAGTCTC+AGG 0.464888 6_2:+80852405 None:intergenic
ATTCGTAGATGCAAAATTGA+AGG 0.465625 6_2:+80849397 None:intergenic
CTGAAATCCAATGATATAAA+GGG 0.466579 6_2:+80849540 None:intergenic
ATTGAGCGAGGAAACGGAAC+TGG 0.467178 6_2:+80855311 None:intergenic
CAGGTTCAAACTTTGCTCCA+AGG 0.468266 6_2:+80850623 None:intergenic
CGCAAATGATCCGCAGGTGA+AGG 0.470664 6_2:+80852623 None:intergenic
AGTACATGAAAATGACTCTT+GGG 0.471543 6_2:-80855696 Msa0931410:five_prime_UTR
CATGCCAAACTCAGCAACCT+TGG 0.474570 6_2:-80850640 Msa0931410:CDS
GCACTGAAAATTACCAAAAG+AGG 0.475415 6_2:+80855021 None:intergenic
ATGCTATGAGGAAGAAGATA+CGG 0.479276 6_2:-80849999 Msa0931410:CDS
CAACGTGAACAGACCTCTGC+AGG 0.481098 6_2:+80850604 None:intergenic
AATGACTCTTGGGAATAAGA+TGG 0.484015 6_2:-80855686 Msa0931410:five_prime_UTR
GAAATTCACTACAAGTGAAT+CGG 0.484500 6_2:-80849842 Msa0931410:three_prime_UTR
TTGACTTTAGAGCCTTATCT+GGG 0.486207 6_2:+80849950 None:intergenic
GAGGAGAAGTTCGTGCTTCG+AGG 0.488828 6_2:-80855140 Msa0931410:CDS
AAGTACATGAAAATGACTCT+TGG 0.489140 6_2:-80855697 Msa0931410:five_prime_UTR
GAGAGATGGAATCAGCTTTG+TGG 0.491842 6_2:+80849515 None:intergenic
CCTTGTCATTCAACCCCATT+CGG 0.491886 6_2:+80852588 None:intergenic
TTCTCATTCTACAGAAAGAT+GGG 0.496196 6_2:-80851095 Msa0931410:intron
AGACCAGACCGCAGTGGCTG+GGG 0.496549 6_2:-80852432 Msa0931410:CDS
TTCAAATCTTAAGCTACCAT+TGG 0.498143 6_2:+80853449 None:intergenic
CGTGCTTCGAGGGGACGATT+CGG 0.498992 6_2:-80855129 Msa0931410:CDS
TGAGAAATATGCTGTAGATC+AGG 0.501966 6_2:-80850692 Msa0931410:CDS
GAAGATACGGGCTGAATATG+AGG 0.502305 6_2:-80849986 Msa0931410:CDS
CCTGAACAATGCCCTGAAGA+AGG 0.503982 6_2:-80853082 Msa0931410:CDS
AGGGGTGAAAGTATAAATGT+AGG 0.504623 6_2:+80849590 None:intergenic
GTGATAGAGCCAGAGGACTA+AGG 0.505410 6_2:-80849630 Msa0931410:three_prime_UTR
GCAAATGATCCGCAGGTGAA+GGG 0.506978 6_2:+80852624 None:intergenic
TGAGACGGTGGCTCTGGTGG+CGG 0.507725 6_2:+80855380 None:intergenic
GCTGAATATGAGGCGGTTGG+CGG 0.508251 6_2:-80849976 Msa0931410:CDS
ATACTCCACTACTGGAGAGT+TGG 0.509908 6_2:-80849682 Msa0931410:three_prime_UTR
AGGAGAAGTTCGTGCTTCGA+GGG 0.513885 6_2:-80855139 Msa0931410:CDS
AGATGGGCCAGGAGCACCTG+GGG 0.518802 6_2:-80851079 Msa0931410:CDS
AAGGAGAAGGAAGAGAGAGA+TGG 0.521545 6_2:+80849501 None:intergenic
TGAGAGTGAGACGGTGGCTC+TGG 0.525646 6_2:+80855374 None:intergenic
CGTTTGGGATGGCATGATGC+TGG 0.534032 6_2:-80853516 Msa0931410:CDS
AAGCGCTAGAGAAGATATCA+AGG 0.535333 6_2:-80855070 Msa0931410:CDS
GAAGTTTCAATGCATTTACA+AGG 0.538155 6_2:+80853324 None:intergenic
TCTACTCTTCCATATTTCAT+GGG 0.539117 6_2:+80853115 None:intergenic
TAATGAATACATACCAGCAT+TGG 0.539538 6_2:+80853407 None:intergenic
ATGACTCTTGGGAATAAGAT+GGG 0.540196 6_2:-80855685 Msa0931410:five_prime_UTR
ACGGTGGCTCTGGTGGCGGA+GGG 0.544294 6_2:+80855384 None:intergenic
CAAATGATCCGCAGGTGAAG+GGG 0.545564 6_2:+80852625 None:intergenic
GGTTGGCGGAAGCCCAGATA+AGG 0.547496 6_2:-80849962 Msa0931410:CDS
AATTGAAATGGTGAAGGAGA+AGG 0.549067 6_2:+80849488 None:intergenic
CCACAGAGAGGTGGAGCCAA+TGG 0.553837 6_2:-80853465 Msa0931410:CDS
GGAGGGAATCATGCGTGCGG+CGG 0.556091 6_2:+80855401 None:intergenic
TACCTATAATAAGAATATTG+AGG 0.557454 6_2:-80853493 Msa0931410:CDS
AAATGATCCGCAGGTGAAGG+GGG 0.559516 6_2:+80852626 None:intergenic
CTGAACAATGCCCTGAAGAA+GGG 0.562898 6_2:-80853081 Msa0931410:CDS
TTGAAACATGGAGCCAATGC+TGG 0.568407 6_2:-80853420 Msa0931410:intron
TGCTATGAGGAAGAAGATAC+GGG 0.568469 6_2:-80849998 Msa0931410:CDS
AATCCACGATATGCTTGTGT+AGG 0.569340 6_2:+80855627 None:intergenic
TGTGACAGATTCGTTTGGGA+TGG 0.570034 6_2:-80853527 Msa0931410:intron
TTTGAAGTTGAGTTGAAACA+TGG 0.570207 6_2:-80853432 Msa0931410:CDS
AAGATGGGCCAGGAGCACCT+GGG 0.570888 6_2:-80851080 Msa0931410:CDS
AAGAGCTGTCTGATGCTATG+AGG 0.570930 6_2:-80850011 Msa0931410:CDS
TATGGAAGAGTAGACGTCAC+TGG 0.572351 6_2:-80853106 Msa0931410:CDS
TGAAAATGAGAAGAACGAAC+GGG 0.572470 6_2:+80855347 None:intergenic
TTGAATCTTCAGGAAGCTGG+AGG 0.572995 6_2:-80853148 Msa0931410:intron
GTAGATGCAAAATTGAAGGA+AGG 0.577399 6_2:+80849401 None:intergenic
AGATGGTTCTCCAAATGTAG+TGG 0.579625 6_2:-80850377 Msa0931410:CDS
GTCAAGTATAAGGTAGGACT+AGG 0.580370 6_2:-80855663 Msa0931410:five_prime_UTR
ACTTGACGCAAATGATCCGC+AGG 0.584569 6_2:+80852617 None:intergenic
AGCTAGTGCTACAGCTGTGG+AGG 0.584663 6_2:-80853246 Msa0931410:intron
ATTCTACAGAAAGATGGGCC+AGG 0.587158 6_2:-80851090 Msa0931410:intron
AGATGGGTCAAGTATAAGGT+AGG 0.587771 6_2:-80855669 Msa0931410:five_prime_UTR
TTGTTCCAACTCTCCAGTAG+TGG 0.589391 6_2:+80849677 None:intergenic
GTGATTGTAGCCATTGTGGT+TGG 0.591078 6_2:+80855432 None:intergenic
AAAAGTATTGGGTAGATGAG+TGG 0.592611 6_2:-80855748 Msa0931410:five_prime_UTR
CGGGCTGAATATGAGGCGGT+TGG 0.594896 6_2:-80849979 Msa0931410:CDS
GAGGAGTGGCCACAGAGAGG+TGG 0.596367 6_2:-80853474 Msa0931410:CDS
AGCCAATTACTCCTCTGGAA+AGG 0.597209 6_2:-80850338 Msa0931410:intron
ATGAAAATGAGAAGAACGAA+CGG 0.600197 6_2:+80855346 None:intergenic
ATGCAAGTATGAGTAGAAGA+TGG 0.601180 6_2:+80855812 None:intergenic
GTTAGCTAGTGCTACAGCTG+TGG 0.601973 6_2:-80853249 Msa0931410:CDS
CATTAATACGCAAATGCCAA+AGG 0.602261 6_2:+80849795 None:intergenic
AGCAAAGTTTGAACCTGCAG+AGG 0.602470 6_2:-80850617 Msa0931410:intron
GAGTGAGACGGTGGCTCTGG+TGG 0.602864 6_2:+80855377 None:intergenic
TTCGAGGGGACGATTCGGAA+CGG 0.614911 6_2:-80855124 Msa0931410:CDS
GACAATCCTGGACTGCACAA+TGG 0.620331 6_2:-80851056 Msa0931410:CDS
GATGGTTCTCCAAATGTAGT+GGG 0.623661 6_2:-80850376 Msa0931410:CDS
AGAAAGATGTGAGAAATGCG+AGG 0.626873 6_2:+80855273 None:intergenic
CCGAATGGGGTTGAATGACA+AGG 0.626939 6_2:-80852588 Msa0931410:intron
CCATTGGCTCCACCTCTCTG+TGG 0.637470 6_2:+80853465 None:intergenic
GCCGGTGATTGTAGCCATTG+TGG 0.638714 6_2:+80855428 None:intergenic
GGCGGAGGGAATCATGCGTG+CGG 0.643016 6_2:+80855398 None:intergenic
CTGGTGCGCACACACTGGGG+CGG 0.645690 6_2:-80852458 Msa0931410:CDS
GGGTGAAAGTATAAATGTAG+GGG 0.647476 6_2:+80849592 None:intergenic
TATCTGGTGCGCACACACTG+GGG 0.652499 6_2:-80852461 Msa0931410:CDS
AATGATCCGCAGGTGAAGGG+GGG 0.652617 6_2:+80852627 None:intergenic
ATAATAAGAATATTGAGGAG+TGG 0.654700 6_2:-80853488 Msa0931410:CDS
GGAGAAGTTCGTGCTTCGAG+GGG 0.655631 6_2:-80855138 Msa0931410:CDS
CAAGCTTAAAACCTTTCCAG+AGG 0.659132 6_2:+80850327 None:intergenic
AAACCTACACAAGCATATCG+TGG 0.661632 6_2:-80855630 Msa0931410:five_prime_UTR
GTGGTTGGTGAAGAGAGTGA+AGG 0.663024 6_2:+80855447 None:intergenic
ACTCTCTTCACCAACCACAA+TGG 0.666345 6_2:-80855442 Msa0931410:CDS
AAACAATGTGATAGAGCCAG+AGG 0.667902 6_2:-80849637 Msa0931410:three_prime_UTR
CGGTCTAGACCAGACCGCAG+TGG 0.670072 6_2:-80852438 Msa0931410:CDS
AGAACGCAAGCAATTGAGCG+AGG 0.671598 6_2:+80855299 None:intergenic
CAGGTTTGCCCCAGCCACTG+CGG 0.673272 6_2:+80852424 None:intergenic
GATGGGCCAGGAGCACCTGG+GGG 0.675083 6_2:-80851078 Msa0931410:CDS
CAAACCTGAGACTAAATACA+CGG 0.675596 6_2:-80852409 Msa0931410:intron
GGATTATCATCCAAAACACA+AGG 0.696794 6_2:-80855562 Msa0931410:five_prime_UTR
GAGATGGAATCAGCTTTGTG+GGG 0.697416 6_2:+80849517 None:intergenic
ATTGAGGAGTGGCCACAGAG+AGG 0.708811 6_2:-80853477 Msa0931410:CDS
GATACGGGCTGAATATGAGG+CGG 0.710767 6_2:-80849983 Msa0931410:CDS
AAATGAGAAGAACGAACGGG+AGG 0.713916 6_2:+80855350 None:intergenic
GGAGGTTGAGAGTGAGACGG+TGG 0.718548 6_2:+80855368 None:intergenic
ACGGGAGGTTGAGAGTGAGA+CGG 0.719482 6_2:+80855365 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAGAATATAAAATAA+TGG + chr6_2:80850873-80850892 None:intergenic 10.0%
!!! TTATTTTTTGATTATTTTGT+TGG - chr6_2:80854094-80854113 Msa0931410:intron 10.0%
!!! TATTTTTTGATTATTTTGTT+GGG - chr6_2:80854095-80854114 Msa0931410:intron 10.0%
!!! TATTTCACAAATAATTTTAT+GGG + chr6_2:80854359-80854378 None:intergenic 10.0%
!!! ATATTTCACAAATAATTTTA+TGG + chr6_2:80854360-80854379 None:intergenic 10.0%
!! ATAAAAAAGAAAACTTTAAT+AGG + chr6_2:80854665-80854684 None:intergenic 10.0%
!! TTATTTATTTATTTAGATGC+TGG - chr6_2:80852434-80852453 Msa0931410:CDS 15.0%
!!! AAATGAGACATTTTTTTTTT+TGG + chr6_2:80853124-80853143 None:intergenic 15.0%
!!! ATAATCAAATAGTTTTTGAA+TGG - chr6_2:80853922-80853941 Msa0931410:intron 15.0%
!! AAAACAATATAAGATTCATT+TGG - chr6_2:80853964-80853983 Msa0931410:intron 15.0%
!!! ATTATTATCACATGTAATTT+TGG - chr6_2:80854991-80855010 Msa0931410:intron 15.0%
!!! TTTTATTTTTTTACAGACTA+CGG + chr6_2:80855333-80855352 None:intergenic 15.0%
!! ATTTCAATAAAATTTGTGTT+TGG - chr6_2:80855819-80855838 Msa0931410:five_prime_UTR 15.0%
!!! TTTTTCCCATAAAAAAGTAT+TGG - chr6_2:80849324-80849343 Msa0931410:three_prime_UTR 20.0%
!!! TTTTCCCATAAAAAAGTATT+GGG - chr6_2:80849325-80849344 Msa0931410:three_prime_UTR 20.0%
!!! TTGATTTCTCTGTAATTTTA+TGG - chr6_2:80850193-80850212 Msa0931410:intron 20.0%
!!! GTTGTTTTTATAAGCTATAT+TGG - chr6_2:80850334-80850353 Msa0931410:intron 20.0%
!!! AAATACGTTAAGAGTATATT+TGG - chr6_2:80850510-80850529 Msa0931410:intron 20.0%
!!! AGTATATTTGGTTTCATTTT+TGG - chr6_2:80850522-80850541 Msa0931410:intron 20.0%
!! AGAATCAATTTAACAATGTT+TGG - chr6_2:80850570-80850589 Msa0931410:intron 20.0%
!! GAATCAATTTAACAATGTTT+GGG - chr6_2:80850571-80850590 Msa0931410:intron 20.0%
!! TTAAATTGATATGTGATTTC+CGG - chr6_2:80850910-80850929 Msa0931410:intron 20.0%
!! TACCTATAATAAGAATATTG+AGG - chr6_2:80851591-80851610 Msa0931410:intron 20.0%
!! ATTACTCCAATTAGATATAT+GGG + chr6_2:80852045-80852064 None:intergenic 20.0%
!! TATTACTCCAATTAGATATA+TGG + chr6_2:80852046-80852065 None:intergenic 20.0%
!!! GAGACAATAAGTTTTTTATT+AGG - chr6_2:80852153-80852172 Msa0931410:intron 20.0%
!!! AATAAATAAGGGTATATTAG+TGG + chr6_2:80853211-80853230 None:intergenic 20.0%
!! GGTTGAAATACAATAAATAA+GGG + chr6_2:80853222-80853241 None:intergenic 20.0%
!!! ACTCAACTCAAATTTTAATT+CGG - chr6_2:80853490-80853509 Msa0931410:CDS 20.0%
!! TATTCATATCTCTTGAAATT+TGG + chr6_2:80853711-80853730 None:intergenic 20.0%
!! TACTTAAGATTATGTATAGT+TGG + chr6_2:80853857-80853876 None:intergenic 20.0%
!!! ATTTTATAACAGTATAGGAA+GGG - chr6_2:80854131-80854150 Msa0931410:intron 20.0%
!! TTGTAATTATTGTTACATAC+AGG - chr6_2:80854192-80854211 Msa0931410:intron 20.0%
!! TGTTGAATAAATATGAACAT+GGG + chr6_2:80854316-80854335 None:intergenic 20.0%
!! ATGTTGAATAAATATGAACA+TGG + chr6_2:80854317-80854336 None:intergenic 20.0%
!! AAATTATTTGTGAAATATGC+AGG - chr6_2:80854362-80854381 Msa0931410:intron 20.0%
!!! TTCTTTTTTATCTGTTTTTC+AGG - chr6_2:80854674-80854693 Msa0931410:intron 20.0%
!!! TCTTTTTTATCTGTTTTTCA+GGG - chr6_2:80854675-80854694 Msa0931410:intron 20.0%
!! AAATCTTAAATGAAGAAGAA+AGG - chr6_2:80855014-80855033 Msa0931410:intron 20.0%
!! CAATAACAATTATGATGTTT+AGG + chr6_2:80855167-80855186 None:intergenic 20.0%
!!! AATTTTACCCTTTATATCAT+TGG - chr6_2:80855537-80855556 Msa0931410:five_prime_UTR 20.0%
!! GAAATCATATAAGAAAAACA+AGG + chr6_2:80855633-80855652 None:intergenic 20.0%
!! GGATTAATAAGAAAACTAAA+AGG + chr6_2:80855665-80855684 None:intergenic 20.0%
!!! AATGTTTTTACATTACAACA+CGG - chr6_2:80855707-80855726 Msa0931410:five_prime_UTR 20.0%
!!! TCATAGATCAATTTCATTTT+GGG + chr6_2:80855763-80855782 None:intergenic 20.0%
!!! ATCATAGATCAATTTCATTT+TGG + chr6_2:80855764-80855783 None:intergenic 20.0%
!!! TCTACCCAATACTTTTTTAT+GGG + chr6_2:80849332-80849351 None:intergenic 25.0%
!!! ATCTACCCAATACTTTTTTA+TGG + chr6_2:80849333-80849352 None:intergenic 25.0%
! TAAAACTCAACGAAACAAAA+TGG - chr6_2:80849594-80849613 Msa0931410:three_prime_UTR 25.0%
!!! ATTTTCAGTGCTTTTTTTCT+TGG - chr6_2:80850075-80850094 Msa0931410:intron 25.0%
! CTTGGATATCAAGATTATTA+GGG + chr6_2:80850486-80850505 None:intergenic 25.0%
! TTGTCTGAATTAATTCTAAC+TGG - chr6_2:80850615-80850634 Msa0931410:intron 25.0%
! TTAGTTAAAAGTGAGCTAAA+TGG + chr6_2:80850741-80850760 None:intergenic 25.0%
!! TCCAAATCAATTTTTGTCAT+CGG - chr6_2:80850772-80850791 Msa0931410:intron 25.0%
! TTAGTTACTTAATGTGTGTT+TGG + chr6_2:80850808-80850827 None:intergenic 25.0%
! TTGAATCAATCATCAAACAA+CGG + chr6_2:80850968-80850987 None:intergenic 25.0%
!! AAACTAAAGCATCAACTAAT+TGG - chr6_2:80851132-80851151 Msa0931410:intron 25.0%
! TTTAATGTAATCACATGTGT+CGG + chr6_2:80851235-80851254 None:intergenic 25.0%
! GTAAAGCTATAAATCTCTTA+TGG + chr6_2:80851350-80851369 None:intergenic 25.0%
!!! CTTTTTTCTTTTCATTGTGA+CGG - chr6_2:80851518-80851537 Msa0931410:intron 25.0%
! CTCCTCAATATTCTTATTAT+AGG + chr6_2:80851596-80851615 None:intergenic 25.0%
! ATAATAAGAATATTGAGGAG+TGG - chr6_2:80851596-80851615 Msa0931410:intron 25.0%
! CAATATTCAGATATAATTGG+TGG + chr6_2:80851704-80851723 None:intergenic 25.0%
! GAGCAATATTCAGATATAAT+TGG + chr6_2:80851707-80851726 None:intergenic 25.0%
!! CATATTTCATGGGAATTTTT+GGG + chr6_2:80851962-80851981 None:intergenic 25.0%
! GTAAAACCCATATATCTAAT+TGG - chr6_2:80852036-80852055 Msa0931410:intron 25.0%
! AATCATGTTTAATAGCTTGA+GGG + chr6_2:80852720-80852739 None:intergenic 25.0%
! AAATCATGTTTAATAGCTTG+AGG + chr6_2:80852721-80852740 None:intergenic 25.0%
! TGGTAAAATAATCATTCGAA+TGG - chr6_2:80852842-80852861 Msa0931410:intron 25.0%
! AAAATAATCATTCGAATGGA+TGG - chr6_2:80852846-80852865 Msa0931410:intron 25.0%
! TCACCTTTAGACTTAATAAA+AGG - chr6_2:80852986-80853005 Msa0931410:intron 25.0%
!! TGACCTTTTATTAAGTCTAA+AGG + chr6_2:80852992-80853011 None:intergenic 25.0%
! GGGTTGAAATACAATAAATA+AGG + chr6_2:80853223-80853242 None:intergenic 25.0%
! ATGAGAAACTTATAATGAGA+TGG - chr6_2:80853355-80853374 Msa0931410:intron 25.0%
! AACAATTGTAGCAAAGATTT+AGG + chr6_2:80853809-80853828 None:intergenic 25.0%
!!! TTTTTGATTATTTTGTTGGG+AGG - chr6_2:80854098-80854117 Msa0931410:intron 25.0%
!!! TTTTGATTATTTTGTTGGGA+GGG - chr6_2:80854099-80854118 Msa0931410:intron 25.0%
!! GATTTTATAACAGTATAGGA+AGG - chr6_2:80854130-80854149 Msa0931410:intron 25.0%
! AAAAAAGGATGAAGATCTAT+TGG - chr6_2:80854225-80854244 Msa0931410:intron 25.0%
!!! TGTTTTGTGCATTTTTAGAT+GGG - chr6_2:80854509-80854528 Msa0931410:intron 25.0%
! GAAAACTTTAATAGGTGATT+TGG + chr6_2:80854657-80854676 None:intergenic 25.0%
! ATATCTGTTTGGAAACTAAT+TGG - chr6_2:80855206-80855225 Msa0931410:intron 25.0%
!!! CACTTGTTATTTTTTTCCTT+TGG - chr6_2:80855273-80855292 Msa0931410:CDS 25.0%
!! AGATTTTCTTCTTACTTGTA+GGG + chr6_2:80855516-80855535 None:intergenic 25.0%
! CTGAAATCCAATGATATAAA+GGG + chr6_2:80855547-80855566 None:intergenic 25.0%
! GAGAATCAGAAAAATTGAAA+TGG + chr6_2:80855611-80855630 None:intergenic 25.0%
!! CATAGATCAATTTCATTTTG+GGG + chr6_2:80855762-80855781 None:intergenic 25.0%
!! AGAGTCATTTTCATGTACTT+GGG + chr6_2:80849387-80849406 None:intergenic 30.0%
!! AAGAGTCATTTTCATGTACT+TGG + chr6_2:80849388-80849407 None:intergenic 30.0%
AAGTACATGAAAATGACTCT+TGG - chr6_2:80849387-80849406 Msa0931410:three_prime_UTR 30.0%
AGTACATGAAAATGACTCTT+GGG - chr6_2:80849388-80849407 Msa0931410:three_prime_UTR 30.0%
AATAAGATGGGTCAAGTATA+AGG - chr6_2:80849411-80849430 Msa0931410:three_prime_UTR 30.0%
!! ACAAGAAGTAGAGTTTTGAT+TGG - chr6_2:80849491-80849510 Msa0931410:three_prime_UTR 30.0%
ATGAAAATGAGAAGAACGAA+CGG + chr6_2:80849741-80849760 None:intergenic 30.0%
!! TAAGTTTTGTGAGACTGTTT+AGG + chr6_2:80850425-80850444 None:intergenic 30.0%
CCTTGGATATCAAGATTATT+AGG + chr6_2:80850487-80850506 None:intergenic 30.0%
CCTAATAATCTTGATATCCA+AGG - chr6_2:80850484-80850503 Msa0931410:intron 30.0%
TTCAGACAAAATCAATCCTA+CGG + chr6_2:80850604-80850623 None:intergenic 30.0%
ATTAATTCTAACTGGAAGCT+AGG - chr6_2:80850623-80850642 Msa0931410:CDS 30.0%
TTAATTCTAACTGGAAGCTA+GGG - chr6_2:80850624-80850643 Msa0931410:CDS 30.0%
AAATGGAAGTGGTTTATGTT+TGG + chr6_2:80850724-80850743 None:intergenic 30.0%
CATTAAGTAACTAAGTTCCT+TGG - chr6_2:80850814-80850833 Msa0931410:intron 30.0%
GTCAGTGACTCATATTATTA+GGG - chr6_2:80850836-80850855 Msa0931410:CDS 30.0%
TCAGTGACTCATATTATTAG+GGG - chr6_2:80850837-80850856 Msa0931410:CDS 30.0%
TGTTAATGGAACACTAAAAC+CGG + chr6_2:80850932-80850951 None:intergenic 30.0%
ACGATACACTATAAATTGTC+TGG - chr6_2:80850996-80851015 Msa0931410:intron 30.0%
! TGTCATATGATTTGTAGCAT+AGG - chr6_2:80851487-80851506 Msa0931410:intron 30.0%
TTCAAATCTTAAGCTACCAT+TGG + chr6_2:80851638-80851657 None:intergenic 30.0%
!! TTTGAAGTTGAGTTGAAACA+TGG - chr6_2:80851652-80851671 Msa0931410:intron 30.0%
TAATGAATACATACCAGCAT+TGG + chr6_2:80851680-80851699 None:intergenic 30.0%
TTATATCTGAATATTGCTCG+TGG - chr6_2:80851708-80851727 Msa0931410:intron 30.0%
GAAGTTTCAATGCATTTACA+AGG + chr6_2:80851763-80851782 None:intergenic 30.0%
AATATTTGTCTTTGATTGGC+TGG + chr6_2:80851787-80851806 None:intergenic 30.0%
CCTGAATATTTGTCTTTGAT+TGG + chr6_2:80851791-80851810 None:intergenic 30.0%
CCAATCAAAGACAAATATTC+AGG - chr6_2:80851788-80851807 Msa0931410:intron 30.0%
ATCAATCTTGAAGTCAAAGT+AGG + chr6_2:80851874-80851893 None:intergenic 30.0%
! ACCATTTTCTTTGAATCTTC+AGG - chr6_2:80851926-80851945 Msa0931410:intron 30.0%
TCCTGAAGATTCAAAGAAAA+TGG + chr6_2:80851930-80851949 None:intergenic 30.0%
! CCATATTTCATGGGAATTTT+TGG + chr6_2:80851963-80851982 None:intergenic 30.0%
CCAAAAATTCCCATGAAATA+TGG - chr6_2:80851960-80851979 Msa0931410:intron 30.0%
TCTACTCTTCCATATTTCAT+GGG + chr6_2:80851972-80851991 None:intergenic 30.0%
! TTAGATATATGGGTTTTACC+AGG + chr6_2:80852035-80852054 None:intergenic 30.0%
TGGATAAGCTACTGTTAATT+TGG - chr6_2:80852116-80852135 Msa0931410:intron 30.0%
GGATAAGCTACTGTTAATTT+GGG - chr6_2:80852117-80852136 Msa0931410:intron 30.0%
AACAGTTAGCCATATAGAAA+TGG - chr6_2:80852188-80852207 Msa0931410:intron 30.0%
!!! TGATGATATGATGCCTTTTT+TGG - chr6_2:80852268-80852287 Msa0931410:intron 30.0%
!!! TATGATGCCTTTTTTGGTTT+TGG - chr6_2:80852274-80852293 Msa0931410:intron 30.0%
AACCAAACCAAAACCAAAAA+AGG + chr6_2:80852284-80852303 None:intergenic 30.0%
TCCAATGTAAACAAGCAATT+TGG - chr6_2:80852317-80852336 Msa0931410:intron 30.0%
TCCAAATTGCTTGTTTACAT+TGG + chr6_2:80852321-80852340 None:intergenic 30.0%
CAATTTGGACAGGTTTAATT+TGG - chr6_2:80852332-80852351 Msa0931410:intron 30.0%
CCGAAAAAACTAGTAAACTA+GGG + chr6_2:80852393-80852412 None:intergenic 30.0%
!!! CCCTAGTTTACTAGTTTTTT+CGG - chr6_2:80852390-80852409 Msa0931410:intron 30.0%
ACCGAAAAAACTAGTAAACT+AGG + chr6_2:80852394-80852413 None:intergenic 30.0%
TATCATGTTATTGTATCTGC+AGG - chr6_2:80852588-80852607 Msa0931410:intron 30.0%
TTAATAGCTTGAGGGTAAAA+AGG + chr6_2:80852712-80852731 None:intergenic 30.0%
! TAGTTTGAAGCTATAGATGA+TGG - chr6_2:80852822-80852841 Msa0931410:intron 30.0%
!! ATGACTTGAAGGTGTTATAA+GGG + chr6_2:80852890-80852909 None:intergenic 30.0%
!! AATGACTTGAAGGTGTTATA+AGG + chr6_2:80852891-80852910 None:intergenic 30.0%
TATAACACCTTCAAGTCATT+TGG - chr6_2:80852891-80852910 Msa0931410:intron 30.0%
AGAAACTTATAATGAGATGG+AGG - chr6_2:80853358-80853377 Msa0931410:intron 30.0%
GAAACTTATAATGAGATGGA+GGG - chr6_2:80853359-80853378 Msa0931410:intron 30.0%
! TGATGATGATTTCTTGATGA+TGG + chr6_2:80853409-80853428 None:intergenic 30.0%
! CCACTTATAAACACATTTTC+AGG + chr6_2:80853640-80853659 None:intergenic 30.0%
CCTGAAAATGTGTTTATAAG+TGG - chr6_2:80853637-80853656 Msa0931410:intron 30.0%
TTTCTCATTCTACAGAAAGA+TGG - chr6_2:80853988-80854007 Msa0931410:intron 30.0%
TTCTCATTCTACAGAAAGAT+GGG - chr6_2:80853989-80854008 Msa0931410:intron 30.0%
!! TTTGATTATTTTGTTGGGAG+GGG - chr6_2:80854100-80854119 Msa0931410:intron 30.0%
! GGGTGATTTTATAACAGTAT+AGG - chr6_2:80854126-80854145 Msa0931410:intron 30.0%
ACAGGACATCAAAGAAAAAA+AGG - chr6_2:80854210-80854229 Msa0931410:intron 30.0%
! ATTCAGCAATTTTACCTTGA+AGG + chr6_2:80854287-80854306 None:intergenic 30.0%
!! CTGTTTTGTGCATTTTTAGA+TGG - chr6_2:80854508-80854527 Msa0931410:intron 30.0%
ATGCAGACATGAAAAAGAAA+AGG + chr6_2:80854593-80854612 None:intergenic 30.0%
! TTCATTTTCTTGATGCTTGT+TGG - chr6_2:80854802-80854821 Msa0931410:intron 30.0%
!! AAGAAGCTATTTTCAAATCG+TGG - chr6_2:80854967-80854986 Msa0931410:intron 30.0%
!! AGAAGCTATTTTCAAATCGT+GGG - chr6_2:80854968-80854987 Msa0931410:intron 30.0%
! CATAATTGTTATTGCTGCTT+TGG - chr6_2:80855173-80855192 Msa0931410:intron 30.0%
!!! GCTATTTTGACATATCTGTT+TGG - chr6_2:80855195-80855214 Msa0931410:intron 30.0%
GAAATTCACTACAAGTGAAT+CGG - chr6_2:80855242-80855261 Msa0931410:intron 30.0%
AAAAACAAATACTCCACTAC+TGG - chr6_2:80855394-80855413 Msa0931410:CDS 30.0%
! AGTATAAATGTAGGGGTATA+TGG + chr6_2:80855488-80855507 None:intergenic 30.0%
! GATTTTCTTCTTACTTGTAG+GGG + chr6_2:80855515-80855534 None:intergenic 30.0%
! GAGATTTTCTTCTTACTTGT+AGG + chr6_2:80855517-80855536 None:intergenic 30.0%
GCTGAAATCCAATGATATAA+AGG + chr6_2:80855548-80855567 None:intergenic 30.0%
CAGAAAAATTGAAATGGTGA+AGG + chr6_2:80855605-80855624 None:intergenic 30.0%
ATTCGTAGATGCAAAATTGA+AGG + chr6_2:80855690-80855709 None:intergenic 30.0%
TACAACACGGAAAAGAATAA+TGG - chr6_2:80855720-80855739 Msa0931410:five_prime_UTR 30.0%
ATGCAAGTATGAGTAGAAGA+TGG + chr6_2:80849275-80849294 None:intergenic 35.0%
!! AAAAGTATTGGGTAGATGAG+TGG - chr6_2:80849336-80849355 Msa0931410:three_prime_UTR 35.0%
AATGACTCTTGGGAATAAGA+TGG - chr6_2:80849398-80849417 Msa0931410:three_prime_UTR 35.0%
ATGACTCTTGGGAATAAGAT+GGG - chr6_2:80849399-80849418 Msa0931410:three_prime_UTR 35.0%
!! TGTGTTTTGGATGATAATCC+TGG + chr6_2:80849522-80849541 None:intergenic 35.0%
GGATTATCATCCAAAACACA+AGG - chr6_2:80849522-80849541 Msa0931410:three_prime_UTR 35.0%
! CTTTTCTTCTCCTTGTGTTT+TGG + chr6_2:80849535-80849554 None:intergenic 35.0%
TGAAAATGAGAAGAACGAAC+GGG + chr6_2:80849740-80849759 None:intergenic 35.0%
TTCTCACATCTTTCTCAATC+AGG - chr6_2:80849819-80849838 Msa0931410:three_prime_UTR 35.0%
GTTTGTGTTAATTGCGTTTG+CGG - chr6_2:80849909-80849928 Msa0931410:CDS 35.0%
! TAAGTTCTGTCATCCTCTTT+TGG - chr6_2:80850050-80850069 Msa0931410:intron 35.0%
GCACTGAAAATTACCAAAAG+AGG + chr6_2:80850066-80850085 None:intergenic 35.0%
! GATTTAGCGTTTTCTTTGTC+TGG - chr6_2:80850139-80850158 Msa0931410:intron 35.0%
TTATTAGGGTCTGTTTGGAT+TGG + chr6_2:80850472-80850491 None:intergenic 35.0%
CAAGATTATTAGGGTCTGTT+TGG + chr6_2:80850477-80850496 None:intergenic 35.0%
! CTCTTAACGTATTTTCACCT+TGG + chr6_2:80850504-80850523 None:intergenic 35.0%
AAAAGTGAGCTAAATGGAAG+TGG + chr6_2:80850735-80850754 None:intergenic 35.0%
GCCGATGACAAAAATTGATT+TGG + chr6_2:80850776-80850795 None:intergenic 35.0%
ATAATATGAGTCACTGACCA+AGG + chr6_2:80850834-80850853 None:intergenic 35.0%
GGTCAGTGACTCATATTATT+AGG - chr6_2:80850835-80850854 Msa0931410:CDS 35.0%
!! TTCTTTGCACTAGTCTTTGT+AGG + chr6_2:80851031-80851050 None:intergenic 35.0%
AATTGGCCAACATGATATTG+TGG - chr6_2:80851149-80851168 Msa0931410:intron 35.0%
TCTATGCCACAATATCATGT+TGG + chr6_2:80851158-80851177 None:intergenic 35.0%
! CAACTCAGAGTTTGATAACT+AGG + chr6_2:80851434-80851453 None:intergenic 35.0%
ATATACCAGCCACATATAGA+TGG - chr6_2:80851459-80851478 Msa0931410:intron 35.0%
TTCTATGTGACAGATTCGTT+TGG - chr6_2:80851552-80851571 Msa0931410:intron 35.0%
TCTATGTGACAGATTCGTTT+GGG - chr6_2:80851553-80851572 Msa0931410:intron 35.0%
TTCTTATGAGCTGCAATTTC+AGG - chr6_2:80851737-80851756 Msa0931410:intron 35.0%
TTGAAGTCAAAGTAGGACTT+AGG + chr6_2:80851867-80851886 None:intergenic 35.0%
GTCTACTCTTCCATATTTCA+TGG + chr6_2:80851973-80851992 None:intergenic 35.0%
AATTTCTTCTTTGCCTCTGT+AGG - chr6_2:80852077-80852096 Msa0931410:intron 35.0%
!!! TGCCTTTTTTGGTTTTGGTT+TGG - chr6_2:80852279-80852298 Msa0931410:intron 35.0%
TGTAAACAAGCAATTTGGAC+AGG - chr6_2:80852322-80852341 Msa0931410:intron 35.0%
AACAACCCAGAAATCGAAAA+CGG + chr6_2:80852358-80852377 None:intergenic 35.0%
! AATACCCTGTGTTTTCCATA+AGG - chr6_2:80852520-80852539 Msa0931410:intron 35.0%
CAGGAAATTGTTGCATTATC+TGG - chr6_2:80852607-80852626 Msa0931410:CDS 35.0%
CAAACCTGAGACTAAATACA+CGG - chr6_2:80852675-80852694 Msa0931410:intron 35.0%
TATACCGTGTATTTAGTCTC+AGG + chr6_2:80852682-80852701 None:intergenic 35.0%
ACACTTATTACTGAGACAGA+AGG + chr6_2:80853085-80853104 None:intergenic 35.0%
GGTAATATCTCATCGAATGT+GGG + chr6_2:80853619-80853638 None:intergenic 35.0%
AGGTAATATCTCATCGAATG+TGG + chr6_2:80853620-80853639 None:intergenic 35.0%
!! GTACTCCTAATTTTAGAAGC+CGG - chr6_2:80853659-80853678 Msa0931410:intron 35.0%
!! CAAAACCGGCTTCTAAAATT+AGG + chr6_2:80853667-80853686 None:intergenic 35.0%
!! ATTTTAGAAGCCGGTTTTGT+AGG - chr6_2:80853668-80853687 Msa0931410:intron 35.0%
!! TTTTAGAAGCCGGTTTTGTA+GGG - chr6_2:80853669-80853688 Msa0931410:intron 35.0%
AAGTAAACTGAAGTAAGCCA+TGG + chr6_2:80853772-80853791 None:intergenic 35.0%
GAAGATACACAAAACTTGAC+AGG + chr6_2:80853886-80853905 None:intergenic 35.0%
GTTTGACAACTCTTACTTCA+AGG - chr6_2:80854056-80854075 Msa0931410:intron 35.0%
! AGCAATTTTACCTTGAAGGA+AGG + chr6_2:80854283-80854302 None:intergenic 35.0%
TGAGAAATATGCTGTAGATC+AGG - chr6_2:80854392-80854411 Msa0931410:intron 35.0%
! GTTCATTGTTTCTCTATTCC+TGG - chr6_2:80854882-80854901 Msa0931410:intron 35.0%
ATGCTATGAGGAAGAAGATA+CGG - chr6_2:80855085-80855104 Msa0931410:CDS 35.0%
!! TTGACTTTAGAGCCTTATCT+GGG + chr6_2:80855137-80855156 None:intergenic 35.0%
!! TTTGACTTTAGAGCCTTATC+TGG + chr6_2:80855138-80855157 None:intergenic 35.0%
CATTAATACGCAAATGCCAA+AGG + chr6_2:80855292-80855311 None:intergenic 35.0%
GTATAATTTCCTTAGTCCTC+TGG + chr6_2:80855466-80855485 None:intergenic 35.0%
! GGGTGAAAGTATAAATGTAG+GGG + chr6_2:80855495-80855514 None:intergenic 35.0%
! GGGGTGAAAGTATAAATGTA+GGG + chr6_2:80855496-80855515 None:intergenic 35.0%
! AGGGGTGAAAGTATAAATGT+AGG + chr6_2:80855497-80855516 None:intergenic 35.0%
AATTGAAATGGTGAAGGAGA+AGG + chr6_2:80855599-80855618 None:intergenic 35.0%
GTAGATGCAAAATTGAAGGA+AGG + chr6_2:80855686-80855705 None:intergenic 35.0%
GTACTTGGGATTCAAGTGTT+TGG + chr6_2:80849373-80849392 None:intergenic 40.0%
AGATGGGTCAAGTATAAGGT+AGG - chr6_2:80849415-80849434 Msa0931410:three_prime_UTR 40.0%
GTCAAGTATAAGGTAGGACT+AGG - chr6_2:80849421-80849440 Msa0931410:three_prime_UTR 40.0%
AAACCTACACAAGCATATCG+TGG - chr6_2:80849454-80849473 Msa0931410:three_prime_UTR 40.0%
AATCCACGATATGCTTGTGT+AGG + chr6_2:80849460-80849479 None:intergenic 40.0%
!!! GAGTTTTGATTGGCAAATCC+AGG - chr6_2:80849501-80849520 Msa0931410:three_prime_UTR 40.0%
AGAAAGATGTGAGAAATGCG+AGG + chr6_2:80849814-80849833 None:intergenic 40.0%
AAGCGCTAGAGAAGATATCA+AGG - chr6_2:80850014-80850033 Msa0931410:CDS 40.0%
GCTTGTTTGAGCTTATCTAC+TGG + chr6_2:80850450-80850469 None:intergenic 40.0%
! ATGTTTGGGTGTTTTTCCGT+AGG - chr6_2:80850585-80850604 Msa0931410:intron 40.0%
TCCATTAACAGTGTCTTTGC+TGG - chr6_2:80850942-80850961 Msa0931410:intron 40.0%
!! GTAATCACATGTGTCGGTTT+CGG + chr6_2:80851229-80851248 None:intergenic 40.0%
GACAAAGCTCCATCTATATG+TGG + chr6_2:80851471-80851490 None:intergenic 40.0%
TCTTTGAATCTTCAGGAAGC+TGG - chr6_2:80851933-80851952 Msa0931410:intron 40.0%
!! TAGGATTCTAGGACATGGAT+TGG - chr6_2:80852096-80852115 Msa0931410:intron 40.0%
TAGCCATATAGAAATGGCTG+TGG - chr6_2:80852194-80852213 Msa0931410:intron 40.0%
CAACCACAGCCATTTCTATA+TGG + chr6_2:80852200-80852219 None:intergenic 40.0%
!! ATTTGGCCGTTTTCGATTTC+TGG - chr6_2:80852349-80852368 Msa0931410:intron 40.0%
!! TTTGGCCGTTTTCGATTTCT+GGG - chr6_2:80852350-80852369 Msa0931410:intron 40.0%
! CGTCAAGTTTTCTACCGAAT+GGG - chr6_2:80852482-80852501 Msa0931410:intron 40.0%
! GTCAAGTTTTCTACCGAATG+GGG - chr6_2:80852483-80852502 Msa0931410:intron 40.0%
CCATCCTTATGGAAAACACA+GGG + chr6_2:80852527-80852546 None:intergenic 40.0%
! CCTGTGTTTTCCATAAGGAT+GGG - chr6_2:80852525-80852544 Msa0931410:intron 40.0%
! CTGTGTTTTCCATAAGGATG+GGG - chr6_2:80852526-80852545 Msa0931410:intron 40.0%
! TGTGTTTTCCATAAGGATGG+GGG - chr6_2:80852527-80852546 Msa0931410:intron 40.0%
AATACTTACCCCCATCCTTA+TGG + chr6_2:80852538-80852557 None:intergenic 40.0%
ATAAGGATGGGGGTAAGTAT+TGG - chr6_2:80852537-80852556 Msa0931410:intron 40.0%
TGCTCAACCAAATGACTTGA+AGG + chr6_2:80852901-80852920 None:intergenic 40.0%
! TCGCGTTAGTCTGATAACAT+CGG - chr6_2:80852935-80852954 Msa0931410:intron 40.0%
! AAGAGCGATTGCTCTTTTGT+TGG - chr6_2:80853029-80853048 Msa0931410:intron 40.0%
! AGAGCGATTGCTCTTTTGTT+GGG - chr6_2:80853030-80853049 Msa0931410:intron 40.0%
TACTGAGACAGAAGGAATCA+AGG + chr6_2:80853077-80853096 None:intergenic 40.0%
!! GATGGAGGGAGTATTACTTT+AGG - chr6_2:80853373-80853392 Msa0931410:intron 40.0%
CATCATCAATGCAACATCTC+TGG - chr6_2:80853427-80853446 Msa0931410:CDS 40.0%
CTAACTCAACCCTACAAAAC+CGG + chr6_2:80853681-80853700 None:intergenic 40.0%
AAACTGAAGTAAGCCATGGA+AGG + chr6_2:80853768-80853787 None:intergenic 40.0%
! GTTTTGTGTATCTTCAGAGC+TGG - chr6_2:80853891-80853910 Msa0931410:intron 40.0%
!! ATTATTTTGTTGGGAGGGGA+GGG - chr6_2:80854104-80854123 Msa0931410:intron 40.0%
TAACAGTATAGGAAGGGAAG+AGG - chr6_2:80854137-80854156 Msa0931410:intron 40.0%
TCAAAAAGAGCAGCATCAGT+TGG + chr6_2:80854256-80854275 None:intergenic 40.0%
! TTTTGACGATCCTTCCTTCA+AGG - chr6_2:80854270-80854289 Msa0931410:intron 40.0%
!!! ATCTGTTTTTCAGGGCATTG+TGG - chr6_2:80854683-80854702 Msa0931410:intron 40.0%
AGATGGTTCTCCAAATGTAG+TGG - chr6_2:80854707-80854726 Msa0931410:intron 40.0%
GATGGTTCTCCAAATGTAGT+GGG - chr6_2:80854708-80854727 Msa0931410:intron 40.0%
AACTTCTCTCCCACTACATT+TGG + chr6_2:80854720-80854739 None:intergenic 40.0%
AACCTTTCCAGAGGAGTAAT+TGG + chr6_2:80854751-80854770 None:intergenic 40.0%
CAAGCTTAAAACCTTTCCAG+AGG + chr6_2:80854760-80854779 None:intergenic 40.0%
! TTTTACTCCTGCATCAAACC+AGG + chr6_2:80854903-80854922 None:intergenic 40.0%
TGCTATGAGGAAGAAGATAC+GGG - chr6_2:80855086-80855105 Msa0931410:CDS 40.0%
CTGGAGAGTTGGAACAATTA+CGG - chr6_2:80855413-80855432 Msa0931410:CDS 40.0%
TGGAGAGTTGGAACAATTAC+GGG - chr6_2:80855414-80855433 Msa0931410:CDS 40.0%
! TGGAACAATTACGGGTTTTC+TGG - chr6_2:80855422-80855441 Msa0931410:CDS 40.0%
AAACAATGTGATAGAGCCAG+AGG - chr6_2:80855447-80855466 Msa0931410:CDS 40.0%
! AGAGATGGAATCAGCTTTGT+GGG + chr6_2:80855571-80855590 None:intergenic 40.0%
ACTCTCTTCACCAACCACAA+TGG - chr6_2:80849642-80849661 Msa0931410:three_prime_UTR 45.0%
GTGATTGTAGCCATTGTGGT+TGG + chr6_2:80849655-80849674 None:intergenic 45.0%
ACCACAATGGCTACAATCAC+CGG - chr6_2:80849655-80849674 Msa0931410:three_prime_UTR 45.0%
AAATGAGAAGAACGAACGGG+AGG + chr6_2:80849737-80849756 None:intergenic 45.0%
CAAGCAATTGAGCGAGGAAA+CGG + chr6_2:80849782-80849801 None:intergenic 45.0%
!! TTTGCGGTTTTTCAGCGAAG+AGG - chr6_2:80849925-80849944 Msa0931410:CDS 45.0%
! CTAGCGCTTTTCAACTGATC+AGG + chr6_2:80850003-80850022 None:intergenic 45.0%
GCCAGCAAAGACACTGTTAA+TGG + chr6_2:80850946-80850965 None:intergenic 45.0%
!! TAACAAAGGCGTCGACTTGT+CGG - chr6_2:80851275-80851294 Msa0931410:intron 45.0%
AAGCTCCATCTATATGTGGC+TGG + chr6_2:80851467-80851486 None:intergenic 45.0%
TGTGACAGATTCGTTTGGGA+TGG - chr6_2:80851557-80851576 Msa0931410:intron 45.0%
TTGAAACATGGAGCCAATGC+TGG - chr6_2:80851664-80851683 Msa0931410:intron 45.0%
TTGAATCTTCAGGAAGCTGG+AGG - chr6_2:80851936-80851955 Msa0931410:intron 45.0%
TATGGAAGAGTAGACGTCAC+TGG - chr6_2:80851978-80851997 Msa0931410:intron 45.0%
CTGAACAATGCCCTGAAGAA+GGG - chr6_2:80852003-80852022 Msa0931410:intron 45.0%
CTTTGCCTCTGTAGGATTCT+AGG - chr6_2:80852085-80852104 Msa0931410:intron 45.0%
CATGTCCTAGAATCCTACAG+AGG + chr6_2:80852093-80852112 None:intergenic 45.0%
!! CTCTGTAGGATTCTAGGACA+TGG - chr6_2:80852091-80852110 Msa0931410:intron 45.0%
! GCGTCAAGTTTTCTACCGAA+TGG - chr6_2:80852481-80852500 Msa0931410:intron 45.0%
CCTTGTCATTCAACCCCATT+CGG + chr6_2:80852499-80852518 None:intergenic 45.0%
! CCCTGTGTTTTCCATAAGGA+TGG - chr6_2:80852524-80852543 Msa0931410:intron 45.0%
CCCATCCTTATGGAAAACAC+AGG + chr6_2:80852528-80852547 None:intergenic 45.0%
CCATACAAAACCAGCTTGTG+AGG + chr6_2:80853461-80853480 None:intergenic 45.0%
!!! CCTCACAAGCTGGTTTTGTA+TGG - chr6_2:80853458-80853477 Msa0931410:CDS 45.0%
AGAACCTTCCTAACAACCGT+TGG - chr6_2:80853517-80853536 Msa0931410:CDS 45.0%
GAACCTTCCTAACAACCGTT+GGG - chr6_2:80853518-80853537 Msa0931410:CDS 45.0%
CCATGGAAGGTCTACACAAA+CGG + chr6_2:80853755-80853774 None:intergenic 45.0%
ATTCTACAGAAAGATGGGCC+AGG - chr6_2:80853994-80854013 Msa0931410:intron 45.0%
CTTTAACCATTGTGCAGTCC+AGG + chr6_2:80854037-80854056 None:intergenic 45.0%
!! GATTATTTTGTTGGGAGGGG+AGG - chr6_2:80854103-80854122 Msa0931410:intron 45.0%
!! TTATTTTGTTGGGAGGGGAG+GGG - chr6_2:80854105-80854124 Msa0931410:intron 45.0%
CAGGTTCAAACTTTGCTCCA+AGG + chr6_2:80854464-80854483 None:intergenic 45.0%
AGCAAAGTTTGAACCTGCAG+AGG - chr6_2:80854467-80854486 Msa0931410:intron 45.0%
!! TTTCAGGGCATTGTGGTAGA+TGG - chr6_2:80854690-80854709 Msa0931410:intron 45.0%
! AGCCAATTACTCCTCTGGAA+AGG - chr6_2:80854746-80854765 Msa0931410:intron 45.0%
! CTCTATTCCTGGTTTGATGC+AGG - chr6_2:80854893-80854912 Msa0931410:intron 45.0%
AAGAGCTGTCTGATGCTATG+AGG - chr6_2:80855073-80855092 Msa0931410:CDS 45.0%
! GAAGATACGGGCTGAATATG+AGG - chr6_2:80855098-80855117 Msa0931410:CDS 45.0%
ATACTCCACTACTGGAGAGT+TGG - chr6_2:80855402-80855421 Msa0931410:CDS 45.0%
TTGTTCCAACTCTCCAGTAG+TGG + chr6_2:80855410-80855429 None:intergenic 45.0%
! GAGATGGAATCAGCTTTGTG+GGG + chr6_2:80855570-80855589 None:intergenic 45.0%
GAGAGATGGAATCAGCTTTG+TGG + chr6_2:80855572-80855591 None:intergenic 45.0%
AAGGAGAAGGAAGAGAGAGA+TGG + chr6_2:80855586-80855605 None:intergenic 45.0%
!!! AATTTTTTTAAAATTAACAA+AGG - chr6_2:80851261-80851280 Msa0931410:intron 5.0%
!! ATTATATATAATTTAATGAA+AGG - chr6_2:80854831-80854850 Msa0931410:intron 5.0%
!! GTGGTTGGTGAAGAGAGTGA+AGG + chr6_2:80849640-80849659 None:intergenic 50.0%
ATTGAGCGAGGAAACGGAAC+TGG + chr6_2:80849776-80849795 None:intergenic 50.0%
AGAACGCAAGCAATTGAGCG+AGG + chr6_2:80849788-80849807 None:intergenic 50.0%
AGGAGAAGTTCGTGCTTCGA+GGG - chr6_2:80849945-80849964 Msa0931410:CDS 50.0%
GTTAGCTAGTGCTACAGCTG+TGG - chr6_2:80851835-80851854 Msa0931410:intron 50.0%
!! CCTTCTTCAGGGCATTGTTC+AGG + chr6_2:80852005-80852024 None:intergenic 50.0%
CCTGAACAATGCCCTGAAGA+AGG - chr6_2:80852002-80852021 Msa0931410:intron 50.0%
CAGGAAGTCTCCCTTCTTCA+GGG + chr6_2:80852016-80852035 None:intergenic 50.0%
AAATGATCCGCAGGTGAAGG+GGG + chr6_2:80852461-80852480 None:intergenic 50.0%
CAAATGATCCGCAGGTGAAG+GGG + chr6_2:80852462-80852481 None:intergenic 50.0%
GCAAATGATCCGCAGGTGAA+GGG + chr6_2:80852463-80852482 None:intergenic 50.0%
ACTTGACGCAAATGATCCGC+AGG + chr6_2:80852470-80852489 None:intergenic 50.0%
CCGAATGGGGTTGAATGACA+AGG - chr6_2:80852496-80852515 Msa0931410:intron 50.0%
ATTATCTGGTGCGCACACAC+TGG - chr6_2:80852621-80852640 Msa0931410:CDS 50.0%
TTATCTGGTGCGCACACACT+GGG - chr6_2:80852622-80852641 Msa0931410:CDS 50.0%
TAACATCGGTCTCTGCTGAG+AGG - chr6_2:80852949-80852968 Msa0931410:intron 50.0%
CCGTTTGTGTAGACCTTCCA+TGG - chr6_2:80853752-80853771 Msa0931410:intron 50.0%
GACAATCCTGGACTGCACAA+TGG - chr6_2:80854028-80854047 Msa0931410:intron 50.0%
! TATTTTGTTGGGAGGGGAGG+GGG - chr6_2:80854106-80854125 Msa0931410:intron 50.0%
GTATAGGAAGGGAAGAGGAG+AGG - chr6_2:80854142-80854161 Msa0931410:intron 50.0%
CATGCCAAACTCAGCAACCT+TGG - chr6_2:80854444-80854463 Msa0931410:intron 50.0%
TGCTCCAAGGTTGCTGAGTT+TGG + chr6_2:80854451-80854470 None:intergenic 50.0%
GTAGCAGCCAATTACTCCTC+TGG - chr6_2:80854741-80854760 Msa0931410:intron 50.0%
! GATACGGGCTGAATATGAGG+CGG - chr6_2:80855101-80855120 Msa0931410:CDS 50.0%
GTGATAGAGCCAGAGGACTA+AGG - chr6_2:80855454-80855473 Msa0931410:CDS 50.0%
GCCGGTGATTGTAGCCATTG+TGG + chr6_2:80849659-80849678 None:intergenic 55.0%
ACGGGAGGTTGAGAGTGAGA+CGG + chr6_2:80849722-80849741 None:intergenic 55.0%
GAGGAGAAGTTCGTGCTTCG+AGG - chr6_2:80849944-80849963 Msa0931410:CDS 55.0%
GGAGAAGTTCGTGCTTCGAG+GGG - chr6_2:80849946-80849965 Msa0931410:CDS 55.0%
! TTCGAGGGGACGATTCGGAA+CGG - chr6_2:80849960-80849979 Msa0931410:CDS 55.0%
! CGTTTGGGATGGCATGATGC+TGG - chr6_2:80851568-80851587 Msa0931410:intron 55.0%
ATTGAGGAGTGGCCACAGAG+AGG - chr6_2:80851607-80851626 Msa0931410:intron 55.0%
AGCTAGTGCTACAGCTGTGG+AGG - chr6_2:80851838-80851857 Msa0931410:intron 55.0%
CCAGGAAGTCTCCCTTCTTC+AGG + chr6_2:80852017-80852036 None:intergenic 55.0%
CCTGAAGAAGGGAGACTTCC+TGG - chr6_2:80852014-80852033 Msa0931410:intron 55.0%
AATGATCCGCAGGTGAAGGG+GGG + chr6_2:80852460-80852479 None:intergenic 55.0%
CGCAAATGATCCGCAGGTGA+AGG + chr6_2:80852464-80852483 None:intergenic 55.0%
TATCTGGTGCGCACACACTG+GGG - chr6_2:80852623-80852642 Msa0931410:CDS 55.0%
TGGCCCAACGGTTGTTAGGA+AGG + chr6_2:80853524-80853543 None:intergenic 55.0%
TCCAGATGTCACGTCCTCCT+GGG - chr6_2:80853571-80853590 Msa0931410:intron 55.0%
CAACGTGAACAGACCTCTGC+AGG + chr6_2:80854483-80854502 None:intergenic 55.0%
GCTGAATATGAGGCGGTTGG+CGG - chr6_2:80855108-80855127 Msa0931410:CDS 55.0%
TGAGAGTGAGACGGTGGCTC+TGG + chr6_2:80849713-80849732 None:intergenic 60.0%
GGAGGTTGAGAGTGAGACGG+TGG + chr6_2:80849719-80849738 None:intergenic 60.0%
CGTGCTTCGAGGGGACGATT+CGG - chr6_2:80849955-80849974 Msa0931410:CDS 60.0%
! GCACCGACACCTCTGATCGA+AGG - chr6_2:80851192-80851211 Msa0931410:intron 60.0%
! GCGCCTTCGATCAGAGGTGT+CGG + chr6_2:80851198-80851217 None:intergenic 60.0%
!! CCATTGGCTCCACCTCTCTG+TGG + chr6_2:80851622-80851641 None:intergenic 60.0%
CCACAGAGAGGTGGAGCCAA+TGG - chr6_2:80851619-80851638 Msa0931410:intron 60.0%
TAGACCAGACCGCAGTGGCT+GGG - chr6_2:80852651-80852670 Msa0931410:intron 60.0%
GGTCTCTGCTGAGAGGCTTG+TGG - chr6_2:80852956-80852975 Msa0931410:intron 60.0%
GGTGTGCAGTCCTCACAAGC+TGG - chr6_2:80853448-80853467 Msa0931410:CDS 60.0%
TGGGTGGCCCAACGGTTGTT+AGG + chr6_2:80853528-80853547 None:intergenic 60.0%
CTCCAGATGTCACGTCCTCC+TGG - chr6_2:80853570-80853589 Msa0931410:intron 60.0%
!! AAAGATGGGCCAGGAGCACC+TGG - chr6_2:80854003-80854022 Msa0931410:intron 60.0%
!! AAGATGGGCCAGGAGCACCT+GGG - chr6_2:80854004-80854023 Msa0931410:intron 60.0%
CGGGCTGAATATGAGGCGGT+TGG - chr6_2:80855105-80855124 Msa0931410:CDS 60.0%
GGTTGGCGGAAGCCCAGATA+AGG - chr6_2:80855122-80855141 Msa0931410:CDS 60.0%
GGAGGGAATCATGCGTGCGG+CGG + chr6_2:80849686-80849705 None:intergenic 65.0%
GGCGGAGGGAATCATGCGTG+CGG + chr6_2:80849689-80849708 None:intergenic 65.0%
!! TGAGACGGTGGCTCTGGTGG+CGG + chr6_2:80849707-80849726 None:intergenic 65.0%
!! GAGTGAGACGGTGGCTCTGG+TGG + chr6_2:80849710-80849729 None:intergenic 65.0%
! ACCTCTGATCGAAGGCGCGC+TGG - chr6_2:80851200-80851219 Msa0931410:intron 65.0%
ACCAGCGCGCCTTCGATCAG+AGG + chr6_2:80851204-80851223 None:intergenic 65.0%
GAGGAGTGGCCACAGAGAGG+TGG - chr6_2:80851610-80851629 Msa0931410:intron 65.0%
CGGTCTAGACCAGACCGCAG+TGG - chr6_2:80852646-80852665 Msa0931410:intron 65.0%
CTAGACCAGACCGCAGTGGC+TGG - chr6_2:80852650-80852669 Msa0931410:intron 65.0%
AGACCAGACCGCAGTGGCTG+GGG - chr6_2:80852652-80852671 Msa0931410:intron 65.0%
CAGGTTTGCCCCAGCCACTG+CGG + chr6_2:80852663-80852682 None:intergenic 65.0%
CTCGATCGTGGGTGGCCCAA+CGG + chr6_2:80853536-80853555 None:intergenic 65.0%
CCACCCACGATCGAGCCACT+CGG - chr6_2:80853541-80853560 Msa0931410:intron 65.0%
CACCCACGATCGAGCCACTC+GGG - chr6_2:80853542-80853561 Msa0931410:intron 65.0%
GTCCCGAGTGGCTCGATCGT+GGG + chr6_2:80853547-80853566 None:intergenic 65.0%
TGTCCCGAGTGGCTCGATCG+TGG + chr6_2:80853548-80853567 None:intergenic 65.0%
! CATCTGGAGCGTGTCCCGAG+TGG + chr6_2:80853559-80853578 None:intergenic 65.0%
GCCCAGGAGGACGTGACATC+TGG + chr6_2:80853575-80853594 None:intergenic 65.0%
ATGTCACGTCCTCCTGGGCG+TGG - chr6_2:80853576-80853595 Msa0931410:intron 65.0%
TGTCACGTCCTCCTGGGCGT+GGG - chr6_2:80853577-80853596 Msa0931410:intron 65.0%
!! AGATGGGCCAGGAGCACCTG+GGG - chr6_2:80854005-80854024 Msa0931410:intron 65.0%
GATTGTCCCCCAGGTGCTCC+TGG + chr6_2:80854015-80854034 None:intergenic 65.0%
GAGCACCTGGGGGACAATCC+TGG - chr6_2:80854016-80854035 Msa0931410:intron 65.0%
GCAGTCCAGGATTGTCCCCC+AGG + chr6_2:80854024-80854043 None:intergenic 65.0%
GGGAATCATGCGTGCGGCGG+CGG + chr6_2:80849683-80849702 None:intergenic 70.0%
!! ACGGTGGCTCTGGTGGCGGA+GGG + chr6_2:80849703-80849722 None:intergenic 70.0%
TGCTGGCCCCCCTTCACCTG+CGG - chr6_2:80852451-80852470 Msa0931410:CDS 70.0%
CTGGTGCGCACACACTGGGG+CGG - chr6_2:80852626-80852645 Msa0931410:CDS 70.0%
TTGCCCCAGCCACTGCGGTC+TGG + chr6_2:80852658-80852677 None:intergenic 70.0%
CCGAGTGGCTCGATCGTGGG+TGG + chr6_2:80853544-80853563 None:intergenic 70.0%
GTCACGTCCTCCTGGGCGTG+GGG - chr6_2:80853578-80853597 Msa0931410:intron 70.0%
CACACTTCCCCACGCCCAGG+AGG + chr6_2:80853588-80853607 None:intergenic 70.0%
CTGCACACTTCCCCACGCCC+AGG + chr6_2:80853591-80853610 None:intergenic 70.0%
!! GATGGGCCAGGAGCACCTGG+GGG - chr6_2:80854006-80854025 Msa0931410:intron 70.0%
!! GACGGTGGCTCTGGTGGCGG+AGG + chr6_2:80849704-80849723 None:intergenic 75.0%
! CATGCGTGCGGCGGCGGCGC+CGG + chr6_2:80849677-80849696 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 80849251 80855855 80849251 ID=Msa0931410;Name=Msa0931410
chr6_2 mRNA 80849251 80855855 80849251 ID=Msa0931410-mRNA-1;Parent=Msa0931410;Name=Msa0931410-mRNA-1;_AED=0.08;_eAED=0.08;_QI=362|1|1|1|1|1|12|631|435
chr6_2 exon 80849251 80850034 80849251 ID=Msa0931410-mRNA-1:exon:14180;Parent=Msa0931410-mRNA-1
chr6_2 exon 80850339 80850410 80850339 ID=Msa0931410-mRNA-1:exon:14179;Parent=Msa0931410-mRNA-1
chr6_2 exon 80850618 80850722 80850618 ID=Msa0931410-mRNA-1:exon:14178;Parent=Msa0931410-mRNA-1
chr6_2 exon 80850815 80850892 80850815 ID=Msa0931410-mRNA-1:exon:14177;Parent=Msa0931410-mRNA-1
chr6_2 exon 80851029 80851103 80851029 ID=Msa0931410-mRNA-1:exon:14176;Parent=Msa0931410-mRNA-1
chr6_2 exon 80852410 80852496 80852410 ID=Msa0931410-mRNA-1:exon:14175;Parent=Msa0931410-mRNA-1
chr6_2 exon 80852589 80852656 80852589 ID=Msa0931410-mRNA-1:exon:14174;Parent=Msa0931410-mRNA-1
chr6_2 exon 80853071 80853158 80853071 ID=Msa0931410-mRNA-1:exon:14173;Parent=Msa0931410-mRNA-1
chr6_2 exon 80853247 80853347 80853247 ID=Msa0931410-mRNA-1:exon:14172;Parent=Msa0931410-mRNA-1
chr6_2 exon 80853421 80853541 80853421 ID=Msa0931410-mRNA-1:exon:14171;Parent=Msa0931410-mRNA-1
chr6_2 exon 80855035 80855166 80855035 ID=Msa0931410-mRNA-1:exon:14170;Parent=Msa0931410-mRNA-1
chr6_2 exon 80855266 80855855 80855266 ID=Msa0931410-mRNA-1:exon:14169;Parent=Msa0931410-mRNA-1
chr6_2 five_prime_UTR 80855494 80855855 80855494 ID=Msa0931410-mRNA-1:five_prime_utr;Parent=Msa0931410-mRNA-1
chr6_2 CDS 80855266 80855493 80855266 ID=Msa0931410-mRNA-1:cds;Parent=Msa0931410-mRNA-1
chr6_2 CDS 80855035 80855166 80855035 ID=Msa0931410-mRNA-1:cds;Parent=Msa0931410-mRNA-1
chr6_2 CDS 80853421 80853541 80853421 ID=Msa0931410-mRNA-1:cds;Parent=Msa0931410-mRNA-1
chr6_2 CDS 80853247 80853347 80853247 ID=Msa0931410-mRNA-1:cds;Parent=Msa0931410-mRNA-1
chr6_2 CDS 80853071 80853158 80853071 ID=Msa0931410-mRNA-1:cds;Parent=Msa0931410-mRNA-1
chr6_2 CDS 80852589 80852656 80852589 ID=Msa0931410-mRNA-1:cds;Parent=Msa0931410-mRNA-1
chr6_2 CDS 80852410 80852496 80852410 ID=Msa0931410-mRNA-1:cds;Parent=Msa0931410-mRNA-1
chr6_2 CDS 80851029 80851103 80851029 ID=Msa0931410-mRNA-1:cds;Parent=Msa0931410-mRNA-1
chr6_2 CDS 80850815 80850892 80850815 ID=Msa0931410-mRNA-1:cds;Parent=Msa0931410-mRNA-1
chr6_2 CDS 80850618 80850722 80850618 ID=Msa0931410-mRNA-1:cds;Parent=Msa0931410-mRNA-1
chr6_2 CDS 80850339 80850410 80850339 ID=Msa0931410-mRNA-1:cds;Parent=Msa0931410-mRNA-1
chr6_2 CDS 80849882 80850034 80849882 ID=Msa0931410-mRNA-1:cds;Parent=Msa0931410-mRNA-1
chr6_2 three_prime_UTR 80849251 80849881 80849251 ID=Msa0931410-mRNA-1:three_prime_utr;Parent=Msa0931410-mRNA-1
Gene Sequence

>Msa0931410

ATGGCAGAGCGTGTGTTACTCACTCCTTCACTCTCTTCACCAACCACAATGGCTACAATCACCGGCGCCGCCGCCGCACGCATGATTCCCTCCGCCACCAGAGCCACCGTCTCACTCTCAACCTCCCGTTCGTTCTTCTCATTTTCATCGTCATCTTCTTCCAGTTCCGTTTCCTCGCTCAATTGCTTGCGTTCTTCTCCTCGCATTTCTCACATCTTTCTCAATCAGCGAAGAGGAGAAGTTCGTGCTTCGAGGGGACGATTCGGAACGGTTGCGTTTGCGTCTGATCCTGATCAGTTGAAAAGCGCTAGAGAAGATATCAAGGAGCTTCTTAAGACTAAGTTCTGTCATCCTCTTTTGATTCGTTTGGGATGGCATGATGCTGGTACCTATAATAAGAATATTGAGGAGTGGCCACAGAGAGGTGGAGCCAATGGTAGCTTAAGATTTGAAGTTGAGTTGAAACATGGAGCCAATGCTGGCCTTGTAAATGCATTGAAACTTCTCCAGCCAATCAAAGACAAATATTCAGGCGTGACATATGCAGACTTATTTCAGTTAGCTAGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCAAAAATTCCCATGAAATATGGAAGAGTAGACGTCACTGGACCTGAACAATGCCCTGAAGAAGGGAGACTTCCTGATGCTGGCCCCCCTTCACCTGCGGATCATTTGCGTCAAGTTTTCTACCGAATGGGGTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGGGCGGTCTAGACCAGACCGCAGTGGCTGGGGCAAACCTGAGACTAAATACACGAAAGATGGGCCAGGAGCACCTGGGGGACAATCCTGGACTGCACAATGGTTAAAGTTTGACAACTCTTACTTCAAGGACATCAAAGAAAAAAAGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTCTTTTTGACGATCCTTCCTTCAAGGTATATGCTGAGAAATATGCTGTAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTCAGCAACCTTGGAGCAAAGTTTGAACCTGCAGAGGGCATTGTGGTAGATGGTTCTCCAAATGTAGTGGGAGAGAAGTTTGTAGCAGCCAATTACTCCTCTGGAAAGAAAGAGCTGTCTGATGCTATGAGGAAGAAGATACGGGCTGAATATGAGGCGGTTGGCGGAAGCCCAGATAAGGCTCTAAAGTCAAACTATTTCCTAAACATCATAATTGTTATTGCTGCTTTGGCTATTTTGACATATCTGTTTGGAAACTAA
Protein sequence

>Msa0931410

MAERVLLTPSLSSPTTMATITGAAAARMIPSATRATVSLSTSRSFFSFSSSSSSSSVSSLNCLRSSPRISHIFLNQRRGEVRASRGRFGTVAFASDPDQLKSAREDIKELLKTKFCHPLLIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLASATAVEEAGGPKIPMKYGRVDVTGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFDDPSFKVYAEKYAVDQEAFFKDYAEAHAKLSNLGAKFEPAEGIVVDGSPNVVGEKFVAANYSSGKKELSDAMRKKIRAEYEAVGGSPDKALKSNYFLNIIIVIAALAILTYLFGN*