Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0257300 | XP_003596607.1 | 98.949 | 761 | 8 | 0 | 1 | 761 | 1 | 761 | 0.0 | 1551 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0257300 | sp|P46875|KN14N_ARATH | 65.495 | 768 | 240 | 6 | 1 | 759 | 1 | 752 | 0.0 | 1013 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0257300 | G7IHD4 | 98.949 | 761 | 8 | 0 | 1 | 761 | 1 | 761 | 0.0 | 1551 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0217460 | Msa0257300 | 0.852210 | 5.359459e-61 | -8.615850e-47 |
Msa0257300 | Msa0296600 | 0.938470 | 6.376669e-99 | -8.615850e-47 |
Msa0257300 | Msa0334990 | 0.939901 | 5.817079e-100 | -8.615850e-47 |
Msa0257300 | Msa0451170 | 0.807507 | 4.887361e-50 | -8.615850e-47 |
Msa0257300 | Msa0580940 | 0.809099 | 2.236806e-50 | -8.615850e-47 |
Msa0257300 | Msa1166190 | 0.801348 | 9.392278e-49 | -8.615850e-47 |
Msa0257300 | Msa1166290 | 0.802382 | 5.762216e-49 | -8.615850e-47 |
Msa0257300 | Msa1187760 | 0.825039 | 5.824385e-54 | -8.615850e-47 |
Msa0257300 | Msa1216090 | 0.805434 | 1.337584e-49 | -8.615850e-47 |
Msa0257300 | Msa1408160 | 0.821529 | 3.847537e-53 | -8.615850e-47 |
Msa0257300 | Msa1448960 | 0.816763 | 4.676627e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0257300 | MtrunA17_Chr2g0319271 | 98.949 | 761 | 8 | 0 | 1 | 761 | 1 | 761 | 0.0 | 1551 |
Msa0257300 | MtrunA17_Chr4g0042061 | 80.971 | 762 | 142 | 3 | 1 | 761 | 34 | 793 | 0.0 | 1278 |
Msa0257300 | MtrunA17_Chr2g0280421 | 58.115 | 764 | 297 | 7 | 6 | 760 | 37 | 786 | 0.0 | 857 |
Msa0257300 | MtrunA17_Chr4g0049011 | 60.799 | 551 | 190 | 6 | 214 | 750 | 94 | 632 | 0.0 | 646 |
Msa0257300 | MtrunA17_Chr1g0191851 | 44.527 | 402 | 197 | 7 | 352 | 747 | 97 | 478 | 1.17e-95 | 314 |
Msa0257300 | MtrunA17_Chr2g0312631 | 44.652 | 374 | 191 | 5 | 374 | 747 | 359 | 716 | 8.46e-92 | 309 |
Msa0257300 | MtrunA17_Chr7g0272871 | 45.833 | 384 | 182 | 9 | 371 | 747 | 94 | 458 | 1.47e-90 | 299 |
Msa0257300 | MtrunA17_Chr1g0195111 | 44.032 | 377 | 173 | 9 | 387 | 751 | 384 | 734 | 1.11e-88 | 300 |
Msa0257300 | MtrunA17_Chr5g0411971 | 39.362 | 470 | 260 | 8 | 283 | 747 | 279 | 728 | 8.01e-88 | 299 |
Msa0257300 | MtrunA17_Chr5g0421521 | 37.773 | 503 | 280 | 11 | 248 | 747 | 231 | 703 | 8.84e-87 | 294 |
Msa0257300 | MtrunA17_Chr5g0421591 | 43.081 | 383 | 199 | 5 | 365 | 747 | 340 | 703 | 1.01e-86 | 293 |
Msa0257300 | MtrunA17_Chr7g0271961 | 43.869 | 367 | 173 | 7 | 387 | 746 | 389 | 729 | 1.05e-85 | 292 |
Msa0257300 | MtrunA17_Chr1g0192481 | 43.869 | 367 | 179 | 9 | 387 | 746 | 46 | 392 | 5.04e-85 | 280 |
Msa0257300 | MtrunA17_Chr5g0407791 | 36.129 | 465 | 269 | 8 | 283 | 739 | 765 | 1209 | 3.80e-80 | 280 |
Msa0257300 | MtrunA17_Chr7g0257301 | 37.939 | 456 | 232 | 12 | 322 | 746 | 314 | 749 | 9.09e-79 | 273 |
Msa0257300 | MtrunA17_Chr8g0369881 | 38.710 | 372 | 207 | 5 | 381 | 752 | 857 | 1207 | 1.40e-78 | 275 |
Msa0257300 | MtrunA17_Chr5g0447041 | 40.250 | 400 | 187 | 10 | 387 | 746 | 422 | 809 | 1.02e-76 | 269 |
Msa0257300 | MtrunA17_Chr3g0102921 | 40.811 | 370 | 194 | 7 | 387 | 744 | 426 | 782 | 4.04e-76 | 267 |
Msa0257300 | MtrunA17_Chr1g0191181 | 38.320 | 381 | 217 | 6 | 362 | 741 | 51 | 414 | 1.38e-73 | 251 |
Msa0257300 | MtrunA17_Chr1g0182151 | 39.255 | 349 | 192 | 8 | 399 | 736 | 54 | 393 | 9.24e-61 | 222 |
Msa0257300 | MtrunA17_Chr1g0178411 | 38.719 | 359 | 186 | 11 | 399 | 737 | 13 | 357 | 6.71e-60 | 219 |
Msa0257300 | MtrunA17_Chr4g0045381 | 39.889 | 361 | 173 | 12 | 396 | 736 | 190 | 526 | 1.43e-59 | 219 |
Msa0257300 | MtrunA17_Chr2g0327581 | 37.047 | 359 | 206 | 8 | 390 | 737 | 39 | 388 | 1.52e-59 | 218 |
Msa0257300 | MtrunA17_Chr7g0266631 | 37.989 | 358 | 190 | 10 | 399 | 737 | 9 | 353 | 1.07e-58 | 215 |
Msa0257300 | MtrunA17_Chr2g0322291 | 38.504 | 361 | 174 | 10 | 399 | 737 | 88 | 422 | 6.38e-56 | 208 |
Msa0257300 | MtrunA17_Chr3g0122121 | 37.845 | 362 | 178 | 11 | 400 | 739 | 99 | 435 | 1.22e-55 | 207 |
Msa0257300 | MtrunA17_Chr4g0069141 | 37.534 | 365 | 190 | 9 | 390 | 737 | 144 | 487 | 4.09e-55 | 206 |
Msa0257300 | MtrunA17_Chr3g0134191 | 36.264 | 364 | 194 | 11 | 400 | 737 | 9 | 360 | 8.89e-54 | 201 |
Msa0257300 | MtrunA17_Chr4g0053211 | 35.676 | 370 | 194 | 11 | 399 | 737 | 12 | 368 | 2.16e-53 | 200 |
Msa0257300 | MtrunA17_Chr8g0367581 | 35.989 | 364 | 206 | 5 | 386 | 749 | 133 | 469 | 4.82e-53 | 199 |
Msa0257300 | MtrunA17_Chr1g0153061 | 36.538 | 364 | 193 | 12 | 400 | 737 | 9 | 360 | 7.60e-53 | 198 |
Msa0257300 | MtrunA17_Chr8g0377731 | 38.147 | 367 | 167 | 12 | 400 | 739 | 56 | 389 | 1.60e-52 | 197 |
Msa0257300 | MtrunA17_Chr1g0193221 | 36.467 | 351 | 179 | 9 | 400 | 737 | 4 | 323 | 2.18e-51 | 194 |
Msa0257300 | MtrunA17_Chr5g0427481 | 35.159 | 347 | 206 | 8 | 400 | 737 | 18 | 354 | 2.62e-51 | 194 |
Msa0257300 | MtrunA17_Chr3g0132921 | 34.286 | 350 | 204 | 9 | 399 | 736 | 9 | 344 | 1.18e-50 | 186 |
Msa0257300 | MtrunA17_Chr2g0307481 | 37.861 | 346 | 184 | 9 | 400 | 736 | 69 | 392 | 1.80e-49 | 184 |
Msa0257300 | MtrunA17_Chr8g0386891 | 52.727 | 165 | 78 | 0 | 588 | 752 | 4 | 168 | 2.94e-48 | 176 |
Msa0257300 | MtrunA17_Chr1g0152231 | 35.511 | 352 | 188 | 9 | 400 | 737 | 4 | 330 | 1.12e-46 | 178 |
Msa0257300 | MtrunA17_Chr7g0269681 | 48.837 | 172 | 88 | 0 | 580 | 751 | 33 | 204 | 5.68e-46 | 171 |
Msa0257300 | MtrunA17_Chr6g0484501 | 50.820 | 183 | 90 | 0 | 570 | 752 | 16 | 198 | 9.04e-46 | 163 |
Msa0257300 | MtrunA17_Chr4g0062291 | 35.694 | 353 | 187 | 11 | 400 | 737 | 124 | 451 | 5.04e-45 | 172 |
Msa0257300 | MtrunA17_Chr6g0483701 | 34.884 | 301 | 165 | 6 | 442 | 736 | 73 | 348 | 2.11e-43 | 169 |
Msa0257300 | MtrunA17_Chr3g0145071 | 35.511 | 352 | 195 | 10 | 399 | 746 | 99 | 422 | 4.14e-43 | 168 |
Msa0257300 | MtrunA17_Chr4g0035661 | 35.311 | 354 | 197 | 10 | 397 | 746 | 87 | 412 | 1.48e-42 | 167 |
Msa0257300 | MtrunA17_Chr4g0036001 | 33.690 | 374 | 192 | 11 | 380 | 734 | 4 | 340 | 8.85e-42 | 164 |
Msa0257300 | MtrunA17_Chr5g0405181 | 33.427 | 356 | 180 | 11 | 400 | 735 | 21 | 339 | 1.85e-40 | 160 |
Msa0257300 | MtrunA17_Chr8g0372171 | 33.427 | 356 | 180 | 11 | 400 | 735 | 20 | 338 | 2.25e-40 | 160 |
Msa0257300 | MtrunA17_Chr5g0445211 | 34.824 | 313 | 168 | 6 | 446 | 737 | 109 | 406 | 3.68e-40 | 159 |
Msa0257300 | MtrunA17_Chr6g0485471 | 34.254 | 362 | 192 | 10 | 400 | 747 | 116 | 445 | 3.76e-40 | 157 |
Msa0257300 | MtrunA17_Chr7g0258991 | 35.028 | 354 | 192 | 12 | 397 | 742 | 71 | 394 | 5.10e-40 | 159 |
Msa0257300 | MtrunA17_Chr3g0101021 | 33.241 | 361 | 189 | 10 | 399 | 737 | 75 | 405 | 5.31e-40 | 159 |
Msa0257300 | MtrunA17_Chr5g0398521 | 30.000 | 370 | 213 | 9 | 396 | 741 | 54 | 401 | 6.85e-40 | 158 |
Msa0257300 | MtrunA17_Chr8g0390991 | 52.830 | 159 | 75 | 0 | 588 | 746 | 4 | 162 | 9.83e-40 | 155 |
Msa0257300 | MtrunA17_Chr4g0070001 | 32.787 | 366 | 201 | 10 | 382 | 742 | 136 | 461 | 6.26e-39 | 155 |
Msa0257300 | MtrunA17_Chr2g0331761 | 33.799 | 358 | 191 | 10 | 400 | 743 | 186 | 511 | 6.99e-39 | 154 |
Msa0257300 | MtrunA17_Chr2g0295881 | 33.416 | 401 | 205 | 16 | 374 | 747 | 176 | 541 | 4.56e-38 | 152 |
Msa0257300 | MtrunA17_Chr7g0245931 | 30.728 | 371 | 208 | 11 | 396 | 741 | 49 | 395 | 8.04e-38 | 152 |
Msa0257300 | MtrunA17_Chr3g0142261 | 33.523 | 352 | 184 | 10 | 400 | 735 | 20 | 337 | 1.10e-37 | 152 |
Msa0257300 | MtrunA17_Chr4g0067421 | 31.316 | 380 | 205 | 11 | 400 | 754 | 206 | 554 | 7.49e-37 | 148 |
Msa0257300 | MtrunA17_Chr7g0238581 | 30.894 | 369 | 212 | 10 | 400 | 758 | 26 | 361 | 3.53e-35 | 142 |
Msa0257300 | MtrunA17_Chr6g0484511 | 43.195 | 169 | 80 | 4 | 387 | 548 | 277 | 436 | 2.28e-34 | 137 |
Msa0257300 | MtrunA17_Chr8g0390981 | 34.014 | 294 | 157 | 10 | 266 | 548 | 395 | 662 | 1.57e-33 | 137 |
Msa0257300 | MtrunA17_Chr7g0269691 | 43.605 | 172 | 74 | 6 | 387 | 548 | 388 | 546 | 2.54e-33 | 135 |
Msa0257300 | MtrunA17_Chr8g0386901 | 31.454 | 337 | 190 | 10 | 224 | 548 | 324 | 631 | 2.61e-30 | 127 |
Msa0257300 | MtrunA17_Chr1g0187411 | 28.228 | 333 | 207 | 10 | 430 | 745 | 155 | 472 | 3.52e-26 | 115 |
Msa0257300 | MtrunA17_Chr6g0470541 | 26.087 | 276 | 177 | 5 | 446 | 719 | 51 | 301 | 2.28e-17 | 87.0 |
Msa0257300 | MtrunA17_Chr3g0142841 | 27.575 | 301 | 154 | 11 | 448 | 726 | 145 | 403 | 4.31e-17 | 86.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0257300 | AT5G54670.1 | 65.495 | 768 | 240 | 6 | 1 | 759 | 1 | 752 | 0.0 | 1013 |
Msa0257300 | AT5G54670.2 | 65.495 | 768 | 240 | 6 | 1 | 759 | 1 | 752 | 0.0 | 1013 |
Msa0257300 | AT4G27180.1 | 63.979 | 769 | 241 | 6 | 1 | 759 | 1 | 743 | 0.0 | 984 |
Msa0257300 | AT4G27180.2 | 63.979 | 769 | 241 | 6 | 1 | 759 | 1 | 743 | 0.0 | 984 |
Msa0257300 | AT5G54670.3 | 66.572 | 703 | 213 | 4 | 64 | 759 | 5 | 692 | 0.0 | 948 |
Msa0257300 | AT4G21270.1 | 63.058 | 739 | 260 | 3 | 34 | 760 | 55 | 792 | 0.0 | 922 |
Msa0257300 | AT4G05190.2 | 61.631 | 748 | 274 | 3 | 25 | 760 | 30 | 776 | 0.0 | 910 |
Msa0257300 | AT4G05190.1 | 61.995 | 742 | 269 | 3 | 31 | 760 | 49 | 789 | 0.0 | 909 |
Msa0257300 | AT1G72250.1 | 41.264 | 538 | 269 | 16 | 233 | 747 | 311 | 824 | 1.38e-98 | 331 |
Msa0257300 | AT1G72250.2 | 44.804 | 433 | 205 | 10 | 328 | 747 | 422 | 833 | 1.88e-98 | 331 |
Msa0257300 | AT1G72250.3 | 44.804 | 433 | 205 | 10 | 328 | 747 | 434 | 845 | 3.30e-98 | 330 |
Msa0257300 | AT1G72250.4 | 44.804 | 433 | 205 | 10 | 328 | 747 | 433 | 844 | 3.50e-98 | 330 |
Msa0257300 | AT2G22610.2 | 45.244 | 389 | 188 | 7 | 360 | 747 | 382 | 746 | 2.80e-94 | 317 |
Msa0257300 | AT2G22610.1 | 45.244 | 389 | 188 | 7 | 360 | 747 | 382 | 746 | 2.81e-94 | 317 |
Msa0257300 | AT2G22610.3 | 45.244 | 389 | 188 | 7 | 360 | 747 | 383 | 747 | 4.23e-94 | 317 |
Msa0257300 | AT5G27550.2 | 43.675 | 419 | 213 | 6 | 330 | 747 | 67 | 463 | 5.42e-94 | 310 |
Msa0257300 | AT5G27550.1 | 43.675 | 419 | 213 | 6 | 330 | 747 | 67 | 463 | 5.42e-94 | 310 |
Msa0257300 | AT1G73860.2 | 44.974 | 378 | 172 | 7 | 387 | 752 | 414 | 767 | 6.59e-90 | 303 |
Msa0257300 | AT1G73860.1 | 45.600 | 375 | 174 | 7 | 387 | 752 | 497 | 850 | 8.42e-89 | 301 |
Msa0257300 | AT1G63640.5 | 39.504 | 524 | 258 | 15 | 258 | 752 | 309 | 802 | 1.26e-88 | 301 |
Msa0257300 | AT1G63640.1 | 45.867 | 375 | 172 | 7 | 387 | 752 | 460 | 812 | 1.30e-88 | 301 |
Msa0257300 | AT1G63640.4 | 45.867 | 375 | 172 | 7 | 387 | 752 | 460 | 812 | 1.30e-88 | 301 |
Msa0257300 | AT1G63640.3 | 45.867 | 375 | 172 | 7 | 387 | 752 | 460 | 812 | 1.33e-88 | 301 |
Msa0257300 | AT1G18410.5 | 36.825 | 630 | 314 | 20 | 150 | 752 | 239 | 811 | 3.64e-88 | 299 |
Msa0257300 | AT1G18410.3 | 36.767 | 631 | 321 | 21 | 150 | 752 | 249 | 829 | 5.23e-88 | 299 |
Msa0257300 | AT1G18410.2 | 36.767 | 631 | 321 | 21 | 150 | 752 | 249 | 829 | 5.23e-88 | 299 |
Msa0257300 | AT5G41310.1 | 44.675 | 385 | 162 | 8 | 377 | 752 | 402 | 744 | 5.41e-88 | 298 |
Msa0257300 | AT1G09170.3 | 40.930 | 430 | 214 | 10 | 326 | 746 | 368 | 766 | 6.04e-88 | 295 |
Msa0257300 | AT1G09170.7 | 40.930 | 430 | 214 | 10 | 326 | 746 | 368 | 766 | 6.04e-88 | 295 |
Msa0257300 | AT1G09170.4 | 40.930 | 430 | 214 | 10 | 326 | 746 | 368 | 766 | 7.94e-88 | 295 |
Msa0257300 | AT2G47500.2 | 44.780 | 364 | 177 | 6 | 387 | 746 | 387 | 730 | 8.46e-88 | 297 |
Msa0257300 | AT1G09170.2 | 40.984 | 427 | 218 | 10 | 326 | 746 | 368 | 766 | 1.62e-87 | 295 |
Msa0257300 | AT2G47500.1 | 44.780 | 364 | 177 | 6 | 387 | 746 | 387 | 730 | 1.80e-87 | 297 |
Msa0257300 | AT1G18410.4 | 36.767 | 631 | 321 | 21 | 150 | 752 | 392 | 972 | 7.60e-87 | 298 |
Msa0257300 | AT1G18410.1 | 36.667 | 630 | 315 | 20 | 150 | 752 | 392 | 964 | 9.51e-87 | 297 |
Msa0257300 | AT1G63640.2 | 45.600 | 375 | 166 | 7 | 387 | 752 | 460 | 805 | 1.02e-86 | 296 |
Msa0257300 | AT1G09170.5 | 40.930 | 430 | 214 | 10 | 326 | 746 | 368 | 766 | 1.33e-86 | 295 |
Msa0257300 | AT5G27000.1 | 41.204 | 432 | 211 | 10 | 326 | 746 | 328 | 727 | 4.40e-86 | 293 |
Msa0257300 | AT3G10310.2 | 41.844 | 423 | 212 | 13 | 337 | 746 | 294 | 695 | 3.29e-82 | 282 |
Msa0257300 | AT3G10310.1 | 41.844 | 423 | 212 | 13 | 337 | 746 | 294 | 695 | 3.68e-82 | 282 |
Msa0257300 | AT3G44730.1 | 38.710 | 434 | 216 | 12 | 335 | 746 | 306 | 711 | 1.98e-79 | 276 |
Msa0257300 | AT3G44730.4 | 38.710 | 434 | 216 | 12 | 335 | 746 | 306 | 711 | 1.98e-79 | 276 |
Msa0257300 | AT3G44730.2 | 38.710 | 434 | 216 | 12 | 335 | 746 | 351 | 756 | 2.42e-79 | 276 |
Msa0257300 | AT3G44730.3 | 38.710 | 434 | 216 | 12 | 335 | 746 | 351 | 756 | 2.42e-79 | 276 |
Msa0257300 | AT5G65930.1 | 31.770 | 661 | 366 | 18 | 84 | 737 | 623 | 1205 | 2.51e-77 | 272 |
Msa0257300 | AT5G65930.3 | 39.782 | 367 | 201 | 5 | 371 | 737 | 866 | 1212 | 2.78e-77 | 271 |
Msa0257300 | AT5G65930.2 | 39.782 | 367 | 201 | 5 | 371 | 737 | 860 | 1206 | 2.83e-77 | 271 |
Msa0257300 | AT1G55550.1 | 37.469 | 403 | 225 | 8 | 346 | 743 | 34 | 414 | 5.53e-75 | 260 |
Msa0257300 | AT1G09170.6 | 40.513 | 390 | 192 | 10 | 326 | 706 | 368 | 726 | 6.37e-74 | 255 |
Msa0257300 | AT1G09170.8 | 40.513 | 390 | 192 | 10 | 326 | 706 | 368 | 726 | 6.37e-74 | 255 |
Msa0257300 | AT5G27950.1 | 38.058 | 381 | 218 | 6 | 362 | 741 | 42 | 405 | 1.19e-72 | 249 |
Msa0257300 | AT1G09170.1 | 37.674 | 430 | 192 | 10 | 326 | 746 | 368 | 730 | 5.28e-72 | 254 |
Msa0257300 | AT2G36200.1 | 39.106 | 358 | 186 | 10 | 399 | 737 | 12 | 356 | 3.07e-61 | 223 |
Msa0257300 | AT2G36200.2 | 39.106 | 358 | 186 | 10 | 399 | 737 | 12 | 356 | 5.20e-61 | 223 |
Msa0257300 | AT3G19050.1 | 39.554 | 359 | 179 | 10 | 396 | 737 | 190 | 527 | 7.61e-60 | 221 |
Msa0257300 | AT2G37420.1 | 38.395 | 349 | 196 | 9 | 399 | 737 | 48 | 387 | 7.73e-60 | 219 |
Msa0257300 | AT2G37420.2 | 38.395 | 349 | 196 | 9 | 399 | 737 | 48 | 387 | 7.73e-60 | 219 |
Msa0257300 | AT3G45850.2 | 38.527 | 353 | 190 | 10 | 399 | 737 | 55 | 394 | 9.49e-60 | 219 |
Msa0257300 | AT3G45850.1 | 38.527 | 353 | 190 | 10 | 399 | 737 | 55 | 394 | 9.49e-60 | 219 |
Msa0257300 | AT2G28620.3 | 36.872 | 358 | 189 | 11 | 399 | 737 | 50 | 389 | 2.71e-57 | 212 |
Msa0257300 | AT2G28620.2 | 36.872 | 358 | 189 | 11 | 399 | 737 | 50 | 389 | 2.71e-57 | 212 |
Msa0257300 | AT2G28620.1 | 36.872 | 358 | 189 | 11 | 399 | 737 | 50 | 389 | 3.15e-57 | 212 |
Msa0257300 | AT3G17360.2 | 38.827 | 358 | 177 | 11 | 399 | 737 | 168 | 502 | 1.57e-56 | 211 |
Msa0257300 | AT3G17360.1 | 38.827 | 358 | 177 | 11 | 399 | 737 | 168 | 502 | 1.58e-56 | 211 |
Msa0257300 | AT3G17360.3 | 38.827 | 358 | 177 | 11 | 399 | 737 | 168 | 502 | 1.72e-56 | 211 |
Msa0257300 | AT5G65460.6 | 35.613 | 351 | 199 | 5 | 386 | 736 | 125 | 448 | 1.23e-54 | 204 |
Msa0257300 | AT5G65460.2 | 35.613 | 351 | 199 | 5 | 386 | 736 | 125 | 448 | 1.54e-54 | 204 |
Msa0257300 | AT5G65460.1 | 35.613 | 351 | 199 | 5 | 386 | 736 | 125 | 448 | 1.83e-54 | 204 |
Msa0257300 | AT5G65460.4 | 35.613 | 351 | 199 | 5 | 386 | 736 | 125 | 448 | 2.00e-54 | 204 |
Msa0257300 | AT4G14150.1 | 37.293 | 362 | 177 | 11 | 400 | 739 | 92 | 425 | 2.71e-54 | 203 |
Msa0257300 | AT3G44050.1 | 38.202 | 356 | 182 | 10 | 399 | 737 | 93 | 427 | 3.44e-54 | 203 |
Msa0257300 | AT5G47820.2 | 37.158 | 366 | 194 | 12 | 399 | 737 | 11 | 367 | 3.67e-54 | 202 |
Msa0257300 | AT5G47820.1 | 37.158 | 366 | 194 | 12 | 399 | 737 | 11 | 367 | 3.67e-54 | 202 |
Msa0257300 | AT5G65460.3 | 35.211 | 355 | 202 | 5 | 386 | 736 | 125 | 455 | 5.58e-54 | 202 |
Msa0257300 | AT3G23670.2 | 37.293 | 362 | 177 | 11 | 400 | 739 | 97 | 430 | 7.18e-54 | 201 |
Msa0257300 | AT3G23670.1 | 37.293 | 362 | 177 | 11 | 400 | 739 | 97 | 430 | 1.10e-53 | 202 |
Msa0257300 | AT5G10470.2 | 35.897 | 351 | 198 | 7 | 386 | 736 | 129 | 452 | 1.06e-52 | 199 |
Msa0257300 | AT5G10470.1 | 35.897 | 351 | 198 | 7 | 386 | 736 | 129 | 452 | 1.11e-52 | 199 |
Msa0257300 | AT3G50240.2 | 36.585 | 369 | 186 | 12 | 400 | 737 | 26 | 377 | 5.55e-52 | 196 |
Msa0257300 | AT3G50240.4 | 36.141 | 368 | 189 | 10 | 400 | 737 | 26 | 377 | 1.09e-51 | 195 |
Msa0257300 | AT3G50240.1 | 36.585 | 369 | 186 | 12 | 400 | 737 | 26 | 377 | 1.22e-51 | 195 |
Msa0257300 | AT3G10180.2 | 36.182 | 351 | 181 | 7 | 400 | 737 | 4 | 324 | 1.80e-50 | 192 |
Msa0257300 | AT3G10180.1 | 36.182 | 351 | 181 | 7 | 400 | 737 | 4 | 324 | 1.95e-50 | 192 |
Msa0257300 | AT1G59540.1 | 36.628 | 344 | 185 | 8 | 400 | 736 | 4 | 321 | 3.50e-48 | 183 |
Msa0257300 | AT3G63480.2 | 35.519 | 366 | 189 | 14 | 399 | 746 | 3 | 339 | 1.00e-47 | 176 |
Msa0257300 | AT5G60930.1 | 34.160 | 363 | 202 | 10 | 400 | 737 | 7 | 357 | 1.27e-47 | 183 |
Msa0257300 | AT5G60930.3 | 34.160 | 363 | 202 | 10 | 400 | 737 | 7 | 357 | 2.09e-47 | 182 |
Msa0257300 | AT5G60930.2 | 33.884 | 363 | 203 | 10 | 400 | 737 | 7 | 357 | 2.61e-47 | 182 |
Msa0257300 | AT3G63480.1 | 36.339 | 366 | 190 | 15 | 399 | 746 | 3 | 343 | 2.97e-47 | 175 |
Msa0257300 | AT1G18370.1 | 33.711 | 353 | 185 | 10 | 400 | 737 | 32 | 350 | 5.69e-44 | 171 |
Msa0257300 | AT2G21380.2 | 35.135 | 370 | 204 | 11 | 383 | 746 | 88 | 427 | 2.01e-43 | 170 |
Msa0257300 | AT2G21380.1 | 35.135 | 370 | 204 | 11 | 383 | 746 | 88 | 427 | 2.01e-43 | 170 |
Msa0257300 | AT4G39050.1 | 35.135 | 370 | 204 | 11 | 383 | 746 | 82 | 421 | 2.94e-43 | 169 |
Msa0257300 | AT5G06670.2 | 35.775 | 355 | 194 | 12 | 394 | 742 | 61 | 387 | 4.18e-43 | 169 |
Msa0257300 | AT5G06670.3 | 35.775 | 355 | 194 | 12 | 394 | 742 | 61 | 387 | 4.18e-43 | 169 |
Msa0257300 | AT1G18550.1 | 34.957 | 349 | 194 | 10 | 400 | 737 | 152 | 478 | 4.36e-43 | 167 |
Msa0257300 | AT5G06670.8 | 35.775 | 355 | 194 | 12 | 394 | 742 | 61 | 387 | 4.82e-43 | 167 |
Msa0257300 | AT5G06670.4 | 35.775 | 355 | 194 | 12 | 394 | 742 | 61 | 387 | 4.82e-43 | 167 |
Msa0257300 | AT5G06670.7 | 35.775 | 355 | 194 | 12 | 394 | 742 | 61 | 387 | 4.82e-43 | 167 |
Msa0257300 | AT5G06670.5 | 35.775 | 355 | 194 | 12 | 394 | 742 | 61 | 387 | 4.82e-43 | 167 |
Msa0257300 | AT1G21730.1 | 36.313 | 358 | 194 | 11 | 395 | 746 | 71 | 400 | 8.36e-43 | 167 |
Msa0257300 | AT3G54870.2 | 35.016 | 317 | 165 | 10 | 440 | 737 | 144 | 438 | 1.17e-42 | 167 |
Msa0257300 | AT3G54870.3 | 35.016 | 317 | 165 | 10 | 440 | 737 | 144 | 438 | 1.23e-42 | 167 |
Msa0257300 | AT3G54870.1 | 35.016 | 317 | 165 | 10 | 440 | 737 | 144 | 438 | 1.24e-42 | 167 |
Msa0257300 | AT5G66310.2 | 34.659 | 352 | 181 | 11 | 400 | 735 | 19 | 337 | 7.56e-42 | 165 |
Msa0257300 | AT5G66310.3 | 34.659 | 352 | 181 | 11 | 400 | 735 | 19 | 337 | 7.56e-42 | 165 |
Msa0257300 | AT5G66310.1 | 34.659 | 352 | 181 | 11 | 400 | 735 | 19 | 337 | 7.56e-42 | 165 |
Msa0257300 | AT5G06670.6 | 35.165 | 364 | 193 | 13 | 394 | 742 | 61 | 396 | 1.20e-41 | 164 |
Msa0257300 | AT5G06670.1 | 35.165 | 364 | 193 | 13 | 394 | 742 | 61 | 396 | 1.20e-41 | 164 |
Msa0257300 | AT3G51150.2 | 34.270 | 356 | 177 | 11 | 400 | 735 | 18 | 336 | 1.35e-41 | 164 |
Msa0257300 | AT3G51150.4 | 34.270 | 356 | 177 | 11 | 400 | 735 | 18 | 336 | 1.35e-41 | 164 |
Msa0257300 | AT3G51150.3 | 34.270 | 356 | 177 | 11 | 400 | 735 | 18 | 336 | 1.35e-41 | 164 |
Msa0257300 | AT3G51150.1 | 34.270 | 356 | 177 | 11 | 400 | 735 | 18 | 336 | 1.43e-41 | 164 |
Msa0257300 | AT3G49650.1 | 34.323 | 303 | 174 | 5 | 446 | 744 | 66 | 347 | 2.58e-41 | 162 |
Msa0257300 | AT3G12020.4 | 34.091 | 352 | 198 | 11 | 397 | 742 | 67 | 390 | 8.13e-41 | 161 |
Msa0257300 | AT3G12020.1 | 34.091 | 352 | 198 | 11 | 397 | 742 | 67 | 390 | 8.13e-41 | 161 |
Msa0257300 | AT3G50240.3 | 38.489 | 278 | 141 | 6 | 485 | 737 | 3 | 275 | 8.24e-41 | 161 |
Msa0257300 | AT3G12020.3 | 34.091 | 352 | 198 | 11 | 397 | 742 | 67 | 390 | 1.76e-40 | 160 |
Msa0257300 | AT3G12020.2 | 34.091 | 352 | 198 | 11 | 397 | 742 | 67 | 390 | 1.76e-40 | 160 |
Msa0257300 | AT3G20150.1 | 35.127 | 316 | 167 | 8 | 446 | 739 | 136 | 435 | 3.85e-39 | 157 |
Msa0257300 | AT3G20150.2 | 35.127 | 316 | 167 | 8 | 446 | 739 | 136 | 435 | 4.26e-39 | 156 |
Msa0257300 | AT5G27950.2 | 36.475 | 244 | 147 | 3 | 499 | 741 | 3 | 239 | 1.44e-38 | 150 |
Msa0257300 | AT1G01950.3 | 30.541 | 370 | 210 | 10 | 396 | 741 | 57 | 403 | 1.72e-38 | 154 |
Msa0257300 | AT1G01950.2 | 30.541 | 370 | 210 | 10 | 396 | 741 | 57 | 403 | 1.77e-38 | 154 |
Msa0257300 | AT1G01950.1 | 30.541 | 370 | 210 | 10 | 396 | 741 | 57 | 403 | 1.90e-38 | 154 |
Msa0257300 | AT1G12430.1 | 31.790 | 324 | 179 | 8 | 440 | 741 | 110 | 413 | 2.04e-38 | 154 |
Msa0257300 | AT1G12430.2 | 31.790 | 324 | 179 | 8 | 440 | 741 | 110 | 413 | 2.20e-38 | 154 |
Msa0257300 | AT3G16060.1 | 32.958 | 355 | 198 | 9 | 400 | 743 | 170 | 495 | 3.54e-38 | 152 |
Msa0257300 | AT4G38950.3 | 31.339 | 351 | 190 | 8 | 400 | 734 | 14 | 329 | 1.79e-37 | 150 |
Msa0257300 | AT4G38950.5 | 31.339 | 351 | 190 | 8 | 400 | 734 | 14 | 329 | 1.79e-37 | 150 |
Msa0257300 | AT4G38950.4 | 31.339 | 351 | 190 | 8 | 400 | 734 | 14 | 329 | 1.79e-37 | 150 |
Msa0257300 | AT4G38950.1 | 31.339 | 351 | 190 | 8 | 400 | 734 | 14 | 329 | 1.79e-37 | 150 |
Msa0257300 | AT4G38950.2 | 31.339 | 351 | 190 | 8 | 400 | 734 | 14 | 329 | 1.79e-37 | 150 |
Msa0257300 | AT3G43210.3 | 36.610 | 295 | 155 | 7 | 446 | 734 | 74 | 342 | 2.04e-37 | 151 |
Msa0257300 | AT3G43210.5 | 36.610 | 295 | 155 | 7 | 446 | 734 | 74 | 342 | 2.04e-37 | 151 |
Msa0257300 | AT3G43210.2 | 36.610 | 295 | 155 | 7 | 446 | 734 | 74 | 342 | 2.04e-37 | 151 |
Msa0257300 | AT3G43210.4 | 36.610 | 295 | 155 | 7 | 446 | 734 | 74 | 342 | 2.04e-37 | 151 |
Msa0257300 | AT3G43210.1 | 36.610 | 295 | 155 | 7 | 446 | 734 | 74 | 342 | 2.04e-37 | 151 |
Msa0257300 | AT4G24170.1 | 34.653 | 303 | 160 | 7 | 443 | 735 | 47 | 321 | 4.15e-37 | 150 |
Msa0257300 | AT4G24170.2 | 34.653 | 303 | 160 | 7 | 443 | 735 | 47 | 321 | 4.15e-37 | 150 |
Msa0257300 | AT5G02370.1 | 30.946 | 349 | 198 | 11 | 399 | 736 | 20 | 336 | 7.18e-36 | 144 |
Msa0257300 | AT2G21300.2 | 31.551 | 374 | 200 | 12 | 380 | 734 | 4 | 340 | 1.09e-35 | 145 |
Msa0257300 | AT2G21300.4 | 31.551 | 374 | 200 | 12 | 380 | 734 | 4 | 340 | 1.09e-35 | 145 |
Msa0257300 | AT2G21300.3 | 31.551 | 374 | 200 | 12 | 380 | 734 | 4 | 340 | 1.09e-35 | 145 |
Msa0257300 | AT2G21300.1 | 31.551 | 374 | 200 | 12 | 380 | 734 | 4 | 340 | 1.09e-35 | 145 |
Msa0257300 | AT2G21300.5 | 31.551 | 374 | 200 | 12 | 380 | 734 | 4 | 340 | 1.09e-35 | 145 |
Msa0257300 | AT1G59540.2 | 37.705 | 244 | 129 | 4 | 499 | 736 | 3 | 229 | 5.82e-35 | 142 |
Msa0257300 | AT3G16630.2 | 30.556 | 360 | 202 | 7 | 400 | 739 | 194 | 525 | 6.00e-35 | 143 |
Msa0257300 | AT3G16630.1 | 30.556 | 360 | 202 | 7 | 400 | 739 | 194 | 525 | 6.00e-35 | 143 |
Msa0257300 | AT1G01950.4 | 32.155 | 283 | 149 | 7 | 481 | 741 | 1 | 262 | 3.90e-30 | 127 |
Msa0257300 | AT4G14330.1 | 30.833 | 360 | 212 | 14 | 408 | 751 | 42 | 380 | 9.15e-30 | 127 |
Msa0257300 | AT5G42490.2 | 34.836 | 244 | 128 | 6 | 445 | 683 | 55 | 272 | 3.19e-25 | 112 |
Msa0257300 | AT5G42490.1 | 34.836 | 244 | 128 | 6 | 445 | 683 | 55 | 272 | 3.23e-25 | 112 |
Msa0257300 | AT5G65460.5 | 32.381 | 210 | 122 | 3 | 527 | 736 | 13 | 202 | 3.25e-22 | 103 |
Msa0257300 | AT3G51150.5 | 40.476 | 168 | 86 | 3 | 578 | 735 | 20 | 183 | 4.85e-22 | 102 |
Msa0257300 | AT5G23910.2 | 26.875 | 320 | 196 | 13 | 441 | 759 | 54 | 336 | 1.02e-16 | 85.1 |
Msa0257300 | AT5G23910.1 | 26.875 | 320 | 196 | 13 | 441 | 759 | 50 | 332 | 1.05e-16 | 85.1 |
Msa0257300 | AT1G20060.5 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.07e-13 | 75.5 |
Msa0257300 | AT1G20060.2 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.08e-13 | 75.5 |
Msa0257300 | AT1G20060.6 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.13e-13 | 75.5 |
Msa0257300 | AT1G20060.4 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.28e-13 | 75.5 |
Msa0257300 | AT1G20060.8 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.31e-13 | 75.5 |
Msa0257300 | AT1G20060.7 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.36e-13 | 75.1 |
Msa0257300 | AT1G20060.3 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.38e-13 | 75.1 |
Msa0257300 | AT1G20060.9 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.41e-13 | 75.1 |
Msa0257300 | AT1G20060.10 | 27.368 | 285 | 168 | 8 | 448 | 717 | 165 | 425 | 1.42e-13 | 75.1 |
Find 167 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAATTACATAATACAATTT+TGG | 0.174512 | 2_2:+53041105 | Msa0257300:CDS |
TGTAGAATTAAAGCTAATTT+TGG | 0.191152 | 2_2:-53044282 | None:intergenic |
ATTAAATCTGTCTTTCCTTT+TGG | 0.236411 | 2_2:-53039075 | None:intergenic |
TGCGTCTGATGGGGACTTAT+TGG | 0.245778 | 2_2:-53042231 | None:intergenic |
GGAAAATCTTACAATGTTAA+AGG | 0.252322 | 2_2:+53040396 | Msa0257300:CDS |
AAGTTTGCACTTGAGAAATT+TGG | 0.253930 | 2_2:-53040626 | None:intergenic |
AGCAATGCTGGTTCTGATTA+TGG | 0.268541 | 2_2:+53038999 | Msa0257300:CDS |
GAAAGCCTTCTTCCATTCAT+TGG | 0.287525 | 2_2:-53038924 | None:intergenic |
ATATGATTGATTATATAAAA+AGG | 0.298027 | 2_2:+53039523 | Msa0257300:CDS |
GAAGAGAACAGATTGGTATT+TGG | 0.301781 | 2_2:-53038517 | None:intergenic |
GCGTATGGTCAGACAGGTTC+AGG | 0.306386 | 2_2:+53041924 | Msa0257300:CDS |
GTATTCACTCTTCGAATATA+CGG | 0.320557 | 2_2:+53042645 | Msa0257300:CDS |
GGCTCAAGGTTTGCATTAGA+TGG | 0.325416 | 2_2:+53039544 | Msa0257300:CDS |
GACGCAACCCGTGCAGAAAA+TGG | 0.331591 | 2_2:+53042248 | Msa0257300:CDS |
AGAGTAAATGCTTGTGAAAT+CGG | 0.335605 | 2_2:+53044118 | Msa0257300:CDS |
TGGAATATGATCCTCCTTCT+TGG | 0.342601 | 2_2:-53043233 | None:intergenic |
CTAAATCTCATTGATCTTGC+TGG | 0.351017 | 2_2:+53042983 | Msa0257300:CDS |
CTTTCAAGGAGTGGCTCAAC+TGG | 0.355830 | 2_2:+53043016 | Msa0257300:CDS |
AAGTGCTCTTGATGGTTATA+AGG | 0.358591 | 2_2:+53041533 | Msa0257300:CDS |
CCTACCTCCATGGAAGCTTC+TGG | 0.358952 | 2_2:+53041304 | Msa0257300:CDS |
TATATTCATGATTTCATTTG+AGG | 0.362858 | 2_2:-53044204 | None:intergenic |
GGGCCAACTTGCTCTGTCTA+TGG | 0.370913 | 2_2:+53040417 | Msa0257300:CDS |
AATGGAAGAAGGCTTTCTTT+TGG | 0.377905 | 2_2:+53038930 | Msa0257300:CDS |
GCTGAATACAAACTTATAGA+AGG | 0.382753 | 2_2:+53041067 | Msa0257300:CDS |
AGAGAAGTTGAAGAGTTCAT+TGG | 0.385008 | 2_2:+53039602 | Msa0257300:CDS |
AGGAGGATCATATTCCATTC+AGG | 0.389504 | 2_2:+53043239 | Msa0257300:CDS |
GCTCCTGACCAAGCTTCATC+TGG | 0.400049 | 2_2:+53044064 | Msa0257300:CDS |
TTAGAACACCTTGTACTTGT+TGG | 0.402581 | 2_2:-53042964 | None:intergenic |
AAACTCAACAATCAAATTGA+TGG | 0.403638 | 2_2:+53044554 | Msa0257300:three_prime_UTR |
TCTGCACGGGTTGCGTCTGA+TGG | 0.408314 | 2_2:-53042242 | None:intergenic |
AAAGATTCTTCAGAAAAGTC+TGG | 0.416172 | 2_2:+53040672 | Msa0257300:CDS |
CTGGGAGTGAGCGTCTTTCA+AGG | 0.422087 | 2_2:+53043002 | Msa0257300:CDS |
AGTAGCTCAACTCAAGATCT+TGG | 0.422261 | 2_2:-53039569 | None:intergenic |
GCCTGGACATCCCGGAGAAA+AGG | 0.427463 | 2_2:+53041971 | Msa0257300:CDS |
TTTGCAAGATAGTCATATAA+AGG | 0.427962 | 2_2:+53040835 | Msa0257300:CDS |
CTGCACGGGTTGCGTCTGAT+GGG | 0.431307 | 2_2:-53042241 | None:intergenic |
ACTTCTTCTTGTAATGCATC+AGG | 0.431553 | 2_2:-53041483 | None:intergenic |
TGAAACGATTCGTGATTTGT+TGG | 0.432566 | 2_2:+53042202 | Msa0257300:CDS |
GGAAATGGTGGACATGATCT+TGG | 0.433425 | 2_2:+53038957 | Msa0257300:CDS |
TTCTGTAGGGCGACCGTTGG+TGG | 0.434138 | 2_2:-53044155 | None:intergenic |
CTTGTGCAAAGTGCTCTTGA+TGG | 0.436000 | 2_2:+53041525 | Msa0257300:CDS |
CTTGGAGGAGTCAATTTGCC+TGG | 0.437884 | 2_2:+53044238 | Msa0257300:three_prime_UTR |
GAAAATCTTACAATGTTAAA+GGG | 0.439570 | 2_2:+53040397 | Msa0257300:CDS |
AGGCCTGCCCATCATTGTAT+AGG | 0.442108 | 2_2:-53041952 | None:intergenic |
GTTTACTGATAATATAATGT+AGG | 0.442813 | 2_2:-53044442 | None:intergenic |
AGTCTCAGCAACCGCAAGGC+TGG | 0.443386 | 2_2:+53042036 | Msa0257300:CDS |
GAGTAAATGCTTGTGAAATC+GGG | 0.443537 | 2_2:+53044119 | Msa0257300:CDS |
CGTGCAGAAAATGGTACTCC+TGG | 0.448766 | 2_2:+53042257 | Msa0257300:CDS |
ACACTTGAGTTTCTTTCAAT+CGG | 0.448769 | 2_2:-53043042 | None:intergenic |
TTAACTAAATGCATAGTACT+TGG | 0.449526 | 2_2:-53044346 | None:intergenic |
GAATATATGTTTAACCTGCT+TGG | 0.450718 | 2_2:+53044220 | Msa0257300:three_prime_UTR |
TTGCTTGGTGGAGTACTACT+TGG | 0.454455 | 2_2:-53038981 | None:intergenic |
TGTACCTTTGAACAATTTGA+AGG | 0.461024 | 2_2:-53038717 | None:intergenic |
TCTGAGCTGCAACTTTCATC+AGG | 0.468102 | 2_2:-53041262 | None:intergenic |
TATACAATGATGGGCAGGCC+TGG | 0.471135 | 2_2:+53041954 | Msa0257300:CDS |
TTGATTGAGTATTGCTTCCC+AGG | 0.476119 | 2_2:-53042275 | None:intergenic |
CCTGGACATCCCGGAGAAAA+GGG | 0.477026 | 2_2:+53041972 | Msa0257300:CDS |
ATAATATAATGTAGGGTAAG+TGG | 0.480283 | 2_2:-53044434 | None:intergenic |
GAGAGAGAAACTAGTATTGT+GGG | 0.481781 | 2_2:-53038593 | None:intergenic |
GAGAGTCACTATGCTCGCTT+CGG | 0.484070 | 2_2:+53044086 | Msa0257300:CDS |
CTTGGTGCAACTCGCTTCGA+AGG | 0.484156 | 2_2:-53040584 | None:intergenic |
GTAAGCTTTGAGTTCCTGAA+TGG | 0.484898 | 2_2:-53043253 | None:intergenic |
TAAATCTCATTGATCTTGCT+GGG | 0.487547 | 2_2:+53042984 | Msa0257300:CDS |
TCTCCAGATGAAGCTTGGTC+AGG | 0.488432 | 2_2:-53044067 | None:intergenic |
GGCATTGAATTGACACAAAA+CGG | 0.488804 | 2_2:+53041331 | Msa0257300:CDS |
GAACAATTTGAAGGTGTTGA+AGG | 0.489886 | 2_2:-53038708 | None:intergenic |
AACACCTTCAAATTGTTCAA+AGG | 0.492760 | 2_2:+53038713 | Msa0257300:five_prime_UTR |
AAATTTACAGGTGTCAATGT+TGG | 0.492826 | 2_2:+53042169 | Msa0257300:intron |
TTTGAAACACAAGGCTGCAA+TGG | 0.493376 | 2_2:+53039933 | Msa0257300:intron |
TAAATCAAGCAGCAAGCAGC+AGG | 0.499431 | 2_2:+53042378 | Msa0257300:CDS |
GACCATTAAAACAAATGAGT+TGG | 0.499926 | 2_2:+53040713 | Msa0257300:CDS |
AGATGTTGAGAGTGTAAAAG+AGG | 0.503736 | 2_2:+53042343 | Msa0257300:CDS |
TTTACTGATAATATAATGTA+GGG | 0.505011 | 2_2:-53044441 | None:intergenic |
TTCTGTTCTTGTCTCAATTG+CGG | 0.508219 | 2_2:-53040993 | None:intergenic |
ATGGGCAGGCCTGGACATCC+CGG | 0.508285 | 2_2:+53041963 | Msa0257300:CDS |
TTTATTTCTATTTAGATCTG+TGG | 0.508771 | 2_2:+53042581 | Msa0257300:intron |
ATGGTGGGAACTCCAATGAA+TGG | 0.508792 | 2_2:+53038912 | Msa0257300:CDS |
GCCTCGTCCAGAAGCTTCCA+TGG | 0.508808 | 2_2:-53041311 | None:intergenic |
TTATTTCTATTTAGATCTGT+GGG | 0.508816 | 2_2:+53042582 | Msa0257300:intron |
AGGGAAAACCTATACAATGA+TGG | 0.512159 | 2_2:+53041944 | Msa0257300:CDS |
CGACCTTTCAAAGTCAAGCC+TGG | 0.512191 | 2_2:-53039980 | None:intergenic |
AGGCCAGGCTTGACTTTGAA+AGG | 0.521906 | 2_2:+53039977 | Msa0257300:CDS |
AAAGCTTACATACCTACTTC+AGG | 0.523943 | 2_2:+53043267 | Msa0257300:CDS |
AAACTAGTATTGTGGGGCCA+TGG | 0.523961 | 2_2:-53038586 | None:intergenic |
GGTCTCGATCATCCCTCACT+TGG | 0.525486 | 2_2:-53040602 | None:intergenic |
GAGAACAGATTGGTATTTGG+TGG | 0.525755 | 2_2:-53038514 | None:intergenic |
TTTGCACTTGAGAAATTTGG+CGG | 0.526878 | 2_2:-53040623 | None:intergenic |
AGTACTCCACCAAGCAATGC+TGG | 0.529000 | 2_2:+53038987 | Msa0257300:CDS |
GATGAAAGTTGCAGCTCAGA+AGG | 0.529522 | 2_2:+53041265 | Msa0257300:CDS |
GAGGAAGATGAGAATGTGAA+AGG | 0.529693 | 2_2:-53038454 | None:intergenic |
TCCATGGAAGCTTCTGGACG+AGG | 0.531073 | 2_2:+53041310 | Msa0257300:CDS |
TATATTTGCGTTGGCCAAGA+AGG | 0.531197 | 2_2:+53043219 | Msa0257300:CDS |
AGAGTTGCTGCTCAAAATCA+AGG | 0.538986 | 2_2:+53039749 | Msa0257300:intron |
CATTAAAACAAATGAGTTGG+AGG | 0.539871 | 2_2:+53040716 | Msa0257300:CDS |
TATGTTGAACAGCCTTGTCT+AGG | 0.540265 | 2_2:+53044007 | Msa0257300:intron |
TATATGTTTAACCTGCTTGG+AGG | 0.542193 | 2_2:+53044223 | Msa0257300:three_prime_UTR |
TGCACGGGTTGCGTCTGATG+GGG | 0.542811 | 2_2:-53042240 | None:intergenic |
TAATCAGAACCAGCATTGCT+TGG | 0.544910 | 2_2:-53038996 | None:intergenic |
AGTGAAGGAAGAAACAGAAA+AGG | 0.547012 | 2_2:+53039836 | Msa0257300:CDS |
GGTTATTGCAGTGGTCACAT+AGG | 0.551269 | 2_2:-53044261 | None:intergenic |
AAACCTATACAATGATGGGC+AGG | 0.553444 | 2_2:+53041949 | Msa0257300:CDS |
GCAAATTGACTCCTCCAAGC+AGG | 0.555568 | 2_2:-53044234 | None:intergenic |
CTGAATACAAACTTATAGAA+GGG | 0.557182 | 2_2:+53041068 | Msa0257300:CDS |
GTGACTCTCCAGATGAAGCT+TGG | 0.559821 | 2_2:-53044072 | None:intergenic |
GGGAAAACCTATACAATGAT+GGG | 0.560111 | 2_2:+53041945 | Msa0257300:CDS |
TAGGGCGACCGTTGGTGGTG+CGG | 0.560589 | 2_2:-53044150 | None:intergenic |
TTGCAGTGGTCACATAGGCC+AGG | 0.562204 | 2_2:-53044256 | None:intergenic |
TCAGAACCAGCATTGCTTGG+TGG | 0.562815 | 2_2:-53038993 | None:intergenic |
AAGTGATGTTATATTTGCGT+TGG | 0.563963 | 2_2:+53043210 | Msa0257300:CDS |
CGTATGGTCAGACAGGTTCA+GGG | 0.564873 | 2_2:+53041925 | Msa0257300:CDS |
GCTGCTCAAAATCAAGGAAG+AGG | 0.565783 | 2_2:+53039755 | Msa0257300:CDS |
ACAAGCTTGCAGCAGTACAA+TGG | 0.565794 | 2_2:+53040301 | Msa0257300:CDS |
AGGCTGGAAATATGAAATGC+AGG | 0.569183 | 2_2:+53042052 | Msa0257300:CDS |
TAGCTCAAGCGAGATTCTGT+AGG | 0.570127 | 2_2:-53044169 | None:intergenic |
ACACCTCGCCGCACCACCAA+CGG | 0.570228 | 2_2:+53044142 | Msa0257300:CDS |
GAAAGAGAAAGCGACCGTAG+TGG | 0.572500 | 2_2:+53040375 | Msa0257300:CDS |
TCGAATATACGGTGTAAATG+AGG | 0.572680 | 2_2:+53042656 | Msa0257300:CDS |
TCTGAGCTTTCTACAGTGGA+AGG | 0.572754 | 2_2:+53040334 | Msa0257300:CDS |
AATGGTCAAGTTGTTCACTT+CGG | 0.574399 | 2_2:-53040697 | None:intergenic |
ATCACTTGTTAAAGAAAGAG+AGG | 0.575304 | 2_2:+53039957 | Msa0257300:CDS |
GAAGCGAGTTGCACCAAGTG+AGG | 0.578583 | 2_2:+53040589 | Msa0257300:CDS |
ATAGCTTTGAAGACAATCCA+TGG | 0.580210 | 2_2:+53038569 | Msa0257300:five_prime_UTR |
TATATCTTATCCTACCTCCA+TGG | 0.581883 | 2_2:+53041294 | Msa0257300:CDS |
TTATAGAAGGGGAGAAGCTG+AGG | 0.582041 | 2_2:+53041080 | Msa0257300:CDS |
TTAGCTAGAAGAGAACAGAT+TGG | 0.585386 | 2_2:-53038524 | None:intergenic |
AGAGAGAGAAACTAGTATTG+TGG | 0.586075 | 2_2:-53038594 | None:intergenic |
AGCACGGACCAACAAGTACA+AGG | 0.586208 | 2_2:+53042956 | Msa0257300:CDS |
TTTGCAAGAGAAATTAGTGA+AGG | 0.588463 | 2_2:+53039821 | Msa0257300:CDS |
TGTTGAATGAGAAATCCAAA+AGG | 0.588663 | 2_2:+53039060 | Msa0257300:CDS |
GAAAGACAGATTTAATTACA+AGG | 0.589185 | 2_2:+53039082 | Msa0257300:CDS |
AGCTCAAGCGAGATTCTGTA+GGG | 0.592663 | 2_2:-53044168 | None:intergenic |
AGAAGAAGCTACAAAACAGA+AGG | 0.592725 | 2_2:+53040536 | Msa0257300:CDS |
GAACTCCAATGAATGGAAGA+AGG | 0.592936 | 2_2:+53038919 | Msa0257300:CDS |
CAATTATTACAGAAATGAGA+AGG | 0.593840 | 2_2:+53039787 | Msa0257300:CDS |
TTGTTAAAGAAAGAGAGGCC+AGG | 0.595581 | 2_2:+53039962 | Msa0257300:CDS |
CCAGAAGCTTCCATGGAGGT+AGG | 0.595913 | 2_2:-53041304 | None:intergenic |
ATTTCATATTTCCAGCCTTG+CGG | 0.599929 | 2_2:-53042047 | None:intergenic |
ATTTGCGTTGGCCAAGAAGG+AGG | 0.600719 | 2_2:+53043222 | Msa0257300:CDS |
GTTGAACAGCCTTGTCTAGG+TGG | 0.601251 | 2_2:+53044010 | Msa0257300:intron |
TGAATACAAACTTATAGAAG+GGG | 0.603590 | 2_2:+53041069 | Msa0257300:CDS |
AGATTCTGTAGGGCGACCGT+TGG | 0.611082 | 2_2:-53044158 | None:intergenic |
AGTGAGCGTCTTTCAAGGAG+TGG | 0.611359 | 2_2:+53043007 | Msa0257300:CDS |
GCTTGAAACTGCAAATCAGA+AGG | 0.611686 | 2_2:+53040044 | Msa0257300:CDS |
AAGCGAGTTGCACCAAGTGA+GGG | 0.611835 | 2_2:+53040590 | Msa0257300:CDS |
TGTTATCTTGTGATGTAGAG+AGG | 0.614378 | 2_2:+53044578 | Msa0257300:three_prime_UTR |
GTGCAGAAAATGGTACTCCT+GGG | 0.615884 | 2_2:+53042258 | Msa0257300:CDS |
CGACCGTTGGTGGTGCGGCG+AGG | 0.616134 | 2_2:-53044145 | None:intergenic |
TCATTCTGAGCTTTCTACAG+TGG | 0.617285 | 2_2:+53040330 | Msa0257300:CDS |
TTGGTGCAACTCGCTTCGAA+GGG | 0.619790 | 2_2:-53040583 | None:intergenic |
TTTCACAAGAGAAGATGTTG+AGG | 0.627354 | 2_2:+53039034 | Msa0257300:CDS |
TCAATCAAGCATGATGCCAG+TGG | 0.629434 | 2_2:+53042290 | Msa0257300:CDS |
CAACTTTCATCAGGTAACAA+AGG | 0.634970 | 2_2:-53041253 | None:intergenic |
AGAAACAAGAGTATTTCCAC+TGG | 0.637182 | 2_2:-53042306 | None:intergenic |
TACACTCTCAACATCTACCA+CGG | 0.637474 | 2_2:-53042336 | None:intergenic |
GAGACAAGAACAGAATTCGA+AGG | 0.641375 | 2_2:+53041001 | Msa0257300:CDS |
AGACAGTCTCAGCAACCGCA+AGG | 0.643705 | 2_2:+53042032 | Msa0257300:CDS |
ACTTCACTACAGAGTGAGTG+AGG | 0.643854 | 2_2:-53038631 | None:intergenic |
ACGACACTATCAGAAGATCT+CGG | 0.646133 | 2_2:+53040006 | Msa0257300:CDS |
TAACCATAGACAGAGCAAGT+TGG | 0.649121 | 2_2:-53040420 | None:intergenic |
TTCGTGTGTTCTGTAGAGTG+CGG | 0.655147 | 2_2:+53041230 | Msa0257300:CDS |
TCTTGTTTCTGATCTTACCG+TGG | 0.662250 | 2_2:+53042319 | Msa0257300:CDS |
TTTGAGTCTCCACCTAGACA+AGG | 0.670015 | 2_2:-53044019 | None:intergenic |
AATATTTGTTCAAGTGAACG+AGG | 0.680505 | 2_2:-53042002 | None:intergenic |
AGAGAGAAACTAGTATTGTG+GGG | 0.692086 | 2_2:-53038592 | None:intergenic |
GAAGGAAGAAACAGAAAAGG+CGG | 0.694656 | 2_2:+53039839 | Msa0257300:CDS |
GATTGCAGAGAACAAACTTG+AGG | 0.702874 | 2_2:+53040877 | Msa0257300:CDS |
TCGTCCAGAAGCTTCCATGG+AGG | 0.737803 | 2_2:-53041308 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAATATTATTATTATTTAA+AGG | - | chr2_2:53038386-53038405 | None:intergenic | 0.0% |
!!! | ATAATATTAATAACACTTTT+TGG | + | chr2_2:53038396-53038415 | Msa0257300:five_prime_UTR | 10.0% |
!! | ATATGATTGATTATATAAAA+AGG | + | chr2_2:53039523-53039542 | Msa0257300:CDS | 10.0% |
!!! | AATTTGTGATATAATTATTT+TGG | + | chr2_2:53040945-53040964 | Msa0257300:intron | 10.0% |
!! | AAAAAAAAAAAAACATCATA+TGG | - | chr2_2:53043074-53043093 | None:intergenic | 10.0% |
!!! | GTAAAAAAGTAATTTTTTTG+TGG | + | chr2_2:53038832-53038851 | Msa0257300:intron | 15.0% |
!!! | AGAATTACATAATACAATTT+TGG | + | chr2_2:53041105-53041124 | Msa0257300:CDS | 15.0% |
!!! | TTTTCTTCATAAAAATTTAC+AGG | + | chr2_2:53042157-53042176 | Msa0257300:intron | 15.0% |
!! | TTTACTGATAATATAATGTA+GGG | - | chr2_2:53044444-53044463 | None:intergenic | 15.0% |
!! | CAAAATGGAAAATAAATGAT+GGG | - | chr2_2:53038757-53038776 | None:intergenic | 20.0% |
!! | TCAAAATGGAAAATAAATGA+TGG | - | chr2_2:53038758-53038777 | None:intergenic | 20.0% |
!!! | TGCTTTTTAATTGTTTGTTT+TGG | + | chr2_2:53039393-53039412 | Msa0257300:intron | 20.0% |
!!! | ACATCATAATTTGTGTTTTT+AGG | + | chr2_2:53039488-53039507 | Msa0257300:intron | 20.0% |
!! | AAAACAAAAATGGAAAGAAA+TGG | - | chr2_2:53039675-53039694 | None:intergenic | 20.0% |
!!! | TTTCTTTCCATTTTTGTTTT+TGG | + | chr2_2:53039675-53039694 | Msa0257300:intron | 20.0% |
!!! | TTATTATCTTTTGAAACACA+AGG | + | chr2_2:53039924-53039943 | Msa0257300:intron | 20.0% |
!! | GAAAATCTTACAATGTTAAA+GGG | + | chr2_2:53040397-53040416 | Msa0257300:CDS | 20.0% |
!!! | GTTTATATCATGTTTTTTTC+CGG | + | chr2_2:53040742-53040761 | Msa0257300:intron | 20.0% |
!!! | TTTAGTTTTAGGTTATCTTT+GGG | + | chr2_2:53041663-53041682 | Msa0257300:intron | 20.0% |
!!! | ATTAAGTTGTTTATCCAAAT+AGG | + | chr2_2:53041807-53041826 | Msa0257300:intron | 20.0% |
!!! | TTAAGTTGTTTATCCAAATA+GGG | + | chr2_2:53041808-53041827 | Msa0257300:intron | 20.0% |
!! | TGATAAACATGCATATTATA+AGG | - | chr2_2:53041834-53041853 | None:intergenic | 20.0% |
!!! | GTTATTACTTTTTCCTTTAT+AGG | + | chr2_2:53042400-53042419 | Msa0257300:intron | 20.0% |
!!! | TTTATTTCTATTTAGATCTG+TGG | + | chr2_2:53042581-53042600 | Msa0257300:intron | 20.0% |
!!! | TTATTTCTATTTAGATCTGT+GGG | + | chr2_2:53042582-53042601 | Msa0257300:intron | 20.0% |
!!! | ATTATTTTCATAAGCTATCT+TGG | - | chr2_2:53042878-53042897 | None:intergenic | 20.0% |
!! | ATGAAATAGAAAACATCATA+TGG | - | chr2_2:53043110-53043129 | None:intergenic | 20.0% |
!! | TAATTTAATTCTTGAACTGT+CGG | - | chr2_2:53043570-53043589 | None:intergenic | 20.0% |
!!! | ACAGTTTAGTTTTTTTGTAA+AGG | + | chr2_2:53043797-53043816 | Msa0257300:intron | 20.0% |
!! | TATATTCATGATTTCATTTG+AGG | - | chr2_2:53044207-53044226 | None:intergenic | 20.0% |
!!! | TGTAGAATTAAAGCTAATTT+TGG | - | chr2_2:53044285-53044304 | None:intergenic | 20.0% |
!! | GTTTACTGATAATATAATGT+AGG | - | chr2_2:53044445-53044464 | None:intergenic | 20.0% |
!!! | CTCTGAAAATTTTCTAAAAG+AGG | - | chr2_2:53038476-53038495 | None:intergenic | 25.0% |
!!! | TTATTTTCCATTTTGAGAAG+TGG | + | chr2_2:53038762-53038781 | Msa0257300:intron | 25.0% |
!!! | TATTTTCCATTTTGAGAAGT+GGG | + | chr2_2:53038763-53038782 | Msa0257300:intron | 25.0% |
!! | TTAATGGATGTGAAATTTCA+AGG | + | chr2_2:53038809-53038828 | Msa0257300:intron | 25.0% |
!! | TAATGGATGTGAAATTTCAA+GGG | + | chr2_2:53038810-53038829 | Msa0257300:intron | 25.0% |
!!! | AATTTTTTTGTGGTTTTGCA+AGG | + | chr2_2:53038842-53038861 | Msa0257300:intron | 25.0% |
!! | ATTAAATCTGTCTTTCCTTT+TGG | - | chr2_2:53039078-53039097 | None:intergenic | 25.0% |
! | GAAAGACAGATTTAATTACA+AGG | + | chr2_2:53039082-53039101 | Msa0257300:CDS | 25.0% |
! | ACTGATACATATAATTACAC+TGG | + | chr2_2:53039234-53039253 | Msa0257300:intron | 25.0% |
!!! | AATTGTTTGTTTTGGTTGTT+TGG | + | chr2_2:53039401-53039420 | Msa0257300:intron | 25.0% |
!!! | ATTGTTTGTTTTGGTTGTTT+GGG | + | chr2_2:53039402-53039421 | Msa0257300:intron | 25.0% |
!!! | TTTGGGATTTTAGATCAAAT+GGG | + | chr2_2:53039419-53039438 | Msa0257300:intron | 25.0% |
! | TGATTATATAAAAAGGCTCA+AGG | + | chr2_2:53039530-53039549 | Msa0257300:CDS | 25.0% |
!! | TATTTCCACACATTTTTGTT+GGG | - | chr2_2:53039634-53039653 | None:intergenic | 25.0% |
!! | GGATTTTCCAAAAACAAAAA+TGG | - | chr2_2:53039685-53039704 | None:intergenic | 25.0% |
! | ATTACTACACAAACATAATG+CGG | - | chr2_2:53039706-53039725 | None:intergenic | 25.0% |
! | ATTATGTTTGTGTAGTAATG+TGG | + | chr2_2:53039707-53039726 | Msa0257300:intron | 25.0% |
! | CAATTATTACAGAAATGAGA+AGG | + | chr2_2:53039787-53039806 | Msa0257300:CDS | 25.0% |
!! | ATTTAGCATCAACCTTTTTA+TGG | - | chr2_2:53039895-53039914 | None:intergenic | 25.0% |
! | CTGGATATTTAATGGAAATT+AGG | - | chr2_2:53040152-53040171 | None:intergenic | 25.0% |
! | CTAATTTCCATTAAATATCC+AGG | + | chr2_2:53040150-53040169 | Msa0257300:intron | 25.0% |
! | GGAAAATCTTACAATGTTAA+AGG | + | chr2_2:53040396-53040415 | Msa0257300:CDS | 25.0% |
! | AAAAAGGATGTTGAATTTAC+CGG | - | chr2_2:53040764-53040783 | None:intergenic | 25.0% |
! | TGTCTACATAAATAGCAAAA+AGG | - | chr2_2:53040780-53040799 | None:intergenic | 25.0% |
! | TTTGCAAGATAGTCATATAA+AGG | + | chr2_2:53040835-53040854 | Msa0257300:CDS | 25.0% |
!!! | ATTATTTTGGTTCTTCATTC+AGG | + | chr2_2:53040958-53040977 | Msa0257300:intron | 25.0% |
! | CTGAATACAAACTTATAGAA+GGG | + | chr2_2:53041068-53041087 | Msa0257300:CDS | 25.0% |
! | TGAATACAAACTTATAGAAG+GGG | + | chr2_2:53041069-53041088 | Msa0257300:CDS | 25.0% |
! | ATGAAGATAAGTACTTAGTA+AGG | - | chr2_2:53041186-53041205 | None:intergenic | 25.0% |
!!! | ATACTTGTGTTGCTATTTTT+AGG | + | chr2_2:53041423-53041442 | Msa0257300:intron | 25.0% |
!! | CAAATGTGAAAGAATGTTTT+TGG | - | chr2_2:53041449-53041468 | None:intergenic | 25.0% |
!!! | AGTTAAAAGGCTTTAGTTTT+AGG | + | chr2_2:53041652-53041671 | Msa0257300:intron | 25.0% |
!!! | CTTTAGTTTTAGGTTATCTT+TGG | + | chr2_2:53041662-53041681 | Msa0257300:intron | 25.0% |
! | ATGGCTTCAATTATTAATAG+AGG | - | chr2_2:53042695-53042714 | None:intergenic | 25.0% |
!! | AATAAGTTGAAAACAGCTTA+TGG | - | chr2_2:53042843-53042862 | None:intergenic | 25.0% |
! | AACTTCTTTCACTTGTAATT+AGG | + | chr2_2:53043162-53043181 | Msa0257300:intron | 25.0% |
!!! | GAGATACTAATCATTTTTCA+AGG | - | chr2_2:53043345-53043364 | None:intergenic | 25.0% |
!!! | TTTTTCAGTGAAGTTTGTTT+CGG | - | chr2_2:53043534-53043553 | None:intergenic | 25.0% |
! | AACAATCTTATAGTTCAACT+TGG | + | chr2_2:53043670-53043689 | Msa0257300:intron | 25.0% |
! | GATGAAAAAAAACCAAAAAC+TGG | - | chr2_2:53043697-53043716 | None:intergenic | 25.0% |
! | CATTAGCAATTTGATACAAT+GGG | + | chr2_2:53043742-53043761 | Msa0257300:intron | 25.0% |
! | ATTAGCAATTTGATACAATG+GGG | + | chr2_2:53043743-53043762 | Msa0257300:intron | 25.0% |
! | TTAACTAAATGCATAGTACT+TGG | - | chr2_2:53044349-53044368 | None:intergenic | 25.0% |
! | ATAATATAATGTAGGGTAAG+TGG | - | chr2_2:53044437-53044456 | None:intergenic | 25.0% |
! | AAACTCAACAATCAAATTGA+TGG | + | chr2_2:53044554-53044573 | Msa0257300:three_prime_UTR | 25.0% |
!! | CACAGTTGGCAAATTTTAAT+TGG | - | chr2_2:53038318-53038337 | None:intergenic | 30.0% |
!!! | AGAATTTTTCAAGACACAGT+TGG | - | chr2_2:53038332-53038351 | None:intergenic | 30.0% |
!! | AAATTTTCAGAGTGTTTGTG+TGG | + | chr2_2:53038484-53038503 | Msa0257300:five_prime_UTR | 30.0% |
AACACCTTCAAATTGTTCAA+AGG | + | chr2_2:53038713-53038732 | Msa0257300:five_prime_UTR | 30.0% | |
TGTACCTTTGAACAATTTGA+AGG | - | chr2_2:53038720-53038739 | None:intergenic | 30.0% | |
! | TGGTTTTCGCATTTGTTTAA+TGG | + | chr2_2:53038793-53038812 | Msa0257300:intron | 30.0% |
CATAGAGTGAAGAAGAAAAA+TGG | + | chr2_2:53038893-53038912 | Msa0257300:exon | 30.0% | |
!!! | CTTTCTTTTGGTTTTGGAAA+TGG | + | chr2_2:53038942-53038961 | Msa0257300:CDS | 30.0% |
TGTTGAATGAGAAATCCAAA+AGG | + | chr2_2:53039060-53039079 | Msa0257300:CDS | 30.0% | |
GACAGATTTAATTACAAGGT+TGG | + | chr2_2:53039086-53039105 | Msa0257300:intron | 30.0% | |
TATCAAGTTATTAGCAGTGT+TGG | + | chr2_2:53039269-53039288 | Msa0257300:intron | 30.0% | |
GAGATTACAAGATCAAACTA+TGG | - | chr2_2:53039330-53039349 | None:intergenic | 30.0% | |
!! | GTTTGGGATTTTAGATCAAA+TGG | + | chr2_2:53039418-53039437 | Msa0257300:intron | 30.0% |
! | CTATTTCCACACATTTTTGT+TGG | - | chr2_2:53039635-53039654 | None:intergenic | 30.0% |
CAACAAAAATGTGTGGAAAT+AGG | + | chr2_2:53039633-53039652 | Msa0257300:CDS | 30.0% | |
TTTGCAAGAGAAATTAGTGA+AGG | + | chr2_2:53039821-53039840 | Msa0257300:CDS | 30.0% | |
TTGTGCAAAATGCCATAAAA+AGG | + | chr2_2:53039880-53039899 | Msa0257300:intron | 30.0% | |
! | ATCACTTGTTAAAGAAAGAG+AGG | + | chr2_2:53039957-53039976 | Msa0257300:CDS | 30.0% |
AAGCTATCCTGGATATTTAA+TGG | - | chr2_2:53040160-53040179 | None:intergenic | 30.0% | |
ACTGACATGACTATCAATAT+CGG | - | chr2_2:53040185-53040204 | None:intergenic | 30.0% | |
! | CATTGTAAGATTTTCCACTA+CGG | - | chr2_2:53040392-53040411 | None:intergenic | 30.0% |
AAGTTGCATACTAATGAGAA+AGG | - | chr2_2:53040471-53040490 | None:intergenic | 30.0% | |
TTTCTCATTAGTATGCAACT+TGG | + | chr2_2:53040470-53040489 | Msa0257300:intron | 30.0% | |
AAGTTTGCACTTGAGAAATT+TGG | - | chr2_2:53040629-53040648 | None:intergenic | 30.0% | |
AAAGATTCTTCAGAAAAGTC+TGG | + | chr2_2:53040672-53040691 | Msa0257300:CDS | 30.0% | |
GACCATTAAAACAAATGAGT+TGG | + | chr2_2:53040713-53040732 | Msa0257300:CDS | 30.0% | |
!!! | CTCCAACTCATTTGTTTTAA+TGG | - | chr2_2:53040718-53040737 | None:intergenic | 30.0% |
! | CATTAAAACAAATGAGTTGG+AGG | + | chr2_2:53040716-53040735 | Msa0257300:CDS | 30.0% |
GCTGAATACAAACTTATAGA+AGG | + | chr2_2:53041067-53041086 | Msa0257300:CDS | 30.0% | |
TATCAACAAATTTCGTCTCA+GGG | - | chr2_2:53041136-53041155 | None:intergenic | 30.0% | |
TTATCAACAAATTTCGTCTC+AGG | - | chr2_2:53041137-53041156 | None:intergenic | 30.0% | |
!! | GTACTTATCTTCATTTTGAC+AGG | + | chr2_2:53041192-53041211 | Msa0257300:intron | 30.0% |
TAGTCGGTAATAGAGTTAAA+AGG | + | chr2_2:53041639-53041658 | Msa0257300:intron | 30.0% | |
TCTCAAATTTCAAGAATCCT+TGG | - | chr2_2:53041877-53041896 | None:intergenic | 30.0% | |
!! | TTTGAGACATTTTCTTTTCC+AGG | + | chr2_2:53041890-53041909 | Msa0257300:intron | 30.0% |
AATATTTGTTCAAGTGAACG+AGG | - | chr2_2:53042005-53042024 | None:intergenic | 30.0% | |
AATGTAACCGTTGTAATGAT+GGG | - | chr2_2:53042109-53042128 | None:intergenic | 30.0% | |
TAATGTAACCGTTGTAATGA+TGG | - | chr2_2:53042110-53042129 | None:intergenic | 30.0% | |
AAATTTACAGGTGTCAATGT+TGG | + | chr2_2:53042169-53042188 | Msa0257300:intron | 30.0% | |
! | AAGCTAACATACTTTGCTTT+TGG | + | chr2_2:53042530-53042549 | Msa0257300:intron | 30.0% |
!! | TAACATACTTTGCTTTTGGA+TGG | + | chr2_2:53042534-53042553 | Msa0257300:intron | 30.0% |
GTATTCACTCTTCGAATATA+CGG | + | chr2_2:53042645-53042664 | Msa0257300:CDS | 30.0% | |
TAAATCTCATTGATCTTGCT+GGG | + | chr2_2:53042984-53043003 | Msa0257300:CDS | 30.0% | |
ACACTTGAGTTTCTTTCAAT+CGG | - | chr2_2:53043045-53043064 | None:intergenic | 30.0% | |
AAGTGATGTTATATTTGCGT+TGG | + | chr2_2:53043210-53043229 | Msa0257300:CDS | 30.0% | |
AAAGAAAAATCACCTGAAGT+AGG | - | chr2_2:53043282-53043301 | None:intergenic | 30.0% | |
TAAGTGTAGTAAACTGCAAT+AGG | + | chr2_2:53043465-53043484 | Msa0257300:intron | 30.0% | |
GCTGTTATTAACTGATTGTT+AGG | - | chr2_2:53043723-53043742 | None:intergenic | 30.0% | |
GCATTAGCAATTTGATACAA+TGG | + | chr2_2:53043741-53043760 | Msa0257300:intron | 30.0% | |
TTGTAAAGGTAGTTTCGATT+TGG | + | chr2_2:53043811-53043830 | Msa0257300:intron | 30.0% | |
TATTAAAAACACCAACAGCT+AGG | - | chr2_2:53043958-53043977 | None:intergenic | 30.0% | |
AGAGTAAATGCTTGTGAAAT+CGG | + | chr2_2:53044118-53044137 | Msa0257300:CDS | 30.0% | |
GAATATATGTTTAACCTGCT+TGG | + | chr2_2:53044220-53044239 | Msa0257300:three_prime_UTR | 30.0% | |
GCACTATTTGCCACAATTTA+AGG | + | chr2_2:53038253-53038272 | Msa0257300:intron | 35.0% | |
CTATTTGCCACAATTTAAGG+AGG | + | chr2_2:53038256-53038275 | Msa0257300:intron | 35.0% | |
GAAGAGAACAGATTGGTATT+TGG | - | chr2_2:53038520-53038539 | None:intergenic | 35.0% | |
TTAGCTAGAAGAGAACAGAT+TGG | - | chr2_2:53038527-53038546 | None:intergenic | 35.0% | |
!! | ATAGCTTTGAAGACAATCCA+TGG | + | chr2_2:53038569-53038588 | Msa0257300:five_prime_UTR | 35.0% |
AGAGAGAAACTAGTATTGTG+GGG | - | chr2_2:53038595-53038614 | None:intergenic | 35.0% | |
GAGAGAGAAACTAGTATTGT+GGG | - | chr2_2:53038596-53038615 | None:intergenic | 35.0% | |
AGAGAGAGAAACTAGTATTG+TGG | - | chr2_2:53038597-53038616 | None:intergenic | 35.0% | |
!! | GAACAATTTGAAGGTGTTGA+AGG | - | chr2_2:53038711-53038730 | None:intergenic | 35.0% |
AAACAACCCACTTCTCAAAA+TGG | - | chr2_2:53038772-53038791 | None:intergenic | 35.0% | |
!! | TTTGAGAAGTGGGTTGTTTA+TGG | + | chr2_2:53038773-53038792 | Msa0257300:intron | 35.0% |
AGAGTGAAGAAGAAAAATGG+TGG | + | chr2_2:53038896-53038915 | Msa0257300:exon | 35.0% | |
GAGTGAAGAAGAAAAATGGT+GGG | + | chr2_2:53038897-53038916 | Msa0257300:exon | 35.0% | |
! | AATGGAAGAAGGCTTTCTTT+TGG | + | chr2_2:53038930-53038949 | Msa0257300:CDS | 35.0% |
!!! | AGAAGGCTTTCTTTTGGTTT+TGG | + | chr2_2:53038936-53038955 | Msa0257300:CDS | 35.0% |
!!! | TCTTTTGGTTTTGGAAATGG+TGG | + | chr2_2:53038945-53038964 | Msa0257300:CDS | 35.0% |
TTTCACAAGAGAAGATGTTG+AGG | + | chr2_2:53039034-53039053 | Msa0257300:CDS | 35.0% | |
CTAACACCTCAAACAACTAA+AGG | - | chr2_2:53039127-53039146 | None:intergenic | 35.0% | |
! | CTTTAGTTGTTTGAGGTGTT+AGG | + | chr2_2:53039125-53039144 | Msa0257300:intron | 35.0% |
TATATGTATCAGTGTCGTGT+CGG | - | chr2_2:53039227-53039246 | None:intergenic | 35.0% | |
! | ACAGATTTTAAATCCCCTCA+AGG | + | chr2_2:53039354-53039373 | Msa0257300:intron | 35.0% |
! | ATTTTAAATCCCCTCAAGGA+CGG | + | chr2_2:53039358-53039377 | Msa0257300:intron | 35.0% |
AGAGAAGTTGAAGAGTTCAT+TGG | + | chr2_2:53039602-53039621 | Msa0257300:CDS | 35.0% | |
ATTGTCCCAACAAAAATGTG+TGG | + | chr2_2:53039626-53039645 | Msa0257300:CDS | 35.0% | |
AGTGAAGGAAGAAACAGAAA+AGG | + | chr2_2:53039836-53039855 | Msa0257300:CDS | 35.0% | |
GAAGTCTTACAGAGTTTCAT+TGG | + | chr2_2:53040492-53040511 | Msa0257300:intron | 35.0% | |
!! | TTTCATTGGTTGTTTTCCTC+AGG | + | chr2_2:53040506-53040525 | Msa0257300:intron | 35.0% |
AGAAGAAGCTACAAAACAGA+AGG | + | chr2_2:53040536-53040555 | Msa0257300:CDS | 35.0% | |
TTTGCACTTGAGAAATTTGG+CGG | - | chr2_2:53040626-53040645 | None:intergenic | 35.0% | |
! | AATGGTCAAGTTGTTCACTT+CGG | - | chr2_2:53040700-53040719 | None:intergenic | 35.0% |
! | AAAACAAATGAGTTGGAGGT+TGG | + | chr2_2:53040720-53040739 | Msa0257300:intron | 35.0% |
TTCTGTTCTTGTCTCAATTG+CGG | - | chr2_2:53040996-53041015 | None:intergenic | 35.0% | |
!! | TCATTTTGACAGGAACTGAA+AGG | + | chr2_2:53041202-53041221 | Msa0257300:intron | 35.0% |
!! | CATTTTGACAGGAACTGAAA+GGG | + | chr2_2:53041203-53041222 | Msa0257300:intron | 35.0% |
CAACTTTCATCAGGTAACAA+AGG | - | chr2_2:53041256-53041275 | None:intergenic | 35.0% | |
TATATCTTATCCTACCTCCA+TGG | + | chr2_2:53041294-53041313 | Msa0257300:CDS | 35.0% | |
! | GGCATTGAATTGACACAAAA+CGG | + | chr2_2:53041331-53041350 | Msa0257300:CDS | 35.0% |
ACTTCTTCTTGTAATGCATC+AGG | - | chr2_2:53041486-53041505 | None:intergenic | 35.0% | |
! | AAGTGCTCTTGATGGTTATA+AGG | + | chr2_2:53041533-53041552 | Msa0257300:CDS | 35.0% |
AATGCACATGAAAGACTGTT+TGG | + | chr2_2:53041722-53041741 | Msa0257300:intron | 35.0% | |
ATGCACATGAAAGACTGTTT+GGG | + | chr2_2:53041723-53041742 | Msa0257300:intron | 35.0% | |
GCATATTATAAGGCCCTATT+TGG | - | chr2_2:53041824-53041843 | None:intergenic | 35.0% | |
TGTATGAATGTTTAGCACCA+AGG | + | chr2_2:53041857-53041876 | Msa0257300:intron | 35.0% | |
AGGGAAAACCTATACAATGA+TGG | + | chr2_2:53041944-53041963 | Msa0257300:CDS | 35.0% | |
GGGAAAACCTATACAATGAT+GGG | + | chr2_2:53041945-53041964 | Msa0257300:CDS | 35.0% | |
ATTTCATATTTCCAGCCTTG+CGG | - | chr2_2:53042050-53042069 | None:intergenic | 35.0% | |
! | TGAAACGATTCGTGATTTGT+TGG | + | chr2_2:53042202-53042221 | Msa0257300:CDS | 35.0% |
!! | AGAAACAAGAGTATTTCCAC+TGG | - | chr2_2:53042309-53042328 | None:intergenic | 35.0% |
! | AGATGTTGAGAGTGTAAAAG+AGG | + | chr2_2:53042343-53042362 | Msa0257300:CDS | 35.0% |
ACACATTGAGAAGCCTATAA+AGG | - | chr2_2:53042416-53042435 | None:intergenic | 35.0% | |
!! | AGCAAAGTATGTTAGCTTGT+AGG | - | chr2_2:53042528-53042547 | None:intergenic | 35.0% |
TCGAATATACGGTGTAAATG+AGG | + | chr2_2:53042656-53042675 | Msa0257300:CDS | 35.0% | |
CATGTTTCTTGTTCATGACT+CGG | + | chr2_2:53042712-53042731 | Msa0257300:intron | 35.0% | |
TCTGCTTGCTTAATTACTTG+TGG | + | chr2_2:53042777-53042796 | Msa0257300:intron | 35.0% | |
CTGCTTGCTTAATTACTTGT+GGG | + | chr2_2:53042778-53042797 | Msa0257300:intron | 35.0% | |
TTGCTTAATTACTTGTGGGA+CGG | + | chr2_2:53042782-53042801 | Msa0257300:intron | 35.0% | |
TTAGAACACCTTGTACTTGT+TGG | - | chr2_2:53042967-53042986 | None:intergenic | 35.0% | |
CTAAATCTCATTGATCTTGC+TGG | + | chr2_2:53042983-53043002 | Msa0257300:CDS | 35.0% | |
AAAGCTTACATACCTACTTC+AGG | + | chr2_2:53043267-53043286 | Msa0257300:CDS | 35.0% | |
!! | TAACGCTTTGGTTTGGATTT+GGG | - | chr2_2:53043509-53043528 | None:intergenic | 35.0% |
!! | TTAACGCTTTGGTTTGGATT+TGG | - | chr2_2:53043510-53043529 | None:intergenic | 35.0% |
TTTGTTTCGGTTTAACGCTT+TGG | - | chr2_2:53043521-53043540 | None:intergenic | 35.0% | |
CTATTTGTCACATTACAGTG+CGG | + | chr2_2:53043618-53043637 | Msa0257300:intron | 35.0% | |
ACCTTTATACCAACTTGGTT+TGG | + | chr2_2:53043856-53043875 | Msa0257300:intron | 35.0% | |
CCTTTATACCAACTTGGTTT+GGG | + | chr2_2:53043857-53043876 | Msa0257300:intron | 35.0% | |
GAGTAAATGCTTGTGAAATC+GGG | + | chr2_2:53044119-53044138 | Msa0257300:CDS | 35.0% | |
TATATGTTTAACCTGCTTGG+AGG | + | chr2_2:53044223-53044242 | Msa0257300:three_prime_UTR | 35.0% | |
!!! | GCTAATTTTGGTTATTGCAG+TGG | - | chr2_2:53044273-53044292 | None:intergenic | 35.0% |
TGTTATCTTGTGATGTAGAG+AGG | + | chr2_2:53044578-53044597 | Msa0257300:three_prime_UTR | 35.0% | |
GGCAAATAGTGCATTGTGAT+TGG | - | chr2_2:53038245-53038264 | None:intergenic | 40.0% | |
TGTGGCTGAAAAATAGGAAG+TGG | + | chr2_2:53038279-53038298 | Msa0257300:intron | 40.0% | |
GAGGAAGATGAGAATGTGAA+AGG | - | chr2_2:53038457-53038476 | None:intergenic | 40.0% | |
GAGAACAGATTGGTATTTGG+TGG | - | chr2_2:53038517-53038536 | None:intergenic | 40.0% | |
! | GTTTTGCAAGGTTGTGTTGT+TGG | + | chr2_2:53038854-53038873 | Msa0257300:intron | 40.0% |
GAACTCCAATGAATGGAAGA+AGG | + | chr2_2:53038919-53038938 | Msa0257300:CDS | 40.0% | |
GAAAGCCTTCTTCCATTCAT+TGG | - | chr2_2:53038927-53038946 | None:intergenic | 40.0% | |
TAATCAGAACCAGCATTGCT+TGG | - | chr2_2:53038999-53039018 | None:intergenic | 40.0% | |
!! | AGCAATGCTGGTTCTGATTA+TGG | + | chr2_2:53038999-53039018 | Msa0257300:CDS | 40.0% |
GTTGTGCCTTTAGTTGTTTG+AGG | + | chr2_2:53039118-53039137 | Msa0257300:intron | 40.0% | |
! | AGTTGTTTGAGGTGTTAGGT+CGG | + | chr2_2:53039129-53039148 | Msa0257300:intron | 40.0% |
AATCATACAACCGTCCTTGA+GGG | - | chr2_2:53039371-53039390 | None:intergenic | 40.0% | |
AAATCATACAACCGTCCTTG+AGG | - | chr2_2:53039372-53039391 | None:intergenic | 40.0% | |
AGTAGCTCAACTCAAGATCT+TGG | - | chr2_2:53039572-53039591 | None:intergenic | 40.0% | |
AGAGTTGCTGCTCAAAATCA+AGG | + | chr2_2:53039749-53039768 | Msa0257300:intron | 40.0% | |
GAAGGAAGAAACAGAAAAGG+CGG | + | chr2_2:53039839-53039858 | Msa0257300:CDS | 40.0% | |
! | TTTGAAACACAAGGCTGCAA+TGG | + | chr2_2:53039933-53039952 | Msa0257300:intron | 40.0% |
TTGTTAAAGAAAGAGAGGCC+AGG | + | chr2_2:53039962-53039981 | Msa0257300:CDS | 40.0% | |
ACGACACTATCAGAAGATCT+CGG | + | chr2_2:53040006-53040025 | Msa0257300:CDS | 40.0% | |
GCTTGAAACTGCAAATCAGA+AGG | + | chr2_2:53040044-53040063 | Msa0257300:CDS | 40.0% | |
CAATATCGGATAAGCTATCC+TGG | - | chr2_2:53040171-53040190 | None:intergenic | 40.0% | |
! | TTGATAGTCATGTCAGTGTC+AGG | + | chr2_2:53040188-53040207 | Msa0257300:intron | 40.0% |
TCATTCTGAGCTTTCTACAG+TGG | + | chr2_2:53040330-53040349 | Msa0257300:CDS | 40.0% | |
TAACCATAGACAGAGCAAGT+TGG | - | chr2_2:53040423-53040442 | None:intergenic | 40.0% | |
GATTGCAGAGAACAAACTTG+AGG | + | chr2_2:53040877-53040896 | Msa0257300:CDS | 40.0% | |
AACTTGAGGTGATGACAATG+TGG | + | chr2_2:53040891-53040910 | Msa0257300:intron | 40.0% | |
GAGACAAGAACAGAATTCGA+AGG | + | chr2_2:53041001-53041020 | Msa0257300:CDS | 40.0% | |
AACGGTATATCTCATGATGC+TGG | + | chr2_2:53041349-53041368 | Msa0257300:intron | 40.0% | |
GCCATTGTTCAATTGCTAGT+CGG | + | chr2_2:53041623-53041642 | Msa0257300:intron | 40.0% | |
ACCGACTAGCAATTGAACAA+TGG | - | chr2_2:53041627-53041646 | None:intergenic | 40.0% | |
!! | AAACCTATACAATGATGGGC+AGG | + | chr2_2:53041949-53041968 | Msa0257300:CDS | 40.0% |
! | AGGTATCAAACCCTTTTCTC+CGG | - | chr2_2:53041985-53042004 | None:intergenic | 40.0% |
AGGCTGGAAATATGAAATGC+AGG | + | chr2_2:53042052-53042071 | Msa0257300:CDS | 40.0% | |
! | TTGATTGAGTATTGCTTCCC+AGG | - | chr2_2:53042278-53042297 | None:intergenic | 40.0% |
!! | TCTTGTTTCTGATCTTACCG+TGG | + | chr2_2:53042319-53042338 | Msa0257300:CDS | 40.0% |
TACACTCTCAACATCTACCA+CGG | - | chr2_2:53042339-53042358 | None:intergenic | 40.0% | |
CGAGTCATGAACAAGAAACA+TGG | - | chr2_2:53042714-53042733 | None:intergenic | 40.0% | |
TTGCTATCCTAGAGCTTGTA+TGG | + | chr2_2:53042735-53042754 | Msa0257300:intron | 40.0% | |
AGTCAATCCATACAAGCTCT+AGG | - | chr2_2:53042745-53042764 | None:intergenic | 40.0% | |
TTAATTACTTGTGGGACGGT+TGG | + | chr2_2:53042786-53042805 | Msa0257300:intron | 40.0% | |
AAGCTATCTTGGAGAGCTTA+TGG | - | chr2_2:53042867-53042886 | None:intergenic | 40.0% | |
! | TATATTTGCGTTGGCCAAGA+AGG | + | chr2_2:53043219-53043238 | Msa0257300:CDS | 40.0% |
TGGAATATGATCCTCCTTCT+TGG | - | chr2_2:53043236-53043255 | None:intergenic | 40.0% | |
AGGAGGATCATATTCCATTC+AGG | + | chr2_2:53043239-53043258 | Msa0257300:CDS | 40.0% | |
!! | GTAAGCTTTGAGTTCCTGAA+TGG | - | chr2_2:53043256-53043275 | None:intergenic | 40.0% |
TTCGGTTTAACGCTTTGGTT+TGG | - | chr2_2:53043516-53043535 | None:intergenic | 40.0% | |
CAAACAGAACTGAATCGAAC+TGG | - | chr2_2:53043594-53043613 | None:intergenic | 40.0% | |
! | GTTCAACTTGGTCCAGTTTT+TGG | + | chr2_2:53043682-53043701 | Msa0257300:intron | 40.0% |
CAATGGGGTTCACAAAGAAT+CGG | + | chr2_2:53043758-53043777 | Msa0257300:intron | 40.0% | |
!! | TCGATTTGGAATCACTGAAC+CGG | + | chr2_2:53043825-53043844 | Msa0257300:intron | 40.0% |
ACCAGACCTTTATACCAACT+TGG | + | chr2_2:53043851-53043870 | Msa0257300:intron | 40.0% | |
!! | ACCAAGTTGGTATAAAGGTC+TGG | - | chr2_2:53043855-53043874 | None:intergenic | 40.0% |
!! | CCCAAACCAAGTTGGTATAA+AGG | - | chr2_2:53043860-53043879 | None:intergenic | 40.0% |
! | TATGTTGAACAGCCTTGTCT+AGG | + | chr2_2:53044007-53044026 | Msa0257300:intron | 40.0% |
TGCCACAATTTAAGGAGGTG+TGG | + | chr2_2:53038261-53038280 | Msa0257300:intron | 45.0% | |
AGCCACACCTCCTTAAATTG+TGG | - | chr2_2:53038266-53038285 | None:intergenic | 45.0% | |
! | AGGAGGTGTGGCTGAAAAAT+AGG | + | chr2_2:53038273-53038292 | Msa0257300:intron | 45.0% |
AAACTAGTATTGTGGGGCCA+TGG | - | chr2_2:53038589-53038608 | None:intergenic | 45.0% | |
ACTTCACTACAGAGTGAGTG+AGG | - | chr2_2:53038634-53038653 | None:intergenic | 45.0% | |
! | ATGGTGGGAACTCCAATGAA+TGG | + | chr2_2:53038912-53038931 | Msa0257300:CDS | 45.0% |
!! | GGAAATGGTGGACATGATCT+TGG | + | chr2_2:53038957-53038976 | Msa0257300:CDS | 45.0% |
! | TTGCTTGGTGGAGTACTACT+TGG | - | chr2_2:53038984-53039003 | None:intergenic | 45.0% |
TATGAAGCACAGACACTCCT+CGG | + | chr2_2:53039160-53039179 | Msa0257300:intron | 45.0% | |
ACATGACACATATCCGACAC+CGG | - | chr2_2:53039198-53039217 | None:intergenic | 45.0% | |
ATCATACAACCGTCCTTGAG+GGG | - | chr2_2:53039370-53039389 | None:intergenic | 45.0% | |
GGCTCAAGGTTTGCATTAGA+TGG | + | chr2_2:53039544-53039563 | Msa0257300:CDS | 45.0% | |
GCTGCTCAAAATCAAGGAAG+AGG | + | chr2_2:53039755-53039774 | Msa0257300:CDS | 45.0% | |
ACAAGCTTGCAGCAGTACAA+TGG | + | chr2_2:53040301-53040320 | Msa0257300:CDS | 45.0% | |
TCTGAGCTTTCTACAGTGGA+AGG | + | chr2_2:53040334-53040353 | Msa0257300:CDS | 45.0% | |
TTATAGAAGGGGAGAAGCTG+AGG | + | chr2_2:53041080-53041099 | Msa0257300:CDS | 45.0% | |
TTCGTGTGTTCTGTAGAGTG+CGG | + | chr2_2:53041230-53041249 | Msa0257300:CDS | 45.0% | |
TCTGAGCTGCAACTTTCATC+AGG | - | chr2_2:53041265-53041284 | None:intergenic | 45.0% | |
GATGAAAGTTGCAGCTCAGA+AGG | + | chr2_2:53041265-53041284 | Msa0257300:CDS | 45.0% | |
! | CTTGTGCAAAGTGCTCTTGA+TGG | + | chr2_2:53041525-53041544 | Msa0257300:CDS | 45.0% |
CATACGCGAAAATGCAAACC+TGG | - | chr2_2:53041911-53041930 | None:intergenic | 45.0% | |
! | CAGGTTTGCATTTTCGCGTA+TGG | + | chr2_2:53041909-53041928 | Msa0257300:intron | 45.0% |
! | ATTTTCGCGTATGGTCAGAC+AGG | + | chr2_2:53041918-53041937 | Msa0257300:CDS | 45.0% |
! | GGTATCAAACCCTTTTCTCC+GGG | - | chr2_2:53041984-53042003 | None:intergenic | 45.0% |
! | CGTTGTAATGATGGGACTGA+GGG | - | chr2_2:53042101-53042120 | None:intergenic | 45.0% |
CCTCAGTCCCATCATTACAA+CGG | + | chr2_2:53042099-53042118 | Msa0257300:intron | 45.0% | |
!!! | AGGAGTACCATTTTCTGCAC+GGG | - | chr2_2:53042258-53042277 | None:intergenic | 45.0% |
!!! | CAGGAGTACCATTTTCTGCA+CGG | - | chr2_2:53042259-53042278 | None:intergenic | 45.0% |
GTGCAGAAAATGGTACTCCT+GGG | + | chr2_2:53042258-53042277 | Msa0257300:CDS | 45.0% | |
TCAATCAAGCATGATGCCAG+TGG | + | chr2_2:53042290-53042309 | Msa0257300:CDS | 45.0% | |
TAAATCAAGCAGCAAGCAGC+AGG | + | chr2_2:53042378-53042397 | Msa0257300:CDS | 45.0% | |
CTCTTTGTTCTGCTAGAGCA+CGG | + | chr2_2:53042940-53042959 | Msa0257300:intron | 45.0% | |
AGCTAGGACTGTTCATGCTT+CGG | - | chr2_2:53043942-53043961 | None:intergenic | 45.0% | |
TTTGAGTCTCCACCTAGACA+AGG | - | chr2_2:53044022-53044041 | None:intergenic | 45.0% | |
AGCTCAAGCGAGATTCTGTA+GGG | - | chr2_2:53044171-53044190 | None:intergenic | 45.0% | |
TAGCTCAAGCGAGATTCTGT+AGG | - | chr2_2:53044172-53044191 | None:intergenic | 45.0% | |
GGTTATTGCAGTGGTCACAT+AGG | - | chr2_2:53044264-53044283 | None:intergenic | 45.0% | |
AGTACTCCACCAAGCAATGC+TGG | + | chr2_2:53038987-53039006 | Msa0257300:CDS | 50.0% | |
TCAGAACCAGCATTGCTTGG+TGG | - | chr2_2:53038996-53039015 | None:intergenic | 50.0% | |
! | TGTTTGAGGTGTTAGGTCGG+TGG | + | chr2_2:53039132-53039151 | Msa0257300:intron | 50.0% |
CATGACACATATCCGACACC+GGG | - | chr2_2:53039197-53039216 | None:intergenic | 50.0% | |
AGGCCAGGCTTGACTTTGAA+AGG | + | chr2_2:53039977-53039996 | Msa0257300:CDS | 50.0% | |
CGACCTTTCAAAGTCAAGCC+TGG | - | chr2_2:53039983-53040002 | None:intergenic | 50.0% | |
GAAAGAGAAAGCGACCGTAG+TGG | + | chr2_2:53040375-53040394 | Msa0257300:CDS | 50.0% | |
GCTTCTTCTTGAGAAGCCTG+AGG | - | chr2_2:53040525-53040544 | None:intergenic | 50.0% | |
TTGGTGCAACTCGCTTCGAA+GGG | - | chr2_2:53040586-53040605 | None:intergenic | 50.0% | |
AAGCGAGTTGCACCAAGTGA+GGG | + | chr2_2:53040590-53040609 | Msa0257300:CDS | 50.0% | |
CGTATGGTCAGACAGGTTCA+GGG | + | chr2_2:53041925-53041944 | Msa0257300:CDS | 50.0% | |
AGGCCTGCCCATCATTGTAT+AGG | - | chr2_2:53041955-53041974 | None:intergenic | 50.0% | |
!! | TATACAATGATGGGCAGGCC+TGG | + | chr2_2:53041954-53041973 | Msa0257300:CDS | 50.0% |
! | CCGTTGTAATGATGGGACTG+AGG | - | chr2_2:53042102-53042121 | None:intergenic | 50.0% |
TGCGTCTGATGGGGACTTAT+TGG | - | chr2_2:53042234-53042253 | None:intergenic | 50.0% | |
CGTGCAGAAAATGGTACTCC+TGG | + | chr2_2:53042257-53042276 | Msa0257300:CDS | 50.0% | |
AGCACGGACCAACAAGTACA+AGG | + | chr2_2:53042956-53042975 | Msa0257300:CDS | 50.0% | |
AGTGAGCGTCTTTCAAGGAG+TGG | + | chr2_2:53043007-53043026 | Msa0257300:CDS | 50.0% | |
CTTTCAAGGAGTGGCTCAAC+TGG | + | chr2_2:53043016-53043035 | Msa0257300:CDS | 50.0% | |
! | ATTTGCGTTGGCCAAGAAGG+AGG | + | chr2_2:53043222-53043241 | Msa0257300:CDS | 50.0% |
TGTCACATTACAGTGCGGTG+TGG | + | chr2_2:53043623-53043642 | Msa0257300:intron | 50.0% | |
!! | CCAACTTGGTTTGGGACGAA+CGG | + | chr2_2:53043865-53043884 | Msa0257300:intron | 50.0% |
GACTGTTCATGCTTCGGTTC+GGG | - | chr2_2:53043936-53043955 | None:intergenic | 50.0% | |
GGACTGTTCATGCTTCGGTT+CGG | - | chr2_2:53043937-53043956 | None:intergenic | 50.0% | |
GCATGAACAGTCCTAGCTGT+TGG | + | chr2_2:53043944-53043963 | Msa0257300:intron | 50.0% | |
! | GTTGAACAGCCTTGTCTAGG+TGG | + | chr2_2:53044010-53044029 | Msa0257300:intron | 50.0% |
TCTCCAGATGAAGCTTGGTC+AGG | - | chr2_2:53044070-53044089 | None:intergenic | 50.0% | |
GTGACTCTCCAGATGAAGCT+TGG | - | chr2_2:53044075-53044094 | None:intergenic | 50.0% | |
GAGAGTCACTATGCTCGCTT+CGG | + | chr2_2:53044086-53044105 | Msa0257300:CDS | 50.0% | |
! | GCAAATTGACTCCTCCAAGC+AGG | - | chr2_2:53044237-53044256 | None:intergenic | 50.0% |
CTTGGAGGAGTCAATTTGCC+TGG | + | chr2_2:53044238-53044257 | Msa0257300:three_prime_UTR | 50.0% | |
GCACAGACACTCCTCGGATT+AGG | + | chr2_2:53039166-53039185 | Msa0257300:intron | 55.0% | |
ATCAGTGTCCGTGTCGTGTC+TGG | + | chr2_2:53039295-53039314 | Msa0257300:intron | 55.0% | |
CACAGACACCAGACACGACA+CGG | - | chr2_2:53039306-53039325 | None:intergenic | 55.0% | |
! | GGGCCAACTTGCTCTGTCTA+TGG | + | chr2_2:53040417-53040436 | Msa0257300:CDS | 55.0% |
! | CTTGGTGCAACTCGCTTCGA+AGG | - | chr2_2:53040587-53040606 | None:intergenic | 55.0% |
GAAGCGAGTTGCACCAAGTG+AGG | + | chr2_2:53040589-53040608 | Msa0257300:CDS | 55.0% | |
GGTCTCGATCATCCCTCACT+TGG | - | chr2_2:53040605-53040624 | None:intergenic | 55.0% | |
CCAGAAGCTTCCATGGAGGT+AGG | - | chr2_2:53041307-53041326 | None:intergenic | 55.0% | |
CCTACCTCCATGGAAGCTTC+TGG | + | chr2_2:53041304-53041323 | Msa0257300:CDS | 55.0% | |
TCGTCCAGAAGCTTCCATGG+AGG | - | chr2_2:53041311-53041330 | None:intergenic | 55.0% | |
TCCATGGAAGCTTCTGGACG+AGG | + | chr2_2:53041310-53041329 | Msa0257300:CDS | 55.0% | |
GCGTATGGTCAGACAGGTTC+AGG | + | chr2_2:53041924-53041943 | Msa0257300:CDS | 55.0% | |
CCTGGACATCCCGGAGAAAA+GGG | + | chr2_2:53041972-53041991 | Msa0257300:CDS | 55.0% | |
AGACAGTCTCAGCAACCGCA+AGG | + | chr2_2:53042032-53042051 | Msa0257300:CDS | 55.0% | |
GACGCAACCCGTGCAGAAAA+TGG | + | chr2_2:53042248-53042267 | Msa0257300:CDS | 55.0% | |
CTGGGAGTGAGCGTCTTTCA+AGG | + | chr2_2:53043002-53043021 | Msa0257300:CDS | 55.0% | |
ACAGTGCGGTGTGGTTCAGT+TGG | + | chr2_2:53043632-53043651 | Msa0257300:intron | 55.0% | |
GGTATAAAGGTCTGGTGCGC+CGG | - | chr2_2:53043847-53043866 | None:intergenic | 55.0% | |
CCGTTCGTCCCAAACCAAGT+TGG | - | chr2_2:53043868-53043887 | None:intergenic | 55.0% | |
GCTCCTGACCAAGCTTCATC+TGG | + | chr2_2:53044064-53044083 | Msa0257300:CDS | 55.0% | |
AGATTCTGTAGGGCGACCGT+TGG | - | chr2_2:53044161-53044180 | None:intergenic | 55.0% | |
TTGCAGTGGTCACATAGGCC+AGG | - | chr2_2:53044259-53044278 | None:intergenic | 55.0% | |
! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr2_2:53039176-53039195 | Msa0257300:intron | 60.0% |
GATTAGGCGTGTCCCGGTGT+CGG | + | chr2_2:53039182-53039201 | Msa0257300:intron | 60.0% | |
GCCTCGTCCAGAAGCTTCCA+TGG | - | chr2_2:53041314-53041333 | None:intergenic | 60.0% | |
GCCTGGACATCCCGGAGAAA+AGG | + | chr2_2:53041971-53041990 | Msa0257300:CDS | 60.0% | |
! | CCCTTTTCTCCGGGATGTCC+AGG | - | chr2_2:53041975-53041994 | None:intergenic | 60.0% |
AGTCTCAGCAACCGCAAGGC+TGG | + | chr2_2:53042036-53042055 | Msa0257300:CDS | 60.0% | |
! | TGCACGGGTTGCGTCTGATG+GGG | - | chr2_2:53042243-53042262 | None:intergenic | 60.0% |
! | CTGCACGGGTTGCGTCTGAT+GGG | - | chr2_2:53042244-53042263 | None:intergenic | 60.0% |
! | TCTGCACGGGTTGCGTCTGA+TGG | - | chr2_2:53042245-53042264 | None:intergenic | 60.0% |
TTCTGTAGGGCGACCGTTGG+TGG | - | chr2_2:53044158-53044177 | None:intergenic | 60.0% | |
ACCGGGACACGCCTAATCCG+AGG | - | chr2_2:53039180-53039199 | None:intergenic | 65.0% | |
ATGGGCAGGCCTGGACATCC+CGG | + | chr2_2:53041963-53041982 | Msa0257300:CDS | 65.0% | |
ACACCTCGCCGCACCACCAA+CGG | + | chr2_2:53044142-53044161 | Msa0257300:CDS | 65.0% | |
!! | TAGGGCGACCGTTGGTGGTG+CGG | - | chr2_2:53044153-53044172 | None:intergenic | 65.0% |
!! | CGACCGTTGGTGGTGCGGCG+AGG | - | chr2_2:53044148-53044167 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 53038149 | 53044654 | 53038149 | ID=Msa0257300;Name=Msa0257300 |
chr2_2 | mRNA | 53038149 | 53044654 | 53038149 | ID=Msa0257300-mRNA-1;Parent=Msa0257300;Name=Msa0257300-mRNA-1;_AED=0.09;_eAED=0.09;_QI=430|1|1|1|0.83|0.73|19|436|761 |
chr2_2 | exon | 53038149 | 53038185 | 53038149 | ID=Msa0257300-mRNA-1:exon:15902;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53038390 | 53038734 | 53038390 | ID=Msa0257300-mRNA-1:exon:15903;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53038864 | 53039103 | 53038864 | ID=Msa0257300-mRNA-1:exon:15904;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53039510 | 53039654 | 53039510 | ID=Msa0257300-mRNA-1:exon:15905;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53039751 | 53039860 | 53039751 | ID=Msa0257300-mRNA-1:exon:15906;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53039946 | 53040065 | 53039946 | ID=Msa0257300-mRNA-1:exon:15907;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53040256 | 53040438 | 53040256 | ID=Msa0257300-mRNA-1:exon:15908;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53040528 | 53040737 | 53040528 | ID=Msa0257300-mRNA-1:exon:15909;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53040824 | 53040898 | 53040824 | ID=Msa0257300-mRNA-1:exon:15910;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53040980 | 53041126 | 53040980 | ID=Msa0257300-mRNA-1:exon:15911;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53041214 | 53041352 | 53041214 | ID=Msa0257300-mRNA-1:exon:15912;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53041445 | 53041554 | 53041445 | ID=Msa0257300-mRNA-1:exon:15913;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53041912 | 53042073 | 53041912 | ID=Msa0257300-mRNA-1:exon:15914;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53042179 | 53042399 | 53042179 | ID=Msa0257300-mRNA-1:exon:15915;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53042596 | 53042677 | 53042596 | ID=Msa0257300-mRNA-1:exon:15916;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53042956 | 53043060 | 53042956 | ID=Msa0257300-mRNA-1:exon:15917;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53043184 | 53043288 | 53043184 | ID=Msa0257300-mRNA-1:exon:15918;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53044019 | 53044488 | 53044019 | ID=Msa0257300-mRNA-1:exon:15919;Parent=Msa0257300-mRNA-1 |
chr2_2 | exon | 53044509 | 53044654 | 53044509 | ID=Msa0257300-mRNA-1:exon:15920;Parent=Msa0257300-mRNA-1 |
chr2_2 | five_prime_UTR | 53038149 | 53038185 | 53038149 | ID=Msa0257300-mRNA-1:five_prime_utr;Parent=Msa0257300-mRNA-1 |
chr2_2 | five_prime_UTR | 53038390 | 53038734 | 53038390 | ID=Msa0257300-mRNA-1:five_prime_utr;Parent=Msa0257300-mRNA-1 |
chr2_2 | five_prime_UTR | 53038864 | 53038911 | 53038864 | ID=Msa0257300-mRNA-1:five_prime_utr;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53038912 | 53039103 | 53038912 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53039510 | 53039654 | 53039510 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53039751 | 53039860 | 53039751 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53039946 | 53040065 | 53039946 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53040256 | 53040438 | 53040256 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53040528 | 53040737 | 53040528 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53040824 | 53040898 | 53040824 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53040980 | 53041126 | 53040980 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53041214 | 53041352 | 53041214 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53041445 | 53041554 | 53041445 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53041912 | 53042073 | 53041912 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53042179 | 53042399 | 53042179 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53042596 | 53042677 | 53042596 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53042956 | 53043060 | 53042956 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53043184 | 53043288 | 53043184 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | CDS | 53044019 | 53044198 | 53044019 | ID=Msa0257300-mRNA-1:cds;Parent=Msa0257300-mRNA-1 |
chr2_2 | three_prime_UTR | 53044199 | 53044488 | 53044199 | ID=Msa0257300-mRNA-1:three_prime_utr;Parent=Msa0257300-mRNA-1 |
chr2_2 | three_prime_UTR | 53044509 | 53044654 | 53044509 | ID=Msa0257300-mRNA-1:three_prime_utr;Parent=Msa0257300-mRNA-1 |
Gene Sequence |
Protein sequence |