Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384700 | XP_013466066.1 | 98.131 | 428 | 8 | 0 | 1 | 428 | 1 | 428 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384700 | sp|Q9LN62|RRA3_ARATH | 70.276 | 434 | 117 | 3 | 1 | 428 | 1 | 428 | 0.0 | 641 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384700 | A0A072VPP4 | 98.131 | 428 | 8 | 0 | 1 | 428 | 1 | 428 | 0.0 | 874 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006080 | Msa1384700 | 0.808299 | 3.316331e-50 | -8.615850e-47 |
| Msa0006480 | Msa1384700 | 0.817770 | 2.774918e-52 | -8.615850e-47 |
| Msa0011440 | Msa1384700 | -0.805667 | 1.195058e-49 | -8.615850e-47 |
| Msa0013270 | Msa1384700 | 0.820170 | 7.902656e-53 | -8.615850e-47 |
| Msa0025570 | Msa1384700 | 0.835212 | 1.913629e-56 | -8.615850e-47 |
| Msa0028690 | Msa1384700 | 0.830345 | 3.094094e-55 | -8.615850e-47 |
| Msa0038150 | Msa1384700 | -0.807886 | 4.059662e-50 | -8.615850e-47 |
| Msa0039750 | Msa1384700 | 0.806843 | 6.754492e-50 | -8.615850e-47 |
| Msa0042950 | Msa1384700 | -0.800570 | 1.354628e-48 | -8.615850e-47 |
| Msa0045810 | Msa1384700 | 0.810929 | 9.025377e-51 | -8.615850e-47 |
| Msa0046870 | Msa1384700 | 0.810503 | 1.115791e-50 | -8.615850e-47 |
| Msa0048380 | Msa1384700 | 0.807466 | 4.985872e-50 | -8.615850e-47 |
| Msa0063940 | Msa1384700 | 0.936413 | 1.808605e-97 | -8.615850e-47 |
| Msa0070120 | Msa1384700 | 0.807544 | 4.798752e-50 | -8.615850e-47 |
| Msa0072440 | Msa1384700 | 0.812144 | 4.913602e-51 | -8.615850e-47 |
| Msa0073110 | Msa1384700 | 0.844706 | 6.403402e-59 | -8.615850e-47 |
| Msa0095940 | Msa1384700 | 0.800564 | 1.358448e-48 | -8.615850e-47 |
| Msa0100540 | Msa1384700 | 0.803000 | 4.296159e-49 | -8.615850e-47 |
| Msa0101530 | Msa1384700 | 0.923037 | 4.497699e-89 | -8.615850e-47 |
| Msa0106540 | Msa1384700 | 0.806204 | 9.213352e-50 | -8.615850e-47 |
| Msa0117650 | Msa1384700 | 0.810352 | 1.202828e-50 | -8.615850e-47 |
| Msa0119240 | Msa1384700 | 0.803493 | 3.396217e-49 | -8.615850e-47 |
| Msa1352600 | Msa1384700 | -0.820500 | 6.639104e-53 | -8.615850e-47 |
| Msa1357840 | Msa1384700 | 0.801905 | 7.221752e-49 | -8.615850e-47 |
| Msa1361980 | Msa1384700 | 0.850511 | 1.619429e-60 | -8.615850e-47 |
| Msa1368390 | Msa1384700 | 0.809449 | 1.881720e-50 | -8.615850e-47 |
| Msa1384700 | Msa1387450 | -0.802297 | 5.998792e-49 | -8.615850e-47 |
| Msa1384700 | Msa1396200 | -0.803521 | 3.350679e-49 | -8.615850e-47 |
| Msa1384700 | Msa1400290 | -0.801369 | 9.303874e-49 | -8.615850e-47 |
| Msa1384700 | Msa1404050 | 0.812744 | 3.633517e-51 | -8.615850e-47 |
| Msa1384700 | Msa1404810 | -0.812036 | 5.188195e-51 | -8.615850e-47 |
| Msa1384700 | Msa1405530 | 0.820053 | 8.403451e-53 | -8.615850e-47 |
| Msa1384700 | Msa1405830 | 0.806291 | 8.835533e-50 | -8.615850e-47 |
| Msa1384700 | Msa1407810 | 0.815314 | 9.848128e-52 | -8.615850e-47 |
| Msa1384700 | Msa1408390 | 0.809722 | 1.644197e-50 | -8.615850e-47 |
| Msa1384700 | Msa1409360 | -0.806594 | 7.625451e-50 | -8.615850e-47 |
| Msa1384700 | Msa1409690 | 0.803406 | 3.539062e-49 | -8.615850e-47 |
| Msa1384700 | Msa1422860 | 0.836384 | 9.660860e-57 | -8.615850e-47 |
| Msa1384700 | Msa1428230 | -0.836403 | 9.552405e-57 | -8.615850e-47 |
| Msa1384700 | Msa1430950 | 0.806924 | 6.495112e-50 | -8.615850e-47 |
| Msa1384700 | Msa1433040 | 0.809362 | 1.964687e-50 | -8.615850e-47 |
| Msa1384700 | Msa1433360 | 0.832970 | 6.973003e-56 | -8.615850e-47 |
| Msa1384700 | Msa1437780 | 0.815064 | 1.119517e-51 | -8.615850e-47 |
| Msa1384700 | Msa1439250 | 0.811230 | 7.766464e-51 | -8.615850e-47 |
| Msa1384700 | Msa1439930 | 0.840346 | 9.188218e-58 | -8.615850e-47 |
| Msa1384700 | Msa1455360 | 0.802937 | 4.426342e-49 | -8.615850e-47 |
| Msa1384700 | Msa1459130 | -0.808924 | 2.438411e-50 | -8.615850e-47 |
| Msa1384700 | Msa1459920 | 0.804593 | 2.005058e-49 | -8.615850e-47 |
| Msa0603300 | Msa1384700 | 0.816945 | 4.257371e-52 | -8.615850e-47 |
| Msa0603310 | Msa1384700 | 0.848199 | 7.135487e-60 | -8.615850e-47 |
| Msa0606600 | Msa1384700 | 0.828502 | 8.673661e-55 | -8.615850e-47 |
| Msa0606820 | Msa1384700 | 0.832434 | 9.473191e-56 | -8.615850e-47 |
| Msa0610690 | Msa1384700 | 0.846172 | 2.565767e-59 | -8.615850e-47 |
| Msa0615070 | Msa1384700 | 0.815886 | 7.347187e-52 | -8.615850e-47 |
| Msa0619030 | Msa1384700 | -0.810065 | 1.387150e-50 | -8.615850e-47 |
| Msa0637590 | Msa1384700 | 0.811623 | 6.382476e-51 | -8.615850e-47 |
| Msa0637700 | Msa1384700 | 0.812706 | 3.703665e-51 | -8.615850e-47 |
| Msa0644330 | Msa1384700 | 0.861721 | 8.408668e-64 | -8.615850e-47 |
| Msa0644340 | Msa1384700 | 0.821021 | 5.037804e-53 | -8.615850e-47 |
| Msa0647300 | Msa1384700 | 0.836931 | 7.008154e-57 | -8.615850e-47 |
| Msa0652590 | Msa1384700 | 0.815355 | 9.646530e-52 | -8.615850e-47 |
| Msa0655200 | Msa1384700 | 0.807622 | 4.620561e-50 | -8.615850e-47 |
| Msa0657710 | Msa1384700 | 0.818116 | 2.318246e-52 | -8.615850e-47 |
| Msa0676570 | Msa1384700 | -0.816146 | 6.428169e-52 | -8.615850e-47 |
| Msa0679220 | Msa1384700 | 0.806337 | 8.639349e-50 | -8.615850e-47 |
| Msa0680460 | Msa1384700 | 0.809157 | 2.173337e-50 | -8.615850e-47 |
| Msa0682110 | Msa1384700 | 0.819528 | 1.107804e-52 | -8.615850e-47 |
| Msa0682160 | Msa1384700 | 0.810844 | 9.416643e-51 | -8.615850e-47 |
| Msa0686830 | Msa1384700 | 0.841910 | 3.567095e-58 | -8.615850e-47 |
| Msa0699170 | Msa1384700 | 0.813187 | 2.905494e-51 | -8.615850e-47 |
| Msa0701660 | Msa1384700 | 0.806941 | 6.442298e-50 | -8.615850e-47 |
| Msa0701800 | Msa1384700 | -0.810419 | 1.163600e-50 | -8.615850e-47 |
| Msa0702800 | Msa1384700 | 0.817085 | 3.958840e-52 | -8.615850e-47 |
| Msa0707330 | Msa1384700 | 0.818002 | 2.459761e-52 | -8.615850e-47 |
| Msa0712860 | Msa1384700 | 0.805468 | 1.315648e-49 | -8.615850e-47 |
| Msa0719600 | Msa1384700 | 0.847853 | 8.890328e-60 | -8.615850e-47 |
| Msa0721930 | Msa1384700 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
| Msa0729740 | Msa1384700 | -0.804620 | 1.978964e-49 | -8.615850e-47 |
| Msa0731580 | Msa1384700 | 0.810814 | 9.561740e-51 | -8.615850e-47 |
| Msa0736920 | Msa1384700 | 0.838975 | 2.089295e-57 | -8.615850e-47 |
| Msa0742370 | Msa1384700 | -0.861448 | 1.018456e-63 | -8.615850e-47 |
| Msa0744640 | Msa1384700 | 0.800546 | 1.369759e-48 | -8.615850e-47 |
| Msa0744710 | Msa1384700 | 0.814925 | 1.201619e-51 | -8.615850e-47 |
| Msa0754480 | Msa1384700 | 0.819275 | 1.264786e-52 | -8.615850e-47 |
| Msa0758990 | Msa1384700 | 0.800917 | 1.150935e-48 | -8.615850e-47 |
| Msa0762930 | Msa1384700 | 0.802988 | 4.319400e-49 | -8.615850e-47 |
| Msa0763370 | Msa1384700 | 0.821123 | 4.773911e-53 | -8.615850e-47 |
| Msa0773030 | Msa1384700 | 0.800227 | 1.591395e-48 | -8.615850e-47 |
| Msa0778570 | Msa1384700 | 0.834554 | 2.802391e-56 | -8.615850e-47 |
| Msa0779450 | Msa1384700 | -0.835965 | 1.234406e-56 | -8.615850e-47 |
| Msa0795750 | Msa1384700 | 0.823638 | 1.243475e-53 | -8.615850e-47 |
| Msa0800120 | Msa1384700 | 0.823058 | 1.698880e-53 | -8.615850e-47 |
| Msa0800150 | Msa1384700 | 0.830103 | 3.545135e-55 | -8.615850e-47 |
| Msa0800180 | Msa1384700 | 0.823290 | 1.499754e-53 | -8.615850e-47 |
| Msa0800480 | Msa1384700 | 0.812343 | 4.446025e-51 | -8.615850e-47 |
| Msa0805390 | Msa1384700 | 0.808607 | 2.850723e-50 | -8.615850e-47 |
| Msa0809920 | Msa1384700 | 0.800690 | 1.280191e-48 | -8.615850e-47 |
| Msa0810330 | Msa1384700 | 0.811744 | 6.005185e-51 | -8.615850e-47 |
| Msa0815940 | Msa1384700 | 0.827589 | 1.439086e-54 | -8.615850e-47 |
| Msa0823480 | Msa1384700 | -0.854704 | 1.030886e-61 | -8.615850e-47 |
| Msa0826240 | Msa1384700 | 0.815323 | 9.806581e-52 | -8.615850e-47 |
| Msa0828960 | Msa1384700 | 0.818189 | 2.231688e-52 | -8.615850e-47 |
| Msa0829250 | Msa1384700 | -0.812483 | 4.144111e-51 | -8.615850e-47 |
| Msa0829990 | Msa1384700 | 0.804263 | 2.349607e-49 | -8.615850e-47 |
| Msa0830930 | Msa1384700 | 0.822361 | 2.468180e-53 | -8.615850e-47 |
| Msa0838210 | Msa1384700 | 0.815600 | 8.507662e-52 | -8.615850e-47 |
| Msa0840960 | Msa1384700 | 0.818297 | 2.110090e-52 | -8.615850e-47 |
| Msa0841090 | Msa1384700 | 0.812201 | 4.775448e-51 | -8.615850e-47 |
| Msa0120860 | Msa1384700 | 0.818691 | 1.717468e-52 | -8.615850e-47 |
| Msa0121300 | Msa1384700 | 0.807571 | 4.736591e-50 | -8.615850e-47 |
| Msa0121320 | Msa1384700 | 0.826671 | 2.386453e-54 | -8.615850e-47 |
| Msa0127350 | Msa1384700 | -0.801239 | 9.890559e-49 | -8.615850e-47 |
| Msa0133140 | Msa1384700 | -0.814637 | 1.392141e-51 | -8.615850e-47 |
| Msa0136180 | Msa1384700 | -0.809787 | 1.592336e-50 | -8.615850e-47 |
| Msa0139500 | Msa1384700 | 0.812249 | 4.662263e-51 | -8.615850e-47 |
| Msa0141410 | Msa1384700 | 0.815397 | 9.439503e-52 | -8.615850e-47 |
| Msa0161230 | Msa1384700 | 0.810184 | 1.307866e-50 | -8.615850e-47 |
| Msa0166180 | Msa1384700 | 0.814266 | 1.681496e-51 | -8.615850e-47 |
| Msa0166190 | Msa1384700 | 0.813993 | 1.931684e-51 | -8.615850e-47 |
| Msa0168750 | Msa1384700 | 0.811337 | 7.363839e-51 | -8.615850e-47 |
| Msa0183310 | Msa1384700 | -0.837609 | 4.697690e-57 | -8.615850e-47 |
| Msa0185040 | Msa1384700 | 0.818736 | 1.677598e-52 | -8.615850e-47 |
| Msa0186400 | Msa1384700 | -0.804092 | 2.550301e-49 | -8.615850e-47 |
| Msa0187540 | Msa1384700 | 0.841165 | 5.606816e-58 | -8.615850e-47 |
| Msa0197170 | Msa1384700 | 0.819893 | 9.140773e-53 | -8.615850e-47 |
| Msa0217060 | Msa1384700 | 0.839561 | 1.472044e-57 | -8.615850e-47 |
| Msa0218500 | Msa1384700 | 0.820964 | 5.191993e-53 | -8.615850e-47 |
| Msa0224870 | Msa1384700 | 0.824829 | 6.530084e-54 | -8.615850e-47 |
| Msa0234150 | Msa1384700 | 0.800653 | 1.302776e-48 | -8.615850e-47 |
| Msa1238600 | Msa1384700 | 0.802005 | 6.889250e-49 | -8.615850e-47 |
| Msa1248060 | Msa1384700 | 0.800889 | 1.165898e-48 | -8.615850e-47 |
| Msa1251410 | Msa1384700 | 0.812857 | 3.432328e-51 | -8.615850e-47 |
| Msa1254870 | Msa1384700 | 0.800199 | 1.611774e-48 | -8.615850e-47 |
| Msa1254910 | Msa1384700 | 0.812581 | 3.944166e-51 | -8.615850e-47 |
| Msa1255210 | Msa1384700 | 0.831945 | 1.251477e-55 | -8.615850e-47 |
| Msa1256490 | Msa1384700 | -0.809313 | 2.012513e-50 | -8.615850e-47 |
| Msa1263110 | Msa1384700 | 0.819323 | 1.233360e-52 | -8.615850e-47 |
| Msa1268360 | Msa1384700 | 0.826514 | 2.602566e-54 | -8.615850e-47 |
| Msa1268390 | Msa1384700 | 0.837171 | 6.082156e-57 | -8.615850e-47 |
| Msa1268420 | Msa1384700 | 0.821560 | 3.783265e-53 | -8.615850e-47 |
| Msa1269200 | Msa1384700 | 0.829131 | 6.112291e-55 | -8.615850e-47 |
| Msa1284020 | Msa1384700 | 0.837591 | 4.750154e-57 | -8.615850e-47 |
| Msa1289090 | Msa1384700 | 0.803164 | 3.972246e-49 | -8.615850e-47 |
| Msa1295650 | Msa1384700 | 0.825771 | 3.908698e-54 | -8.615850e-47 |
| Msa1296810 | Msa1384700 | -0.802811 | 4.700152e-49 | -8.615850e-47 |
| Msa1301280 | Msa1384700 | -0.810136 | 1.339450e-50 | -8.615850e-47 |
| Msa1322500 | Msa1384700 | 0.804517 | 2.079296e-49 | -8.615850e-47 |
| Msa1323070 | Msa1384700 | 0.822285 | 2.571284e-53 | -8.615850e-47 |
| Msa1331570 | Msa1384700 | -0.871722 | 5.504019e-67 | -8.615850e-47 |
| Msa1333220 | Msa1384700 | -0.823522 | 1.323579e-53 | -8.615850e-47 |
| Msa1336020 | Msa1384700 | 0.800592 | 1.340436e-48 | -8.615850e-47 |
| Msa1343600 | Msa1384700 | 0.840124 | 1.050421e-57 | -8.615850e-47 |
| Msa1343980 | Msa1384700 | 0.823909 | 1.074480e-53 | -8.615850e-47 |
| Msa0366230 | Msa1384700 | 0.803876 | 2.827597e-49 | -8.615850e-47 |
| Msa0384590 | Msa1384700 | 0.819029 | 1.439515e-52 | -8.615850e-47 |
| Msa0388210 | Msa1384700 | 0.810364 | 1.196092e-50 | -8.615850e-47 |
| Msa0397130 | Msa1384700 | 0.813920 | 2.004497e-51 | -8.615850e-47 |
| Msa0405200 | Msa1384700 | 0.802385 | 5.753180e-49 | -8.615850e-47 |
| Msa0405470 | Msa1384700 | -0.804299 | 2.308814e-49 | -8.615850e-47 |
| Msa0405550 | Msa1384700 | -0.802255 | 6.118146e-49 | -8.615850e-47 |
| Msa0412580 | Msa1384700 | -0.816184 | 6.303712e-52 | -8.615850e-47 |
| Msa0434660 | Msa1384700 | 0.809494 | 1.840524e-50 | -8.615850e-47 |
| Msa0437440 | Msa1384700 | -0.813903 | 2.022518e-51 | -8.615850e-47 |
| Msa0444380 | Msa1384700 | 0.804157 | 2.471618e-49 | -8.615850e-47 |
| Msa0449500 | Msa1384700 | 0.800850 | 1.187884e-48 | -8.615850e-47 |
| Msa0480900 | Msa1384700 | -0.844334 | 8.064458e-59 | -8.615850e-47 |
| Msa0481630 | Msa1384700 | 0.839166 | 1.864058e-57 | -8.615850e-47 |
| Msa1001120 | Msa1384700 | 0.833972 | 3.922037e-56 | -8.615850e-47 |
| Msa1001930 | Msa1384700 | -0.803314 | 3.697714e-49 | -8.615850e-47 |
| Msa1011140 | Msa1384700 | -0.810909 | 9.117713e-51 | -8.615850e-47 |
| Msa1015360 | Msa1384700 | 0.832143 | 1.118082e-55 | -8.615850e-47 |
| Msa1019420 | Msa1384700 | 0.822711 | 2.047205e-53 | -8.615850e-47 |
| Msa1022420 | Msa1384700 | 0.800962 | 1.126586e-48 | -8.615850e-47 |
| Msa1027340 | Msa1384700 | 0.817355 | 3.441795e-52 | -8.615850e-47 |
| Msa1027400 | Msa1384700 | 0.817168 | 3.792359e-52 | -8.615850e-47 |
| Msa1029820 | Msa1384700 | 0.801383 | 9.239954e-49 | -8.615850e-47 |
| Msa1029860 | Msa1384700 | 0.814877 | 1.231465e-51 | -8.615850e-47 |
| Msa1034950 | Msa1384700 | 0.833625 | 4.789978e-56 | -8.615850e-47 |
| Msa1035050 | Msa1384700 | 0.806470 | 8.097315e-50 | -8.615850e-47 |
| Msa1039440 | Msa1384700 | -0.826011 | 3.427745e-54 | -8.615850e-47 |
| Msa1044250 | Msa1384700 | 0.823428 | 1.392632e-53 | -8.615850e-47 |
| Msa1056890 | Msa1384700 | 0.837291 | 5.669991e-57 | -8.615850e-47 |
| Msa1075010 | Msa1384700 | 0.833672 | 4.662265e-56 | -8.615850e-47 |
| Msa1075090 | Msa1384700 | 0.830488 | 2.854712e-55 | -8.615850e-47 |
| Msa1077970 | Msa1384700 | 0.824131 | 9.530013e-54 | -8.615850e-47 |
| Msa1088400 | Msa1384700 | -0.804036 | 2.619209e-49 | -8.615850e-47 |
| Msa1089990 | Msa1384700 | 0.800641 | 1.310155e-48 | -8.615850e-47 |
| Msa1092310 | Msa1384700 | 0.867831 | 1.023665e-65 | -8.615850e-47 |
| Msa1094810 | Msa1384700 | 0.846958 | 1.566243e-59 | -8.615850e-47 |
| Msa1103450 | Msa1384700 | 0.801006 | 1.103903e-48 | -8.615850e-47 |
| Msa1106590 | Msa1384700 | 0.809990 | 1.439871e-50 | -8.615850e-47 |
| Msa0241750 | Msa1384700 | 0.812608 | 3.890939e-51 | -8.615850e-47 |
| Msa0242720 | Msa1384700 | 0.838855 | 2.243757e-57 | -8.615850e-47 |
| Msa0249370 | Msa1384700 | 0.804787 | 1.826749e-49 | -8.615850e-47 |
| Msa0256920 | Msa1384700 | 0.849633 | 2.852079e-60 | -8.615850e-47 |
| Msa0265650 | Msa1384700 | 0.850437 | 1.698959e-60 | -8.615850e-47 |
| Msa0267510 | Msa1384700 | -0.802267 | 6.085364e-49 | -8.615850e-47 |
| Msa0271700 | Msa1384700 | 0.807654 | 4.547747e-50 | -8.615850e-47 |
| Msa0271720 | Msa1384700 | 0.817895 | 2.601466e-52 | -8.615850e-47 |
| Msa0279810 | Msa1384700 | 0.811978 | 5.341601e-51 | -8.615850e-47 |
| Msa0282830 | Msa1384700 | 0.807715 | 4.414174e-50 | -8.615850e-47 |
| Msa0282960 | Msa1384700 | 0.853495 | 2.301728e-61 | -8.615850e-47 |
| Msa0285890 | Msa1384700 | 0.813808 | 2.122140e-51 | -8.615850e-47 |
| Msa0287480 | Msa1384700 | 0.809750 | 1.621877e-50 | -8.615850e-47 |
| Msa0297340 | Msa1384700 | 0.809201 | 2.126750e-50 | -8.615850e-47 |
| Msa0303900 | Msa1384700 | 0.821423 | 4.069411e-53 | -8.615850e-47 |
| Msa0307740 | Msa1384700 | 0.819009 | 1.454051e-52 | -8.615850e-47 |
| Msa0313900 | Msa1384700 | 0.800546 | 1.369801e-48 | -8.615850e-47 |
| Msa0316740 | Msa1384700 | 0.804091 | 2.550786e-49 | -8.615850e-47 |
| Msa0318490 | Msa1384700 | 0.825509 | 4.510606e-54 | -8.615850e-47 |
| Msa0319220 | Msa1384700 | 0.803933 | 2.751463e-49 | -8.615850e-47 |
| Msa0320170 | Msa1384700 | 0.853368 | 2.503122e-61 | -8.615850e-47 |
| Msa0324810 | Msa1384700 | 0.803511 | 3.366628e-49 | -8.615850e-47 |
| Msa0333770 | Msa1384700 | 0.816969 | 4.204711e-52 | -8.615850e-47 |
| Msa0334630 | Msa1384700 | 0.814300 | 1.652686e-51 | -8.615850e-47 |
| Msa0345050 | Msa1384700 | 0.828226 | 1.011095e-54 | -8.615850e-47 |
| Msa0345890 | Msa1384700 | 0.828132 | 1.065412e-54 | -8.615850e-47 |
| Msa0355080 | Msa1384700 | -0.826870 | 2.139836e-54 | -8.615850e-47 |
| Msa0356270 | Msa1384700 | 0.816918 | 4.316473e-52 | -8.615850e-47 |
| Msa0358470 | Msa1384700 | 0.803002 | 4.291011e-49 | -8.615850e-47 |
| Msa1107220 | Msa1384700 | 0.812702 | 3.711175e-51 | -8.615850e-47 |
| Msa1108560 | Msa1384700 | 0.801956 | 7.048322e-49 | -8.615850e-47 |
| Msa1110900 | Msa1384700 | 0.808801 | 2.591342e-50 | -8.615850e-47 |
| Msa1115980 | Msa1384700 | 0.828561 | 8.393876e-55 | -8.615850e-47 |
| Msa1129330 | Msa1384700 | 0.821410 | 4.097509e-53 | -8.615850e-47 |
| Msa1131120 | Msa1384700 | 0.802374 | 5.784142e-49 | -8.615850e-47 |
| Msa1133750 | Msa1384700 | 0.811683 | 6.191569e-51 | -8.615850e-47 |
| Msa1146980 | Msa1384700 | 0.808984 | 2.366841e-50 | -8.615850e-47 |
| Msa1147010 | Msa1384700 | 0.814541 | 1.461763e-51 | -8.615850e-47 |
| Msa1154060 | Msa1384700 | 0.805474 | 1.311999e-49 | -8.615850e-47 |
| Msa1154320 | Msa1384700 | 0.822129 | 2.793499e-53 | -8.615850e-47 |
| Msa1154570 | Msa1384700 | 0.818460 | 1.937568e-52 | -8.615850e-47 |
| Msa1156720 | Msa1384700 | 0.800805 | 1.212791e-48 | -8.615850e-47 |
| Msa1156740 | Msa1384700 | 0.807688 | 4.474154e-50 | -8.615850e-47 |
| Msa1165460 | Msa1384700 | 0.811435 | 7.012927e-51 | -8.615850e-47 |
| Msa1167310 | Msa1384700 | 0.800845 | 1.190667e-48 | -8.615850e-47 |
| Msa1184680 | Msa1384700 | 0.842214 | 2.964568e-58 | -8.615850e-47 |
| Msa1191530 | Msa1384700 | -0.810017 | 1.420626e-50 | -8.615850e-47 |
| Msa1193940 | Msa1384700 | 0.807177 | 5.739966e-50 | -8.615850e-47 |
| Msa1197720 | Msa1384700 | 0.821035 | 5.000247e-53 | -8.615850e-47 |
| Msa1199540 | Msa1384700 | -0.803552 | 3.300683e-49 | -8.615850e-47 |
| Msa1202110 | Msa1384700 | 0.802433 | 5.622248e-49 | -8.615850e-47 |
| Msa1202800 | Msa1384700 | 0.844240 | 8.545797e-59 | -8.615850e-47 |
| Msa1203650 | Msa1384700 | 0.836269 | 1.033193e-56 | -8.615850e-47 |
| Msa1204870 | Msa1384700 | -0.805634 | 1.214123e-49 | -8.615850e-47 |
| Msa1204900 | Msa1384700 | -0.808814 | 2.573624e-50 | -8.615850e-47 |
| Msa1207920 | Msa1384700 | -0.842752 | 2.134554e-58 | -8.615850e-47 |
| Msa1212830 | Msa1384700 | 0.817298 | 3.545536e-52 | -8.615850e-47 |
| Msa1215540 | Msa1384700 | -0.800248 | 1.575760e-48 | -8.615850e-47 |
| Msa1219530 | Msa1384700 | -0.809029 | 2.315967e-50 | -8.615850e-47 |
| Msa1221270 | Msa1384700 | 0.824658 | 7.164399e-54 | -8.615850e-47 |
| Msa1223710 | Msa1384700 | 0.822676 | 2.085440e-53 | -8.615850e-47 |
| Msa1223960 | Msa1384700 | 0.800700 | 1.274566e-48 | -8.615850e-47 |
| Msa1223990 | Msa1384700 | 0.816818 | 4.546015e-52 | -8.615850e-47 |
| Msa0484280 | Msa1384700 | 0.800509 | 1.394156e-48 | -8.615850e-47 |
| Msa0490100 | Msa1384700 | 0.848004 | 8.078572e-60 | -8.615850e-47 |
| Msa0490320 | Msa1384700 | 0.800491 | 1.405610e-48 | -8.615850e-47 |
| Msa0501080 | Msa1384700 | 0.807721 | 4.400765e-50 | -8.615850e-47 |
| Msa0521610 | Msa1384700 | 0.802130 | 6.490462e-49 | -8.615850e-47 |
| Msa0522540 | Msa1384700 | 0.813575 | 2.388536e-51 | -8.615850e-47 |
| Msa0529110 | Msa1384700 | 0.819193 | 1.320831e-52 | -8.615850e-47 |
| Msa0531050 | Msa1384700 | 0.810044 | 1.401948e-50 | -8.615850e-47 |
| Msa0544490 | Msa1384700 | 0.806797 | 6.908819e-50 | -8.615850e-47 |
| Msa0548410 | Msa1384700 | 0.806522 | 7.895080e-50 | -8.615850e-47 |
| Msa0548420 | Msa1384700 | 0.825209 | 5.311567e-54 | -8.615850e-47 |
| Msa0557240 | Msa1384700 | 0.808009 | 3.823267e-50 | -8.615850e-47 |
| Msa0561830 | Msa1384700 | 0.801860 | 7.376889e-49 | -8.615850e-47 |
| Msa0565370 | Msa1384700 | -0.822139 | 2.779062e-53 | -8.615850e-47 |
| Msa0565430 | Msa1384700 | -0.809705 | 1.658200e-50 | -8.615850e-47 |
| Msa0565700 | Msa1384700 | 0.805038 | 1.618925e-49 | -8.615850e-47 |
| Msa0566280 | Msa1384700 | 0.835007 | 2.155489e-56 | -8.615850e-47 |
| Msa0567330 | Msa1384700 | 0.826889 | 2.117453e-54 | -8.615850e-47 |
| Msa0567570 | Msa1384700 | 0.802865 | 4.580650e-49 | -8.615850e-47 |
| Msa0576320 | Msa1384700 | 0.811841 | 5.721922e-51 | -8.615850e-47 |
| Msa0579080 | Msa1384700 | 0.835827 | 1.337414e-56 | -8.615850e-47 |
| Msa0579160 | Msa1384700 | 0.849934 | 2.349994e-60 | -8.615850e-47 |
| Msa0579220 | Msa1384700 | 0.851210 | 1.029234e-60 | -8.615850e-47 |
| Msa0581350 | Msa1384700 | 0.806692 | 7.269426e-50 | -8.615850e-47 |
| Msa0588040 | Msa1384700 | 0.827308 | 1.681039e-54 | -8.615850e-47 |
| Msa0590620 | Msa1384700 | -0.854239 | 1.404886e-61 | -8.615850e-47 |
| Msa0595270 | Msa1384700 | 0.806761 | 7.029351e-50 | -8.615850e-47 |
| Msa0597370 | Msa1384700 | -0.810309 | 1.228712e-50 | -8.615850e-47 |
| Msa0597820 | Msa1384700 | 0.802677 | 5.007896e-49 | -8.615850e-47 |
| Msa0842750 | Msa1384700 | 0.813526 | 2.447646e-51 | -8.615850e-47 |
| Msa0850640 | Msa1384700 | 0.810219 | 1.284942e-50 | -8.615850e-47 |
| Msa0862480 | Msa1384700 | -0.860259 | 2.339036e-63 | -8.615850e-47 |
| Msa0869930 | Msa1384700 | 0.806529 | 7.868899e-50 | -8.615850e-47 |
| Msa0901270 | Msa1384700 | 0.815778 | 7.765674e-52 | -8.615850e-47 |
| Msa0905570 | Msa1384700 | 0.811477 | 6.864008e-51 | -8.615850e-47 |
| Msa0907880 | Msa1384700 | 0.808958 | 2.398242e-50 | -8.615850e-47 |
| Msa0910170 | Msa1384700 | 0.800079 | 1.704900e-48 | -8.615850e-47 |
| Msa0935840 | Msa1384700 | -0.801027 | 1.092685e-48 | -8.615850e-47 |
| Msa0940910 | Msa1384700 | 0.835405 | 1.710185e-56 | -8.615850e-47 |
| Msa0959290 | Msa1384700 | -0.800260 | 1.566488e-48 | -8.615850e-47 |
| Msa0964020 | Msa1384700 | 0.825467 | 4.614011e-54 | -8.615850e-47 |
| Msa0967780 | Msa1384700 | 0.809643 | 1.709387e-50 | -8.615850e-47 |
| Msa0973080 | Msa1384700 | -0.829298 | 5.567107e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384700 | MtrunA17_Chr1g0154701 | 98.131 | 428 | 8 | 0 | 1 | 428 | 1 | 428 | 0.0 | 874 |
| Msa1384700 | MtrunA17_Chr4g0034611 | 73.409 | 440 | 101 | 3 | 1 | 428 | 1 | 436 | 0.0 | 679 |
| Msa1384700 | MtrunA17_Chr4g0034621 | 69.767 | 430 | 123 | 2 | 5 | 427 | 7 | 436 | 0.0 | 618 |
| Msa1384700 | MtrunA17_Chr4g0034641 | 65.581 | 430 | 136 | 3 | 5 | 427 | 7 | 431 | 0.0 | 586 |
| Msa1384700 | MtrunA17_Chr4g0034661 | 68.545 | 426 | 119 | 5 | 5 | 427 | 7 | 420 | 0.0 | 583 |
| Msa1384700 | MtrunA17_Chr4g0034651 | 64.896 | 433 | 130 | 3 | 5 | 427 | 40 | 460 | 0.0 | 578 |
| Msa1384700 | MtrunA17_Chr4g0034631 | 64.651 | 430 | 138 | 3 | 5 | 427 | 7 | 429 | 0.0 | 568 |
| Msa1384700 | MtrunA17_Chr5g0408171 | 27.805 | 205 | 131 | 6 | 145 | 344 | 103 | 295 | 9.40e-14 | 73.2 |
| Msa1384700 | MtrunA17_Chr8g0367951 | 33.929 | 112 | 68 | 3 | 157 | 263 | 391 | 501 | 9.35e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384700 | AT1G19360.1 | 70.276 | 434 | 117 | 3 | 1 | 428 | 1 | 428 | 0.0 | 641 |
| Msa1384700 | AT1G19360.2 | 70.276 | 434 | 117 | 3 | 1 | 428 | 1 | 428 | 0.0 | 641 |
| Msa1384700 | AT1G75110.1 | 68.736 | 435 | 122 | 4 | 1 | 428 | 1 | 428 | 0.0 | 626 |
| Msa1384700 | AT1G75120.1 | 61.631 | 417 | 141 | 2 | 11 | 427 | 5 | 402 | 0.0 | 532 |
| Msa1384700 | AT2G35610.1 | 25.120 | 418 | 238 | 17 | 3 | 398 | 8 | 372 | 1.05e-12 | 70.5 |
Find 107 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCTTTGATGAACCTAAAA+TGG | 0.118559 | tig0020679:-4821 | Msa1384700:CDS |
| TGTTGTTTGAGTTGACTTTA+AGG | 0.186128 | tig0020679:-6773 | Msa1384700:five_prime_UTR |
| AGTTGGCATATCTAATTATT+TGG | 0.214194 | tig0020679:-5136 | Msa1384700:CDS |
| TATGCCAACTTTCTTGATAT+TGG | 0.231969 | tig0020679:+5149 | None:intergenic |
| CCCCTTTGATTATATTTATA+GGG | 0.245145 | tig0020679:-4905 | Msa1384700:CDS |
| TTCATCCTTGCAAGTTTATC+AGG | 0.257490 | tig0020679:+4484 | None:intergenic |
| ACCCCTTTGATTATATTTAT+AGG | 0.264534 | tig0020679:-4906 | Msa1384700:CDS |
| CATAGCAATCATACAGCTTA+TGG | 0.265461 | tig0020679:-4853 | Msa1384700:CDS |
| TAAAGAGGTCGTTGTTGTTC+TGG | 0.289152 | tig0020679:-5211 | Msa1384700:CDS |
| CTTAGCTAATTAATCTTACT+TGG | 0.292242 | tig0020679:-4130 | Msa1384700:three_prime_UTR |
| ATGCTCATACCATGAGAATA+TGG | 0.294158 | tig0020679:-4786 | Msa1384700:CDS |
| GAACCTTACTGTTCATAAAA+AGG | 0.300928 | tig0020679:+4578 | None:intergenic |
| AAACACAAGGCTGGTCCTTT+TGG | 0.309663 | tig0020679:-5327 | Msa1384700:CDS |
| TTCAACGCATTAACTTGTTC+TGG | 0.347234 | tig0020679:+5480 | None:intergenic |
| AATTAATCTTACTTGGATCT+TGG | 0.358924 | tig0020679:-4123 | Msa1384700:three_prime_UTR |
| TTCTCAGAGTCGTGTTCAAC+TGG | 0.361961 | tig0020679:+6824 | None:intergenic |
| AGCTCAATTGAAGGAATTGT+TGG | 0.375607 | tig0020679:+4733 | None:intergenic |
| TATCAAAATCGAAATCAATA+TGG | 0.388493 | tig0020679:-4386 | Msa1384700:three_prime_UTR |
| GGTGGGAATCATGCTGTCTC+TGG | 0.396405 | tig0020679:-5012 | Msa1384700:CDS |
| CCTTCACATCCTGGTTATGA+TGG | 0.408046 | tig0020679:-4634 | Msa1384700:CDS |
| TCCGAGATGCGGTGATTGAA+TGG | 0.416396 | tig0020679:+6681 | None:intergenic |
| CCCTAGATTGGCAAAACTCT+TGG | 0.417448 | tig0020679:-5250 | Msa1384700:CDS |
| TTCCACTCTACTACAACAAT+TGG | 0.419689 | tig0020679:+4329 | None:intergenic |
| TGATGAACCTAAAATGGGTT+GGG | 0.421735 | tig0020679:-4815 | Msa1384700:CDS |
| AAGAAGAACGCCGATGAAAA+CGG | 0.426281 | tig0020679:+6649 | None:intergenic |
| TTCTGTTATTCCCGATGAAT+CGG | 0.434960 | tig0020679:-5277 | Msa1384700:CDS |
| TAATGTGTTGGAGATGTTAC+AGG | 0.437641 | tig0020679:-5181 | Msa1384700:CDS |
| CCCCGATGGTTCTGATTAGT+AGG | 0.441819 | tig0020679:-4410 | Msa1384700:exon |
| TCCCTATAAATATAATCAAA+GGG | 0.442068 | tig0020679:+4904 | None:intergenic |
| ACCAACCTTGTGGCTGAGAA+TGG | 0.457117 | tig0020679:+6565 | None:intergenic |
| GAATTCTGAGCTGAAGAAGC+AGG | 0.473704 | tig0020679:-5430 | Msa1384700:CDS |
| TCTAATGGAGAAGCTGCGTT+TGG | 0.475422 | tig0020679:-5400 | Msa1384700:CDS |
| ATCCCTATAAATATAATCAA+AGG | 0.485270 | tig0020679:+4903 | None:intergenic |
| GAAGCAGGTGAAAGGTCTAA+TGG | 0.486719 | tig0020679:-5415 | Msa1384700:CDS |
| TGAATCGGTGAACCCTAGAT+TGG | 0.487843 | tig0020679:-5262 | Msa1384700:CDS |
| CGATCTAAAAGCTCAATTGA+AGG | 0.489088 | tig0020679:+4724 | None:intergenic |
| ATTGAATCAACACCTTGATC+CGG | 0.489958 | tig0020679:+5045 | None:intergenic |
| TAGTTGAGTTCTATGTCAAC+GGG | 0.490164 | tig0020679:-4456 | Msa1384700:CDS |
| GGAAATTGCTATTTATAAAG+AGG | 0.490420 | tig0020679:-5226 | Msa1384700:CDS |
| GTTGATTCAATTGCCAAGTC+GGG | 0.491275 | tig0020679:-5033 | Msa1384700:CDS |
| ACGGAACAGTTTGTTGTGCT+TGG | 0.491386 | tig0020679:-5354 | Msa1384700:CDS |
| AATGGAGAAGCTGCGTTTGG+CGG | 0.496977 | tig0020679:-5397 | Msa1384700:CDS |
| TTGATGAACCTAAAATGGGT+TGG | 0.498626 | tig0020679:-4816 | Msa1384700:CDS |
| TGCTCATACCATGAGAATAT+GGG | 0.499575 | tig0020679:-4785 | Msa1384700:CDS |
| TCCTACTAATCAGAACCATC+GGG | 0.500121 | tig0020679:+4409 | None:intergenic |
| TCTAGGGTTCACCGATTCAT+CGG | 0.501111 | tig0020679:+5266 | None:intergenic |
| CTAGGGTTCACCGATTCATC+GGG | 0.503259 | tig0020679:+5267 | None:intergenic |
| AGAATATGGGTATATAACTC+TGG | 0.505845 | tig0020679:-4772 | Msa1384700:CDS |
| TTGAGAGAGTTTCTGCAACT+AGG | 0.508202 | tig0020679:-4973 | Msa1384700:CDS |
| TTCACCAATATCAAGAAAGT+TGG | 0.508424 | tig0020679:-5153 | Msa1384700:CDS |
| AACAACAACAACACAACCAC+TGG | 0.509584 | tig0020679:+6792 | None:intergenic |
| GGCTTTCTAAAGAGAAAGCA+TGG | 0.511884 | tig0020679:-4690 | Msa1384700:CDS |
| AGGTTACAGCGTTCTCCTCT+CGG | 0.515400 | tig0020679:-4953 | Msa1384700:CDS |
| CACTCTACTACAACAATTGG+AGG | 0.517175 | tig0020679:+4332 | None:intergenic |
| GTCTTTGATGAACCTAAAAT+GGG | 0.519326 | tig0020679:-4820 | Msa1384700:CDS |
| GCTGTTTATCAAATTTCGAT+CGG | 0.522069 | tig0020679:+6746 | None:intergenic |
| ATCCTACTAATCAGAACCAT+CGG | 0.522896 | tig0020679:+4408 | None:intergenic |
| TATAGAAGAGACCCGGATCA+AGG | 0.525636 | tig0020679:-5057 | Msa1384700:CDS |
| AGCATGATTCCCACCCGACT+TGG | 0.527468 | tig0020679:+5020 | None:intergenic |
| GCGTTTGGCGGAGCAAGGAA+AGG | 0.528394 | tig0020679:-5385 | Msa1384700:CDS |
| TAGATTGGCAAAACTCTTGG+CGG | 0.530183 | tig0020679:-5247 | Msa1384700:CDS |
| TCCGGGTCTCTTCTATAGAC+AGG | 0.531058 | tig0020679:+5063 | None:intergenic |
| CAGAGTCGTGTTCAACTGGA+TGG | 0.532666 | tig0020679:+6828 | None:intergenic |
| GATTCAATTGCCAAGTCGGG+TGG | 0.535736 | tig0020679:-5030 | Msa1384700:CDS |
| TTGAATCAACACCTTGATCC+GGG | 0.540173 | tig0020679:+5046 | None:intergenic |
| TGTTGATTCAATTGCCAAGT+CGG | 0.547442 | tig0020679:-5034 | Msa1384700:CDS |
| AAGCTGCGTTTGGCGGAGCA+AGG | 0.554092 | tig0020679:-5390 | Msa1384700:CDS |
| CTCCAATTGTTGTAGTAGAG+TGG | 0.556926 | tig0020679:-4331 | Msa1384700:three_prime_UTR |
| CCATCATAACCAGGATGTGA+AGG | 0.557644 | tig0020679:+4634 | None:intergenic |
| GTAGTTGAGTTCTATGTCAA+CGG | 0.558544 | tig0020679:-4457 | Msa1384700:CDS |
| ATTTGATAAACAGCAATGGC+AGG | 0.559173 | tig0020679:-6737 | Msa1384700:exon |
| TCTGGCTAACACTAATGTGT+TGG | 0.561756 | tig0020679:-5193 | Msa1384700:CDS |
| AGAGCCTTGACAGTGCCAAA+AGG | 0.564867 | tig0020679:+5312 | None:intergenic |
| ACCATTCAATCACCGCATCT+CGG | 0.566295 | tig0020679:-6682 | Msa1384700:CDS |
| GAGCTGAAGAAGCAGGTGAA+AGG | 0.566632 | tig0020679:-5423 | Msa1384700:CDS |
| TATTTATAGGGATTCAGATG+TGG | 0.569522 | tig0020679:-4893 | Msa1384700:CDS |
| TGTTGGAGATGTTACAGGTA+TGG | 0.571269 | tig0020679:-5176 | Msa1384700:CDS |
| CGTTTGGCGGAGCAAGGAAA+GGG | 0.575655 | tig0020679:-5384 | Msa1384700:CDS |
| GTTATATACCCATATTCTCA+TGG | 0.587662 | tig0020679:+4777 | None:intergenic |
| CGAAATTTGATAAACAGCAA+TGG | 0.589731 | tig0020679:-6741 | Msa1384700:exon |
| TAGTTAACATGTACAATCAC+AGG | 0.592948 | tig0020679:+4511 | None:intergenic |
| GCAAGGAAAGGGTCATGCTA+CGG | 0.593930 | tig0020679:-5373 | Msa1384700:CDS |
| ATCATCCTGATAAACTTGCA+AGG | 0.604744 | tig0020679:-4489 | Msa1384700:CDS |
| CATCATAACCAGGATGTGAA+GGG | 0.619342 | tig0020679:+4635 | None:intergenic |
| ATTCAATTGCCAAGTCGGGT+GGG | 0.620463 | tig0020679:-5029 | Msa1384700:CDS |
| TCCTGTCTATAGAAGAGACC+CGG | 0.625262 | tig0020679:-5064 | Msa1384700:CDS |
| GATTCATCGGGAATAACAGA+AGG | 0.626071 | tig0020679:+5279 | None:intergenic |
| GCGCTCGACAGTTTCCCCGA+TGG | 0.627821 | tig0020679:-4424 | Msa1384700:CDS |
| GCATGAAGTCCATCATAACC+AGG | 0.631266 | tig0020679:+4625 | None:intergenic |
| CCCTATAAATATAATCAAAG+GGG | 0.636439 | tig0020679:+4905 | None:intergenic |
| TTTCTCTTTAGAAAGCCGAT+CGG | 0.638101 | tig0020679:+4696 | None:intergenic |
| TCATGCTGCAAAGAGAACAA+TGG | 0.639030 | tig0020679:-4608 | Msa1384700:CDS |
| GATGTGGAGTCAATGTCAGA+TGG | 0.642589 | tig0020679:-4877 | Msa1384700:CDS |
| GGCAACGGCGATCCGAGATG+CGG | 0.643444 | tig0020679:+6670 | None:intergenic |
| AACGCCGATGAAAACGGCAA+CGG | 0.643805 | tig0020679:+6655 | None:intergenic |
| CTGAGAAACAACGACTCCAG+TGG | 0.651857 | tig0020679:-6808 | Msa1384700:five_prime_UTR |
| CTTGGTGAGAAACACAAGGC+TGG | 0.654456 | tig0020679:-5336 | Msa1384700:CDS |
| AGTCGTGTTCAACTGGATGG+AGG | 0.665586 | tig0020679:+6831 | None:intergenic |
| GCTTTCTAAAGAGAAAGCAT+GGG | 0.666613 | tig0020679:-4689 | Msa1384700:CDS |
| GAGAATGGTCTGAGTTGATG+CGG | 0.670394 | tig0020679:+6580 | None:intergenic |
| TCAGACCATTCTCAGCCACA+AGG | 0.680327 | tig0020679:-6570 | Msa1384700:intron |
| AGAAGAGACAGACATAAATG+TGG | 0.681031 | tig0020679:-6927 | Msa1384700:five_prime_UTR |
| AATGGTCTGAGTTGATGCGG+TGG | 0.700511 | tig0020679:+6583 | None:intergenic |
| ACACAATATCGACATCCGAG+AGG | 0.744525 | tig0020679:+4938 | None:intergenic |
| CCTACTAATCAGAACCATCG+GGG | 0.749180 | tig0020679:+4410 | None:intergenic |
| TGTGCTTGGTGAGAAACACA+AGG | 0.756567 | tig0020679:-5340 | Msa1384700:CDS |
| GTGGAAATGAAGAAACCGTG+TGG | 0.802724 | tig0020679:+6602 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAACTTGTTTATCAAAATA+TGG | - | tig0020679:4773-4792 | Msa1384700:CDS | 15.0% |
| !!! | AAAATTTTGAACAAAAATAG+AGG | + | tig0020679:4845-4864 | None:intergenic | 15.0% |
| !!! | AATAATGTGGATTATATTAA+TGG | - | tig0020679:5180-5199 | Msa1384700:CDS | 15.0% |
| !!! | TAATGGATTTTATATACTTT+AGG | - | tig0020679:5197-5216 | Msa1384700:CDS | 15.0% |
| !!! | AATGGATTTTATATACTTTA+GGG | - | tig0020679:5198-5217 | Msa1384700:CDS | 15.0% |
| !!! | ATACAAAATACAAATCTTTT+TGG | + | tig0020679:6694-6713 | None:intergenic | 15.0% |
| !!! | ACAAATTTTCACATACATTA+GGG | + | tig0020679:5139-5158 | None:intergenic | 20.0% |
| !! | TCCCTATAAATATAATCAAA+GGG | + | tig0020679:6145-6164 | None:intergenic | 20.0% |
| !! | ATCCCTATAAATATAATCAA+AGG | + | tig0020679:6146-6165 | None:intergenic | 20.0% |
| !! | TATCAAAATCGAAATCAATA+TGG | - | tig0020679:6660-6679 | Msa1384700:CDS | 20.0% |
| ! | TATATCTGCTTCTTCAATTT+AGG | - | tig0020679:4511-4530 | Msa1384700:CDS | 25.0% |
| ! | ATACTCTTAAAGTAGAAAGA+AGG | + | tig0020679:4563-4582 | None:intergenic | 25.0% |
| !! | TTCTACTTTAAGAGTATGTT+TGG | - | tig0020679:4566-4585 | Msa1384700:CDS | 25.0% |
| ! | GGTCTAATATTTACAAAACT+TGG | - | tig0020679:4794-4813 | Msa1384700:CDS | 25.0% |
| ! | AAGTTAGCCATTCAATTTAT+GGG | - | tig0020679:4880-4899 | Msa1384700:CDS | 25.0% |
| ! | TACTTTACCCATAAATTGAA+TGG | + | tig0020679:4890-4909 | None:intergenic | 25.0% |
| ! | TAGCAAATCATATAATGCAT+CGG | - | tig0020679:5041-5060 | Msa1384700:CDS | 25.0% |
| ! | ATACTTCAGAACTAAATTGA+TGG | + | tig0020679:5073-5092 | None:intergenic | 25.0% |
| !! | GACAAATTTTCACATACATT+AGG | + | tig0020679:5140-5159 | None:intergenic | 25.0% |
| ! | ATGTTATTAAGATGTGGTAA+GGG | + | tig0020679:5258-5277 | None:intergenic | 25.0% |
| ! | TAATCCATGTTATTAAGATG+TGG | + | tig0020679:5264-5283 | None:intergenic | 25.0% |
| !! | CATCTTAATAACATGGATTA+AGG | - | tig0020679:5264-5283 | Msa1384700:CDS | 25.0% |
| !!! | GGAAATTGCTATTTATAAAG+AGG | - | tig0020679:5820-5839 | Msa1384700:intron | 25.0% |
| ! | AGTTGGCATATCTAATTATT+TGG | - | tig0020679:5910-5929 | Msa1384700:intron | 25.0% |
| ! | ACCCCTTTGATTATATTTAT+AGG | - | tig0020679:6140-6159 | Msa1384700:intron | 25.0% |
| ! | CCCTATAAATATAATCAAAG+GGG | + | tig0020679:6144-6163 | None:intergenic | 25.0% |
| ! | CCCCTTTGATTATATTTATA+GGG | - | tig0020679:6141-6160 | Msa1384700:intron | 25.0% |
| !!! | TTTTATTTATCTCTCAGGAT+CGG | - | tig0020679:6745-6764 | Msa1384700:five_prime_UTR | 25.0% |
| ! | CTTAGCTAATTAATCTTACT+TGG | - | tig0020679:6916-6935 | Msa1384700:five_prime_UTR | 25.0% |
| ! | AATTAATCTTACTTGGATCT+TGG | - | tig0020679:6923-6942 | Msa1384700:five_prime_UTR | 25.0% |
| !! | TGTTGTTTGAGTTGACTTTA+AGG | - | tig0020679:4273-4292 | Msa1384700:three_prime_UTR | 30.0% |
| GCTGTTTATCAAATTTCGAT+CGG | + | tig0020679:4303-4322 | None:intergenic | 30.0% | |
| CGAAATTTGATAAACAGCAA+TGG | - | tig0020679:4305-4324 | Msa1384700:three_prime_UTR | 30.0% | |
| GTAACTGCTATAACATCATT+AGG | - | tig0020679:4816-4835 | Msa1384700:CDS | 30.0% | |
| GAAGTTAGCCATTCAATTTA+TGG | - | tig0020679:4879-4898 | Msa1384700:CDS | 30.0% | |
| !! | TAGTTCTGAACTAATCACAA+TGG | - | tig0020679:5003-5022 | Msa1384700:CDS | 30.0% |
| TCCACATTATTAAGATGTCA+GGG | + | tig0020679:5171-5190 | None:intergenic | 30.0% | |
| ATCCACATTATTAAGATGTC+AGG | + | tig0020679:5172-5191 | None:intergenic | 30.0% | |
| TAGGGACTACTTATATACTT+AGG | - | tig0020679:5216-5235 | Msa1384700:CDS | 30.0% | |
| CATGTTATTAAGATGTGGTA+AGG | + | tig0020679:5259-5278 | None:intergenic | 30.0% | |
| CTTACCACATCTTAATAACA+TGG | - | tig0020679:5257-5276 | Msa1384700:CDS | 30.0% | |
| TGGATTAAGGAACTCAATAT+AGG | - | tig0020679:5277-5296 | Msa1384700:CDS | 30.0% | |
| CATGTTAAGGATATCAAAAG+TGG | + | tig0020679:5373-5392 | None:intergenic | 30.0% | |
| ! | TGTTATGTTGTGTCATTAGA+TGG | - | tig0020679:5523-5542 | Msa1384700:intron | 30.0% |
| TTCACCAATATCAAGAAAGT+TGG | - | tig0020679:5893-5912 | Msa1384700:intron | 30.0% | |
| TATGCCAACTTTCTTGATAT+TGG | + | tig0020679:5900-5919 | None:intergenic | 30.0% | |
| TATTTATAGGGATTCAGATG+TGG | - | tig0020679:6153-6172 | Msa1384700:intron | 30.0% | |
| TGTCTTTGATGAACCTAAAA+TGG | - | tig0020679:6225-6244 | Msa1384700:intron | 30.0% | |
| GTCTTTGATGAACCTAAAAT+GGG | - | tig0020679:6226-6245 | Msa1384700:intron | 30.0% | |
| GTTATATACCCATATTCTCA+TGG | + | tig0020679:6272-6291 | None:intergenic | 30.0% | |
| AGAATATGGGTATATAACTC+TGG | - | tig0020679:6274-6293 | Msa1384700:intron | 30.0% | |
| ! | GTACCTTTTTATGAACAGTA+AGG | - | tig0020679:6465-6484 | Msa1384700:intron | 30.0% |
| GAACCTTACTGTTCATAAAA+AGG | + | tig0020679:6471-6490 | None:intergenic | 30.0% | |
| TAGTTAACATGTACAATCAC+AGG | + | tig0020679:6538-6557 | None:intergenic | 30.0% | |
| !! | GTCTCTTTTATTTATCTCTC+AGG | - | tig0020679:6740-6759 | Msa1384700:exon | 30.0% |
| ! | CTCACTGTTCTTTCTATTTT+CGG | - | tig0020679:6774-6793 | Msa1384700:five_prime_UTR | 30.0% |
| AGAAGAGACAGACATAAATG+TGG | - | tig0020679:4119-4138 | Msa1384700:three_prime_UTR | 35.0% | |
| ATTTGATAAACAGCAATGGC+AGG | - | tig0020679:4309-4328 | Msa1384700:three_prime_UTR | 35.0% | |
| ! | GATTGAATGGTTTTTGTCTC+TGG | + | tig0020679:4355-4374 | None:intergenic | 35.0% |
| ! | TGTGATTAGTTCAGAACTAG+TGG | + | tig0020679:5002-5021 | None:intergenic | 35.0% |
| TCCCTGACATCTTAATAATG+TGG | - | tig0020679:5167-5186 | Msa1384700:CDS | 35.0% | |
| !! | TTCAACGCATTAACTTGTTC+TGG | + | tig0020679:5569-5588 | None:intergenic | 35.0% |
| TTCTGTTATTCCCGATGAAT+CGG | - | tig0020679:5769-5788 | Msa1384700:intron | 35.0% | |
| TAATGTGTTGGAGATGTTAC+AGG | - | tig0020679:5865-5884 | Msa1384700:intron | 35.0% | |
| ATTGAATCAACACCTTGATC+CGG | + | tig0020679:6004-6023 | None:intergenic | 35.0% | |
| !! | TGTTGATTCAATTGCCAAGT+CGG | - | tig0020679:6012-6031 | Msa1384700:intron | 35.0% |
| CATAGCAATCATACAGCTTA+TGG | - | tig0020679:6193-6212 | Msa1384700:intron | 35.0% | |
| TTGATGAACCTAAAATGGGT+TGG | - | tig0020679:6230-6249 | Msa1384700:intron | 35.0% | |
| ! | TGATGAACCTAAAATGGGTT+GGG | - | tig0020679:6231-6250 | Msa1384700:intron | 35.0% |
| ATGCTCATACCATGAGAATA+TGG | - | tig0020679:6260-6279 | Msa1384700:intron | 35.0% | |
| TGCTCATACCATGAGAATAT+GGG | - | tig0020679:6261-6280 | Msa1384700:intron | 35.0% | |
| AGCTCAATTGAAGGAATTGT+TGG | + | tig0020679:6316-6335 | None:intergenic | 35.0% | |
| CGATCTAAAAGCTCAATTGA+AGG | + | tig0020679:6325-6344 | None:intergenic | 35.0% | |
| ! | TTTCTCTTTAGAAAGCCGAT+CGG | + | tig0020679:6353-6372 | None:intergenic | 35.0% |
| ! | GCTTTCTAAAGAGAAAGCAT+GGG | - | tig0020679:6357-6376 | Msa1384700:intron | 35.0% |
| ATCATCCTGATAAACTTGCA+AGG | - | tig0020679:6557-6576 | Msa1384700:intron | 35.0% | |
| TTCATCCTTGCAAGTTTATC+AGG | + | tig0020679:6565-6584 | None:intergenic | 35.0% | |
| GTAGTTGAGTTCTATGTCAA+CGG | - | tig0020679:6589-6608 | Msa1384700:CDS | 35.0% | |
| TAGTTGAGTTCTATGTCAAC+GGG | - | tig0020679:6590-6609 | Msa1384700:CDS | 35.0% | |
| ATCCTACTAATCAGAACCAT+CGG | + | tig0020679:6641-6660 | None:intergenic | 35.0% | |
| TTCCACTCTACTACAACAAT+TGG | + | tig0020679:6720-6739 | None:intergenic | 35.0% | |
| AACAACAACAACACAACCAC+TGG | + | tig0020679:4257-4276 | None:intergenic | 40.0% | |
| AAGAAGAACGCCGATGAAAA+CGG | + | tig0020679:4400-4419 | None:intergenic | 40.0% | |
| ! | TTCGCTTTCTTTTCACCACA+CGG | - | tig0020679:4429-4448 | Msa1384700:CDS | 40.0% |
| ATAGAAACCAACCAACCTTG+TGG | + | tig0020679:4494-4513 | None:intergenic | 40.0% | |
| TATCCTTAACATGTGCCCTT+AGG | - | tig0020679:5380-5399 | Msa1384700:CDS | 40.0% | |
| ATCCTTAACATGTGCCCTTA+GGG | - | tig0020679:5381-5400 | Msa1384700:CDS | 40.0% | |
| GATTCATCGGGAATAACAGA+AGG | + | tig0020679:5770-5789 | None:intergenic | 40.0% | |
| ! | CCAAGAGTTTTGCCAATCTA+GGG | + | tig0020679:5799-5818 | None:intergenic | 40.0% |
| TAGATTGGCAAAACTCTTGG+CGG | - | tig0020679:5799-5818 | Msa1384700:intron | 40.0% | |
| ! | TAAAGAGGTCGTTGTTGTTC+TGG | - | tig0020679:5835-5854 | Msa1384700:intron | 40.0% |
| TCTGGCTAACACTAATGTGT+TGG | - | tig0020679:5853-5872 | Msa1384700:intron | 40.0% | |
| TGTTGGAGATGTTACAGGTA+TGG | - | tig0020679:5870-5889 | Msa1384700:intron | 40.0% | |
| TTGAATCAACACCTTGATCC+GGG | + | tig0020679:6003-6022 | None:intergenic | 40.0% | |
| ! | GTTGATTCAATTGCCAAGTC+GGG | - | tig0020679:6013-6032 | Msa1384700:intron | 40.0% |
| TTGAGAGAGTTTCTGCAACT+AGG | - | tig0020679:6073-6092 | Msa1384700:intron | 40.0% | |
| ! | TATCTAGCCCAACCCATTTT+AGG | + | tig0020679:6241-6260 | None:intergenic | 40.0% |
| ! | GGCTTTCTAAAGAGAAAGCA+TGG | - | tig0020679:6356-6375 | Msa1384700:intron | 40.0% |
| CATCATAACCAGGATGTGAA+GGG | + | tig0020679:6414-6433 | None:intergenic | 40.0% | |
| TCATGCTGCAAAGAGAACAA+TGG | - | tig0020679:6438-6457 | Msa1384700:intron | 40.0% | |
| TCCTACTAATCAGAACCATC+GGG | + | tig0020679:6640-6659 | None:intergenic | 40.0% | |
| CACTCTACTACAACAATTGG+AGG | + | tig0020679:6717-6736 | None:intergenic | 40.0% | |
| CTCCAATTGTTGTAGTAGAG+TGG | - | tig0020679:6715-6734 | Msa1384700:CDS | 40.0% | |
| TTCTCAGAGTCGTGTTCAAC+TGG | + | tig0020679:4225-4244 | None:intergenic | 45.0% | |
| ACCATTCAATCACCGCATCT+CGG | - | tig0020679:4364-4383 | Msa1384700:three_prime_UTR | 45.0% | |
| ! | GTTTTCATCGGCGTTCTTCT+TGG | - | tig0020679:4399-4418 | Msa1384700:exon | 45.0% |
| GTGGAAATGAAGAAACCGTG+TGG | + | tig0020679:4447-4466 | None:intergenic | 45.0% | |
| !! | GAGAATGGTCTGAGTTGATG+CGG | + | tig0020679:4469-4488 | None:intergenic | 45.0% |
| ! | TGTGCTAACTTGTGCCCTAA+GGG | + | tig0020679:5398-5417 | None:intergenic | 45.0% |
| ! | TTGTGCTAACTTGTGCCCTA+AGG | + | tig0020679:5399-5418 | None:intergenic | 45.0% |
| GAATTCTGAGCTGAAGAAGC+AGG | - | tig0020679:5616-5635 | Msa1384700:intron | 45.0% | |
| GAAGCAGGTGAAAGGTCTAA+TGG | - | tig0020679:5631-5650 | Msa1384700:intron | 45.0% | |
| TCTAATGGAGAAGCTGCGTT+TGG | - | tig0020679:5646-5665 | Msa1384700:intron | 45.0% | |
| !! | ACGGAACAGTTTGTTGTGCT+TGG | - | tig0020679:5692-5711 | Msa1384700:intron | 45.0% |
| ! | TGTGCTTGGTGAGAAACACA+AGG | - | tig0020679:5706-5725 | Msa1384700:intron | 45.0% |
| !! | AAACACAAGGCTGGTCCTTT+TGG | - | tig0020679:5719-5738 | Msa1384700:intron | 45.0% |
| !! | TCTAGGGTTCACCGATTCAT+CGG | + | tig0020679:5783-5802 | None:intergenic | 45.0% |
| TGAATCGGTGAACCCTAGAT+TGG | - | tig0020679:5784-5803 | Msa1384700:intron | 45.0% | |
| CCCTAGATTGGCAAAACTCT+TGG | - | tig0020679:5796-5815 | Msa1384700:intron | 45.0% | |
| ! | GCCAAGAGTTTTGCCAATCT+AGG | + | tig0020679:5800-5819 | None:intergenic | 45.0% |
| TCCTGTCTATAGAAGAGACC+CGG | - | tig0020679:5982-6001 | Msa1384700:intron | 45.0% | |
| TATAGAAGAGACCCGGATCA+AGG | - | tig0020679:5989-6008 | Msa1384700:intron | 45.0% | |
| ATTCAATTGCCAAGTCGGGT+GGG | - | tig0020679:6017-6036 | Msa1384700:intron | 45.0% | |
| ACACAATATCGACATCCGAG+AGG | + | tig0020679:6111-6130 | None:intergenic | 45.0% | |
| GATGTGGAGTCAATGTCAGA+TGG | - | tig0020679:6169-6188 | Msa1384700:intron | 45.0% | |
| ! | TTTTAGATCGCGTTGCCGAT+CGG | - | tig0020679:6335-6354 | Msa1384700:intron | 45.0% |
| ! | CTCTTTTACCCTTCACATCC+TGG | - | tig0020679:6403-6422 | Msa1384700:intron | 45.0% |
| CCATCATAACCAGGATGTGA+AGG | + | tig0020679:6415-6434 | None:intergenic | 45.0% | |
| CCTTCACATCCTGGTTATGA+TGG | - | tig0020679:6412-6431 | Msa1384700:intron | 45.0% | |
| GCATGAAGTCCATCATAACC+AGG | + | tig0020679:6424-6443 | None:intergenic | 45.0% | |
| CCTACTAATCAGAACCATCG+GGG | + | tig0020679:6639-6658 | None:intergenic | 45.0% | |
| !! | TTATAATATTTATATACTTT+AGG | + | tig0020679:5111-5130 | None:intergenic | 5.0% |
| AGTCGTGTTCAACTGGATGG+AGG | + | tig0020679:4218-4237 | None:intergenic | 50.0% | |
| CAGAGTCGTGTTCAACTGGA+TGG | + | tig0020679:4221-4240 | None:intergenic | 50.0% | |
| CTGAGAAACAACGACTCCAG+TGG | - | tig0020679:4238-4257 | Msa1384700:three_prime_UTR | 50.0% | |
| TCCGAGATGCGGTGATTGAA+TGG | + | tig0020679:4368-4387 | None:intergenic | 50.0% | |
| !!! | ATCGCCGTTGCCGTTTTCAT+CGG | - | tig0020679:4387-4406 | Msa1384700:three_prime_UTR | 50.0% |
| AACGCCGATGAAAACGGCAA+CGG | + | tig0020679:4394-4413 | None:intergenic | 50.0% | |
| !! | AATGGTCTGAGTTGATGCGG+TGG | + | tig0020679:4466-4485 | None:intergenic | 50.0% |
| TCAGACCATTCTCAGCCACA+AGG | - | tig0020679:4476-4495 | Msa1384700:CDS | 50.0% | |
| ACCATTCTCAGCCACAAGGT+TGG | - | tig0020679:4480-4499 | Msa1384700:CDS | 50.0% | |
| ACCAACCTTGTGGCTGAGAA+TGG | + | tig0020679:4484-4503 | None:intergenic | 50.0% | |
| ! | TTCTCAGCCACAAGGTTGGT+TGG | - | tig0020679:4484-4503 | Msa1384700:CDS | 50.0% |
| ! | TGCCCTAAGGGCACATGTTA+AGG | + | tig0020679:5386-5405 | None:intergenic | 50.0% |
| GAGCTGAAGAAGCAGGTGAA+AGG | - | tig0020679:5623-5642 | Msa1384700:intron | 50.0% | |
| AATGGAGAAGCTGCGTTTGG+CGG | - | tig0020679:5649-5668 | Msa1384700:intron | 50.0% | |
| GCAAGGAAAGGGTCATGCTA+CGG | - | tig0020679:5673-5692 | Msa1384700:intron | 50.0% | |
| CTTGGTGAGAAACACAAGGC+TGG | - | tig0020679:5710-5729 | Msa1384700:intron | 50.0% | |
| ! | TGGTCCTTTTGGCACTGTCA+AGG | - | tig0020679:5730-5749 | Msa1384700:intron | 50.0% |
| AGAGCCTTGACAGTGCCAAA+AGG | + | tig0020679:5737-5756 | None:intergenic | 50.0% | |
| !! | CTAGGGTTCACCGATTCATC+GGG | + | tig0020679:5782-5801 | None:intergenic | 50.0% |
| TCCGGGTCTCTTCTATAGAC+AGG | + | tig0020679:5986-6005 | None:intergenic | 50.0% | |
| GATTCAATTGCCAAGTCGGG+TGG | - | tig0020679:6016-6035 | Msa1384700:intron | 50.0% | |
| AGGTTACAGCGTTCTCCTCT+CGG | - | tig0020679:6093-6112 | Msa1384700:intron | 50.0% | |
| !! | CCCCGATGGTTCTGATTAGT+AGG | - | tig0020679:6636-6655 | Msa1384700:CDS | 50.0% |
| CGTTTGGCGGAGCAAGGAAA+GGG | - | tig0020679:5662-5681 | Msa1384700:intron | 55.0% | |
| AGCATGATTCCCACCCGACT+TGG | + | tig0020679:6029-6048 | None:intergenic | 55.0% | |
| GGTGGGAATCATGCTGTCTC+TGG | - | tig0020679:6034-6053 | Msa1384700:intron | 55.0% | |
| AAGCTGCGTTTGGCGGAGCA+AGG | - | tig0020679:5656-5675 | Msa1384700:intron | 60.0% | |
| GCGTTTGGCGGAGCAAGGAA+AGG | - | tig0020679:5661-5680 | Msa1384700:intron | 60.0% | |
| GGCAACGGCGATCCGAGATG+CGG | + | tig0020679:4379-4398 | None:intergenic | 65.0% | |
| GCGCTCGACAGTTTCCCCGA+TGG | - | tig0020679:6622-6641 | Msa1384700:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020679 | gene | 4117 | 6951 | 4117 | ID=Msa1384700;Name=Msa1384700 |
| tig0020679 | mRNA | 4117 | 6951 | 4117 | ID=Msa1384700-mRNA-1;Parent=Msa1384700;Name=Msa1384700-mRNA-1;_AED=0.01;_eAED=0.01;_QI=207|1|1|1|1|1|2|297|428 |
| tig0020679 | exon | 4117 | 5526 | 4117 | ID=Msa1384700-mRNA-1:exon:9247;Parent=Msa1384700-mRNA-1 |
| tig0020679 | exon | 6571 | 6951 | 6571 | ID=Msa1384700-mRNA-1:exon:9246;Parent=Msa1384700-mRNA-1 |
| tig0020679 | five_prime_UTR | 6745 | 6951 | 6745 | ID=Msa1384700-mRNA-1:five_prime_utr;Parent=Msa1384700-mRNA-1 |
| tig0020679 | CDS | 6571 | 6744 | 6571 | ID=Msa1384700-mRNA-1:cds;Parent=Msa1384700-mRNA-1 |
| tig0020679 | CDS | 4414 | 5526 | 4414 | ID=Msa1384700-mRNA-1:cds;Parent=Msa1384700-mRNA-1 |
| tig0020679 | three_prime_UTR | 4117 | 4413 | 4117 | ID=Msa1384700-mRNA-1:three_prime_utr;Parent=Msa1384700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
