AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0515530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0515530 MtrunA17_Chr3g0124821 97.158 387 10 1 1 386 1 387 0.0 774
Msa0515530 MtrunA17_Chr4g0037131 49.219 256 105 5 99 354 14 244 1.58e-76 240
Msa0515530 MtrunA17_Chr5g0405731 48.473 262 108 6 99 360 13 247 2.25e-75 236
Msa0515530 MtrunA17_Chr4g0030171 45.703 256 113 6 100 354 16 246 4.16e-67 214
Msa0515530 MtrunA17_Chr3g0137751 32.692 312 148 13 55 357 59 317 1.08e-32 125
Msa0515530 MtrunA17_Chr2g0292151 26.996 263 154 7 120 355 63 314 4.26e-17 82.4
Msa0515530 MtrunA17_Chr7g0244461 27.381 252 154 7 120 353 54 294 1.02e-15 77.8
Msa0515530 MtrunA17_Chr4g0013171 29.231 260 141 11 120 353 61 303 7.21e-15 75.1
Msa0515530 MtrunA17_Chr1g0188431 30.000 260 139 12 120 356 73 312 9.61e-15 75.1
Msa0515530 MtrunA17_Chr4g0013721 30.275 218 121 8 179 376 193 399 1.49e-14 75.1
Msa0515530 MtrunA17_Chr3g0124831 100.000 44 0 0 392 435 1 44 2.17e-14 67.0
Msa0515530 MtrunA17_Chr2g0320031 25.632 277 172 8 105 362 45 306 4.14e-14 73.2
Msa0515530 MtrunA17_Chr2g0291751 26.132 287 173 10 97 355 39 314 1.59e-13 71.6
Msa0515530 MtrunA17_Chr5g0438021 25.856 263 146 8 120 353 65 307 4.52e-13 70.1
Msa0515530 MtrunA17_Chr7g0254201 26.335 281 167 9 101 355 30 296 5.38e-13 69.7
Msa0515530 MtrunA17_Chr2g0292181 29.648 199 112 7 179 355 131 323 1.57e-12 68.6
Msa0515530 MtrunA17_Chr2g0292111 26.437 261 154 9 120 353 63 312 1.82e-12 68.6
Msa0515530 MtrunA17_Chr2g0292251 25.954 262 156 8 120 354 62 312 1.96e-12 68.2
Msa0515530 MtrunA17_Chr7g0258811 27.723 202 112 7 177 353 161 353 3.18e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0515530 AT1G77490.1 71.122 419 114 4 19 434 2 416 0.0 597
Msa0515530 AT1G77490.2 71.122 419 114 4 19 434 2 416 0.0 597
Msa0515530 AT4G08390.3 84.420 276 43 0 90 365 96 371 0.0 511
Msa0515530 AT4G08390.2 84.420 276 43 0 90 365 97 372 0.0 511
Msa0515530 AT4G08390.5 84.420 276 43 0 90 365 97 372 0.0 511
Msa0515530 AT4G08390.1 84.420 276 43 0 90 365 97 372 0.0 511
Msa0515530 AT4G08390.4 76.812 276 38 1 90 365 97 346 6.78e-159 452
Msa0515530 AT4G35000.1 50.192 261 103 6 99 359 13 246 6.39e-77 241
Msa0515530 AT3G09640.2 48.235 255 107 5 100 354 17 246 5.67e-70 222
Msa0515530 AT3G09640.1 48.235 255 107 5 100 354 17 246 5.67e-70 222
Msa0515530 AT1G07890.2 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515530 AT1G07890.8 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515530 AT1G07890.4 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515530 AT1G07890.7 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515530 AT1G07890.1 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515530 AT1G07890.3 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515530 AT1G07890.5 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515530 AT1G07890.6 47.266 256 109 5 100 354 16 246 6.97e-70 222
Msa0515530 AT4G35970.1 43.774 265 121 6 99 363 12 248 5.40e-63 205
Msa0515530 AT4G35970.2 42.979 235 108 5 99 333 12 220 4.58e-54 180
Msa0515530 AT4G32320.1 33.230 322 154 13 54 357 48 326 4.06e-35 133
Msa0515530 AT4G33420.1 33.659 205 107 8 170 357 119 311 6.47e-17 82.0
Msa0515530 AT4G33420.2 33.659 205 107 8 170 357 166 358 6.91e-17 82.4
Msa0515530 AT2G18140.1 27.698 278 142 11 120 362 69 322 3.64e-16 79.7
Msa0515530 AT5G66390.1 29.139 302 146 13 103 358 45 324 3.85e-16 79.7
Msa0515530 AT2G22420.1 27.338 278 159 9 104 353 41 303 5.26e-16 79.3
Msa0515530 AT2G18150.1 27.820 266 143 11 120 353 70 318 1.55e-15 77.8
Msa0515530 AT1G14550.1 28.464 267 149 11 120 362 60 308 1.98e-15 77.4
Msa0515530 AT3G28200.1 30.144 209 116 6 165 356 106 301 1.01e-14 75.1
Msa0515530 AT1G24110.1 29.500 200 111 5 179 356 116 307 1.61e-14 74.7
Msa0515530 AT1G49570.1 25.442 283 151 11 120 364 82 342 1.12e-13 72.4
Msa0515530 AT1G14540.1 27.895 190 116 5 179 353 114 297 9.33e-12 66.2

Find 163 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATAGATCAATTTCATTT+TGG 0.115182 3_4:+66781166 None:intergenic
ATATCTGTTTGGAAACTAAT+TGG 0.210656 3_4:-66781721 Msa0515530:exon
AACCTTTCCAGAGGAGTAAT+TGG 0.234989 3_4:+66782179 None:intergenic
CCAGGAAGTCTCCCTTCTTC+AGG 0.253068 3_4:+66784925 None:intergenic
TGCTCCAAGGTTGCTGAGTT+TGG 0.256056 3_4:+66782479 None:intergenic
CTCCTCAATATTCTTATTAT+AGG 0.258901 3_4:+66785346 None:intergenic
GTCAACTATATCTGCAAATT+AGG 0.266142 3_4:+66787660 None:intergenic
CCTTCTTCAGGGCATTGTTC+AGG 0.268066 3_4:+66784937 None:intergenic
CATAATTGTTATTGCTGCTT+TGG 0.283340 3_4:-66781754 Msa0515530:CDS
TTTGACTTTAGAGCCTTATC+TGG 0.287367 3_4:+66781792 None:intergenic
CAGGAAATTGTTGCATTATC+TGG 0.291185 3_4:-66784320 Msa0515530:CDS
CAATAACAATTATGATGTTT+AGG 0.296597 3_4:+66781763 None:intergenic
CCTGAAGAAGGGAGACTTCC+TGG 0.303606 3_4:-66784925 Msa0515530:intron
CATGCGTGCGGCGGCGGCGC+CGG 0.306467 3_4:+66787236 None:intergenic
TTCTCACATCTTTCTCAATC+AGG 0.306856 3_4:-66787091 Msa0515530:intron
AGTATAAATGTAGGGGTATA+TGG 0.307712 3_4:+66781442 None:intergenic
TTTCAGGGCATTGTGGTAGA+TGG 0.326025 3_4:-66782237 Msa0515530:intron
AACTTCTCTCCCACTACATT+TGG 0.336185 3_4:+66782210 None:intergenic
GCTGAAATCCAATGATATAA+AGG 0.340292 3_4:+66781382 None:intergenic
AATAAGATGGGTCAAGTATA+AGG 0.349609 3_4:-66787499 Msa0515530:five_prime_UTR
TAAAACTCAACGAAACAAAA+TGG 0.353130 3_4:-66787316 Msa0515530:exon
TACAACACGGAAAAGAATAA+TGG 0.354199 3_4:-66781207 Msa0515530:three_prime_UTR
AAAGATGGGCCAGGAGCACC+TGG 0.354863 3_4:-66782924 Msa0515530:CDS
AATATTTGTCTTTGATTGGC+TGG 0.361482 3_4:+66785155 None:intergenic
TAAGTTCTGTCATCCTCTTT+TGG 0.362946 3_4:-66786866 Msa0515530:intron
CTGGAGAGTTGGAACAATTA+CGG 0.365633 3_4:-66781514 Msa0515530:three_prime_UTR
CCTGAATATTTGTCTTTGAT+TGG 0.366131 3_4:+66785151 None:intergenic
GTCTACTCTTCCATATTTCA+TGG 0.367084 3_4:+66784969 None:intergenic
TGGAGAGTTGGAACAATTAC+GGG 0.367409 3_4:-66781513 Msa0515530:three_prime_UTR
CCAATCAAAGACAAATATTC+AGG 0.367571 3_4:-66785151 Msa0515530:CDS
CTAGACCAGACCGCAGTGGC+TGG 0.369322 3_4:-66784277 Msa0515530:CDS
ATTATCTGGTGCGCACACAC+TGG 0.384414 3_4:-66784306 Msa0515530:CDS
TTCTATGTGACAGATTCGTT+TGG 0.387767 3_4:-66785387 Msa0515530:intron
TTATCTGGTGCGCACACACT+GGG 0.393437 3_4:-66784305 Msa0515530:CDS
ATTTCAATAAAATTTGTGTT+TGG 0.396018 3_4:-66781108 Msa0515530:three_prime_UTR
GTTTGACAACTCTTACTTCA+AGG 0.396786 3_4:-66782871 Msa0515530:intron
GACGGTGGCTCTGGTGGCGG+AGG 0.401403 3_4:+66787209 None:intergenic
GTATAATTTCCTTAGTCCTC+TGG 0.405390 3_4:+66781464 None:intergenic
TCTATGTGACAGATTCGTTT+GGG 0.406923 3_4:-66785386 Msa0515530:intron
GGATTAATAAGAAAACTAAA+AGG 0.408999 3_4:+66781265 None:intergenic
TTGCCCCAGCCACTGCGGTC+TGG 0.411028 3_4:+66784272 None:intergenic
AGAGATGGAATCAGCTTTGT+GGG 0.424573 3_4:+66781359 None:intergenic
GGGAATCATGCGTGCGGCGG+CGG 0.431703 3_4:+66787230 None:intergenic
TTTCTCATTCTACAGAAAGA+TGG 0.432931 3_4:-66782939 Msa0515530:intron
CTTTAACCATTGTGCAGTCC+AGG 0.440549 3_4:+66782893 None:intergenic
GTACTTGAGATTCAAGTGTT+TGG 0.441624 3_4:+66787540 None:intergenic
TCTTTGAATCTTCAGGAAGC+TGG 0.446122 3_4:-66785006 Msa0515530:intron
CAGGAAGTCTCCCTTCTTCA+GGG 0.452380 3_4:+66784926 None:intergenic
GGGGTGAAAGTATAAATGTA+GGG 0.452749 3_4:+66781434 None:intergenic
CAAGCAATTGAGCGAGGAAA+CGG 0.455809 3_4:+66787131 None:intergenic
AGTACATGAAAATGACTCTT+GGG 0.456968 3_4:-66787522 Msa0515530:five_prime_UTR
ACCACAATGGCTACAATCAC+CGG 0.459447 3_4:-66787255 Msa0515530:CDS
GTAGCAGCCAATTACTCCTC+TGG 0.460289 3_4:-66782186 Msa0515530:CDS
TAGACCAGACCGCAGTGGCT+GGG 0.460927 3_4:-66784276 Msa0515530:CDS
TATACCGTGTATTTAGTCTC+AGG 0.464888 3_4:+66784248 None:intergenic
ATTCGTAGATGCAAAATTGA+AGG 0.465625 3_4:+66781240 None:intergenic
CTGAAATCCAATGATATAAA+GGG 0.466579 3_4:+66781383 None:intergenic
ATTGAGCGAGGAAACGGAAC+TGG 0.467178 3_4:+66787137 None:intergenic
CAGGTTCAAACTTTGCTCCA+AGG 0.468266 3_4:+66782466 None:intergenic
AAGTACATGAAAATGACTCT+TGG 0.469928 3_4:-66787523 Msa0515530:five_prime_UTR
CGCAAATGATCCGCAGGTGA+AGG 0.470664 3_4:+66784466 None:intergenic
CATGCCAAACTCAGCAACCT+TGG 0.474570 3_4:-66782483 Msa0515530:CDS
GCACTGAAAATTACCAAAAG+AGG 0.475415 3_4:+66786853 None:intergenic
ATGCTATGAGGAAGAAGATA+CGG 0.479276 3_4:-66781842 Msa0515530:CDS
CAACGTGAACAGACCTCTGC+AGG 0.481098 3_4:+66782447 None:intergenic
AATGACTCTTGGGAATAAGA+TGG 0.484015 3_4:-66787512 Msa0515530:five_prime_UTR
GAAATTCACTACAAGTGAAT+CGG 0.484500 3_4:-66781685 Msa0515530:three_prime_UTR
TTGACTTTAGAGCCTTATCT+GGG 0.486207 3_4:+66781793 None:intergenic
GAGGAGAAGTTCGTGCTTCG+AGG 0.488828 3_4:-66786972 Msa0515530:CDS
GAGAGATGGAATCAGCTTTG+TGG 0.491842 3_4:+66781358 None:intergenic
CCTTGTCATTCAACCCCATT+CGG 0.491886 3_4:+66784431 None:intergenic
TTCTCATTCTACAGAAAGAT+GGG 0.496196 3_4:-66782938 Msa0515530:intron
AGACCAGACCGCAGTGGCTG+GGG 0.496549 3_4:-66784275 Msa0515530:CDS
TTCAAATCTTAAGCTACCAT+TGG 0.498143 3_4:+66785304 None:intergenic
CGTGCTTCGAGGGGACGATT+CGG 0.498992 3_4:-66786961 Msa0515530:CDS
TGAGAAATATGCTGTAGATC+AGG 0.501966 3_4:-66782535 Msa0515530:CDS
GAAGATACGGGCTGAATATG+AGG 0.502305 3_4:-66781829 Msa0515530:CDS
CCTGAACAATGCCCTGAAGA+AGG 0.503982 3_4:-66784937 Msa0515530:CDS
AGGGGTGAAAGTATAAATGT+AGG 0.504623 3_4:+66781433 None:intergenic
GTGATAGAGCCAGAGGACTA+AGG 0.505410 3_4:-66781473 Msa0515530:three_prime_UTR
GCAAATGATCCGCAGGTGAA+GGG 0.506978 3_4:+66784467 None:intergenic
TGAGACGGTGGCTCTGGTGG+CGG 0.507725 3_4:+66787206 None:intergenic
GCTGAATATGAGGCGGTTGG+CGG 0.508251 3_4:-66781819 Msa0515530:CDS
ATACTCCACTACTGGAGAGT+TGG 0.509908 3_4:-66781525 Msa0515530:three_prime_UTR
AGGAGAAGTTCGTGCTTCGA+GGG 0.513885 3_4:-66786971 Msa0515530:CDS
AGATGGGCCAGGAGCACCTG+GGG 0.518802 3_4:-66782922 Msa0515530:CDS
AAGGAGAAGGAAGAGAGAGA+TGG 0.521545 3_4:+66781344 None:intergenic
TGAGAGTGAGACGGTGGCTC+TGG 0.525646 3_4:+66787200 None:intergenic
CGTTTGGGATGGCATGATGC+TGG 0.534032 3_4:-66785371 Msa0515530:CDS
AAGCGCTAGAGAAGATATCA+AGG 0.535333 3_4:-66786902 Msa0515530:CDS
GAAGTTTCAATGCATTTACA+AGG 0.538155 3_4:+66785179 None:intergenic
TCTACTCTTCCATATTTCAT+GGG 0.539117 3_4:+66784970 None:intergenic
TAATGAATACATACCAGCAT+TGG 0.539538 3_4:+66785262 None:intergenic
ATGACTCTTGGGAATAAGAT+GGG 0.540196 3_4:-66787511 Msa0515530:five_prime_UTR
ACGGTGGCTCTGGTGGCGGA+GGG 0.544294 3_4:+66787210 None:intergenic
CAAATGATCCGCAGGTGAAG+GGG 0.545564 3_4:+66784468 None:intergenic
GGTTGGCGGAAGCCCAGATA+AGG 0.547496 3_4:-66781805 Msa0515530:CDS
AATTGAAATGGTGAAGGAGA+AGG 0.549067 3_4:+66781331 None:intergenic
CCACAGAGAGGTGGAGCCAA+TGG 0.553837 3_4:-66785320 Msa0515530:CDS
GGAGGGAATCATGCGTGCGG+CGG 0.556091 3_4:+66787227 None:intergenic
TACCTATAATAAGAATATTG+AGG 0.557454 3_4:-66785348 Msa0515530:CDS
AAATGATCCGCAGGTGAAGG+GGG 0.559516 3_4:+66784469 None:intergenic
CTGAACAATGCCCTGAAGAA+GGG 0.562898 3_4:-66784936 Msa0515530:CDS
TTGAAACATGGAGCCAATGC+TGG 0.568407 3_4:-66785275 Msa0515530:intron
TGCTATGAGGAAGAAGATAC+GGG 0.568469 3_4:-66781841 Msa0515530:CDS
AATCCACGATATGCTTGTGT+AGG 0.569340 3_4:+66787453 None:intergenic
TGTGACAGATTCGTTTGGGA+TGG 0.570034 3_4:-66785382 Msa0515530:intron
TTTGAAGTTGAGTTGAAACA+TGG 0.570207 3_4:-66785287 Msa0515530:CDS
AAGATGGGCCAGGAGCACCT+GGG 0.570888 3_4:-66782923 Msa0515530:CDS
AAGAGCTGTCTGATGCTATG+AGG 0.570930 3_4:-66781854 Msa0515530:CDS
TATGGAAGAGTAGACGTCAC+TGG 0.572351 3_4:-66784961 Msa0515530:CDS
TGAAAATGAGAAGAACGAAC+GGG 0.572470 3_4:+66787173 None:intergenic
TTGAATCTTCAGGAAGCTGG+AGG 0.572995 3_4:-66785003 Msa0515530:intron
GTAGATGCAAAATTGAAGGA+AGG 0.577399 3_4:+66781244 None:intergenic
AGATGGTTCTCCAAATGTAG+TGG 0.579625 3_4:-66782220 Msa0515530:CDS
GTCAAGTATAAGGTAGGACT+AGG 0.580370 3_4:-66787489 Msa0515530:five_prime_UTR
ACTTGACGCAAATGATCCGC+AGG 0.584569 3_4:+66784460 None:intergenic
AGCTAGTGCTACAGCTGTGG+AGG 0.584663 3_4:-66785101 Msa0515530:intron
ATTCTACAGAAAGATGGGCC+AGG 0.587158 3_4:-66782933 Msa0515530:intron
AGATGGGTCAAGTATAAGGT+AGG 0.587771 3_4:-66787495 Msa0515530:five_prime_UTR
TTGTTCCAACTCTCCAGTAG+TGG 0.589391 3_4:+66781520 None:intergenic
GTGATTGTAGCCATTGTGGT+TGG 0.591078 3_4:+66787258 None:intergenic
AAAAGTATTGGGTAGATGAG+TGG 0.592611 3_4:-66787574 Msa0515530:five_prime_UTR
CGGGCTGAATATGAGGCGGT+TGG 0.594896 3_4:-66781822 Msa0515530:CDS
GAGGAGTGGCCACAGAGAGG+TGG 0.596367 3_4:-66785329 Msa0515530:CDS
AGCCAATTACTCCTCTGGAA+AGG 0.597209 3_4:-66782181 Msa0515530:intron
ATGAAAATGAGAAGAACGAA+CGG 0.600197 3_4:+66787172 None:intergenic
ATGCAAGTATGAGTAGAAGA+TGG 0.601180 3_4:+66787638 None:intergenic
GTTAGCTAGTGCTACAGCTG+TGG 0.601973 3_4:-66785104 Msa0515530:CDS
CATTAATACGCAAATGCCAA+AGG 0.602261 3_4:+66781638 None:intergenic
AGCAAAGTTTGAACCTGCAG+AGG 0.602470 3_4:-66782460 Msa0515530:intron
GAGTGAGACGGTGGCTCTGG+TGG 0.602864 3_4:+66787203 None:intergenic
TTCGAGGGGACGATTCGGAA+CGG 0.614911 3_4:-66786956 Msa0515530:CDS
GACAATCCTGGACTGCACAA+TGG 0.620331 3_4:-66782899 Msa0515530:CDS
GATGGTTCTCCAAATGTAGT+GGG 0.623661 3_4:-66782219 Msa0515530:CDS
AGAAAGATGTGAGAAATGCG+AGG 0.626873 3_4:+66787099 None:intergenic
CCGAATGGGGTTGAATGACA+AGG 0.626939 3_4:-66784431 Msa0515530:intron
CCATTGGCTCCACCTCTCTG+TGG 0.637470 3_4:+66785320 None:intergenic
GCCGGTGATTGTAGCCATTG+TGG 0.638714 3_4:+66787254 None:intergenic
GGCGGAGGGAATCATGCGTG+CGG 0.643016 3_4:+66787224 None:intergenic
CTGGTGCGCACACACTGGGG+CGG 0.645690 3_4:-66784301 Msa0515530:CDS
GGGTGAAAGTATAAATGTAG+GGG 0.647476 3_4:+66781435 None:intergenic
TATCTGGTGCGCACACACTG+GGG 0.652499 3_4:-66784304 Msa0515530:CDS
AATGATCCGCAGGTGAAGGG+GGG 0.652617 3_4:+66784470 None:intergenic
ATAATAAGAATATTGAGGAG+TGG 0.654700 3_4:-66785343 Msa0515530:CDS
GGAGAAGTTCGTGCTTCGAG+GGG 0.655631 3_4:-66786970 Msa0515530:CDS
CAAGCTTAAAACCTTTCCAG+AGG 0.659132 3_4:+66782170 None:intergenic
AAACCTACACAAGCATATCG+TGG 0.661632 3_4:-66787456 Msa0515530:five_prime_UTR
GTGGTTGGTGAAGAGAGTGA+AGG 0.663024 3_4:+66787273 None:intergenic
ACTCTCTTCACCAACCACAA+TGG 0.666345 3_4:-66787268 Msa0515530:CDS
AAACAATGTGATAGAGCCAG+AGG 0.667902 3_4:-66781480 Msa0515530:three_prime_UTR
CGGTCTAGACCAGACCGCAG+TGG 0.670072 3_4:-66784281 Msa0515530:CDS
AGAACGCAAGCAATTGAGCG+AGG 0.671598 3_4:+66787125 None:intergenic
CAGGTTTGCCCCAGCCACTG+CGG 0.673272 3_4:+66784267 None:intergenic
GATGGGCCAGGAGCACCTGG+GGG 0.675083 3_4:-66782921 Msa0515530:CDS
CAAACCTGAGACTAAATACA+CGG 0.675596 3_4:-66784252 Msa0515530:intron
GGATTATCATCCAAAACACA+AGG 0.696794 3_4:-66787388 Msa0515530:five_prime_UTR
GAGATGGAATCAGCTTTGTG+GGG 0.697416 3_4:+66781360 None:intergenic
ATTGAGGAGTGGCCACAGAG+AGG 0.708811 3_4:-66785332 Msa0515530:CDS
GATACGGGCTGAATATGAGG+CGG 0.710767 3_4:-66781826 Msa0515530:CDS
AAATGAGAAGAACGAACGGG+AGG 0.713916 3_4:+66787176 None:intergenic
GGAGGTTGAGAGTGAGACGG+TGG 0.718548 3_4:+66787194 None:intergenic
ACGGGAGGTTGAGAGTGAGA+CGG 0.719482 3_4:+66787191 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAGAATATAAAATAA+TGG + chr3_4:66782710-66782729 None:intergenic 10.0%
!!! TTATTTTTTGATTATTTTGT+TGG - chr3_4:66785920-66785939 Msa0515530:intron 10.0%
!!! TATTTTTTGATTATTTTGTT+GGG - chr3_4:66785921-66785940 Msa0515530:intron 10.0%
!!! TATTTCACAAATAATTTTAT+GGG + chr3_4:66786185-66786204 None:intergenic 10.0%
!!! ATATTTCACAAATAATTTTA+TGG + chr3_4:66786186-66786205 None:intergenic 10.0%
!! ATAAAAAAGAAAACTTTAAT+AGG + chr3_4:66786491-66786510 None:intergenic 10.0%
!! TTATTTATTTATTTAGATGC+TGG - chr3_4:66784260-66784279 Msa0515530:CDS 15.0%
!!! AAATGAGACATTTTTTTTTT+TGG + chr3_4:66784950-66784969 None:intergenic 15.0%
!!! ATAATCAAATAGTTTTTGAA+TGG - chr3_4:66785748-66785767 Msa0515530:intron 15.0%
!! AAAACAATATAAGATTCATT+TGG - chr3_4:66785790-66785809 Msa0515530:intron 15.0%
!!! ATTATTATCACATGTAATTT+TGG - chr3_4:66786817-66786836 Msa0515530:intron 15.0%
!!! TTTTATTTTTTTACAGACTA+CGG + chr3_4:66787159-66787178 None:intergenic 15.0%
!! ATTTCAATAAAATTTGTGTT+TGG - chr3_4:66787645-66787664 Msa0515530:five_prime_UTR 15.0%
!!! TTTTTCCCATAAAAAAGTAT+TGG - chr3_4:66781167-66781186 Msa0515530:three_prime_UTR 20.0%
!!! TTTTCCCATAAAAAAGTATT+GGG - chr3_4:66781168-66781187 Msa0515530:three_prime_UTR 20.0%
!!! TTGATTTCTCTGTAATTTTA+TGG - chr3_4:66782030-66782049 Msa0515530:intron 20.0%
!!! GTTGTTTTTATAAGCTATAT+TGG - chr3_4:66782171-66782190 Msa0515530:intron 20.0%
!!! AAATACGTTAAGAGTATATT+TGG - chr3_4:66782347-66782366 Msa0515530:intron 20.0%
!!! AGTATATTTGGTTTCATTTT+TGG - chr3_4:66782359-66782378 Msa0515530:intron 20.0%
!! AGAATCAATTTAACAATGTT+TGG - chr3_4:66782407-66782426 Msa0515530:intron 20.0%
!! GAATCAATTTAACAATGTTT+GGG - chr3_4:66782408-66782427 Msa0515530:intron 20.0%
!! TTAAATTGATATGTGATTTC+CGG - chr3_4:66782747-66782766 Msa0515530:intron 20.0%
!! TACCTATAATAAGAATATTG+AGG - chr3_4:66783405-66783424 Msa0515530:intron 20.0%
!! ATTACTCCAATTAGATATAT+GGG + chr3_4:66783859-66783878 None:intergenic 20.0%
!! TATTACTCCAATTAGATATA+TGG + chr3_4:66783860-66783879 None:intergenic 20.0%
!!! GAGACAATAAGTTTTTTATT+AGG - chr3_4:66783967-66783986 Msa0515530:intron 20.0%
!!! AATAAATAAGGGTATATTAG+TGG + chr3_4:66785037-66785056 None:intergenic 20.0%
!! GGTTGAAATACAATAAATAA+GGG + chr3_4:66785048-66785067 None:intergenic 20.0%
!!! ACTCAACTCAAATTTTAATT+CGG - chr3_4:66785316-66785335 Msa0515530:CDS 20.0%
!! TATTCATATCTCTTGAAATT+TGG + chr3_4:66785537-66785556 None:intergenic 20.0%
!! TACTTAAGATTATGTATAGT+TGG + chr3_4:66785683-66785702 None:intergenic 20.0%
!!! ATTTTATAACAGTATAGGAA+GGG - chr3_4:66785957-66785976 Msa0515530:intron 20.0%
!! TTGTAATTATTGTTACATAC+AGG - chr3_4:66786018-66786037 Msa0515530:intron 20.0%
!! TGTTGAATAAATATGAACAT+GGG + chr3_4:66786142-66786161 None:intergenic 20.0%
!! ATGTTGAATAAATATGAACA+TGG + chr3_4:66786143-66786162 None:intergenic 20.0%
!! AAATTATTTGTGAAATATGC+AGG - chr3_4:66786188-66786207 Msa0515530:intron 20.0%
!!! TTCTTTTTTATCTGTTTTTC+AGG - chr3_4:66786500-66786519 Msa0515530:intron 20.0%
!!! TCTTTTTTATCTGTTTTTCA+GGG - chr3_4:66786501-66786520 Msa0515530:intron 20.0%
!! AAATCTTAAATGAAGAAGAA+AGG - chr3_4:66786840-66786859 Msa0515530:intron 20.0%
!! CAATAACAATTATGATGTTT+AGG + chr3_4:66786993-66787012 None:intergenic 20.0%
!!! AATTTTACCCTTTATATCAT+TGG - chr3_4:66787363-66787382 Msa0515530:five_prime_UTR 20.0%
!! GAAATCATATAAGAAAAACA+AGG + chr3_4:66787459-66787478 None:intergenic 20.0%
!! GGATTAATAAGAAAACTAAA+AGG + chr3_4:66787491-66787510 None:intergenic 20.0%
!!! AATGTTTTTACATTACAACA+CGG - chr3_4:66787533-66787552 Msa0515530:five_prime_UTR 20.0%
!!! TCATAGATCAATTTCATTTT+GGG + chr3_4:66787589-66787608 None:intergenic 20.0%
!!! ATCATAGATCAATTTCATTT+TGG + chr3_4:66787590-66787609 None:intergenic 20.0%
!!! TCTACCCAATACTTTTTTAT+GGG + chr3_4:66781175-66781194 None:intergenic 25.0%
!!! ATCTACCCAATACTTTTTTA+TGG + chr3_4:66781176-66781195 None:intergenic 25.0%
! TAAAACTCAACGAAACAAAA+TGG - chr3_4:66781437-66781456 Msa0515530:three_prime_UTR 25.0%
!!! ATTTTCAGTGCTTTTTTTCT+TGG - chr3_4:66781912-66781931 Msa0515530:intron 25.0%
! CTTGGATATCAAGATTATTA+GGG + chr3_4:66782323-66782342 None:intergenic 25.0%
! TTGTCTGAATTAATTCTAAC+TGG - chr3_4:66782452-66782471 Msa0515530:intron 25.0%
! TTAGTTAAAAGTGAGCTAAA+TGG + chr3_4:66782578-66782597 None:intergenic 25.0%
!! TCCAAATCAATTTTTGTCAT+CGG - chr3_4:66782609-66782628 Msa0515530:intron 25.0%
! TTAGTTACTTAATGTGTGTT+TGG + chr3_4:66782645-66782664 None:intergenic 25.0%
! TTGAATCAATCATCAAACAA+CGG + chr3_4:66782805-66782824 None:intergenic 25.0%
! TTTAATGTAATCACATGTGT+CGG + chr3_4:66783049-66783068 None:intergenic 25.0%
! GTAAAGCTATAAATCTCTTA+TGG + chr3_4:66783164-66783183 None:intergenic 25.0%
!!! CTTTTTTCTTTTCATTGTGA+CGG - chr3_4:66783332-66783351 Msa0515530:intron 25.0%
! CTCCTCAATATTCTTATTAT+AGG + chr3_4:66783410-66783429 None:intergenic 25.0%
! ATAATAAGAATATTGAGGAG+TGG - chr3_4:66783410-66783429 Msa0515530:intron 25.0%
! CAATATTCAGATATAATTGG+TGG + chr3_4:66783518-66783537 None:intergenic 25.0%
! GAGCAATATTCAGATATAAT+TGG + chr3_4:66783521-66783540 None:intergenic 25.0%
!! CATATTTCATGGGAATTTTT+GGG + chr3_4:66783776-66783795 None:intergenic 25.0%
! GTAAAACCCATATATCTAAT+TGG - chr3_4:66783850-66783869 Msa0515530:intron 25.0%
! AATCATGTTTAATAGCTTGA+GGG + chr3_4:66784546-66784565 None:intergenic 25.0%
! AAATCATGTTTAATAGCTTG+AGG + chr3_4:66784547-66784566 None:intergenic 25.0%
! TGGTAAAATAATCATTCGAA+TGG - chr3_4:66784668-66784687 Msa0515530:intron 25.0%
! AAAATAATCATTCGAATGGA+TGG - chr3_4:66784672-66784691 Msa0515530:intron 25.0%
! TCACCTTTAGACTTAATAAA+AGG - chr3_4:66784812-66784831 Msa0515530:intron 25.0%
!! TGACCTTTTATTAAGTCTAA+AGG + chr3_4:66784818-66784837 None:intergenic 25.0%
! GGGTTGAAATACAATAAATA+AGG + chr3_4:66785049-66785068 None:intergenic 25.0%
! ATGAGAAACTTATAATGAGA+TGG - chr3_4:66785181-66785200 Msa0515530:CDS 25.0%
! AACAATTGTAGCAAAGATTT+AGG + chr3_4:66785635-66785654 None:intergenic 25.0%
!!! TTTTTGATTATTTTGTTGGG+AGG - chr3_4:66785924-66785943 Msa0515530:intron 25.0%
!!! TTTTGATTATTTTGTTGGGA+GGG - chr3_4:66785925-66785944 Msa0515530:intron 25.0%
!! GATTTTATAACAGTATAGGA+AGG - chr3_4:66785956-66785975 Msa0515530:intron 25.0%
! AAAAAAGGATGAAGATCTAT+TGG - chr3_4:66786051-66786070 Msa0515530:intron 25.0%
!!! TGTTTTGTGCATTTTTAGAT+GGG - chr3_4:66786335-66786354 Msa0515530:intron 25.0%
! GAAAACTTTAATAGGTGATT+TGG + chr3_4:66786483-66786502 None:intergenic 25.0%
! ATATCTGTTTGGAAACTAAT+TGG - chr3_4:66787032-66787051 Msa0515530:intron 25.0%
!!! CACTTGTTATTTTTTTCCTT+TGG - chr3_4:66787099-66787118 Msa0515530:CDS 25.0%
!! AGATTTTCTTCTTACTTGTA+GGG + chr3_4:66787342-66787361 None:intergenic 25.0%
! CTGAAATCCAATGATATAAA+GGG + chr3_4:66787373-66787392 None:intergenic 25.0%
! GAGAATCAGAAAAATTGAAA+TGG + chr3_4:66787437-66787456 None:intergenic 25.0%
!! CATAGATCAATTTCATTTTG+GGG + chr3_4:66787588-66787607 None:intergenic 25.0%
AAGTACATGAAAATGACTCT+TGG - chr3_4:66781230-66781249 Msa0515530:three_prime_UTR 30.0%
AGTACATGAAAATGACTCTT+GGG - chr3_4:66781231-66781250 Msa0515530:three_prime_UTR 30.0%
AATAAGATGGGTCAAGTATA+AGG - chr3_4:66781254-66781273 Msa0515530:three_prime_UTR 30.0%
!! ACAAGAAGTAGAGTTTTGAT+TGG - chr3_4:66781334-66781353 Msa0515530:three_prime_UTR 30.0%
ATGAAAATGAGAAGAACGAA+CGG + chr3_4:66781584-66781603 None:intergenic 30.0%
!! TAAGTTTTGTGAGACTGTTT+AGG + chr3_4:66782262-66782281 None:intergenic 30.0%
CCTTGGATATCAAGATTATT+AGG + chr3_4:66782324-66782343 None:intergenic 30.0%
CCTAATAATCTTGATATCCA+AGG - chr3_4:66782321-66782340 Msa0515530:intron 30.0%
TTCAGACAAAATCAATCCTA+CGG + chr3_4:66782441-66782460 None:intergenic 30.0%
ATTAATTCTAACTGGAAGCT+AGG - chr3_4:66782460-66782479 Msa0515530:intron 30.0%
TTAATTCTAACTGGAAGCTA+GGG - chr3_4:66782461-66782480 Msa0515530:CDS 30.0%
AAATGGAAGTGGTTTATGTT+TGG + chr3_4:66782561-66782580 None:intergenic 30.0%
CATTAAGTAACTAAGTTCCT+TGG - chr3_4:66782651-66782670 Msa0515530:intron 30.0%
GTCAGTGACTCATATTATTA+GGG - chr3_4:66782673-66782692 Msa0515530:CDS 30.0%
TCAGTGACTCATATTATTAG+GGG - chr3_4:66782674-66782693 Msa0515530:CDS 30.0%
TGTTAATGGAACACTAAAAC+CGG + chr3_4:66782769-66782788 None:intergenic 30.0%
ACGATACACTATAAATTGTC+TGG - chr3_4:66782833-66782852 Msa0515530:intron 30.0%
! TGTCATATGATTTGTAGCAT+AGG - chr3_4:66783301-66783320 Msa0515530:intron 30.0%
TTCAAATCTTAAGCTACCAT+TGG + chr3_4:66783452-66783471 None:intergenic 30.0%
!! TTTGAAGTTGAGTTGAAACA+TGG - chr3_4:66783466-66783485 Msa0515530:intron 30.0%
TAATGAATACATACCAGCAT+TGG + chr3_4:66783494-66783513 None:intergenic 30.0%
TTATATCTGAATATTGCTCG+TGG - chr3_4:66783522-66783541 Msa0515530:intron 30.0%
GAAGTTTCAATGCATTTACA+AGG + chr3_4:66783577-66783596 None:intergenic 30.0%
AATATTTGTCTTTGATTGGC+TGG + chr3_4:66783601-66783620 None:intergenic 30.0%
CCTGAATATTTGTCTTTGAT+TGG + chr3_4:66783605-66783624 None:intergenic 30.0%
CCAATCAAAGACAAATATTC+AGG - chr3_4:66783602-66783621 Msa0515530:intron 30.0%
ATCAATCTTGAAGTCAAAGT+AGG + chr3_4:66783688-66783707 None:intergenic 30.0%
! ACCATTTTCTTTGAATCTTC+AGG - chr3_4:66783740-66783759 Msa0515530:intron 30.0%
TCCTGAAGATTCAAAGAAAA+TGG + chr3_4:66783744-66783763 None:intergenic 30.0%
! CCATATTTCATGGGAATTTT+TGG + chr3_4:66783777-66783796 None:intergenic 30.0%
CCAAAAATTCCCATGAAATA+TGG - chr3_4:66783774-66783793 Msa0515530:intron 30.0%
TCTACTCTTCCATATTTCAT+GGG + chr3_4:66783786-66783805 None:intergenic 30.0%
! TTAGATATATGGGTTTTACC+AGG + chr3_4:66783849-66783868 None:intergenic 30.0%
TGGATAAGCTACTGTTAATT+TGG - chr3_4:66783930-66783949 Msa0515530:intron 30.0%
GGATAAGCTACTGTTAATTT+GGG - chr3_4:66783931-66783950 Msa0515530:intron 30.0%
AACAGTTAGCCATATAGAAA+TGG - chr3_4:66784002-66784021 Msa0515530:intron 30.0%
!!! TGATGATATGATGCCTTTTT+TGG - chr3_4:66784082-66784101 Msa0515530:intron 30.0%
!!! TATGATGCCTTTTTTGGTTT+TGG - chr3_4:66784088-66784107 Msa0515530:intron 30.0%
AACCAAACCAAAACCAAAAA+AGG + chr3_4:66784098-66784117 None:intergenic 30.0%
TCCAATGTAAACAAGCAATT+TGG - chr3_4:66784131-66784150 Msa0515530:intron 30.0%
TCCAAATTGCTTGTTTACAT+TGG + chr3_4:66784135-66784154 None:intergenic 30.0%
CAATTTGGACAGGTTTAATT+TGG - chr3_4:66784146-66784165 Msa0515530:intron 30.0%
CCGAAAAAACTAGTAAACTA+GGG + chr3_4:66784207-66784226 None:intergenic 30.0%
!!! CCCTAGTTTACTAGTTTTTT+CGG - chr3_4:66784204-66784223 Msa0515530:intron 30.0%
ACCGAAAAAACTAGTAAACT+AGG + chr3_4:66784208-66784227 None:intergenic 30.0%
TATCATGTTATTGTATCTGC+AGG - chr3_4:66784414-66784433 Msa0515530:intron 30.0%
TTAATAGCTTGAGGGTAAAA+AGG + chr3_4:66784538-66784557 None:intergenic 30.0%
! TAGTTTGAAGCTATAGATGA+TGG - chr3_4:66784648-66784667 Msa0515530:intron 30.0%
!! ATGACTTGAAGGTGTTATAA+GGG + chr3_4:66784716-66784735 None:intergenic 30.0%
!! AATGACTTGAAGGTGTTATA+AGG + chr3_4:66784717-66784736 None:intergenic 30.0%
TATAACACCTTCAAGTCATT+TGG - chr3_4:66784717-66784736 Msa0515530:intron 30.0%
AGAAACTTATAATGAGATGG+AGG - chr3_4:66785184-66785203 Msa0515530:intron 30.0%
GAAACTTATAATGAGATGGA+GGG - chr3_4:66785185-66785204 Msa0515530:intron 30.0%
! TGATGATGATTTCTTGATGA+TGG + chr3_4:66785235-66785254 None:intergenic 30.0%
! CCACTTATAAACACATTTTC+AGG + chr3_4:66785466-66785485 None:intergenic 30.0%
CCTGAAAATGTGTTTATAAG+TGG - chr3_4:66785463-66785482 Msa0515530:intron 30.0%
TTTCTCATTCTACAGAAAGA+TGG - chr3_4:66785814-66785833 Msa0515530:intron 30.0%
TTCTCATTCTACAGAAAGAT+GGG - chr3_4:66785815-66785834 Msa0515530:intron 30.0%
!! TTTGATTATTTTGTTGGGAG+GGG - chr3_4:66785926-66785945 Msa0515530:intron 30.0%
! GGGTGATTTTATAACAGTAT+AGG - chr3_4:66785952-66785971 Msa0515530:intron 30.0%
ACAGGACATCAAAGAAAAAA+AGG - chr3_4:66786036-66786055 Msa0515530:intron 30.0%
! ATTCAGCAATTTTACCTTGA+AGG + chr3_4:66786113-66786132 None:intergenic 30.0%
!! CTGTTTTGTGCATTTTTAGA+TGG - chr3_4:66786334-66786353 Msa0515530:intron 30.0%
ATGCAGACATGAAAAAGAAA+AGG + chr3_4:66786419-66786438 None:intergenic 30.0%
! TTCATTTTCTTGATGCTTGT+TGG - chr3_4:66786628-66786647 Msa0515530:intron 30.0%
!! AAGAAGCTATTTTCAAATCG+TGG - chr3_4:66786793-66786812 Msa0515530:intron 30.0%
!! AGAAGCTATTTTCAAATCGT+GGG - chr3_4:66786794-66786813 Msa0515530:intron 30.0%
! CATAATTGTTATTGCTGCTT+TGG - chr3_4:66786999-66787018 Msa0515530:intron 30.0%
!!! GCTATTTTGACATATCTGTT+TGG - chr3_4:66787021-66787040 Msa0515530:intron 30.0%
GAAATTCACTACAAGTGAAT+CGG - chr3_4:66787068-66787087 Msa0515530:intron 30.0%
AAAAACAAATACTCCACTAC+TGG - chr3_4:66787220-66787239 Msa0515530:CDS 30.0%
! AGTATAAATGTAGGGGTATA+TGG + chr3_4:66787314-66787333 None:intergenic 30.0%
! GATTTTCTTCTTACTTGTAG+GGG + chr3_4:66787341-66787360 None:intergenic 30.0%
! GAGATTTTCTTCTTACTTGT+AGG + chr3_4:66787343-66787362 None:intergenic 30.0%
GCTGAAATCCAATGATATAA+AGG + chr3_4:66787374-66787393 None:intergenic 30.0%
CAGAAAAATTGAAATGGTGA+AGG + chr3_4:66787431-66787450 None:intergenic 30.0%
ATTCGTAGATGCAAAATTGA+AGG + chr3_4:66787516-66787535 None:intergenic 30.0%
TACAACACGGAAAAGAATAA+TGG - chr3_4:66787546-66787565 Msa0515530:five_prime_UTR 30.0%
ATGCAAGTATGAGTAGAAGA+TGG + chr3_4:66781118-66781137 None:intergenic 35.0%
!! AAAAGTATTGGGTAGATGAG+TGG - chr3_4:66781179-66781198 Msa0515530:three_prime_UTR 35.0%
GTACTTGAGATTCAAGTGTT+TGG + chr3_4:66781216-66781235 None:intergenic 35.0%
AATGACTCTTGGGAATAAGA+TGG - chr3_4:66781241-66781260 Msa0515530:three_prime_UTR 35.0%
ATGACTCTTGGGAATAAGAT+GGG - chr3_4:66781242-66781261 Msa0515530:three_prime_UTR 35.0%
!! TGTGTTTTGGATGATAATCC+TGG + chr3_4:66781365-66781384 None:intergenic 35.0%
GGATTATCATCCAAAACACA+AGG - chr3_4:66781365-66781384 Msa0515530:three_prime_UTR 35.0%
! CTTTTCTTCTCCTTGTGTTT+TGG + chr3_4:66781378-66781397 None:intergenic 35.0%
TGAAAATGAGAAGAACGAAC+GGG + chr3_4:66781583-66781602 None:intergenic 35.0%
TTCTCACATCTTTCTCAATC+AGG - chr3_4:66781662-66781681 Msa0515530:three_prime_UTR 35.0%
GTTTGTGTTAATTGCGTTTG+CGG - chr3_4:66781746-66781765 Msa0515530:CDS 35.0%
! TAAGTTCTGTCATCCTCTTT+TGG - chr3_4:66781887-66781906 Msa0515530:intron 35.0%
GCACTGAAAATTACCAAAAG+AGG + chr3_4:66781903-66781922 None:intergenic 35.0%
! GATTTAGCGTTTTCTTTGTC+TGG - chr3_4:66781976-66781995 Msa0515530:intron 35.0%
TTATTAGGGTCTGTTTGGAT+TGG + chr3_4:66782309-66782328 None:intergenic 35.0%
CAAGATTATTAGGGTCTGTT+TGG + chr3_4:66782314-66782333 None:intergenic 35.0%
! CTCTTAACGTATTTTCACCT+TGG + chr3_4:66782341-66782360 None:intergenic 35.0%
AAAAGTGAGCTAAATGGAAG+TGG + chr3_4:66782572-66782591 None:intergenic 35.0%
GCCGATGACAAAAATTGATT+TGG + chr3_4:66782613-66782632 None:intergenic 35.0%
ATAATATGAGTCACTGACCA+AGG + chr3_4:66782671-66782690 None:intergenic 35.0%
GGTCAGTGACTCATATTATT+AGG - chr3_4:66782672-66782691 Msa0515530:CDS 35.0%
!! TTCTTTGCACTAGTCTTTGT+AGG + chr3_4:66782868-66782887 None:intergenic 35.0%
! CAACTCAGAGTTTGATAACT+AGG + chr3_4:66783248-66783267 None:intergenic 35.0%
ATATACCAGCCACATATAGA+TGG - chr3_4:66783273-66783292 Msa0515530:intron 35.0%
TTCTATGTGACAGATTCGTT+TGG - chr3_4:66783366-66783385 Msa0515530:intron 35.0%
TCTATGTGACAGATTCGTTT+GGG - chr3_4:66783367-66783386 Msa0515530:intron 35.0%
TTCTTATGAGCTGCAATTTC+AGG - chr3_4:66783551-66783570 Msa0515530:intron 35.0%
TTGAAGTCAAAGTAGGACTT+AGG + chr3_4:66783681-66783700 None:intergenic 35.0%
GTCTACTCTTCCATATTTCA+TGG + chr3_4:66783787-66783806 None:intergenic 35.0%
AATTTCTTCTTTGCCTCTGT+AGG - chr3_4:66783891-66783910 Msa0515530:intron 35.0%
!!! TGCCTTTTTTGGTTTTGGTT+TGG - chr3_4:66784093-66784112 Msa0515530:intron 35.0%
TGTAAACAAGCAATTTGGAC+AGG - chr3_4:66784136-66784155 Msa0515530:intron 35.0%
AACAACCCAGAAATCGAAAA+CGG + chr3_4:66784172-66784191 None:intergenic 35.0%
! AATACCCTGTGTTTTCCATA+AGG - chr3_4:66784346-66784365 Msa0515530:intron 35.0%
CAGGAAATTGTTGCATTATC+TGG - chr3_4:66784433-66784452 Msa0515530:CDS 35.0%
CAAACCTGAGACTAAATACA+CGG - chr3_4:66784501-66784520 Msa0515530:intron 35.0%
TATACCGTGTATTTAGTCTC+AGG + chr3_4:66784508-66784527 None:intergenic 35.0%
ACACTTATTACTGAGACAGA+AGG + chr3_4:66784911-66784930 None:intergenic 35.0%
GGTAATATCTCATCGAATGT+GGG + chr3_4:66785445-66785464 None:intergenic 35.0%
AGGTAATATCTCATCGAATG+TGG + chr3_4:66785446-66785465 None:intergenic 35.0%
!! GTACTCCTAATTTTAGAAGC+CGG - chr3_4:66785485-66785504 Msa0515530:intron 35.0%
!! CAAAACCGGCTTCTAAAATT+AGG + chr3_4:66785493-66785512 None:intergenic 35.0%
!! ATTTTAGAAGCCGGTTTTGT+AGG - chr3_4:66785494-66785513 Msa0515530:intron 35.0%
!! TTTTAGAAGCCGGTTTTGTA+GGG - chr3_4:66785495-66785514 Msa0515530:intron 35.0%
AAGTAAACTGAAGTAAGCCA+TGG + chr3_4:66785598-66785617 None:intergenic 35.0%
GAAGATACACAAAACTTGAC+AGG + chr3_4:66785712-66785731 None:intergenic 35.0%
GTTTGACAACTCTTACTTCA+AGG - chr3_4:66785882-66785901 Msa0515530:intron 35.0%
! AGCAATTTTACCTTGAAGGA+AGG + chr3_4:66786109-66786128 None:intergenic 35.0%
TGAGAAATATGCTGTAGATC+AGG - chr3_4:66786218-66786237 Msa0515530:intron 35.0%
! GTTCATTGTTTCTCTATTCC+TGG - chr3_4:66786708-66786727 Msa0515530:intron 35.0%
ATGCTATGAGGAAGAAGATA+CGG - chr3_4:66786911-66786930 Msa0515530:CDS 35.0%
!! TTGACTTTAGAGCCTTATCT+GGG + chr3_4:66786963-66786982 None:intergenic 35.0%
!! TTTGACTTTAGAGCCTTATC+TGG + chr3_4:66786964-66786983 None:intergenic 35.0%
CATTAATACGCAAATGCCAA+AGG + chr3_4:66787118-66787137 None:intergenic 35.0%
GTATAATTTCCTTAGTCCTC+TGG + chr3_4:66787292-66787311 None:intergenic 35.0%
! GGGTGAAAGTATAAATGTAG+GGG + chr3_4:66787321-66787340 None:intergenic 35.0%
! GGGGTGAAAGTATAAATGTA+GGG + chr3_4:66787322-66787341 None:intergenic 35.0%
! AGGGGTGAAAGTATAAATGT+AGG + chr3_4:66787323-66787342 None:intergenic 35.0%
AATTGAAATGGTGAAGGAGA+AGG + chr3_4:66787425-66787444 None:intergenic 35.0%
GTAGATGCAAAATTGAAGGA+AGG + chr3_4:66787512-66787531 None:intergenic 35.0%
AGATGGGTCAAGTATAAGGT+AGG - chr3_4:66781258-66781277 Msa0515530:three_prime_UTR 40.0%
GTCAAGTATAAGGTAGGACT+AGG - chr3_4:66781264-66781283 Msa0515530:three_prime_UTR 40.0%
AAACCTACACAAGCATATCG+TGG - chr3_4:66781297-66781316 Msa0515530:three_prime_UTR 40.0%
AATCCACGATATGCTTGTGT+AGG + chr3_4:66781303-66781322 None:intergenic 40.0%
!!! GAGTTTTGATTGGCAAATCC+AGG - chr3_4:66781344-66781363 Msa0515530:three_prime_UTR 40.0%
AGAAAGATGTGAGAAATGCG+AGG + chr3_4:66781657-66781676 None:intergenic 40.0%
AAGCGCTAGAGAAGATATCA+AGG - chr3_4:66781851-66781870 Msa0515530:CDS 40.0%
GCTTGTTTGAGCTTATCTAC+TGG + chr3_4:66782287-66782306 None:intergenic 40.0%
! ATGTTTGGGTGTTTTTCCGT+AGG - chr3_4:66782422-66782441 Msa0515530:intron 40.0%
TCCATTAACAGTGTCTTTGC+TGG - chr3_4:66782779-66782798 Msa0515530:intron 40.0%
!! GTAATCACATGTGTCGGTTT+CGG + chr3_4:66783043-66783062 None:intergenic 40.0%
GACAAAGCTCCATCTATATG+TGG + chr3_4:66783285-66783304 None:intergenic 40.0%
TCTTTGAATCTTCAGGAAGC+TGG - chr3_4:66783747-66783766 Msa0515530:intron 40.0%
!! TAGGATTCTAGGACATGGAT+TGG - chr3_4:66783910-66783929 Msa0515530:intron 40.0%
TAGCCATATAGAAATGGCTG+TGG - chr3_4:66784008-66784027 Msa0515530:intron 40.0%
CAACCACAGCCATTTCTATA+TGG + chr3_4:66784014-66784033 None:intergenic 40.0%
!! ATTTGGCCGTTTTCGATTTC+TGG - chr3_4:66784163-66784182 Msa0515530:intron 40.0%
!! TTTGGCCGTTTTCGATTTCT+GGG - chr3_4:66784164-66784183 Msa0515530:intron 40.0%
! CGTCAAGTTTTCTACCGAAT+GGG - chr3_4:66784308-66784327 Msa0515530:CDS 40.0%
! GTCAAGTTTTCTACCGAATG+GGG - chr3_4:66784309-66784328 Msa0515530:CDS 40.0%
CCATCCTTATGGAAAACACA+GGG + chr3_4:66784353-66784372 None:intergenic 40.0%
! CCTGTGTTTTCCATAAGGAT+GGG - chr3_4:66784351-66784370 Msa0515530:intron 40.0%
! CTGTGTTTTCCATAAGGATG+GGG - chr3_4:66784352-66784371 Msa0515530:intron 40.0%
! TGTGTTTTCCATAAGGATGG+GGG - chr3_4:66784353-66784372 Msa0515530:intron 40.0%
AATACTTACCCCCATCCTTA+TGG + chr3_4:66784364-66784383 None:intergenic 40.0%
ATAAGGATGGGGGTAAGTAT+TGG - chr3_4:66784363-66784382 Msa0515530:intron 40.0%
TGCTCAACCAAATGACTTGA+AGG + chr3_4:66784727-66784746 None:intergenic 40.0%
! TCGCGTTAGTCTGATAACAT+CGG - chr3_4:66784761-66784780 Msa0515530:intron 40.0%
! AAGAGCGATTGCTCTTTTGT+TGG - chr3_4:66784855-66784874 Msa0515530:intron 40.0%
! AGAGCGATTGCTCTTTTGTT+GGG - chr3_4:66784856-66784875 Msa0515530:intron 40.0%
TACTGAGACAGAAGGAATCA+AGG + chr3_4:66784903-66784922 None:intergenic 40.0%
TTGTAGTTAGTCGAGTGCTT+AGG + chr3_4:66785073-66785092 None:intergenic 40.0%
!! GATGGAGGGAGTATTACTTT+AGG - chr3_4:66785199-66785218 Msa0515530:intron 40.0%
CATCATCAATGCAACATCTC+TGG - chr3_4:66785253-66785272 Msa0515530:intron 40.0%
CTAACTCAACCCTACAAAAC+CGG + chr3_4:66785507-66785526 None:intergenic 40.0%
AAACTGAAGTAAGCCATGGA+AGG + chr3_4:66785594-66785613 None:intergenic 40.0%
! GTTTTGTGTATCTTCAGAGC+TGG - chr3_4:66785717-66785736 Msa0515530:intron 40.0%
!! ATTATTTTGTTGGGAGGGGA+GGG - chr3_4:66785930-66785949 Msa0515530:intron 40.0%
TAACAGTATAGGAAGGGAAG+AGG - chr3_4:66785963-66785982 Msa0515530:intron 40.0%
TCAAAAAGAGCAGCATCAGT+TGG + chr3_4:66786082-66786101 None:intergenic 40.0%
! TTTTGACGATCCTTCCTTCA+AGG - chr3_4:66786096-66786115 Msa0515530:intron 40.0%
!!! ATCTGTTTTTCAGGGCATTG+TGG - chr3_4:66786509-66786528 Msa0515530:intron 40.0%
AGATGGTTCTCCAAATGTAG+TGG - chr3_4:66786533-66786552 Msa0515530:intron 40.0%
GATGGTTCTCCAAATGTAGT+GGG - chr3_4:66786534-66786553 Msa0515530:intron 40.0%
AACTTCTCTCCCACTACATT+TGG + chr3_4:66786546-66786565 None:intergenic 40.0%
AACCTTTCCAGAGGAGTAAT+TGG + chr3_4:66786577-66786596 None:intergenic 40.0%
CAAGCTTAAAACCTTTCCAG+AGG + chr3_4:66786586-66786605 None:intergenic 40.0%
! TTTTACTCCTGCATCAAACC+AGG + chr3_4:66786729-66786748 None:intergenic 40.0%
TGCTATGAGGAAGAAGATAC+GGG - chr3_4:66786912-66786931 Msa0515530:CDS 40.0%
CTGGAGAGTTGGAACAATTA+CGG - chr3_4:66787239-66787258 Msa0515530:CDS 40.0%
TGGAGAGTTGGAACAATTAC+GGG - chr3_4:66787240-66787259 Msa0515530:CDS 40.0%
! TGGAACAATTACGGGTTTTC+TGG - chr3_4:66787248-66787267 Msa0515530:CDS 40.0%
AAACAATGTGATAGAGCCAG+AGG - chr3_4:66787273-66787292 Msa0515530:CDS 40.0%
! AGAGATGGAATCAGCTTTGT+GGG + chr3_4:66787397-66787416 None:intergenic 40.0%
ACTCTCTTCACCAACCACAA+TGG - chr3_4:66781485-66781504 Msa0515530:three_prime_UTR 45.0%
GTGATTGTAGCCATTGTGGT+TGG + chr3_4:66781498-66781517 None:intergenic 45.0%
ACCACAATGGCTACAATCAC+CGG - chr3_4:66781498-66781517 Msa0515530:three_prime_UTR 45.0%
AAATGAGAAGAACGAACGGG+AGG + chr3_4:66781580-66781599 None:intergenic 45.0%
CAAGCAATTGAGCGAGGAAA+CGG + chr3_4:66781625-66781644 None:intergenic 45.0%
!! TTTGCGGTTTTTCAGCGAAG+AGG - chr3_4:66781762-66781781 Msa0515530:CDS 45.0%
! CTAGCGCTTTTCAACTGATC+AGG + chr3_4:66781840-66781859 None:intergenic 45.0%
GCCAGCAAAGACACTGTTAA+TGG + chr3_4:66782783-66782802 None:intergenic 45.0%
!! TAACAAAGGCGTCGACTTGT+CGG - chr3_4:66783089-66783108 Msa0515530:intron 45.0%
AAGCTCCATCTATATGTGGC+TGG + chr3_4:66783281-66783300 None:intergenic 45.0%
TGTGACAGATTCGTTTGGGA+TGG - chr3_4:66783371-66783390 Msa0515530:intron 45.0%
TTGAAACATGGAGCCAATGC+TGG - chr3_4:66783478-66783497 Msa0515530:intron 45.0%
TTGAATCTTCAGGAAGCTGG+AGG - chr3_4:66783750-66783769 Msa0515530:intron 45.0%
TATGGAAGAGTAGACGTCAC+TGG - chr3_4:66783792-66783811 Msa0515530:intron 45.0%
CTGAACAATGCCCTGAAGAA+GGG - chr3_4:66783817-66783836 Msa0515530:intron 45.0%
CTTTGCCTCTGTAGGATTCT+AGG - chr3_4:66783899-66783918 Msa0515530:intron 45.0%
CATGTCCTAGAATCCTACAG+AGG + chr3_4:66783907-66783926 None:intergenic 45.0%
!! CTCTGTAGGATTCTAGGACA+TGG - chr3_4:66783905-66783924 Msa0515530:intron 45.0%
! GCGTCAAGTTTTCTACCGAA+TGG - chr3_4:66784307-66784326 Msa0515530:CDS 45.0%
CCTTGTCATTCAACCCCATT+CGG + chr3_4:66784325-66784344 None:intergenic 45.0%
! CCCTGTGTTTTCCATAAGGA+TGG - chr3_4:66784350-66784369 Msa0515530:intron 45.0%
CCCATCCTTATGGAAAACAC+AGG + chr3_4:66784354-66784373 None:intergenic 45.0%
TAGTTAGTCGAGTGCTTAGG+CGG + chr3_4:66785070-66785089 None:intergenic 45.0%
CCATACAAAACCAGCTTGTG+AGG + chr3_4:66785287-66785306 None:intergenic 45.0%
!!! CCTCACAAGCTGGTTTTGTA+TGG - chr3_4:66785284-66785303 Msa0515530:CDS 45.0%
AGAACCTTCCTAACAACCGT+TGG - chr3_4:66785343-66785362 Msa0515530:CDS 45.0%
GAACCTTCCTAACAACCGTT+GGG - chr3_4:66785344-66785363 Msa0515530:CDS 45.0%
CCATGGAAGGTCTACACAAA+CGG + chr3_4:66785581-66785600 None:intergenic 45.0%
ATTCTACAGAAAGATGGGCC+AGG - chr3_4:66785820-66785839 Msa0515530:intron 45.0%
CTTTAACCATTGTGCAGTCC+AGG + chr3_4:66785863-66785882 None:intergenic 45.0%
!! GATTATTTTGTTGGGAGGGG+AGG - chr3_4:66785929-66785948 Msa0515530:intron 45.0%
!! TTATTTTGTTGGGAGGGGAG+GGG - chr3_4:66785931-66785950 Msa0515530:intron 45.0%
CAGGTTCAAACTTTGCTCCA+AGG + chr3_4:66786290-66786309 None:intergenic 45.0%
AGCAAAGTTTGAACCTGCAG+AGG - chr3_4:66786293-66786312 Msa0515530:intron 45.0%
!! TTTCAGGGCATTGTGGTAGA+TGG - chr3_4:66786516-66786535 Msa0515530:intron 45.0%
! AGCCAATTACTCCTCTGGAA+AGG - chr3_4:66786572-66786591 Msa0515530:intron 45.0%
! CTCTATTCCTGGTTTGATGC+AGG - chr3_4:66786719-66786738 Msa0515530:intron 45.0%
AAGAGCTGTCTGATGCTATG+AGG - chr3_4:66786899-66786918 Msa0515530:CDS 45.0%
! GAAGATACGGGCTGAATATG+AGG - chr3_4:66786924-66786943 Msa0515530:CDS 45.0%
ATACTCCACTACTGGAGAGT+TGG - chr3_4:66787228-66787247 Msa0515530:CDS 45.0%
TTGTTCCAACTCTCCAGTAG+TGG + chr3_4:66787236-66787255 None:intergenic 45.0%
! GAGATGGAATCAGCTTTGTG+GGG + chr3_4:66787396-66787415 None:intergenic 45.0%
GAGAGATGGAATCAGCTTTG+TGG + chr3_4:66787398-66787417 None:intergenic 45.0%
AAGGAGAAGGAAGAGAGAGA+TGG + chr3_4:66787412-66787431 None:intergenic 45.0%
!!! AATTTTTTTAAAATTAACAA+AGG - chr3_4:66783075-66783094 Msa0515530:intron 5.0%
!! ATTATATATAATTTAATGAA+AGG - chr3_4:66786657-66786676 Msa0515530:intron 5.0%
!! GTGGTTGGTGAAGAGAGTGA+AGG + chr3_4:66781483-66781502 None:intergenic 50.0%
ATTGAGCGAGGAAACGGAAC+TGG + chr3_4:66781619-66781638 None:intergenic 50.0%
AGAACGCAAGCAATTGAGCG+AGG + chr3_4:66781631-66781650 None:intergenic 50.0%
AGGAGAAGTTCGTGCTTCGA+GGG - chr3_4:66781782-66781801 Msa0515530:CDS 50.0%
GTTAGCTAGTGCTACAGCTG+TGG - chr3_4:66783649-66783668 Msa0515530:intron 50.0%
!! CCTTCTTCAGGGCATTGTTC+AGG + chr3_4:66783819-66783838 None:intergenic 50.0%
CCTGAACAATGCCCTGAAGA+AGG - chr3_4:66783816-66783835 Msa0515530:intron 50.0%
CAGGAAGTCTCCCTTCTTCA+GGG + chr3_4:66783830-66783849 None:intergenic 50.0%
AAATGATCCGCAGGTGAAGG+GGG + chr3_4:66784287-66784306 None:intergenic 50.0%
CAAATGATCCGCAGGTGAAG+GGG + chr3_4:66784288-66784307 None:intergenic 50.0%
GCAAATGATCCGCAGGTGAA+GGG + chr3_4:66784289-66784308 None:intergenic 50.0%
ACTTGACGCAAATGATCCGC+AGG + chr3_4:66784296-66784315 None:intergenic 50.0%
CCGAATGGGGTTGAATGACA+AGG - chr3_4:66784322-66784341 Msa0515530:intron 50.0%
ATTATCTGGTGCGCACACAC+TGG - chr3_4:66784447-66784466 Msa0515530:CDS 50.0%
TTATCTGGTGCGCACACACT+GGG - chr3_4:66784448-66784467 Msa0515530:CDS 50.0%
TAACATCGGTCTCTGCTGAG+AGG - chr3_4:66784775-66784794 Msa0515530:intron 50.0%
AGTTAGTCGAGTGCTTAGGC+GGG + chr3_4:66785069-66785088 None:intergenic 50.0%
CCGTTTGTGTAGACCTTCCA+TGG - chr3_4:66785578-66785597 Msa0515530:intron 50.0%
GACAATCCTGGACTGCACAA+TGG - chr3_4:66785854-66785873 Msa0515530:intron 50.0%
! TATTTTGTTGGGAGGGGAGG+GGG - chr3_4:66785932-66785951 Msa0515530:intron 50.0%
GTATAGGAAGGGAAGAGGAG+AGG - chr3_4:66785968-66785987 Msa0515530:intron 50.0%
CATGCCAAACTCAGCAACCT+TGG - chr3_4:66786270-66786289 Msa0515530:intron 50.0%
TGCTCCAAGGTTGCTGAGTT+TGG + chr3_4:66786277-66786296 None:intergenic 50.0%
GTAGCAGCCAATTACTCCTC+TGG - chr3_4:66786567-66786586 Msa0515530:intron 50.0%
! GATACGGGCTGAATATGAGG+CGG - chr3_4:66786927-66786946 Msa0515530:CDS 50.0%
GTGATAGAGCCAGAGGACTA+AGG - chr3_4:66787280-66787299 Msa0515530:CDS 50.0%
GCCGGTGATTGTAGCCATTG+TGG + chr3_4:66781502-66781521 None:intergenic 55.0%
ACGGGAGGTTGAGAGTGAGA+CGG + chr3_4:66781565-66781584 None:intergenic 55.0%
GAGGAGAAGTTCGTGCTTCG+AGG - chr3_4:66781781-66781800 Msa0515530:CDS 55.0%
GGAGAAGTTCGTGCTTCGAG+GGG - chr3_4:66781783-66781802 Msa0515530:CDS 55.0%
! TTCGAGGGGACGATTCGGAA+CGG - chr3_4:66781797-66781816 Msa0515530:CDS 55.0%
! CGTTTGGGATGGCATGATGC+TGG - chr3_4:66783382-66783401 Msa0515530:intron 55.0%
ATTGAGGAGTGGCCACAGAG+AGG - chr3_4:66783421-66783440 Msa0515530:intron 55.0%
AGCTAGTGCTACAGCTGTGG+AGG - chr3_4:66783652-66783671 Msa0515530:intron 55.0%
CCAGGAAGTCTCCCTTCTTC+AGG + chr3_4:66783831-66783850 None:intergenic 55.0%
CCTGAAGAAGGGAGACTTCC+TGG - chr3_4:66783828-66783847 Msa0515530:intron 55.0%
AATGATCCGCAGGTGAAGGG+GGG + chr3_4:66784286-66784305 None:intergenic 55.0%
CGCAAATGATCCGCAGGTGA+AGG + chr3_4:66784290-66784309 None:intergenic 55.0%
TATCTGGTGCGCACACACTG+GGG - chr3_4:66784449-66784468 Msa0515530:CDS 55.0%
TGGCCCAACGGTTGTTAGGA+AGG + chr3_4:66785350-66785369 None:intergenic 55.0%
TCCAGATGTCACGTCCTCCT+GGG - chr3_4:66785397-66785416 Msa0515530:intron 55.0%
CAACGTGAACAGACCTCTGC+AGG + chr3_4:66786309-66786328 None:intergenic 55.0%
GCTGAATATGAGGCGGTTGG+CGG - chr3_4:66786934-66786953 Msa0515530:CDS 55.0%
TGAGAGTGAGACGGTGGCTC+TGG + chr3_4:66781556-66781575 None:intergenic 60.0%
GGAGGTTGAGAGTGAGACGG+TGG + chr3_4:66781562-66781581 None:intergenic 60.0%
CGTGCTTCGAGGGGACGATT+CGG - chr3_4:66781792-66781811 Msa0515530:CDS 60.0%
! GCACCGACACCTCTGATCGA+AGG - chr3_4:66783006-66783025 Msa0515530:intron 60.0%
! GCGCCTTCGATCAGAGGTGT+CGG + chr3_4:66783012-66783031 None:intergenic 60.0%
!! CCATTGGCTCCACCTCTCTG+TGG + chr3_4:66783436-66783455 None:intergenic 60.0%
CCACAGAGAGGTGGAGCCAA+TGG - chr3_4:66783433-66783452 Msa0515530:intron 60.0%
TAGACCAGACCGCAGTGGCT+GGG - chr3_4:66784477-66784496 Msa0515530:CDS 60.0%
GGTCTCTGCTGAGAGGCTTG+TGG - chr3_4:66784782-66784801 Msa0515530:intron 60.0%
GGTGTGCAGTCCTCACAAGC+TGG - chr3_4:66785274-66785293 Msa0515530:intron 60.0%
TGGGTGGCCCAACGGTTGTT+AGG + chr3_4:66785354-66785373 None:intergenic 60.0%
CTCCAGATGTCACGTCCTCC+TGG - chr3_4:66785396-66785415 Msa0515530:intron 60.0%
!! AAAGATGGGCCAGGAGCACC+TGG - chr3_4:66785829-66785848 Msa0515530:intron 60.0%
!! AAGATGGGCCAGGAGCACCT+GGG - chr3_4:66785830-66785849 Msa0515530:intron 60.0%
CGGGCTGAATATGAGGCGGT+TGG - chr3_4:66786931-66786950 Msa0515530:CDS 60.0%
GGTTGGCGGAAGCCCAGATA+AGG - chr3_4:66786948-66786967 Msa0515530:CDS 60.0%
GGAGGGAATCATGCGTGCGG+CGG + chr3_4:66781529-66781548 None:intergenic 65.0%
GGCGGAGGGAATCATGCGTG+CGG + chr3_4:66781532-66781551 None:intergenic 65.0%
!! TGAGACGGTGGCTCTGGTGG+CGG + chr3_4:66781550-66781569 None:intergenic 65.0%
!! GAGTGAGACGGTGGCTCTGG+TGG + chr3_4:66781553-66781572 None:intergenic 65.0%
! ACCTCTGATCGAAGGCGCGC+TGG - chr3_4:66783014-66783033 Msa0515530:intron 65.0%
ACCAGCGCGCCTTCGATCAG+AGG + chr3_4:66783018-66783037 None:intergenic 65.0%
GAGGAGTGGCCACAGAGAGG+TGG - chr3_4:66783424-66783443 Msa0515530:intron 65.0%
CGGTCTAGACCAGACCGCAG+TGG - chr3_4:66784472-66784491 Msa0515530:CDS 65.0%
CTAGACCAGACCGCAGTGGC+TGG - chr3_4:66784476-66784495 Msa0515530:CDS 65.0%
AGACCAGACCGCAGTGGCTG+GGG - chr3_4:66784478-66784497 Msa0515530:CDS 65.0%
CAGGTTTGCCCCAGCCACTG+CGG + chr3_4:66784489-66784508 None:intergenic 65.0%
CTCGATCGTGGGTGGCCCAA+CGG + chr3_4:66785362-66785381 None:intergenic 65.0%
CCACCCACGATCGAGCCACT+CGG - chr3_4:66785367-66785386 Msa0515530:CDS 65.0%
CACCCACGATCGAGCCACTC+GGG - chr3_4:66785368-66785387 Msa0515530:CDS 65.0%
GTCCCGAGTGGCTCGATCGT+GGG + chr3_4:66785373-66785392 None:intergenic 65.0%
TGTCCCGAGTGGCTCGATCG+TGG + chr3_4:66785374-66785393 None:intergenic 65.0%
! CATCTGGAGCGTGTCCCGAG+TGG + chr3_4:66785385-66785404 None:intergenic 65.0%
GCCCAGGAGGACGTGACATC+TGG + chr3_4:66785401-66785420 None:intergenic 65.0%
ATGTCACGTCCTCCTGGGCG+TGG - chr3_4:66785402-66785421 Msa0515530:intron 65.0%
TGTCACGTCCTCCTGGGCGT+GGG - chr3_4:66785403-66785422 Msa0515530:intron 65.0%
!! AGATGGGCCAGGAGCACCTG+GGG - chr3_4:66785831-66785850 Msa0515530:intron 65.0%
GATTGTCCCCCAGGTGCTCC+TGG + chr3_4:66785841-66785860 None:intergenic 65.0%
GAGCACCTGGGGGACAATCC+TGG - chr3_4:66785842-66785861 Msa0515530:intron 65.0%
GCAGTCCAGGATTGTCCCCC+AGG + chr3_4:66785850-66785869 None:intergenic 65.0%
GGGAATCATGCGTGCGGCGG+CGG + chr3_4:66781526-66781545 None:intergenic 70.0%
!! ACGGTGGCTCTGGTGGCGGA+GGG + chr3_4:66781546-66781565 None:intergenic 70.0%
TGCTGGCCCCCCTTCACCTG+CGG - chr3_4:66784277-66784296 Msa0515530:CDS 70.0%
CTGGTGCGCACACACTGGGG+CGG - chr3_4:66784452-66784471 Msa0515530:CDS 70.0%
TTGCCCCAGCCACTGCGGTC+TGG + chr3_4:66784484-66784503 None:intergenic 70.0%
CCGAGTGGCTCGATCGTGGG+TGG + chr3_4:66785370-66785389 None:intergenic 70.0%
GTCACGTCCTCCTGGGCGTG+GGG - chr3_4:66785404-66785423 Msa0515530:intron 70.0%
CACACTTCCCCACGCCCAGG+AGG + chr3_4:66785414-66785433 None:intergenic 70.0%
CTGCACACTTCCCCACGCCC+AGG + chr3_4:66785417-66785436 None:intergenic 70.0%
!! GATGGGCCAGGAGCACCTGG+GGG - chr3_4:66785832-66785851 Msa0515530:intron 70.0%
!! GACGGTGGCTCTGGTGGCGG+AGG + chr3_4:66781547-66781566 None:intergenic 75.0%
! CATGCGTGCGGCGGCGGCGC+CGG + chr3_4:66781520-66781539 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 66781094 66787681 66781094 ID=Msa0515530;Name=Msa0515530
chr3_4 mRNA 66781094 66787681 66781094 ID=Msa0515530-mRNA-1;Parent=Msa0515530;Name=Msa0515530-mRNA-1;_AED=0.07;_eAED=0.07;_QI=362|1|1|1|1|1|12|631|435
chr3_4 exon 66781094 66781877 66781094 ID=Msa0515530-mRNA-1:exon:17250;Parent=Msa0515530-mRNA-1
chr3_4 exon 66782182 66782253 66782182 ID=Msa0515530-mRNA-1:exon:17249;Parent=Msa0515530-mRNA-1
chr3_4 exon 66782461 66782565 66782461 ID=Msa0515530-mRNA-1:exon:17248;Parent=Msa0515530-mRNA-1
chr3_4 exon 66782658 66782735 66782658 ID=Msa0515530-mRNA-1:exon:17247;Parent=Msa0515530-mRNA-1
chr3_4 exon 66782872 66782946 66782872 ID=Msa0515530-mRNA-1:exon:17246;Parent=Msa0515530-mRNA-1
chr3_4 exon 66784253 66784339 66784253 ID=Msa0515530-mRNA-1:exon:17245;Parent=Msa0515530-mRNA-1
chr3_4 exon 66784432 66784499 66784432 ID=Msa0515530-mRNA-1:exon:17244;Parent=Msa0515530-mRNA-1
chr3_4 exon 66784926 66785013 66784926 ID=Msa0515530-mRNA-1:exon:17243;Parent=Msa0515530-mRNA-1
chr3_4 exon 66785102 66785202 66785102 ID=Msa0515530-mRNA-1:exon:17242;Parent=Msa0515530-mRNA-1
chr3_4 exon 66785276 66785396 66785276 ID=Msa0515530-mRNA-1:exon:17241;Parent=Msa0515530-mRNA-1
chr3_4 exon 66786867 66786998 66786867 ID=Msa0515530-mRNA-1:exon:17240;Parent=Msa0515530-mRNA-1
chr3_4 exon 66787092 66787681 66787092 ID=Msa0515530-mRNA-1:exon:17239;Parent=Msa0515530-mRNA-1
chr3_4 five_prime_UTR 66787320 66787681 66787320 ID=Msa0515530-mRNA-1:five_prime_utr;Parent=Msa0515530-mRNA-1
chr3_4 CDS 66787092 66787319 66787092 ID=Msa0515530-mRNA-1:cds;Parent=Msa0515530-mRNA-1
chr3_4 CDS 66786867 66786998 66786867 ID=Msa0515530-mRNA-1:cds;Parent=Msa0515530-mRNA-1
chr3_4 CDS 66785276 66785396 66785276 ID=Msa0515530-mRNA-1:cds;Parent=Msa0515530-mRNA-1
chr3_4 CDS 66785102 66785202 66785102 ID=Msa0515530-mRNA-1:cds;Parent=Msa0515530-mRNA-1
chr3_4 CDS 66784926 66785013 66784926 ID=Msa0515530-mRNA-1:cds;Parent=Msa0515530-mRNA-1
chr3_4 CDS 66784432 66784499 66784432 ID=Msa0515530-mRNA-1:cds;Parent=Msa0515530-mRNA-1
chr3_4 CDS 66784253 66784339 66784253 ID=Msa0515530-mRNA-1:cds;Parent=Msa0515530-mRNA-1
chr3_4 CDS 66782872 66782946 66782872 ID=Msa0515530-mRNA-1:cds;Parent=Msa0515530-mRNA-1
chr3_4 CDS 66782658 66782735 66782658 ID=Msa0515530-mRNA-1:cds;Parent=Msa0515530-mRNA-1
chr3_4 CDS 66782461 66782565 66782461 ID=Msa0515530-mRNA-1:cds;Parent=Msa0515530-mRNA-1
chr3_4 CDS 66782182 66782253 66782182 ID=Msa0515530-mRNA-1:cds;Parent=Msa0515530-mRNA-1
chr3_4 CDS 66781725 66781877 66781725 ID=Msa0515530-mRNA-1:cds;Parent=Msa0515530-mRNA-1
chr3_4 three_prime_UTR 66781094 66781724 66781094 ID=Msa0515530-mRNA-1:three_prime_utr;Parent=Msa0515530-mRNA-1
Gene Sequence

>Msa0515530

ATGGCAGAGCGTGTGTTACTCACTCCTTCACTCTCTTCACCAACCACAATGGCTACAATCACCGGCGCCGCCGCCGCACGCATGATTCCCTCCGCCACCAGAGCCACCGTCTCACTCTCAACCTCCCGTTCGTTCTTCTCATTTTCATCGTCATCTTCTTCCAGTTCCGTTTCCTCGCTCAATTGCTTGCGTTCTTCTCCTCGCATTTCTCACATCTTTCTCAATCAGCGAAGAGGAGAAGTTCGTGCTTCGAGGGGACGATTCGGAACGGTTGCGTTTGCGTCTGATCCTGATCAGTTGAAAAGCGCTAGAGAAGATATCAAGGAGCTTCTTAAGACTAAGTTCTGTCATCCTCTTTTGATTCGTTTGGGATGGCATGATGCTGGTACCTATAATAAGAATATTGAGGAGTGGCCACAGAGAGGTGGAGCCAATGGTAGCTTAAGATTTGAAGTTGAGTTGAAACATGGAGCCAATGCTGGCCTTGTAAATGCATTGAAACTTCTCCAGCCAATCAAAGACAAATATTCAGGCGTGACATATGCAGACTTATTTCAGTTAGCTAGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCAAAAATTCCCATGAAATATGGAAGAGTAGACGTCACTGGACCTGAACAATGCCCTGAAGAAGGGAGACTTCCTGATGCTGGCCCCCCTTCACCTGCGGATCATTTGCGTCAAGTTTTCTACCGAATGGGGTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGGGCGGTCTAGACCAGACCGCAGTGGCTGGGGCAAACCTGAGACTAAATACACGAAAGATGGGCCAGGAGCACCTGGGGGACAATCCTGGACTGCACAATGGTTAAAGTTTGACAACTCTTACTTCAAGGACATCAAAGAAAAAAAGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTCTTTTTGACGATCCTTCCTTCAAGGTATATGCTGAGAAATATGCTGTAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTCAGCAACCTTGGAGCAAAGTTTGAACCTGCAGAGGGCATTGTGGTAGATGGTTCTCCAAATGTAGTGGGAGAGAAGTTTGTAGCAGCCAATTACTCCTCTGGAAAGAAAGAGCTGTCTGATGCTATGAGGAAGAAGATACGGGCTGAATATGAGGCGGTTGGCGGAAGCCCAGATAAGGCTCTAAAGTCAAACTATTTCCTAAACATCATAATTGTTATTGCTGCTTTGGCTATTTTGACATATCTGTTTGGAAACTAA
Protein sequence

>Msa0515530

MAERVLLTPSLSSPTTMATITGAAAARMIPSATRATVSLSTSRSFFSFSSSSSSSSVSSLNCLRSSPRISHIFLNQRRGEVRASRGRFGTVAFASDPDQLKSAREDIKELLKTKFCHPLLIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLASATAVEEAGGPKIPMKYGRVDVTGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFDDPSFKVYAEKYAVDQEAFFKDYAEAHAKLSNLGAKFEPAEGIVVDGSPNVVGEKFVAANYSSGKKELSDAMRKKIRAEYEAVGGSPDKALKSNYFLNIIIVIAALAILTYLFGN*