AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0515580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0515580 MtrunA17_Chr3g0124821 97.158 387 10 1 1 386 1 387 0.0 774
Msa0515580 MtrunA17_Chr4g0037131 49.219 256 105 5 99 354 14 244 1.58e-76 240
Msa0515580 MtrunA17_Chr5g0405731 48.473 262 108 6 99 360 13 247 2.25e-75 236
Msa0515580 MtrunA17_Chr4g0030171 45.703 256 113 6 100 354 16 246 4.16e-67 214
Msa0515580 MtrunA17_Chr3g0137751 32.692 312 148 13 55 357 59 317 1.08e-32 125
Msa0515580 MtrunA17_Chr2g0292151 26.996 263 154 7 120 355 63 314 4.26e-17 82.4
Msa0515580 MtrunA17_Chr7g0244461 27.381 252 154 7 120 353 54 294 1.02e-15 77.8
Msa0515580 MtrunA17_Chr4g0013171 29.231 260 141 11 120 353 61 303 7.21e-15 75.1
Msa0515580 MtrunA17_Chr1g0188431 30.000 260 139 12 120 356 73 312 9.61e-15 75.1
Msa0515580 MtrunA17_Chr4g0013721 30.275 218 121 8 179 376 193 399 1.49e-14 75.1
Msa0515580 MtrunA17_Chr3g0124831 100.000 44 0 0 392 435 1 44 2.17e-14 67.0
Msa0515580 MtrunA17_Chr2g0320031 25.632 277 172 8 105 362 45 306 4.14e-14 73.2
Msa0515580 MtrunA17_Chr2g0291751 26.132 287 173 10 97 355 39 314 1.59e-13 71.6
Msa0515580 MtrunA17_Chr5g0438021 25.856 263 146 8 120 353 65 307 4.52e-13 70.1
Msa0515580 MtrunA17_Chr7g0254201 26.335 281 167 9 101 355 30 296 5.38e-13 69.7
Msa0515580 MtrunA17_Chr2g0292181 29.648 199 112 7 179 355 131 323 1.57e-12 68.6
Msa0515580 MtrunA17_Chr2g0292111 26.437 261 154 9 120 353 63 312 1.82e-12 68.6
Msa0515580 MtrunA17_Chr2g0292251 25.954 262 156 8 120 354 62 312 1.96e-12 68.2
Msa0515580 MtrunA17_Chr7g0258811 27.723 202 112 7 177 353 161 353 3.18e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0515580 AT1G77490.1 71.122 419 114 4 19 434 2 416 0.0 597
Msa0515580 AT1G77490.2 71.122 419 114 4 19 434 2 416 0.0 597
Msa0515580 AT4G08390.3 84.420 276 43 0 90 365 96 371 0.0 511
Msa0515580 AT4G08390.2 84.420 276 43 0 90 365 97 372 0.0 511
Msa0515580 AT4G08390.5 84.420 276 43 0 90 365 97 372 0.0 511
Msa0515580 AT4G08390.1 84.420 276 43 0 90 365 97 372 0.0 511
Msa0515580 AT4G08390.4 76.812 276 38 1 90 365 97 346 6.78e-159 452
Msa0515580 AT4G35000.1 50.192 261 103 6 99 359 13 246 6.39e-77 241
Msa0515580 AT3G09640.2 48.235 255 107 5 100 354 17 246 5.67e-70 222
Msa0515580 AT3G09640.1 48.235 255 107 5 100 354 17 246 5.67e-70 222
Msa0515580 AT1G07890.2 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515580 AT1G07890.8 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515580 AT1G07890.4 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515580 AT1G07890.7 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515580 AT1G07890.1 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515580 AT1G07890.3 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515580 AT1G07890.5 47.266 256 109 5 100 354 16 246 5.74e-70 222
Msa0515580 AT1G07890.6 47.266 256 109 5 100 354 16 246 6.97e-70 222
Msa0515580 AT4G35970.1 43.774 265 121 6 99 363 12 248 5.40e-63 205
Msa0515580 AT4G35970.2 42.979 235 108 5 99 333 12 220 4.58e-54 180
Msa0515580 AT4G32320.1 33.230 322 154 13 54 357 48 326 4.06e-35 133
Msa0515580 AT4G33420.1 33.659 205 107 8 170 357 119 311 6.47e-17 82.0
Msa0515580 AT4G33420.2 33.659 205 107 8 170 357 166 358 6.91e-17 82.4
Msa0515580 AT2G18140.1 27.698 278 142 11 120 362 69 322 3.64e-16 79.7
Msa0515580 AT5G66390.1 29.139 302 146 13 103 358 45 324 3.85e-16 79.7
Msa0515580 AT2G22420.1 27.338 278 159 9 104 353 41 303 5.26e-16 79.3
Msa0515580 AT2G18150.1 27.820 266 143 11 120 353 70 318 1.55e-15 77.8
Msa0515580 AT1G14550.1 28.464 267 149 11 120 362 60 308 1.98e-15 77.4
Msa0515580 AT3G28200.1 30.144 209 116 6 165 356 106 301 1.01e-14 75.1
Msa0515580 AT1G24110.1 29.500 200 111 5 179 356 116 307 1.61e-14 74.7
Msa0515580 AT1G49570.1 25.442 283 151 11 120 364 82 342 1.12e-13 72.4
Msa0515580 AT1G14540.1 27.895 190 116 5 179 353 114 297 9.33e-12 66.2

Find 163 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATAGATCAATTTCATTT+TGG 0.115182 3_4:+66847812 None:intergenic
ATATCTGTTTGGAAACTAAT+TGG 0.210656 3_4:-66848367 Msa0515580:exon
AACCTTTCCAGAGGAGTAAT+TGG 0.234989 3_4:+66848825 None:intergenic
CCAGGAAGTCTCCCTTCTTC+AGG 0.253068 3_4:+66851563 None:intergenic
TGCTCCAAGGTTGCTGAGTT+TGG 0.256056 3_4:+66849125 None:intergenic
CTCCTCAATATTCTTATTAT+AGG 0.258901 3_4:+66851984 None:intergenic
GTCAACTATATCTGCAAATT+AGG 0.266142 3_4:+66854297 None:intergenic
CCTTCTTCAGGGCATTGTTC+AGG 0.268066 3_4:+66851575 None:intergenic
CATAATTGTTATTGCTGCTT+TGG 0.283340 3_4:-66848400 Msa0515580:CDS
TTTGACTTTAGAGCCTTATC+TGG 0.287367 3_4:+66848438 None:intergenic
CAGGAAATTGTTGCATTATC+TGG 0.291185 3_4:-66850966 Msa0515580:CDS
CAATAACAATTATGATGTTT+AGG 0.296597 3_4:+66848409 None:intergenic
CCTGAAGAAGGGAGACTTCC+TGG 0.303606 3_4:-66851563 Msa0515580:intron
CATGCGTGCGGCGGCGGCGC+CGG 0.306467 3_4:+66853873 None:intergenic
TTCTCACATCTTTCTCAATC+AGG 0.306856 3_4:-66853728 Msa0515580:intron
AGTATAAATGTAGGGGTATA+TGG 0.307712 3_4:+66848088 None:intergenic
TTTCAGGGCATTGTGGTAGA+TGG 0.326025 3_4:-66848883 Msa0515580:intron
AACTTCTCTCCCACTACATT+TGG 0.336185 3_4:+66848856 None:intergenic
GCTGAAATCCAATGATATAA+AGG 0.340292 3_4:+66848028 None:intergenic
AATAAGATGGGTCAAGTATA+AGG 0.349609 3_4:-66854136 Msa0515580:five_prime_UTR
TAAAACTCAACGAAACAAAA+TGG 0.353130 3_4:-66853953 Msa0515580:exon
TACAACACGGAAAAGAATAA+TGG 0.354199 3_4:-66847853 Msa0515580:three_prime_UTR
AAAGATGGGCCAGGAGCACC+TGG 0.354863 3_4:-66849570 Msa0515580:CDS
AATATTTGTCTTTGATTGGC+TGG 0.361482 3_4:+66851793 None:intergenic
TAAGTTCTGTCATCCTCTTT+TGG 0.362946 3_4:-66853504 Msa0515580:intron
CTGGAGAGTTGGAACAATTA+CGG 0.365633 3_4:-66848160 Msa0515580:three_prime_UTR
CCTGAATATTTGTCTTTGAT+TGG 0.366131 3_4:+66851789 None:intergenic
GTCTACTCTTCCATATTTCA+TGG 0.367084 3_4:+66851607 None:intergenic
TGGAGAGTTGGAACAATTAC+GGG 0.367409 3_4:-66848159 Msa0515580:three_prime_UTR
CCAATCAAAGACAAATATTC+AGG 0.367571 3_4:-66851789 Msa0515580:CDS
CTAGACCAGACCGCAGTGGC+TGG 0.369322 3_4:-66850923 Msa0515580:CDS
ATTATCTGGTGCGCACACAC+TGG 0.384414 3_4:-66850952 Msa0515580:CDS
TTCTATGTGACAGATTCGTT+TGG 0.387767 3_4:-66852025 Msa0515580:intron
TTATCTGGTGCGCACACACT+GGG 0.393437 3_4:-66850951 Msa0515580:CDS
ATTTCAATAAAATTTGTGTT+TGG 0.396018 3_4:-66847754 Msa0515580:three_prime_UTR
GTTTGACAACTCTTACTTCA+AGG 0.396786 3_4:-66849517 Msa0515580:intron
GACGGTGGCTCTGGTGGCGG+AGG 0.401403 3_4:+66853846 None:intergenic
GTATAATTTCCTTAGTCCTC+TGG 0.405390 3_4:+66848110 None:intergenic
TCTATGTGACAGATTCGTTT+GGG 0.406923 3_4:-66852024 Msa0515580:intron
GGATTAATAAGAAAACTAAA+AGG 0.408999 3_4:+66847911 None:intergenic
TTGCCCCAGCCACTGCGGTC+TGG 0.411028 3_4:+66850918 None:intergenic
AGAGATGGAATCAGCTTTGT+GGG 0.424573 3_4:+66848005 None:intergenic
GTACTTGGGATTCAAGTGTT+TGG 0.431119 3_4:+66854177 None:intergenic
GGGAATCATGCGTGCGGCGG+CGG 0.431703 3_4:+66853867 None:intergenic
TTTCTCATTCTACAGAAAGA+TGG 0.432931 3_4:-66849585 Msa0515580:intron
CTTTAACCATTGTGCAGTCC+AGG 0.440549 3_4:+66849539 None:intergenic
TCTTTGAATCTTCAGGAAGC+TGG 0.446122 3_4:-66851644 Msa0515580:intron
CAGGAAGTCTCCCTTCTTCA+GGG 0.452380 3_4:+66851564 None:intergenic
GGGGTGAAAGTATAAATGTA+GGG 0.452749 3_4:+66848080 None:intergenic
CAAGCAATTGAGCGAGGAAA+CGG 0.455809 3_4:+66853768 None:intergenic
ACCACAATGGCTACAATCAC+CGG 0.459447 3_4:-66853892 Msa0515580:CDS
GTAGCAGCCAATTACTCCTC+TGG 0.460289 3_4:-66848832 Msa0515580:CDS
TAGACCAGACCGCAGTGGCT+GGG 0.460927 3_4:-66850922 Msa0515580:CDS
TATACCGTGTATTTAGTCTC+AGG 0.464888 3_4:+66850894 None:intergenic
ATTCGTAGATGCAAAATTGA+AGG 0.465625 3_4:+66847886 None:intergenic
CTGAAATCCAATGATATAAA+GGG 0.466579 3_4:+66848029 None:intergenic
ATTGAGCGAGGAAACGGAAC+TGG 0.467178 3_4:+66853774 None:intergenic
CAGGTTCAAACTTTGCTCCA+AGG 0.468266 3_4:+66849112 None:intergenic
CGCAAATGATCCGCAGGTGA+AGG 0.470664 3_4:+66851112 None:intergenic
AGTACATGAAAATGACTCTT+GGG 0.471543 3_4:-66854159 Msa0515580:five_prime_UTR
CATGCCAAACTCAGCAACCT+TGG 0.474570 3_4:-66849129 Msa0515580:CDS
GCACTGAAAATTACCAAAAG+AGG 0.475415 3_4:+66853491 None:intergenic
ATGCTATGAGGAAGAAGATA+CGG 0.479276 3_4:-66848488 Msa0515580:CDS
CAACGTGAACAGACCTCTGC+AGG 0.481098 3_4:+66849093 None:intergenic
AATGACTCTTGGGAATAAGA+TGG 0.484015 3_4:-66854149 Msa0515580:five_prime_UTR
GAAATTCACTACAAGTGAAT+CGG 0.484500 3_4:-66848331 Msa0515580:three_prime_UTR
TTGACTTTAGAGCCTTATCT+GGG 0.486207 3_4:+66848439 None:intergenic
GAGGAGAAGTTCGTGCTTCG+AGG 0.488828 3_4:-66853610 Msa0515580:CDS
AAGTACATGAAAATGACTCT+TGG 0.489140 3_4:-66854160 Msa0515580:five_prime_UTR
GAGAGATGGAATCAGCTTTG+TGG 0.491842 3_4:+66848004 None:intergenic
CCTTGTCATTCAACCCCATT+CGG 0.491886 3_4:+66851077 None:intergenic
TTCTCATTCTACAGAAAGAT+GGG 0.496196 3_4:-66849584 Msa0515580:intron
AGACCAGACCGCAGTGGCTG+GGG 0.496549 3_4:-66850921 Msa0515580:CDS
TTCAAATCTTAAGCTACCAT+TGG 0.498143 3_4:+66851942 None:intergenic
CGTGCTTCGAGGGGACGATT+CGG 0.498992 3_4:-66853599 Msa0515580:CDS
TGAGAAATATGCTGTAGATC+AGG 0.501966 3_4:-66849181 Msa0515580:CDS
GAAGATACGGGCTGAATATG+AGG 0.502305 3_4:-66848475 Msa0515580:CDS
CCTGAACAATGCCCTGAAGA+AGG 0.503982 3_4:-66851575 Msa0515580:CDS
AGGGGTGAAAGTATAAATGT+AGG 0.504623 3_4:+66848079 None:intergenic
GTGATAGAGCCAGAGGACTA+AGG 0.505410 3_4:-66848119 Msa0515580:three_prime_UTR
GCAAATGATCCGCAGGTGAA+GGG 0.506978 3_4:+66851113 None:intergenic
TGAGACGGTGGCTCTGGTGG+CGG 0.507725 3_4:+66853843 None:intergenic
GCTGAATATGAGGCGGTTGG+CGG 0.508251 3_4:-66848465 Msa0515580:CDS
ATACTCCACTACTGGAGAGT+TGG 0.509908 3_4:-66848171 Msa0515580:three_prime_UTR
AGGAGAAGTTCGTGCTTCGA+GGG 0.513885 3_4:-66853609 Msa0515580:CDS
AGATGGGCCAGGAGCACCTG+GGG 0.518802 3_4:-66849568 Msa0515580:CDS
AAGGAGAAGGAAGAGAGAGA+TGG 0.521545 3_4:+66847990 None:intergenic
TGAGAGTGAGACGGTGGCTC+TGG 0.525646 3_4:+66853837 None:intergenic
CGTTTGGGATGGCATGATGC+TGG 0.534032 3_4:-66852009 Msa0515580:CDS
AAGCGCTAGAGAAGATATCA+AGG 0.535333 3_4:-66853540 Msa0515580:CDS
GAAGTTTCAATGCATTTACA+AGG 0.538155 3_4:+66851817 None:intergenic
TCTACTCTTCCATATTTCAT+GGG 0.539117 3_4:+66851608 None:intergenic
TAATGAATACATACCAGCAT+TGG 0.539538 3_4:+66851900 None:intergenic
ATGACTCTTGGGAATAAGAT+GGG 0.540196 3_4:-66854148 Msa0515580:five_prime_UTR
ACGGTGGCTCTGGTGGCGGA+GGG 0.544294 3_4:+66853847 None:intergenic
CAAATGATCCGCAGGTGAAG+GGG 0.545564 3_4:+66851114 None:intergenic
GGTTGGCGGAAGCCCAGATA+AGG 0.547496 3_4:-66848451 Msa0515580:CDS
AATTGAAATGGTGAAGGAGA+AGG 0.549067 3_4:+66847977 None:intergenic
CCACAGAGAGGTGGAGCCAA+TGG 0.553837 3_4:-66851958 Msa0515580:CDS
GGAGGGAATCATGCGTGCGG+CGG 0.556091 3_4:+66853864 None:intergenic
TACCTATAATAAGAATATTG+AGG 0.557454 3_4:-66851986 Msa0515580:CDS
AAATGATCCGCAGGTGAAGG+GGG 0.559516 3_4:+66851115 None:intergenic
CTGAACAATGCCCTGAAGAA+GGG 0.562898 3_4:-66851574 Msa0515580:CDS
TTGAAACATGGAGCCAATGC+TGG 0.568407 3_4:-66851913 Msa0515580:intron
TGCTATGAGGAAGAAGATAC+GGG 0.568469 3_4:-66848487 Msa0515580:CDS
AATCCACGATATGCTTGTGT+AGG 0.569340 3_4:+66854090 None:intergenic
TGTGACAGATTCGTTTGGGA+TGG 0.570034 3_4:-66852020 Msa0515580:intron
TTTGAAGTTGAGTTGAAACA+TGG 0.570207 3_4:-66851925 Msa0515580:CDS
AAGATGGGCCAGGAGCACCT+GGG 0.570888 3_4:-66849569 Msa0515580:CDS
AAGAGCTGTCTGATGCTATG+AGG 0.570930 3_4:-66848500 Msa0515580:CDS
TATGGAAGAGTAGACGTCAC+TGG 0.572351 3_4:-66851599 Msa0515580:CDS
TGAAAATGAGAAGAACGAAC+GGG 0.572470 3_4:+66853810 None:intergenic
TTGAATCTTCAGGAAGCTGG+AGG 0.572995 3_4:-66851641 Msa0515580:intron
GTAGATGCAAAATTGAAGGA+AGG 0.577399 3_4:+66847890 None:intergenic
AGATGGTTCTCCAAATGTAG+TGG 0.579625 3_4:-66848866 Msa0515580:CDS
GTCAAGTATAAGGTAGGACT+AGG 0.580370 3_4:-66854126 Msa0515580:five_prime_UTR
ACTTGACGCAAATGATCCGC+AGG 0.584569 3_4:+66851106 None:intergenic
AGCTAGTGCTACAGCTGTGG+AGG 0.584663 3_4:-66851739 Msa0515580:intron
ATTCTACAGAAAGATGGGCC+AGG 0.587158 3_4:-66849579 Msa0515580:intron
AGATGGGTCAAGTATAAGGT+AGG 0.587771 3_4:-66854132 Msa0515580:five_prime_UTR
TTGTTCCAACTCTCCAGTAG+TGG 0.589391 3_4:+66848166 None:intergenic
GTGATTGTAGCCATTGTGGT+TGG 0.591078 3_4:+66853895 None:intergenic
AAAAGTATTGGGTAGATGAG+TGG 0.592611 3_4:-66854211 Msa0515580:five_prime_UTR
CGGGCTGAATATGAGGCGGT+TGG 0.594896 3_4:-66848468 Msa0515580:CDS
GAGGAGTGGCCACAGAGAGG+TGG 0.596367 3_4:-66851967 Msa0515580:CDS
AGCCAATTACTCCTCTGGAA+AGG 0.597209 3_4:-66848827 Msa0515580:intron
ATGAAAATGAGAAGAACGAA+CGG 0.600197 3_4:+66853809 None:intergenic
ATGCAAGTATGAGTAGAAGA+TGG 0.601180 3_4:+66854275 None:intergenic
GTTAGCTAGTGCTACAGCTG+TGG 0.601973 3_4:-66851742 Msa0515580:CDS
CATTAATACGCAAATGCCAA+AGG 0.602261 3_4:+66848284 None:intergenic
AGCAAAGTTTGAACCTGCAG+AGG 0.602470 3_4:-66849106 Msa0515580:intron
GAGTGAGACGGTGGCTCTGG+TGG 0.602864 3_4:+66853840 None:intergenic
TTCGAGGGGACGATTCGGAA+CGG 0.614911 3_4:-66853594 Msa0515580:CDS
GACAATCCTGGACTGCACAA+TGG 0.620331 3_4:-66849545 Msa0515580:CDS
GATGGTTCTCCAAATGTAGT+GGG 0.623661 3_4:-66848865 Msa0515580:CDS
AGAAAGATGTGAGAAATGCG+AGG 0.626873 3_4:+66853736 None:intergenic
CCGAATGGGGTTGAATGACA+AGG 0.626939 3_4:-66851077 Msa0515580:intron
CCATTGGCTCCACCTCTCTG+TGG 0.637470 3_4:+66851958 None:intergenic
GCCGGTGATTGTAGCCATTG+TGG 0.638714 3_4:+66853891 None:intergenic
GGCGGAGGGAATCATGCGTG+CGG 0.643016 3_4:+66853861 None:intergenic
CTGGTGCGCACACACTGGGG+CGG 0.645690 3_4:-66850947 Msa0515580:CDS
GGGTGAAAGTATAAATGTAG+GGG 0.647476 3_4:+66848081 None:intergenic
TATCTGGTGCGCACACACTG+GGG 0.652499 3_4:-66850950 Msa0515580:CDS
AATGATCCGCAGGTGAAGGG+GGG 0.652617 3_4:+66851116 None:intergenic
ATAATAAGAATATTGAGGAG+TGG 0.654700 3_4:-66851981 Msa0515580:CDS
GGAGAAGTTCGTGCTTCGAG+GGG 0.655631 3_4:-66853608 Msa0515580:CDS
CAAGCTTAAAACCTTTCCAG+AGG 0.659132 3_4:+66848816 None:intergenic
AAACCTACACAAGCATATCG+TGG 0.661632 3_4:-66854093 Msa0515580:five_prime_UTR
GTGGTTGGTGAAGAGAGTGA+AGG 0.663024 3_4:+66853910 None:intergenic
ACTCTCTTCACCAACCACAA+TGG 0.666345 3_4:-66853905 Msa0515580:CDS
AAACAATGTGATAGAGCCAG+AGG 0.667902 3_4:-66848126 Msa0515580:three_prime_UTR
CGGTCTAGACCAGACCGCAG+TGG 0.670072 3_4:-66850927 Msa0515580:CDS
AGAACGCAAGCAATTGAGCG+AGG 0.671598 3_4:+66853762 None:intergenic
CAGGTTTGCCCCAGCCACTG+CGG 0.673272 3_4:+66850913 None:intergenic
GATGGGCCAGGAGCACCTGG+GGG 0.675083 3_4:-66849567 Msa0515580:CDS
CAAACCTGAGACTAAATACA+CGG 0.675596 3_4:-66850898 Msa0515580:intron
GGATTATCATCCAAAACACA+AGG 0.696794 3_4:-66854025 Msa0515580:five_prime_UTR
GAGATGGAATCAGCTTTGTG+GGG 0.697416 3_4:+66848006 None:intergenic
ATTGAGGAGTGGCCACAGAG+AGG 0.708811 3_4:-66851970 Msa0515580:CDS
GATACGGGCTGAATATGAGG+CGG 0.710767 3_4:-66848472 Msa0515580:CDS
AAATGAGAAGAACGAACGGG+AGG 0.713916 3_4:+66853813 None:intergenic
GGAGGTTGAGAGTGAGACGG+TGG 0.718548 3_4:+66853831 None:intergenic
ACGGGAGGTTGAGAGTGAGA+CGG 0.719482 3_4:+66853828 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAGAATATAAAATAA+TGG + chr3_4:66849355-66849374 None:intergenic 10.0%
!!! TTATTTTTTGATTATTTTGT+TGG - chr3_4:66852557-66852576 Msa0515580:intron 10.0%
!!! TATTTTTTGATTATTTTGTT+GGG - chr3_4:66852558-66852577 Msa0515580:intron 10.0%
!!! TATTTCACAAATAATTTTAT+GGG + chr3_4:66852822-66852841 None:intergenic 10.0%
!!! ATATTTCACAAATAATTTTA+TGG + chr3_4:66852823-66852842 None:intergenic 10.0%
!! ATAAAAAAGAAAACTTTAAT+AGG + chr3_4:66853128-66853147 None:intergenic 10.0%
!! TTATTTATTTATTTAGATGC+TGG - chr3_4:66850897-66850916 Msa0515580:intron 15.0%
!!! AAATGAGACATTTTTTTTTT+TGG + chr3_4:66851587-66851606 None:intergenic 15.0%
!!! ATAATCAAATAGTTTTTGAA+TGG - chr3_4:66852385-66852404 Msa0515580:intron 15.0%
!! AAAACAATATAAGATTCATT+TGG - chr3_4:66852427-66852446 Msa0515580:intron 15.0%
!!! ATTATTATCACATGTAATTT+TGG - chr3_4:66853454-66853473 Msa0515580:intron 15.0%
!!! TTTTATTTTTTTACAGACTA+CGG + chr3_4:66853796-66853815 None:intergenic 15.0%
!! ATTTCAATAAAATTTGTGTT+TGG - chr3_4:66854282-66854301 Msa0515580:five_prime_UTR 15.0%
!!! TTTTTCCCATAAAAAAGTAT+TGG - chr3_4:66847813-66847832 Msa0515580:three_prime_UTR 20.0%
!!! TTTTCCCATAAAAAAGTATT+GGG - chr3_4:66847814-66847833 Msa0515580:three_prime_UTR 20.0%
!!! TTGATTTCTCTGTAATTTTA+TGG - chr3_4:66848675-66848694 Msa0515580:intron 20.0%
!!! GTTGTTTTTATAAGCTATAT+TGG - chr3_4:66848816-66848835 Msa0515580:intron 20.0%
!!! AAATACGTTAAGAGTATATT+TGG - chr3_4:66848992-66849011 Msa0515580:intron 20.0%
!!! AGTATATTTGGTTTCATTTT+TGG - chr3_4:66849004-66849023 Msa0515580:intron 20.0%
!! AGAATCAATTTAACAATGTT+TGG - chr3_4:66849052-66849071 Msa0515580:intron 20.0%
!! GAATCAATTTAACAATGTTT+GGG - chr3_4:66849053-66849072 Msa0515580:intron 20.0%
!! TTAAATTGATATGTGATTTC+CGG - chr3_4:66849392-66849411 Msa0515580:intron 20.0%
!! TACCTATAATAAGAATATTG+AGG - chr3_4:66850050-66850069 Msa0515580:intron 20.0%
!! ATTACTCCAATTAGATATAT+GGG + chr3_4:66850504-66850523 None:intergenic 20.0%
!! TATTACTCCAATTAGATATA+TGG + chr3_4:66850505-66850524 None:intergenic 20.0%
!!! GAGACAATAAGTTTTTTATT+AGG - chr3_4:66850612-66850631 Msa0515580:intron 20.0%
!!! AATAAATAAGGGTATATTAG+TGG + chr3_4:66851674-66851693 None:intergenic 20.0%
!! GGTTGAAATACAATAAATAA+GGG + chr3_4:66851685-66851704 None:intergenic 20.0%
!!! ACTCAACTCAAATTTTAATT+CGG - chr3_4:66851953-66851972 Msa0515580:CDS 20.0%
!! TATTCATATCTCTTGAAATT+TGG + chr3_4:66852174-66852193 None:intergenic 20.0%
!! TACTTAAGATTATGTATAGT+TGG + chr3_4:66852320-66852339 None:intergenic 20.0%
!!! ATTTTATAACAGTATAGGAA+GGG - chr3_4:66852594-66852613 Msa0515580:intron 20.0%
!! TTGTAATTATTGTTACATAC+AGG - chr3_4:66852655-66852674 Msa0515580:intron 20.0%
!! TGTTGAATAAATATGAACAT+GGG + chr3_4:66852779-66852798 None:intergenic 20.0%
!! ATGTTGAATAAATATGAACA+TGG + chr3_4:66852780-66852799 None:intergenic 20.0%
!! AAATTATTTGTGAAATATGC+AGG - chr3_4:66852825-66852844 Msa0515580:intron 20.0%
!!! TTCTTTTTTATCTGTTTTTC+AGG - chr3_4:66853137-66853156 Msa0515580:intron 20.0%
!!! TCTTTTTTATCTGTTTTTCA+GGG - chr3_4:66853138-66853157 Msa0515580:intron 20.0%
!! AAATCTTAAATGAAGAAGAA+AGG - chr3_4:66853477-66853496 Msa0515580:intron 20.0%
!! CAATAACAATTATGATGTTT+AGG + chr3_4:66853630-66853649 None:intergenic 20.0%
!!! AATTTTACCCTTTATATCAT+TGG - chr3_4:66854000-66854019 Msa0515580:five_prime_UTR 20.0%
!! GAAATCATATAAGAAAAACA+AGG + chr3_4:66854096-66854115 None:intergenic 20.0%
!! GGATTAATAAGAAAACTAAA+AGG + chr3_4:66854128-66854147 None:intergenic 20.0%
!!! AATGTTTTTACATTACAACA+CGG - chr3_4:66854170-66854189 Msa0515580:five_prime_UTR 20.0%
!!! TCATAGATCAATTTCATTTT+GGG + chr3_4:66854226-66854245 None:intergenic 20.0%
!!! ATCATAGATCAATTTCATTT+TGG + chr3_4:66854227-66854246 None:intergenic 20.0%
!!! TCTACCCAATACTTTTTTAT+GGG + chr3_4:66847821-66847840 None:intergenic 25.0%
!!! ATCTACCCAATACTTTTTTA+TGG + chr3_4:66847822-66847841 None:intergenic 25.0%
! TAAAACTCAACGAAACAAAA+TGG - chr3_4:66848083-66848102 Msa0515580:three_prime_UTR 25.0%
!!! ATTTTCAGTGCTTTTTTTCT+TGG - chr3_4:66848557-66848576 Msa0515580:intron 25.0%
! CTTGGATATCAAGATTATTA+GGG + chr3_4:66848968-66848987 None:intergenic 25.0%
! TTGTCTGAATTAATTCTAAC+TGG - chr3_4:66849097-66849116 Msa0515580:intron 25.0%
! TTAGTTAAAAGTGAGCTAAA+TGG + chr3_4:66849223-66849242 None:intergenic 25.0%
!! TCCAAATCAATTTTTGTCAT+CGG - chr3_4:66849254-66849273 Msa0515580:intron 25.0%
! TTAGTTACTTAATGTGTGTT+TGG + chr3_4:66849290-66849309 None:intergenic 25.0%
! TTGAATCAATCATCAAACAA+CGG + chr3_4:66849450-66849469 None:intergenic 25.0%
! TTTAATGTAATCACATGTGT+CGG + chr3_4:66849694-66849713 None:intergenic 25.0%
! GTAAAGCTATAAATCTCTTA+TGG + chr3_4:66849809-66849828 None:intergenic 25.0%
!!! CTTTTTTCTTTTCATTGTGA+CGG - chr3_4:66849977-66849996 Msa0515580:intron 25.0%
! CTCCTCAATATTCTTATTAT+AGG + chr3_4:66850055-66850074 None:intergenic 25.0%
! ATAATAAGAATATTGAGGAG+TGG - chr3_4:66850055-66850074 Msa0515580:intron 25.0%
! CAATATTCAGATATAATTGG+TGG + chr3_4:66850163-66850182 None:intergenic 25.0%
! GAGCAATATTCAGATATAAT+TGG + chr3_4:66850166-66850185 None:intergenic 25.0%
!! CATATTTCATGGGAATTTTT+GGG + chr3_4:66850421-66850440 None:intergenic 25.0%
! GTAAAACCCATATATCTAAT+TGG - chr3_4:66850495-66850514 Msa0515580:intron 25.0%
! AATCATGTTTAATAGCTTGA+GGG + chr3_4:66851183-66851202 None:intergenic 25.0%
! AAATCATGTTTAATAGCTTG+AGG + chr3_4:66851184-66851203 None:intergenic 25.0%
! TGGTAAAATAATCATTCGAA+TGG - chr3_4:66851305-66851324 Msa0515580:intron 25.0%
! AAAATAATCATTCGAATGGA+TGG - chr3_4:66851309-66851328 Msa0515580:intron 25.0%
! TCACCTTTAGACTTAATAAA+AGG - chr3_4:66851449-66851468 Msa0515580:intron 25.0%
!! TGACCTTTTATTAAGTCTAA+AGG + chr3_4:66851455-66851474 None:intergenic 25.0%
! GGGTTGAAATACAATAAATA+AGG + chr3_4:66851686-66851705 None:intergenic 25.0%
! ATGAGAAACTTATAATGAGA+TGG - chr3_4:66851818-66851837 Msa0515580:CDS 25.0%
! AACAATTGTAGCAAAGATTT+AGG + chr3_4:66852272-66852291 None:intergenic 25.0%
!!! TTTTTGATTATTTTGTTGGG+AGG - chr3_4:66852561-66852580 Msa0515580:intron 25.0%
!!! TTTTGATTATTTTGTTGGGA+GGG - chr3_4:66852562-66852581 Msa0515580:intron 25.0%
!! GATTTTATAACAGTATAGGA+AGG - chr3_4:66852593-66852612 Msa0515580:intron 25.0%
! AAAAAAGGATGAAGATCTAT+TGG - chr3_4:66852688-66852707 Msa0515580:intron 25.0%
!!! TGTTTTGTGCATTTTTAGAT+GGG - chr3_4:66852972-66852991 Msa0515580:intron 25.0%
! GAAAACTTTAATAGGTGATT+TGG + chr3_4:66853120-66853139 None:intergenic 25.0%
! ATATCTGTTTGGAAACTAAT+TGG - chr3_4:66853669-66853688 Msa0515580:intron 25.0%
!!! CACTTGTTATTTTTTTCCTT+TGG - chr3_4:66853736-66853755 Msa0515580:CDS 25.0%
!! AGATTTTCTTCTTACTTGTA+GGG + chr3_4:66853979-66853998 None:intergenic 25.0%
! CTGAAATCCAATGATATAAA+GGG + chr3_4:66854010-66854029 None:intergenic 25.0%
! GAGAATCAGAAAAATTGAAA+TGG + chr3_4:66854074-66854093 None:intergenic 25.0%
!! CATAGATCAATTTCATTTTG+GGG + chr3_4:66854225-66854244 None:intergenic 25.0%
!! AGAGTCATTTTCATGTACTT+GGG + chr3_4:66847876-66847895 None:intergenic 30.0%
!! AAGAGTCATTTTCATGTACT+TGG + chr3_4:66847877-66847896 None:intergenic 30.0%
AAGTACATGAAAATGACTCT+TGG - chr3_4:66847876-66847895 Msa0515580:three_prime_UTR 30.0%
AGTACATGAAAATGACTCTT+GGG - chr3_4:66847877-66847896 Msa0515580:three_prime_UTR 30.0%
AATAAGATGGGTCAAGTATA+AGG - chr3_4:66847900-66847919 Msa0515580:three_prime_UTR 30.0%
!! ACAAGAAGTAGAGTTTTGAT+TGG - chr3_4:66847980-66847999 Msa0515580:three_prime_UTR 30.0%
ATGAAAATGAGAAGAACGAA+CGG + chr3_4:66848230-66848249 None:intergenic 30.0%
!! TAAGTTTTGTGAGACTGTTT+AGG + chr3_4:66848907-66848926 None:intergenic 30.0%
CCTTGGATATCAAGATTATT+AGG + chr3_4:66848969-66848988 None:intergenic 30.0%
CCTAATAATCTTGATATCCA+AGG - chr3_4:66848966-66848985 Msa0515580:intron 30.0%
TTCAGACAAAATCAATCCTA+CGG + chr3_4:66849086-66849105 None:intergenic 30.0%
ATTAATTCTAACTGGAAGCT+AGG - chr3_4:66849105-66849124 Msa0515580:intron 30.0%
TTAATTCTAACTGGAAGCTA+GGG - chr3_4:66849106-66849125 Msa0515580:intron 30.0%
AAATGGAAGTGGTTTATGTT+TGG + chr3_4:66849206-66849225 None:intergenic 30.0%
CATTAAGTAACTAAGTTCCT+TGG - chr3_4:66849296-66849315 Msa0515580:intron 30.0%
GTCAGTGACTCATATTATTA+GGG - chr3_4:66849318-66849337 Msa0515580:CDS 30.0%
TCAGTGACTCATATTATTAG+GGG - chr3_4:66849319-66849338 Msa0515580:CDS 30.0%
TGTTAATGGAACACTAAAAC+CGG + chr3_4:66849414-66849433 None:intergenic 30.0%
ACGATACACTATAAATTGTC+TGG - chr3_4:66849478-66849497 Msa0515580:intron 30.0%
! TGTCATATGATTTGTAGCAT+AGG - chr3_4:66849946-66849965 Msa0515580:intron 30.0%
TTCAAATCTTAAGCTACCAT+TGG + chr3_4:66850097-66850116 None:intergenic 30.0%
!! TTTGAAGTTGAGTTGAAACA+TGG - chr3_4:66850111-66850130 Msa0515580:intron 30.0%
TAATGAATACATACCAGCAT+TGG + chr3_4:66850139-66850158 None:intergenic 30.0%
TTATATCTGAATATTGCTCG+TGG - chr3_4:66850167-66850186 Msa0515580:intron 30.0%
GAAGTTTCAATGCATTTACA+AGG + chr3_4:66850222-66850241 None:intergenic 30.0%
AATATTTGTCTTTGATTGGC+TGG + chr3_4:66850246-66850265 None:intergenic 30.0%
CCTGAATATTTGTCTTTGAT+TGG + chr3_4:66850250-66850269 None:intergenic 30.0%
CCAATCAAAGACAAATATTC+AGG - chr3_4:66850247-66850266 Msa0515580:intron 30.0%
ATCAATCTTGAAGTCAAAGT+AGG + chr3_4:66850333-66850352 None:intergenic 30.0%
! ACCATTTTCTTTGAATCTTC+AGG - chr3_4:66850385-66850404 Msa0515580:intron 30.0%
TCCTGAAGATTCAAAGAAAA+TGG + chr3_4:66850389-66850408 None:intergenic 30.0%
! CCATATTTCATGGGAATTTT+TGG + chr3_4:66850422-66850441 None:intergenic 30.0%
CCAAAAATTCCCATGAAATA+TGG - chr3_4:66850419-66850438 Msa0515580:intron 30.0%
TCTACTCTTCCATATTTCAT+GGG + chr3_4:66850431-66850450 None:intergenic 30.0%
! TTAGATATATGGGTTTTACC+AGG + chr3_4:66850494-66850513 None:intergenic 30.0%
TGGATAAGCTACTGTTAATT+TGG - chr3_4:66850575-66850594 Msa0515580:intron 30.0%
GGATAAGCTACTGTTAATTT+GGG - chr3_4:66850576-66850595 Msa0515580:intron 30.0%
AACAGTTAGCCATATAGAAA+TGG - chr3_4:66850647-66850666 Msa0515580:intron 30.0%
!!! TGATGATATGATGCCTTTTT+TGG - chr3_4:66850727-66850746 Msa0515580:intron 30.0%
!!! TATGATGCCTTTTTTGGTTT+TGG - chr3_4:66850733-66850752 Msa0515580:intron 30.0%
AACCAAACCAAAACCAAAAA+AGG + chr3_4:66850743-66850762 None:intergenic 30.0%
TCCAATGTAAACAAGCAATT+TGG - chr3_4:66850776-66850795 Msa0515580:intron 30.0%
TCCAAATTGCTTGTTTACAT+TGG + chr3_4:66850780-66850799 None:intergenic 30.0%
CAATTTGGACAGGTTTAATT+TGG - chr3_4:66850791-66850810 Msa0515580:intron 30.0%
CCGAAAAAACTAGTAAACTA+GGG + chr3_4:66850852-66850871 None:intergenic 30.0%
!!! CCCTAGTTTACTAGTTTTTT+CGG - chr3_4:66850849-66850868 Msa0515580:intron 30.0%
ACCGAAAAAACTAGTAAACT+AGG + chr3_4:66850853-66850872 None:intergenic 30.0%
TATCATGTTATTGTATCTGC+AGG - chr3_4:66851051-66851070 Msa0515580:intron 30.0%
TTAATAGCTTGAGGGTAAAA+AGG + chr3_4:66851175-66851194 None:intergenic 30.0%
! TAGTTTGAAGCTATAGATGA+TGG - chr3_4:66851285-66851304 Msa0515580:intron 30.0%
!! ATGACTTGAAGGTGTTATAA+GGG + chr3_4:66851353-66851372 None:intergenic 30.0%
!! AATGACTTGAAGGTGTTATA+AGG + chr3_4:66851354-66851373 None:intergenic 30.0%
TATAACACCTTCAAGTCATT+TGG - chr3_4:66851354-66851373 Msa0515580:intron 30.0%
AGAAACTTATAATGAGATGG+AGG - chr3_4:66851821-66851840 Msa0515580:CDS 30.0%
GAAACTTATAATGAGATGGA+GGG - chr3_4:66851822-66851841 Msa0515580:intron 30.0%
! TGATGATGATTTCTTGATGA+TGG + chr3_4:66851872-66851891 None:intergenic 30.0%
! CCACTTATAAACACATTTTC+AGG + chr3_4:66852103-66852122 None:intergenic 30.0%
CCTGAAAATGTGTTTATAAG+TGG - chr3_4:66852100-66852119 Msa0515580:intron 30.0%
TTTCTCATTCTACAGAAAGA+TGG - chr3_4:66852451-66852470 Msa0515580:intron 30.0%
TTCTCATTCTACAGAAAGAT+GGG - chr3_4:66852452-66852471 Msa0515580:intron 30.0%
!! TTTGATTATTTTGTTGGGAG+GGG - chr3_4:66852563-66852582 Msa0515580:intron 30.0%
! GGGTGATTTTATAACAGTAT+AGG - chr3_4:66852589-66852608 Msa0515580:intron 30.0%
ACAGGACATCAAAGAAAAAA+AGG - chr3_4:66852673-66852692 Msa0515580:intron 30.0%
! ATTCAGCAATTTTACCTTGA+AGG + chr3_4:66852750-66852769 None:intergenic 30.0%
!! CTGTTTTGTGCATTTTTAGA+TGG - chr3_4:66852971-66852990 Msa0515580:intron 30.0%
ATGCAGACATGAAAAAGAAA+AGG + chr3_4:66853056-66853075 None:intergenic 30.0%
! TTCATTTTCTTGATGCTTGT+TGG - chr3_4:66853265-66853284 Msa0515580:intron 30.0%
!! AAGAAGCTATTTTCAAATCG+TGG - chr3_4:66853430-66853449 Msa0515580:intron 30.0%
!! AGAAGCTATTTTCAAATCGT+GGG - chr3_4:66853431-66853450 Msa0515580:intron 30.0%
! CATAATTGTTATTGCTGCTT+TGG - chr3_4:66853636-66853655 Msa0515580:intron 30.0%
!!! GCTATTTTGACATATCTGTT+TGG - chr3_4:66853658-66853677 Msa0515580:intron 30.0%
GAAATTCACTACAAGTGAAT+CGG - chr3_4:66853705-66853724 Msa0515580:intron 30.0%
AAAAACAAATACTCCACTAC+TGG - chr3_4:66853857-66853876 Msa0515580:CDS 30.0%
! AGTATAAATGTAGGGGTATA+TGG + chr3_4:66853951-66853970 None:intergenic 30.0%
! GATTTTCTTCTTACTTGTAG+GGG + chr3_4:66853978-66853997 None:intergenic 30.0%
! GAGATTTTCTTCTTACTTGT+AGG + chr3_4:66853980-66853999 None:intergenic 30.0%
GCTGAAATCCAATGATATAA+AGG + chr3_4:66854011-66854030 None:intergenic 30.0%
CAGAAAAATTGAAATGGTGA+AGG + chr3_4:66854068-66854087 None:intergenic 30.0%
ATTCGTAGATGCAAAATTGA+AGG + chr3_4:66854153-66854172 None:intergenic 30.0%
TACAACACGGAAAAGAATAA+TGG - chr3_4:66854183-66854202 Msa0515580:five_prime_UTR 30.0%
ATGCAAGTATGAGTAGAAGA+TGG + chr3_4:66847764-66847783 None:intergenic 35.0%
!! AAAAGTATTGGGTAGATGAG+TGG - chr3_4:66847825-66847844 Msa0515580:three_prime_UTR 35.0%
AATGACTCTTGGGAATAAGA+TGG - chr3_4:66847887-66847906 Msa0515580:three_prime_UTR 35.0%
ATGACTCTTGGGAATAAGAT+GGG - chr3_4:66847888-66847907 Msa0515580:three_prime_UTR 35.0%
!! TGTGTTTTGGATGATAATCC+TGG + chr3_4:66848011-66848030 None:intergenic 35.0%
GGATTATCATCCAAAACACA+AGG - chr3_4:66848011-66848030 Msa0515580:three_prime_UTR 35.0%
! CTTTTCTTCTCCTTGTGTTT+TGG + chr3_4:66848024-66848043 None:intergenic 35.0%
TGAAAATGAGAAGAACGAAC+GGG + chr3_4:66848229-66848248 None:intergenic 35.0%
TTCTCACATCTTTCTCAATC+AGG - chr3_4:66848308-66848327 Msa0515580:three_prime_UTR 35.0%
GTTTGTGTTAATTGCGTTTG+CGG - chr3_4:66848391-66848410 Msa0515580:CDS 35.0%
! TAAGTTCTGTCATCCTCTTT+TGG - chr3_4:66848532-66848551 Msa0515580:intron 35.0%
GCACTGAAAATTACCAAAAG+AGG + chr3_4:66848548-66848567 None:intergenic 35.0%
! GATTTAGCGTTTTCTTTGTC+TGG - chr3_4:66848621-66848640 Msa0515580:intron 35.0%
TTATTAGGGTCTGTTTGGAT+TGG + chr3_4:66848954-66848973 None:intergenic 35.0%
CAAGATTATTAGGGTCTGTT+TGG + chr3_4:66848959-66848978 None:intergenic 35.0%
! CTCTTAACGTATTTTCACCT+TGG + chr3_4:66848986-66849005 None:intergenic 35.0%
AAAAGTGAGCTAAATGGAAG+TGG + chr3_4:66849217-66849236 None:intergenic 35.0%
GCCGATGACAAAAATTGATT+TGG + chr3_4:66849258-66849277 None:intergenic 35.0%
ATAATATGAGTCACTGACCA+AGG + chr3_4:66849316-66849335 None:intergenic 35.0%
GGTCAGTGACTCATATTATT+AGG - chr3_4:66849317-66849336 Msa0515580:CDS 35.0%
!! TTCTTTGCACTAGTCTTTGT+AGG + chr3_4:66849513-66849532 None:intergenic 35.0%
! CAACTCAGAGTTTGATAACT+AGG + chr3_4:66849893-66849912 None:intergenic 35.0%
ATATACCAGCCACATATAGA+TGG - chr3_4:66849918-66849937 Msa0515580:intron 35.0%
TTCTATGTGACAGATTCGTT+TGG - chr3_4:66850011-66850030 Msa0515580:intron 35.0%
TCTATGTGACAGATTCGTTT+GGG - chr3_4:66850012-66850031 Msa0515580:intron 35.0%
TTCTTATGAGCTGCAATTTC+AGG - chr3_4:66850196-66850215 Msa0515580:intron 35.0%
TTGAAGTCAAAGTAGGACTT+AGG + chr3_4:66850326-66850345 None:intergenic 35.0%
GTCTACTCTTCCATATTTCA+TGG + chr3_4:66850432-66850451 None:intergenic 35.0%
AATTTCTTCTTTGCCTCTGT+AGG - chr3_4:66850536-66850555 Msa0515580:intron 35.0%
!!! TGCCTTTTTTGGTTTTGGTT+TGG - chr3_4:66850738-66850757 Msa0515580:intron 35.0%
TGTAAACAAGCAATTTGGAC+AGG - chr3_4:66850781-66850800 Msa0515580:intron 35.0%
AACAACCCAGAAATCGAAAA+CGG + chr3_4:66850817-66850836 None:intergenic 35.0%
! AATACCCTGTGTTTTCCATA+AGG - chr3_4:66850983-66851002 Msa0515580:intron 35.0%
CAGGAAATTGTTGCATTATC+TGG - chr3_4:66851070-66851089 Msa0515580:intron 35.0%
CAAACCTGAGACTAAATACA+CGG - chr3_4:66851138-66851157 Msa0515580:intron 35.0%
TATACCGTGTATTTAGTCTC+AGG + chr3_4:66851145-66851164 None:intergenic 35.0%
ACACTTATTACTGAGACAGA+AGG + chr3_4:66851548-66851567 None:intergenic 35.0%
GGTAATATCTCATCGAATGT+GGG + chr3_4:66852082-66852101 None:intergenic 35.0%
AGGTAATATCTCATCGAATG+TGG + chr3_4:66852083-66852102 None:intergenic 35.0%
!! GTACTCCTAATTTTAGAAGC+CGG - chr3_4:66852122-66852141 Msa0515580:intron 35.0%
!! CAAAACCGGCTTCTAAAATT+AGG + chr3_4:66852130-66852149 None:intergenic 35.0%
!! ATTTTAGAAGCCGGTTTTGT+AGG - chr3_4:66852131-66852150 Msa0515580:intron 35.0%
!! TTTTAGAAGCCGGTTTTGTA+GGG - chr3_4:66852132-66852151 Msa0515580:intron 35.0%
AAGTAAACTGAAGTAAGCCA+TGG + chr3_4:66852235-66852254 None:intergenic 35.0%
GAAGATACACAAAACTTGAC+AGG + chr3_4:66852349-66852368 None:intergenic 35.0%
GTTTGACAACTCTTACTTCA+AGG - chr3_4:66852519-66852538 Msa0515580:intron 35.0%
! AGCAATTTTACCTTGAAGGA+AGG + chr3_4:66852746-66852765 None:intergenic 35.0%
TGAGAAATATGCTGTAGATC+AGG - chr3_4:66852855-66852874 Msa0515580:intron 35.0%
! GTTCATTGTTTCTCTATTCC+TGG - chr3_4:66853345-66853364 Msa0515580:intron 35.0%
ATGCTATGAGGAAGAAGATA+CGG - chr3_4:66853548-66853567 Msa0515580:CDS 35.0%
!! TTGACTTTAGAGCCTTATCT+GGG + chr3_4:66853600-66853619 None:intergenic 35.0%
!! TTTGACTTTAGAGCCTTATC+TGG + chr3_4:66853601-66853620 None:intergenic 35.0%
CATTAATACGCAAATGCCAA+AGG + chr3_4:66853755-66853774 None:intergenic 35.0%
GTATAATTTCCTTAGTCCTC+TGG + chr3_4:66853929-66853948 None:intergenic 35.0%
! GGGTGAAAGTATAAATGTAG+GGG + chr3_4:66853958-66853977 None:intergenic 35.0%
! GGGGTGAAAGTATAAATGTA+GGG + chr3_4:66853959-66853978 None:intergenic 35.0%
! AGGGGTGAAAGTATAAATGT+AGG + chr3_4:66853960-66853979 None:intergenic 35.0%
AATTGAAATGGTGAAGGAGA+AGG + chr3_4:66854062-66854081 None:intergenic 35.0%
GTAGATGCAAAATTGAAGGA+AGG + chr3_4:66854149-66854168 None:intergenic 35.0%
GTACTTGGGATTCAAGTGTT+TGG + chr3_4:66847862-66847881 None:intergenic 40.0%
AGATGGGTCAAGTATAAGGT+AGG - chr3_4:66847904-66847923 Msa0515580:three_prime_UTR 40.0%
GTCAAGTATAAGGTAGGACT+AGG - chr3_4:66847910-66847929 Msa0515580:three_prime_UTR 40.0%
AAACCTACACAAGCATATCG+TGG - chr3_4:66847943-66847962 Msa0515580:three_prime_UTR 40.0%
AATCCACGATATGCTTGTGT+AGG + chr3_4:66847949-66847968 None:intergenic 40.0%
!!! GAGTTTTGATTGGCAAATCC+AGG - chr3_4:66847990-66848009 Msa0515580:three_prime_UTR 40.0%
AGAAAGATGTGAGAAATGCG+AGG + chr3_4:66848303-66848322 None:intergenic 40.0%
AAGCGCTAGAGAAGATATCA+AGG - chr3_4:66848496-66848515 Msa0515580:CDS 40.0%
GCTTGTTTGAGCTTATCTAC+TGG + chr3_4:66848932-66848951 None:intergenic 40.0%
! ATGTTTGGGTGTTTTTCCGT+AGG - chr3_4:66849067-66849086 Msa0515580:intron 40.0%
TCCATTAACAGTGTCTTTGC+TGG - chr3_4:66849424-66849443 Msa0515580:intron 40.0%
!! GTAATCACATGTGTCGGTTT+CGG + chr3_4:66849688-66849707 None:intergenic 40.0%
GACAAAGCTCCATCTATATG+TGG + chr3_4:66849930-66849949 None:intergenic 40.0%
TCTTTGAATCTTCAGGAAGC+TGG - chr3_4:66850392-66850411 Msa0515580:intron 40.0%
!! TAGGATTCTAGGACATGGAT+TGG - chr3_4:66850555-66850574 Msa0515580:intron 40.0%
TAGCCATATAGAAATGGCTG+TGG - chr3_4:66850653-66850672 Msa0515580:intron 40.0%
CAACCACAGCCATTTCTATA+TGG + chr3_4:66850659-66850678 None:intergenic 40.0%
!! ATTTGGCCGTTTTCGATTTC+TGG - chr3_4:66850808-66850827 Msa0515580:intron 40.0%
!! TTTGGCCGTTTTCGATTTCT+GGG - chr3_4:66850809-66850828 Msa0515580:intron 40.0%
! CGTCAAGTTTTCTACCGAAT+GGG - chr3_4:66850945-66850964 Msa0515580:CDS 40.0%
! GTCAAGTTTTCTACCGAATG+GGG - chr3_4:66850946-66850965 Msa0515580:CDS 40.0%
CCATCCTTATGGAAAACACA+GGG + chr3_4:66850990-66851009 None:intergenic 40.0%
! CCTGTGTTTTCCATAAGGAT+GGG - chr3_4:66850988-66851007 Msa0515580:intron 40.0%
! CTGTGTTTTCCATAAGGATG+GGG - chr3_4:66850989-66851008 Msa0515580:intron 40.0%
! TGTGTTTTCCATAAGGATGG+GGG - chr3_4:66850990-66851009 Msa0515580:intron 40.0%
AATACTTACCCCCATCCTTA+TGG + chr3_4:66851001-66851020 None:intergenic 40.0%
ATAAGGATGGGGGTAAGTAT+TGG - chr3_4:66851000-66851019 Msa0515580:intron 40.0%
TGCTCAACCAAATGACTTGA+AGG + chr3_4:66851364-66851383 None:intergenic 40.0%
! TCGCGTTAGTCTGATAACAT+CGG - chr3_4:66851398-66851417 Msa0515580:intron 40.0%
! AAGAGCGATTGCTCTTTTGT+TGG - chr3_4:66851492-66851511 Msa0515580:intron 40.0%
! AGAGCGATTGCTCTTTTGTT+GGG - chr3_4:66851493-66851512 Msa0515580:intron 40.0%
TACTGAGACAGAAGGAATCA+AGG + chr3_4:66851540-66851559 None:intergenic 40.0%
TTGTAGTTAGTCGAGTGCTT+AGG + chr3_4:66851710-66851729 None:intergenic 40.0%
!! GATGGAGGGAGTATTACTTT+AGG - chr3_4:66851836-66851855 Msa0515580:intron 40.0%
CATCATCAATGCAACATCTC+TGG - chr3_4:66851890-66851909 Msa0515580:intron 40.0%
CTAACTCAACCCTACAAAAC+CGG + chr3_4:66852144-66852163 None:intergenic 40.0%
AAACTGAAGTAAGCCATGGA+AGG + chr3_4:66852231-66852250 None:intergenic 40.0%
! GTTTTGTGTATCTTCAGAGC+TGG - chr3_4:66852354-66852373 Msa0515580:intron 40.0%
!! ATTATTTTGTTGGGAGGGGA+GGG - chr3_4:66852567-66852586 Msa0515580:intron 40.0%
TAACAGTATAGGAAGGGAAG+AGG - chr3_4:66852600-66852619 Msa0515580:intron 40.0%
TCAAAAAGAGCAGCATCAGT+TGG + chr3_4:66852719-66852738 None:intergenic 40.0%
! TTTTGACGATCCTTCCTTCA+AGG - chr3_4:66852733-66852752 Msa0515580:intron 40.0%
!!! ATCTGTTTTTCAGGGCATTG+TGG - chr3_4:66853146-66853165 Msa0515580:intron 40.0%
AGATGGTTCTCCAAATGTAG+TGG - chr3_4:66853170-66853189 Msa0515580:intron 40.0%
GATGGTTCTCCAAATGTAGT+GGG - chr3_4:66853171-66853190 Msa0515580:intron 40.0%
AACTTCTCTCCCACTACATT+TGG + chr3_4:66853183-66853202 None:intergenic 40.0%
AACCTTTCCAGAGGAGTAAT+TGG + chr3_4:66853214-66853233 None:intergenic 40.0%
CAAGCTTAAAACCTTTCCAG+AGG + chr3_4:66853223-66853242 None:intergenic 40.0%
! TTTTACTCCTGCATCAAACC+AGG + chr3_4:66853366-66853385 None:intergenic 40.0%
TGCTATGAGGAAGAAGATAC+GGG - chr3_4:66853549-66853568 Msa0515580:CDS 40.0%
CTGGAGAGTTGGAACAATTA+CGG - chr3_4:66853876-66853895 Msa0515580:CDS 40.0%
TGGAGAGTTGGAACAATTAC+GGG - chr3_4:66853877-66853896 Msa0515580:CDS 40.0%
! TGGAACAATTACGGGTTTTC+TGG - chr3_4:66853885-66853904 Msa0515580:CDS 40.0%
AAACAATGTGATAGAGCCAG+AGG - chr3_4:66853910-66853929 Msa0515580:CDS 40.0%
! AGAGATGGAATCAGCTTTGT+GGG + chr3_4:66854034-66854053 None:intergenic 40.0%
ACTCTCTTCACCAACCACAA+TGG - chr3_4:66848131-66848150 Msa0515580:three_prime_UTR 45.0%
GTGATTGTAGCCATTGTGGT+TGG + chr3_4:66848144-66848163 None:intergenic 45.0%
ACCACAATGGCTACAATCAC+CGG - chr3_4:66848144-66848163 Msa0515580:three_prime_UTR 45.0%
AAATGAGAAGAACGAACGGG+AGG + chr3_4:66848226-66848245 None:intergenic 45.0%
CAAGCAATTGAGCGAGGAAA+CGG + chr3_4:66848271-66848290 None:intergenic 45.0%
!! TTTGCGGTTTTTCAGCGAAG+AGG - chr3_4:66848407-66848426 Msa0515580:CDS 45.0%
! CTAGCGCTTTTCAACTGATC+AGG + chr3_4:66848485-66848504 None:intergenic 45.0%
GCCAGCAAAGACACTGTTAA+TGG + chr3_4:66849428-66849447 None:intergenic 45.0%
!! TAACAAAGGCGTCGACTTGT+CGG - chr3_4:66849734-66849753 Msa0515580:intron 45.0%
AAGCTCCATCTATATGTGGC+TGG + chr3_4:66849926-66849945 None:intergenic 45.0%
TGTGACAGATTCGTTTGGGA+TGG - chr3_4:66850016-66850035 Msa0515580:intron 45.0%
TTGAAACATGGAGCCAATGC+TGG - chr3_4:66850123-66850142 Msa0515580:intron 45.0%
TTGAATCTTCAGGAAGCTGG+AGG - chr3_4:66850395-66850414 Msa0515580:intron 45.0%
TATGGAAGAGTAGACGTCAC+TGG - chr3_4:66850437-66850456 Msa0515580:intron 45.0%
CTGAACAATGCCCTGAAGAA+GGG - chr3_4:66850462-66850481 Msa0515580:intron 45.0%
CTTTGCCTCTGTAGGATTCT+AGG - chr3_4:66850544-66850563 Msa0515580:intron 45.0%
CATGTCCTAGAATCCTACAG+AGG + chr3_4:66850552-66850571 None:intergenic 45.0%
!! CTCTGTAGGATTCTAGGACA+TGG - chr3_4:66850550-66850569 Msa0515580:intron 45.0%
! GCGTCAAGTTTTCTACCGAA+TGG - chr3_4:66850944-66850963 Msa0515580:CDS 45.0%
CCTTGTCATTCAACCCCATT+CGG + chr3_4:66850962-66850981 None:intergenic 45.0%
! CCCTGTGTTTTCCATAAGGA+TGG - chr3_4:66850987-66851006 Msa0515580:intron 45.0%
CCCATCCTTATGGAAAACAC+AGG + chr3_4:66850991-66851010 None:intergenic 45.0%
TAGTTAGTCGAGTGCTTAGG+CGG + chr3_4:66851707-66851726 None:intergenic 45.0%
CCATACAAAACCAGCTTGTG+AGG + chr3_4:66851924-66851943 None:intergenic 45.0%
!!! CCTCACAAGCTGGTTTTGTA+TGG - chr3_4:66851921-66851940 Msa0515580:CDS 45.0%
AGAACCTTCCTAACAACCGT+TGG - chr3_4:66851980-66851999 Msa0515580:CDS 45.0%
GAACCTTCCTAACAACCGTT+GGG - chr3_4:66851981-66852000 Msa0515580:CDS 45.0%
CCATGGAAGGTCTACACAAA+CGG + chr3_4:66852218-66852237 None:intergenic 45.0%
ATTCTACAGAAAGATGGGCC+AGG - chr3_4:66852457-66852476 Msa0515580:intron 45.0%
CTTTAACCATTGTGCAGTCC+AGG + chr3_4:66852500-66852519 None:intergenic 45.0%
!! GATTATTTTGTTGGGAGGGG+AGG - chr3_4:66852566-66852585 Msa0515580:intron 45.0%
!! TTATTTTGTTGGGAGGGGAG+GGG - chr3_4:66852568-66852587 Msa0515580:intron 45.0%
CAGGTTCAAACTTTGCTCCA+AGG + chr3_4:66852927-66852946 None:intergenic 45.0%
AGCAAAGTTTGAACCTGCAG+AGG - chr3_4:66852930-66852949 Msa0515580:intron 45.0%
!! TTTCAGGGCATTGTGGTAGA+TGG - chr3_4:66853153-66853172 Msa0515580:intron 45.0%
! AGCCAATTACTCCTCTGGAA+AGG - chr3_4:66853209-66853228 Msa0515580:intron 45.0%
! CTCTATTCCTGGTTTGATGC+AGG - chr3_4:66853356-66853375 Msa0515580:intron 45.0%
AAGAGCTGTCTGATGCTATG+AGG - chr3_4:66853536-66853555 Msa0515580:CDS 45.0%
! GAAGATACGGGCTGAATATG+AGG - chr3_4:66853561-66853580 Msa0515580:CDS 45.0%
ATACTCCACTACTGGAGAGT+TGG - chr3_4:66853865-66853884 Msa0515580:CDS 45.0%
TTGTTCCAACTCTCCAGTAG+TGG + chr3_4:66853873-66853892 None:intergenic 45.0%
! GAGATGGAATCAGCTTTGTG+GGG + chr3_4:66854033-66854052 None:intergenic 45.0%
GAGAGATGGAATCAGCTTTG+TGG + chr3_4:66854035-66854054 None:intergenic 45.0%
AAGGAGAAGGAAGAGAGAGA+TGG + chr3_4:66854049-66854068 None:intergenic 45.0%
!!! AATTTTTTTAAAATTAACAA+AGG - chr3_4:66849720-66849739 Msa0515580:intron 5.0%
!! ATTATATATAATTTAATGAA+AGG - chr3_4:66853294-66853313 Msa0515580:intron 5.0%
!! GTGGTTGGTGAAGAGAGTGA+AGG + chr3_4:66848129-66848148 None:intergenic 50.0%
ATTGAGCGAGGAAACGGAAC+TGG + chr3_4:66848265-66848284 None:intergenic 50.0%
AGAACGCAAGCAATTGAGCG+AGG + chr3_4:66848277-66848296 None:intergenic 50.0%
AGGAGAAGTTCGTGCTTCGA+GGG - chr3_4:66848427-66848446 Msa0515580:CDS 50.0%
GTTAGCTAGTGCTACAGCTG+TGG - chr3_4:66850294-66850313 Msa0515580:intron 50.0%
!! CCTTCTTCAGGGCATTGTTC+AGG + chr3_4:66850464-66850483 None:intergenic 50.0%
CCTGAACAATGCCCTGAAGA+AGG - chr3_4:66850461-66850480 Msa0515580:intron 50.0%
CAGGAAGTCTCCCTTCTTCA+GGG + chr3_4:66850475-66850494 None:intergenic 50.0%
AAATGATCCGCAGGTGAAGG+GGG + chr3_4:66850924-66850943 None:intergenic 50.0%
CAAATGATCCGCAGGTGAAG+GGG + chr3_4:66850925-66850944 None:intergenic 50.0%
GCAAATGATCCGCAGGTGAA+GGG + chr3_4:66850926-66850945 None:intergenic 50.0%
ACTTGACGCAAATGATCCGC+AGG + chr3_4:66850933-66850952 None:intergenic 50.0%
CCGAATGGGGTTGAATGACA+AGG - chr3_4:66850959-66850978 Msa0515580:CDS 50.0%
ATTATCTGGTGCGCACACAC+TGG - chr3_4:66851084-66851103 Msa0515580:CDS 50.0%
TTATCTGGTGCGCACACACT+GGG - chr3_4:66851085-66851104 Msa0515580:CDS 50.0%
TAACATCGGTCTCTGCTGAG+AGG - chr3_4:66851412-66851431 Msa0515580:intron 50.0%
AGTTAGTCGAGTGCTTAGGC+GGG + chr3_4:66851706-66851725 None:intergenic 50.0%
CCGTTTGTGTAGACCTTCCA+TGG - chr3_4:66852215-66852234 Msa0515580:intron 50.0%
GACAATCCTGGACTGCACAA+TGG - chr3_4:66852491-66852510 Msa0515580:intron 50.0%
! TATTTTGTTGGGAGGGGAGG+GGG - chr3_4:66852569-66852588 Msa0515580:intron 50.0%
GTATAGGAAGGGAAGAGGAG+AGG - chr3_4:66852605-66852624 Msa0515580:intron 50.0%
CATGCCAAACTCAGCAACCT+TGG - chr3_4:66852907-66852926 Msa0515580:intron 50.0%
TGCTCCAAGGTTGCTGAGTT+TGG + chr3_4:66852914-66852933 None:intergenic 50.0%
GTAGCAGCCAATTACTCCTC+TGG - chr3_4:66853204-66853223 Msa0515580:intron 50.0%
! GATACGGGCTGAATATGAGG+CGG - chr3_4:66853564-66853583 Msa0515580:CDS 50.0%
GTGATAGAGCCAGAGGACTA+AGG - chr3_4:66853917-66853936 Msa0515580:CDS 50.0%
GCCGGTGATTGTAGCCATTG+TGG + chr3_4:66848148-66848167 None:intergenic 55.0%
ACGGGAGGTTGAGAGTGAGA+CGG + chr3_4:66848211-66848230 None:intergenic 55.0%
GAGGAGAAGTTCGTGCTTCG+AGG - chr3_4:66848426-66848445 Msa0515580:CDS 55.0%
GGAGAAGTTCGTGCTTCGAG+GGG - chr3_4:66848428-66848447 Msa0515580:CDS 55.0%
! TTCGAGGGGACGATTCGGAA+CGG - chr3_4:66848442-66848461 Msa0515580:CDS 55.0%
! CGTTTGGGATGGCATGATGC+TGG - chr3_4:66850027-66850046 Msa0515580:intron 55.0%
ATTGAGGAGTGGCCACAGAG+AGG - chr3_4:66850066-66850085 Msa0515580:intron 55.0%
AGCTAGTGCTACAGCTGTGG+AGG - chr3_4:66850297-66850316 Msa0515580:intron 55.0%
CCAGGAAGTCTCCCTTCTTC+AGG + chr3_4:66850476-66850495 None:intergenic 55.0%
CCTGAAGAAGGGAGACTTCC+TGG - chr3_4:66850473-66850492 Msa0515580:intron 55.0%
AATGATCCGCAGGTGAAGGG+GGG + chr3_4:66850923-66850942 None:intergenic 55.0%
CGCAAATGATCCGCAGGTGA+AGG + chr3_4:66850927-66850946 None:intergenic 55.0%
TATCTGGTGCGCACACACTG+GGG - chr3_4:66851086-66851105 Msa0515580:CDS 55.0%
TGGCCCAACGGTTGTTAGGA+AGG + chr3_4:66851987-66852006 None:intergenic 55.0%
TCCAGATGTCACGTCCTCCT+GGG - chr3_4:66852034-66852053 Msa0515580:intron 55.0%
CAACGTGAACAGACCTCTGC+AGG + chr3_4:66852946-66852965 None:intergenic 55.0%
GCTGAATATGAGGCGGTTGG+CGG - chr3_4:66853571-66853590 Msa0515580:CDS 55.0%
TGAGAGTGAGACGGTGGCTC+TGG + chr3_4:66848202-66848221 None:intergenic 60.0%
GGAGGTTGAGAGTGAGACGG+TGG + chr3_4:66848208-66848227 None:intergenic 60.0%
CGTGCTTCGAGGGGACGATT+CGG - chr3_4:66848437-66848456 Msa0515580:CDS 60.0%
! GCACCGACACCTCTGATCGA+AGG - chr3_4:66849651-66849670 Msa0515580:intron 60.0%
! GCGCCTTCGATCAGAGGTGT+CGG + chr3_4:66849657-66849676 None:intergenic 60.0%
!! CCATTGGCTCCACCTCTCTG+TGG + chr3_4:66850081-66850100 None:intergenic 60.0%
CCACAGAGAGGTGGAGCCAA+TGG - chr3_4:66850078-66850097 Msa0515580:intron 60.0%
TAGACCAGACCGCAGTGGCT+GGG - chr3_4:66851114-66851133 Msa0515580:CDS 60.0%
GGTCTCTGCTGAGAGGCTTG+TGG - chr3_4:66851419-66851438 Msa0515580:intron 60.0%
GGTGTGCAGTCCTCACAAGC+TGG - chr3_4:66851911-66851930 Msa0515580:intron 60.0%
TGGGTGGCCCAACGGTTGTT+AGG + chr3_4:66851991-66852010 None:intergenic 60.0%
CTCCAGATGTCACGTCCTCC+TGG - chr3_4:66852033-66852052 Msa0515580:intron 60.0%
!! AAAGATGGGCCAGGAGCACC+TGG - chr3_4:66852466-66852485 Msa0515580:intron 60.0%
!! AAGATGGGCCAGGAGCACCT+GGG - chr3_4:66852467-66852486 Msa0515580:intron 60.0%
CGGGCTGAATATGAGGCGGT+TGG - chr3_4:66853568-66853587 Msa0515580:CDS 60.0%
GGTTGGCGGAAGCCCAGATA+AGG - chr3_4:66853585-66853604 Msa0515580:CDS 60.0%
GGAGGGAATCATGCGTGCGG+CGG + chr3_4:66848175-66848194 None:intergenic 65.0%
GGCGGAGGGAATCATGCGTG+CGG + chr3_4:66848178-66848197 None:intergenic 65.0%
!! TGAGACGGTGGCTCTGGTGG+CGG + chr3_4:66848196-66848215 None:intergenic 65.0%
!! GAGTGAGACGGTGGCTCTGG+TGG + chr3_4:66848199-66848218 None:intergenic 65.0%
! ACCTCTGATCGAAGGCGCGC+TGG - chr3_4:66849659-66849678 Msa0515580:intron 65.0%
ACCAGCGCGCCTTCGATCAG+AGG + chr3_4:66849663-66849682 None:intergenic 65.0%
GAGGAGTGGCCACAGAGAGG+TGG - chr3_4:66850069-66850088 Msa0515580:intron 65.0%
CGGTCTAGACCAGACCGCAG+TGG - chr3_4:66851109-66851128 Msa0515580:CDS 65.0%
CTAGACCAGACCGCAGTGGC+TGG - chr3_4:66851113-66851132 Msa0515580:CDS 65.0%
AGACCAGACCGCAGTGGCTG+GGG - chr3_4:66851115-66851134 Msa0515580:CDS 65.0%
CAGGTTTGCCCCAGCCACTG+CGG + chr3_4:66851126-66851145 None:intergenic 65.0%
CTCGATCGTGGGTGGCCCAA+CGG + chr3_4:66851999-66852018 None:intergenic 65.0%
CCACCCACGATCGAGCCACT+CGG - chr3_4:66852004-66852023 Msa0515580:CDS 65.0%
CACCCACGATCGAGCCACTC+GGG - chr3_4:66852005-66852024 Msa0515580:CDS 65.0%
GTCCCGAGTGGCTCGATCGT+GGG + chr3_4:66852010-66852029 None:intergenic 65.0%
TGTCCCGAGTGGCTCGATCG+TGG + chr3_4:66852011-66852030 None:intergenic 65.0%
! CATCTGGAGCGTGTCCCGAG+TGG + chr3_4:66852022-66852041 None:intergenic 65.0%
GCCCAGGAGGACGTGACATC+TGG + chr3_4:66852038-66852057 None:intergenic 65.0%
ATGTCACGTCCTCCTGGGCG+TGG - chr3_4:66852039-66852058 Msa0515580:intron 65.0%
TGTCACGTCCTCCTGGGCGT+GGG - chr3_4:66852040-66852059 Msa0515580:intron 65.0%
!! AGATGGGCCAGGAGCACCTG+GGG - chr3_4:66852468-66852487 Msa0515580:intron 65.0%
GATTGTCCCCCAGGTGCTCC+TGG + chr3_4:66852478-66852497 None:intergenic 65.0%
GAGCACCTGGGGGACAATCC+TGG - chr3_4:66852479-66852498 Msa0515580:intron 65.0%
GCAGTCCAGGATTGTCCCCC+AGG + chr3_4:66852487-66852506 None:intergenic 65.0%
GGGAATCATGCGTGCGGCGG+CGG + chr3_4:66848172-66848191 None:intergenic 70.0%
!! ACGGTGGCTCTGGTGGCGGA+GGG + chr3_4:66848192-66848211 None:intergenic 70.0%
TGCTGGCCCCCCTTCACCTG+CGG - chr3_4:66850914-66850933 Msa0515580:CDS 70.0%
CTGGTGCGCACACACTGGGG+CGG - chr3_4:66851089-66851108 Msa0515580:CDS 70.0%
TTGCCCCAGCCACTGCGGTC+TGG + chr3_4:66851121-66851140 None:intergenic 70.0%
CCGAGTGGCTCGATCGTGGG+TGG + chr3_4:66852007-66852026 None:intergenic 70.0%
GTCACGTCCTCCTGGGCGTG+GGG - chr3_4:66852041-66852060 Msa0515580:intron 70.0%
CACACTTCCCCACGCCCAGG+AGG + chr3_4:66852051-66852070 None:intergenic 70.0%
CTGCACACTTCCCCACGCCC+AGG + chr3_4:66852054-66852073 None:intergenic 70.0%
!! GATGGGCCAGGAGCACCTGG+GGG - chr3_4:66852469-66852488 Msa0515580:intron 70.0%
!! GACGGTGGCTCTGGTGGCGG+AGG + chr3_4:66848193-66848212 None:intergenic 75.0%
! CATGCGTGCGGCGGCGGCGC+CGG + chr3_4:66848166-66848185 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 66847740 66854318 66847740 ID=Msa0515580;Name=Msa0515580
chr3_4 mRNA 66847740 66854318 66847740 ID=Msa0515580-mRNA-1;Parent=Msa0515580;Name=Msa0515580-mRNA-1;_AED=0.06;_eAED=0.06;_QI=362|1|1|1|1|1|12|631|435
chr3_4 exon 66847740 66848523 66847740 ID=Msa0515580-mRNA-1:exon:17321;Parent=Msa0515580-mRNA-1
chr3_4 exon 66848828 66848899 66848828 ID=Msa0515580-mRNA-1:exon:17320;Parent=Msa0515580-mRNA-1
chr3_4 exon 66849107 66849211 66849107 ID=Msa0515580-mRNA-1:exon:17319;Parent=Msa0515580-mRNA-1
chr3_4 exon 66849304 66849381 66849304 ID=Msa0515580-mRNA-1:exon:17318;Parent=Msa0515580-mRNA-1
chr3_4 exon 66849518 66849592 66849518 ID=Msa0515580-mRNA-1:exon:17317;Parent=Msa0515580-mRNA-1
chr3_4 exon 66850899 66850985 66850899 ID=Msa0515580-mRNA-1:exon:17316;Parent=Msa0515580-mRNA-1
chr3_4 exon 66851078 66851145 66851078 ID=Msa0515580-mRNA-1:exon:17315;Parent=Msa0515580-mRNA-1
chr3_4 exon 66851564 66851651 66851564 ID=Msa0515580-mRNA-1:exon:17314;Parent=Msa0515580-mRNA-1
chr3_4 exon 66851740 66851840 66851740 ID=Msa0515580-mRNA-1:exon:17313;Parent=Msa0515580-mRNA-1
chr3_4 exon 66851914 66852034 66851914 ID=Msa0515580-mRNA-1:exon:17312;Parent=Msa0515580-mRNA-1
chr3_4 exon 66853505 66853636 66853505 ID=Msa0515580-mRNA-1:exon:17311;Parent=Msa0515580-mRNA-1
chr3_4 exon 66853729 66854318 66853729 ID=Msa0515580-mRNA-1:exon:17310;Parent=Msa0515580-mRNA-1
chr3_4 five_prime_UTR 66853957 66854318 66853957 ID=Msa0515580-mRNA-1:five_prime_utr;Parent=Msa0515580-mRNA-1
chr3_4 CDS 66853729 66853956 66853729 ID=Msa0515580-mRNA-1:cds;Parent=Msa0515580-mRNA-1
chr3_4 CDS 66853505 66853636 66853505 ID=Msa0515580-mRNA-1:cds;Parent=Msa0515580-mRNA-1
chr3_4 CDS 66851914 66852034 66851914 ID=Msa0515580-mRNA-1:cds;Parent=Msa0515580-mRNA-1
chr3_4 CDS 66851740 66851840 66851740 ID=Msa0515580-mRNA-1:cds;Parent=Msa0515580-mRNA-1
chr3_4 CDS 66851564 66851651 66851564 ID=Msa0515580-mRNA-1:cds;Parent=Msa0515580-mRNA-1
chr3_4 CDS 66851078 66851145 66851078 ID=Msa0515580-mRNA-1:cds;Parent=Msa0515580-mRNA-1
chr3_4 CDS 66850899 66850985 66850899 ID=Msa0515580-mRNA-1:cds;Parent=Msa0515580-mRNA-1
chr3_4 CDS 66849518 66849592 66849518 ID=Msa0515580-mRNA-1:cds;Parent=Msa0515580-mRNA-1
chr3_4 CDS 66849304 66849381 66849304 ID=Msa0515580-mRNA-1:cds;Parent=Msa0515580-mRNA-1
chr3_4 CDS 66849107 66849211 66849107 ID=Msa0515580-mRNA-1:cds;Parent=Msa0515580-mRNA-1
chr3_4 CDS 66848828 66848899 66848828 ID=Msa0515580-mRNA-1:cds;Parent=Msa0515580-mRNA-1
chr3_4 CDS 66848371 66848523 66848371 ID=Msa0515580-mRNA-1:cds;Parent=Msa0515580-mRNA-1
chr3_4 three_prime_UTR 66847740 66848370 66847740 ID=Msa0515580-mRNA-1:three_prime_utr;Parent=Msa0515580-mRNA-1
Gene Sequence

>Msa0515580

ATGGCAGAGCGTGTGTTACTCACTCCTTCACTCTCTTCACCAACCACAATGGCTACAATCACCGGCGCCGCCGCCGCACGCATGATTCCCTCCGCCACCAGAGCCACCGTCTCACTCTCAACCTCCCGTTCGTTCTTCTCATTTTCATCGTCATCTTCTTCCAGTTCCGTTTCCTCGCTCAATTGCTTGCGTTCTTCTCCTCGCATTTCTCACATCTTTCTCAATCAGCGAAGAGGAGAAGTTCGTGCTTCGAGGGGACGATTCGGAACGGTTGCGTTTGCGTCTGATCCTGATCAGTTGAAAAGCGCTAGAGAAGATATCAAGGAGCTTCTTAAGACTAAGTTCTGTCATCCTCTTTTGATTCGTTTGGGATGGCATGATGCTGGTACCTATAATAAGAATATTGAGGAGTGGCCACAGAGAGGTGGAGCCAATGGTAGCTTAAGATTTGAAGTTGAGTTGAAACATGGAGCCAATGCTGGCCTTGTAAATGCATTGAAACTTCTCCAGCCAATCAAAGACAAATATTCAGGCGTGACATATGCAGACTTATTTCAGTTAGCTAGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCAAAAATTCCCATGAAATATGGAAGAGTAGACGTCACTGGACCTGAACAATGCCCTGAAGAAGGGAGACTTCCTGATGCTGGCCCCCCTTCACCTGCGGATCATTTGCGTCAAGTTTTCTACCGAATGGGGTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGGGCGGTCTAGACCAGACCGCAGTGGCTGGGGCAAACCTGAGACTAAATACACGAAAGATGGGCCAGGAGCACCTGGGGGACAATCCTGGACTGCACAATGGTTAAAGTTTGACAACTCTTACTTCAAGGACATCAAAGAAAAAAAGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTCTTTTTGACGATCCTTCCTTCAAGGTATATGCTGAGAAATATGCTGTAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTCAGCAACCTTGGAGCAAAGTTTGAACCTGCAGAGGGCATTGTGGTAGATGGTTCTCCAAATGTAGTGGGAGAGAAGTTTGTAGCAGCCAATTACTCCTCTGGAAAGAAAGAGCTGTCTGATGCTATGAGGAAGAAGATACGGGCTGAATATGAGGCGGTTGGCGGAAGCCCAGATAAGGCTCTAAAGTCAAACTATTTCCTAAACATCATAATTGTTATTGCTGCTTTGGCTATTTTGACATATCTGTTTGGAAACTAA
Protein sequence

>Msa0515580

MAERVLLTPSLSSPTTMATITGAAAARMIPSATRATVSLSTSRSFFSFSSSSSSSSVSSLNCLRSSPRISHIFLNQRRGEVRASRGRFGTVAFASDPDQLKSAREDIKELLKTKFCHPLLIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLASATAVEEAGGPKIPMKYGRVDVTGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFDDPSFKVYAEKYAVDQEAFFKDYAEAHAKLSNLGAKFEPAEGIVVDGSPNVVGEKFVAANYSSGKKELSDAMRKKIRAEYEAVGGSPDKALKSNYFLNIIIVIAALAILTYLFGN*