Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261010 | XP_003597029.1 | 98.175 | 274 | 5 | 0 | 1 | 274 | 1 | 274 | 0.0 | 550 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261010 | sp|Q9LSX7|PEX22_ARATH | 66.304 | 276 | 74 | 3 | 14 | 274 | 11 | 282 | 3.72e-119 | 345 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261010 | G7IKL0 | 98.175 | 274 | 5 | 0 | 1 | 274 | 1 | 274 | 0.0 | 550 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017730 | Msa0261010 | 0.804518 | 2.078347e-49 | -8.615850e-47 |
| Msa0190870 | Msa0261010 | 0.910051 | 2.885598e-82 | -8.615850e-47 |
| Msa0245580 | Msa0261010 | 0.804944 | 1.693696e-49 | -8.615850e-47 |
| Msa0261010 | Msa0284180 | 0.808188 | 3.500652e-50 | -8.615850e-47 |
| Msa0261010 | Msa0336450 | 0.874835 | 4.949136e-68 | -8.615850e-47 |
| Msa0261010 | Msa0336540 | 0.922925 | 5.208961e-89 | -8.615850e-47 |
| Msa0261010 | Msa0377820 | 0.815715 | 8.020583e-52 | -8.615850e-47 |
| Msa0261010 | Msa0426580 | 0.818885 | 1.551823e-52 | -8.615850e-47 |
| Msa0261010 | Msa0472930 | 0.825764 | 3.923048e-54 | -8.615850e-47 |
| Msa0261010 | Msa0622790 | 0.825487 | 4.563586e-54 | -8.615850e-47 |
| Msa0261010 | Msa1292020 | 0.801647 | 8.158604e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261010 | MtrunA17_Chr2g0322911 | 98.175 | 274 | 5 | 0 | 1 | 274 | 1 | 274 | 0.0 | 550 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0261010 | AT3G21865.1 | 66.304 | 276 | 74 | 3 | 14 | 274 | 11 | 282 | 3.78e-120 | 345 |
Find 96 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAACTGGGTGACAATTTC+GGG | 0.202791 | 2_2:+59145168 | None:intergenic |
| TAATAGGATATTGGTAAAAT+TGG | 0.213521 | 2_2:-59149752 | Msa0261010:five_prime_UTR |
| CATATTATCATGTTTGTAAA+AGG | 0.226181 | 2_2:+59144594 | None:intergenic |
| TATTAGGATATTCGCACTAT+TGG | 0.276091 | 2_2:-59148504 | Msa0261010:intron |
| ATTAGGATATTCGCACTATT+GGG | 0.278336 | 2_2:-59148503 | Msa0261010:intron |
| TGTGTTCAGTGCTCCATCTT+TGG | 0.282234 | 2_2:-59144965 | Msa0261010:CDS |
| ATATCTCATGGACCGGGTTC+TGG | 0.282612 | 2_2:-59147060 | Msa0261010:CDS |
| AGCTAACTGGGTGACAATTT+CGG | 0.307177 | 2_2:+59145167 | None:intergenic |
| TTCATAAGTGTCTACTAGTT+TGG | 0.313088 | 2_2:-59144889 | Msa0261010:three_prime_UTR |
| TATAGTAACATACAGCTAAC+TGG | 0.320691 | 2_2:+59145154 | None:intergenic |
| ATAAGATAAGATAAAATAAT+AGG | 0.325529 | 2_2:-59149768 | None:intergenic |
| CTTTACCTTCAGATGAATTA+CGG | 0.325787 | 2_2:-59148323 | Msa0261010:CDS |
| AAGTAGTCCAGAGGAGCTTC+AGG | 0.337504 | 2_2:-59147233 | Msa0261010:intron |
| CACTTCAGGTGGTTTGGTTA+AGG | 0.348580 | 2_2:-59146212 | Msa0261010:CDS |
| AAGATAAAATAATAGGATAT+TGG | 0.363620 | 2_2:-59149761 | None:intergenic |
| TTTGGTTTGTGTCAGAATCT+TGG | 0.364462 | 2_2:-59144871 | Msa0261010:three_prime_UTR |
| CTCTGTGCTAGAAGTATTGT+TGG | 0.365848 | 2_2:-59147105 | Msa0261010:CDS |
| TAGGTAACCTGTCGTCTTCT+TGG | 0.368682 | 2_2:-59147271 | Msa0261010:CDS |
| GGTATTCACTTCAGGTGGTT+TGG | 0.370599 | 2_2:-59146218 | Msa0261010:CDS |
| TGCCTCCCTTGCGTAGGATT+AGG | 0.377604 | 2_2:+59148426 | None:intergenic |
| CGCACTATTGGGGCGGTAGC+TGG | 0.384057 | 2_2:-59148492 | Msa0261010:CDS |
| TTTACCTTCAGATGAATTAC+GGG | 0.396554 | 2_2:-59148322 | Msa0261010:CDS |
| CGCAAGGGAGGCAACGGAAA+AGG | 0.403133 | 2_2:-59148416 | Msa0261010:CDS |
| CAAATTCCGGTGAGGCCTTA+CGG | 0.413571 | 2_2:-59149583 | Msa0261010:five_prime_UTR |
| TTTCACACCTGAAGCTCCTC+TGG | 0.413654 | 2_2:+59147226 | None:intergenic |
| GAAGCAGGGGTATTCACTTC+AGG | 0.423138 | 2_2:-59146226 | Msa0261010:CDS |
| TTTCACCTCATCAAACGCTT+TGG | 0.424379 | 2_2:-59149503 | Msa0261010:CDS |
| TCATCTGTCTCTAGAAAAGC+TGG | 0.427031 | 2_2:+59144821 | None:intergenic |
| GTGATTTATATCTCATGGAC+CGG | 0.427068 | 2_2:-59147067 | Msa0261010:CDS |
| TTCGTCAATTAGAACCAGAT+TGG | 0.438867 | 2_2:-59145206 | Msa0261010:CDS |
| ATAAAACATCATACCTTGAC+TGG | 0.444866 | 2_2:+59148270 | None:intergenic |
| GAGGTGAAAGAGGTCTTGTT+TGG | 0.449964 | 2_2:+59149517 | None:intergenic |
| GTAAAATTGGAAGAGAAACT+TGG | 0.450341 | 2_2:-59149739 | Msa0261010:five_prime_UTR |
| TGGTGAAACATGGCCGTGTC+TGG | 0.450786 | 2_2:-59149560 | Msa0261010:exon |
| TTTGAATTTGTGCTAGCTCC+AGG | 0.454433 | 2_2:+59148372 | None:intergenic |
| ATTCTGTGATTTATATCTCA+TGG | 0.455224 | 2_2:-59147072 | Msa0261010:CDS |
| CTTGTAGCGTTAGAAGAAGC+AGG | 0.455948 | 2_2:-59146241 | Msa0261010:CDS |
| CATTGACAAGTATTGGTTGA+AGG | 0.461894 | 2_2:+59144545 | None:intergenic |
| CTCACTATCTGCCCCAAGGT+TGG | 0.469459 | 2_2:+59148118 | None:intergenic |
| CTTTGATGGGTTCTCACACT+AGG | 0.470411 | 2_2:-59144772 | Msa0261010:three_prime_UTR |
| GGTGGTGCATCTAGTAATCC+TGG | 0.473380 | 2_2:-59148390 | Msa0261010:CDS |
| CTCATAGGCGCAGTTGTTGA+CGG | 0.487364 | 2_2:-59149697 | Msa0261010:five_prime_UTR |
| CTCTTCAGCAGCACTGAGAA+TGG | 0.490260 | 2_2:-59145243 | Msa0261010:CDS |
| GAAGTTGAGTGAAGGAAGAA+AGG | 0.490537 | 2_2:-59148092 | Msa0261010:intron |
| AACCTCTGACGACAGCTCAT+AGG | 0.502156 | 2_2:-59149712 | Msa0261010:five_prime_UTR |
| TTTGTGTCGATATGCCAATC+TGG | 0.503340 | 2_2:+59145192 | None:intergenic |
| GATGGGTTCTCACACTAGGT+TGG | 0.517754 | 2_2:-59144768 | Msa0261010:three_prime_UTR |
| GTGAAAGAGGTCTTGTTTGG+AGG | 0.521964 | 2_2:+59149520 | None:intergenic |
| CCAAAGAAAAGTTCCAAAGA+TGG | 0.522578 | 2_2:+59144952 | None:intergenic |
| TGTATTGTTTGTGTCTCCGT+TGG | 0.523086 | 2_2:+59149670 | None:intergenic |
| TAGAGACAGATGAGAAAACT+AGG | 0.523346 | 2_2:-59144811 | Msa0261010:three_prime_UTR |
| TGTGCCCGTAATTCATCTGA+AGG | 0.526195 | 2_2:+59148318 | None:intergenic |
| CGCCTATGAGCTGTCGTCAG+AGG | 0.532495 | 2_2:+59149710 | None:intergenic |
| TCATACACGTGCACAGAAGC+AGG | 0.536678 | 2_2:+59144738 | None:intergenic |
| ATCCTACGCAAGGGAGGCAA+CGG | 0.537120 | 2_2:-59148422 | Msa0261010:CDS |
| TTCCGTTGCCTCCCTTGCGT+AGG | 0.545064 | 2_2:+59148420 | None:intergenic |
| GTGAGGCAGAAGTTGAGTGA+AGG | 0.552513 | 2_2:-59148100 | Msa0261010:CDS |
| GGCCTTACGGTGGTGAAACA+TGG | 0.555565 | 2_2:-59149570 | Msa0261010:exon |
| AGCGTTTGATGAGGTGAAAG+AGG | 0.557278 | 2_2:+59149507 | None:intergenic |
| CGCTTTCGTCATCCAGAACC+CGG | 0.561411 | 2_2:+59147048 | None:intergenic |
| GACAAGTATTGGTTGAAGGA+TGG | 0.564014 | 2_2:+59144549 | None:intergenic |
| AGGTGGTTTGGTTAAGGACA+AGG | 0.566844 | 2_2:-59146206 | Msa0261010:intron |
| GGGAGGCAACGGAAAAGGCA+AGG | 0.576902 | 2_2:-59148411 | Msa0261010:CDS |
| TCACCACCGTAAGGCCTCAC+CGG | 0.578554 | 2_2:+59149577 | None:intergenic |
| TTAGGATATTCGCACTATTG+GGG | 0.584747 | 2_2:-59148502 | Msa0261010:intron |
| CAACCTTGGGGCAGATAGTG+AGG | 0.591229 | 2_2:-59148117 | Msa0261010:CDS |
| GGCCATGTTTCACCACCGTA+AGG | 0.591533 | 2_2:+59149568 | None:intergenic |
| ATCGTTGTCACCACCAGACA+CGG | 0.593071 | 2_2:+59149547 | None:intergenic |
| CTCCTAATCCTACGCAAGGG+AGG | 0.596485 | 2_2:-59148428 | Msa0261010:CDS |
| CTGCCTCACTATCTGCCCCA+AGG | 0.597162 | 2_2:+59148114 | None:intergenic |
| TGAGTTCTTTCAGCCAGTCA+AGG | 0.598134 | 2_2:-59148283 | Msa0261010:intron |
| TTGTAGCGTTAGAAGAAGCA+GGG | 0.599376 | 2_2:-59146240 | Msa0261010:CDS |
| GCAGGGGTATTCACTTCAGG+TGG | 0.601629 | 2_2:-59146223 | Msa0261010:CDS |
| TGATTTATATCTCATGGACC+GGG | 0.604687 | 2_2:-59147066 | Msa0261010:CDS |
| GATCACTCCAAGAAGACGAC+AGG | 0.606234 | 2_2:+59147264 | None:intergenic |
| TAGCACAAATTCAAATGTGT+CGG | 0.607728 | 2_2:-59148364 | Msa0261010:CDS |
| AGATCTCCTAATCCTACGCA+AGG | 0.610661 | 2_2:-59148432 | Msa0261010:CDS |
| ATAGTAACATACAGCTAACT+GGG | 0.617813 | 2_2:+59145155 | None:intergenic |
| GAAGGTAAAGAAGCATCAGA+AGG | 0.624200 | 2_2:+59148336 | None:intergenic |
| AGTTGTTGACGGCAAACCAA+CGG | 0.625235 | 2_2:-59149686 | Msa0261010:five_prime_UTR |
| CCTCTGGACTACTTTCCTCA+AGG | 0.629211 | 2_2:+59147242 | None:intergenic |
| TGAAACATGGCCGTGTCTGG+TGG | 0.631096 | 2_2:-59149557 | Msa0261010:exon |
| TGGAGCACTGAACACATTAG+CGG | 0.631948 | 2_2:+59144972 | None:intergenic |
| CATCTGTCTCTAGAAAAGCT+GGG | 0.635551 | 2_2:+59144822 | None:intergenic |
| AAGCACCAAAGCGTTTGATG+AGG | 0.654478 | 2_2:+59149498 | None:intergenic |
| CCTTGAGGAAAGTAGTCCAG+AGG | 0.659450 | 2_2:-59147242 | Msa0261010:CDS |
| TCTTTGTTCAAATTCCGGTG+AGG | 0.659503 | 2_2:-59149591 | Msa0261010:five_prime_UTR |
| GGATATTCGCACTATTGGGG+CGG | 0.668267 | 2_2:-59148499 | Msa0261010:CDS |
| AGGCAACGGAAAAGGCAAGG+TGG | 0.677448 | 2_2:-59148408 | Msa0261010:CDS |
| GGTTCTGGATGACGAAAGCG+AGG | 0.681958 | 2_2:-59147045 | Msa0261010:intron |
| TCTTCTTGGAGTGATCCTTG+AGG | 0.683304 | 2_2:-59147257 | Msa0261010:CDS |
| TGTAGCGTTAGAAGAAGCAG+GGG | 0.684444 | 2_2:-59146239 | Msa0261010:CDS |
| GATCTCCTAATCCTACGCAA+GGG | 0.687944 | 2_2:-59148431 | Msa0261010:CDS |
| CAACAATACTTCTAGCACAG+AGG | 0.703729 | 2_2:+59147106 | None:intergenic |
| AACATGATAATATGTCATCG+TGG | 0.720893 | 2_2:-59144585 | Msa0261010:three_prime_UTR |
| ATTCCGGTGAGGCCTTACGG+TGG | 0.729776 | 2_2:-59149580 | Msa0261010:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATTTTTAATCTACTTA+AGG | - | chr2_2:59146363-59146382 | Msa0261010:intron | 10.0% |
| !!! | TTTTTGTTAGAAACTTTAAA+TGG | - | chr2_2:59145060-59145079 | Msa0261010:intron | 15.0% |
| !!! | TTTTGTTAGAAACTTTAAAT+GGG | - | chr2_2:59145061-59145080 | Msa0261010:intron | 15.0% |
| !!! | TTTTTTTTGCTTTTAATGTT+GGG | - | chr2_2:59145084-59145103 | Msa0261010:intron | 15.0% |
| !!! | TTCATTTTTACAAAATCATT+CGG | + | chr2_2:59147395-59147414 | None:intergenic | 15.0% |
| !! | TAATAGGATATTGGTAAAAT+TGG | - | chr2_2:59144529-59144548 | Msa0261010:three_prime_UTR | 20.0% |
| !! | ATCATTCAATCAACAATAAA+GGG | + | chr2_2:59144992-59145011 | None:intergenic | 20.0% |
| !! | AATCATTCAATCAACAATAA+AGG | + | chr2_2:59144993-59145012 | None:intergenic | 20.0% |
| !!! | TTATTGTTGATTGAATGATT+AGG | - | chr2_2:59144993-59145012 | Msa0261010:CDS | 20.0% |
| !!! | GTTTTTTTTGCTTTTAATGT+TGG | - | chr2_2:59145083-59145102 | Msa0261010:intron | 20.0% |
| !! | ACCTACTATGTATTTAAATA+AGG | - | chr2_2:59145176-59145195 | Msa0261010:CDS | 20.0% |
| !!! | ACCTTATTTAAATACATAGT+AGG | + | chr2_2:59145180-59145199 | None:intergenic | 20.0% |
| !! | CTATGTATTTAAATAAGGTA+TGG | - | chr2_2:59145181-59145200 | Msa0261010:CDS | 20.0% |
| !!! | AAATGATCAATGTAATGTTT+TGG | - | chr2_2:59145221-59145240 | Msa0261010:CDS | 20.0% |
| !! | AAACTATAAGAGAAACTATT+AGG | - | chr2_2:59145537-59145556 | Msa0261010:intron | 20.0% |
| !!! | ATGATATTGTACTTGTTATT+AGG | - | chr2_2:59145761-59145780 | Msa0261010:intron | 20.0% |
| !! | AAAGCTATAAAAAAATACAG+CGG | + | chr2_2:59146107-59146126 | None:intergenic | 20.0% |
| !!! | AAATTTAAACTCTAAGACAA+TGG | + | chr2_2:59146351-59146370 | None:intergenic | 20.0% |
| !! | TAATCTATAAAGCTATAAAC+AGG | + | chr2_2:59146415-59146434 | None:intergenic | 20.0% |
| !! | AATAAGAATCTCATTACTTT+AGG | - | chr2_2:59146620-59146639 | Msa0261010:intron | 20.0% |
| !! | ATAAGAATCTCATTACTTTA+GGG | - | chr2_2:59146621-59146640 | Msa0261010:intron | 20.0% |
| !! | AGTTATTTATTTAAAAGCGA+AGG | - | chr2_2:59146682-59146701 | Msa0261010:intron | 20.0% |
| !! | TTATTGTCTATCTTAATAAG+TGG | - | chr2_2:59146791-59146810 | Msa0261010:intron | 20.0% |
| !!! | ATAAAACAAAAGTATACGAA+AGG | + | chr2_2:59147085-59147104 | None:intergenic | 20.0% |
| !! | ATATTCGTAACATTGAAAAA+TGG | + | chr2_2:59147363-59147382 | None:intergenic | 20.0% |
| !!! | ATGATTTTGTAAAAATGAAC+TGG | - | chr2_2:59147396-59147415 | Msa0261010:intron | 20.0% |
| !!! | TGATTTTGTAAAAATGAACT+GGG | - | chr2_2:59147397-59147416 | Msa0261010:intron | 20.0% |
| !! | ATTTCATATTCTGAATCTTA+GGG | + | chr2_2:59147456-59147475 | None:intergenic | 20.0% |
| !! | AATTTCATATTCTGAATCTT+AGG | + | chr2_2:59147457-59147476 | None:intergenic | 20.0% |
| !! | TCACAAAAGTTGTTTAAAAA+TGG | + | chr2_2:59147532-59147551 | None:intergenic | 20.0% |
| !!! | TCACAAAAGTTGTTTAAAAT+TGG | - | chr2_2:59147709-59147728 | Msa0261010:intron | 20.0% |
| !!! | TATCATTCCTCTTTTTTTTT+AGG | - | chr2_2:59147741-59147760 | Msa0261010:intron | 20.0% |
| !!! | ATCATTCCTCTTTTTTTTTA+GGG | - | chr2_2:59147742-59147761 | Msa0261010:intron | 20.0% |
| !! | TTACATTCTATCTTTATGTA+TGG | - | chr2_2:59147995-59148014 | Msa0261010:intron | 20.0% |
| !!! | TCTAAAGGTAATCTTTAAAA+TGG | + | chr2_2:59148385-59148404 | None:intergenic | 20.0% |
| !! | CAATAATTAGATAAGAGTAA+AGG | + | chr2_2:59148413-59148432 | None:intergenic | 20.0% |
| !! | TAGAATCTATATATTTGTGA+AGG | - | chr2_2:59148627-59148646 | Msa0261010:intron | 20.0% |
| !! | ATTAGAAAGAAACAATGATA+TGG | + | chr2_2:59149213-59149232 | None:intergenic | 20.0% |
| !!! | ATTCACAATTTTCAAACAAA+AGG | + | chr2_2:59149608-59149627 | None:intergenic | 20.0% |
| !! | CATATTATCATGTTTGTAAA+AGG | + | chr2_2:59149690-59149709 | None:intergenic | 20.0% |
| !!! | AATTTTACATTGACAAGTAT+TGG | + | chr2_2:59149746-59149765 | None:intergenic | 20.0% |
| !! | TGTTTTCTTTGTTCAAATTC+CGG | - | chr2_2:59144685-59144704 | Msa0261010:three_prime_UTR | 25.0% |
| !!! | ACCTTTTTTCATCATTCTAT+TGG | - | chr2_2:59144857-59144876 | Msa0261010:three_prime_UTR | 25.0% |
| ! | TCCAATAGAATGATGAAAAA+AGG | + | chr2_2:59144861-59144880 | None:intergenic | 25.0% |
| ! | TGTTTCTTGTGATATATGAT+TGG | - | chr2_2:59144913-59144932 | Msa0261010:three_prime_UTR | 25.0% |
| ! | AAAACAAACTTTCACTCTTT+AGG | + | chr2_2:59145042-59145061 | None:intergenic | 25.0% |
| ! | AAATAAGGTATGGTTTAAGT+TGG | - | chr2_2:59145191-59145210 | Msa0261010:CDS | 25.0% |
| !!! | GTAATGTTTTGGTCTTTTTT+TGG | - | chr2_2:59145232-59145251 | Msa0261010:CDS | 25.0% |
| ! | GACTTGTAGATTATGTATTA+AGG | - | chr2_2:59145461-59145480 | Msa0261010:intron | 25.0% |
| !!! | GTTTCTCTTATAGTTTTTTC+AGG | + | chr2_2:59145533-59145552 | None:intergenic | 25.0% |
| ! | TGGTATATGATAGAACATTA+TGG | - | chr2_2:59145594-59145613 | Msa0261010:intron | 25.0% |
| ! | AATTCTGAATCATTAAGCAA+AGG | + | chr2_2:59146052-59146071 | None:intergenic | 25.0% |
| ! | AATAACCATAAAACTAAGTC+TGG | + | chr2_2:59146265-59146284 | None:intergenic | 25.0% |
| !!! | ATCATAAGAAATGTCGATTT+GGG | - | chr2_2:59146319-59146338 | Msa0261010:intron | 25.0% |
| ! | AAGGTTAAATTAACATGTCA+TGG | - | chr2_2:59146382-59146401 | Msa0261010:intron | 25.0% |
| ! | TAAGAATCTCATTACTTTAG+GGG | - | chr2_2:59146622-59146641 | Msa0261010:intron | 25.0% |
| ! | CTATGTTTATGTTTCTCTTT+AGG | - | chr2_2:59146735-59146754 | Msa0261010:intron | 25.0% |
| !! | TATGTTTCTCTTTAGGTTAA+AGG | - | chr2_2:59146742-59146761 | Msa0261010:intron | 25.0% |
| ! | ATTCTGTGATTTATATCTCA+TGG | - | chr2_2:59147209-59147228 | Msa0261010:intron | 25.0% |
| ! | CATGATGAGTGATTAATATA+TGG | + | chr2_2:59147278-59147297 | None:intergenic | 25.0% |
| !! | ATCTTAGGGTAAGATATTTT+TGG | + | chr2_2:59147442-59147461 | None:intergenic | 25.0% |
| !!! | CTTTTTTAGTCTCTTCTTAT+TGG | + | chr2_2:59147685-59147704 | None:intergenic | 25.0% |
| ! | ATTTCTCCCTAAAAAAAAAG+AGG | + | chr2_2:59147751-59147770 | None:intergenic | 25.0% |
| !! | TTTATGATCTTTTCCTAGTT+TGG | - | chr2_2:59147814-59147833 | Msa0261010:intron | 25.0% |
| ! | AGAAAAAAACACAATGTTTG+AGG | + | chr2_2:59148118-59148137 | None:intergenic | 25.0% |
| ! | AAAAGGATGACTACATAAAA+AGG | + | chr2_2:59148219-59148238 | None:intergenic | 25.0% |
| ! | TAGAATTTAATTACCATGCA+AGG | - | chr2_2:59148551-59148570 | Msa0261010:intron | 25.0% |
| ! | TGAGATGTTACAAAATTAGA+TGG | - | chr2_2:59148851-59148870 | Msa0261010:intron | 25.0% |
| ! | TATCAAAATAGAGGACAAAA+AGG | + | chr2_2:59148997-59149016 | None:intergenic | 25.0% |
| !!! | ATGTGATTAGTAGTGTTTTT+TGG | + | chr2_2:59149368-59149387 | None:intergenic | 25.0% |
| GTAAAATTGGAAGAGAAACT+TGG | - | chr2_2:59144542-59144561 | Msa0261010:three_prime_UTR | 30.0% | |
| !!! | GCTTTTGTTACTTTCAAGAT+CGG | - | chr2_2:59144802-59144821 | Msa0261010:three_prime_UTR | 30.0% |
| ! | AAATGAGCTTTTATGTGTCA+TGG | - | chr2_2:59145126-59145145 | Msa0261010:intron | 30.0% |
| ! | TGTCATGGTTTTTGTCAAAT+TGG | - | chr2_2:59145141-59145160 | Msa0261010:intron | 30.0% |
| ! | GTCATGGTTTTTGTCAAATT+GGG | - | chr2_2:59145142-59145161 | Msa0261010:intron | 30.0% |
| ! | TCATGGTTTTTGTCAAATTG+GGG | - | chr2_2:59145143-59145162 | Msa0261010:intron | 30.0% |
| TTGGAGCATATGTGTAAATA+AGG | - | chr2_2:59145251-59145270 | Msa0261010:intron | 30.0% | |
| AACAACATTAAAGAGAGAGT+TGG | - | chr2_2:59145368-59145387 | Msa0261010:intron | 30.0% | |
| ACAACATTAAAGAGAGAGTT+GGG | - | chr2_2:59145369-59145388 | Msa0261010:intron | 30.0% | |
| ATTAAGGAGAGTAGATTAGA+TGG | - | chr2_2:59145477-59145496 | Msa0261010:intron | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | - | chr2_2:59145562-59145581 | Msa0261010:intron | 30.0% | |
| ! | TAATGAGTTGGATCGAAATA+TGG | - | chr2_2:59145574-59145593 | Msa0261010:intron | 30.0% |
| AAGTACAATATCATGAGCTT+TGG | + | chr2_2:59145755-59145774 | None:intergenic | 30.0% | |
| TATTAGGATATTCGCACTAT+TGG | - | chr2_2:59145777-59145796 | Msa0261010:intron | 30.0% | |
| ATTAGGATATTCGCACTATT+GGG | - | chr2_2:59145778-59145797 | Msa0261010:intron | 30.0% | |
| TAGCACAAATTCAAATGTGT+CGG | - | chr2_2:59145917-59145936 | Msa0261010:intron | 30.0% | |
| CTTTACCTTCAGATGAATTA+CGG | - | chr2_2:59145958-59145977 | Msa0261010:intron | 30.0% | |
| TTTACCTTCAGATGAATTAC+GGG | - | chr2_2:59145959-59145978 | Msa0261010:intron | 30.0% | |
| ATAAAACATCATACCTTGAC+TGG | + | chr2_2:59146014-59146033 | None:intergenic | 30.0% | |
| ATCATTAAGCAAAGGAAAGT+GGG | + | chr2_2:59146044-59146063 | None:intergenic | 30.0% | |
| AATCATTAAGCAAAGGAAAG+TGG | + | chr2_2:59146045-59146064 | None:intergenic | 30.0% | |
| ! | GATCATAAGAAATGTCGATT+TGG | - | chr2_2:59146318-59146337 | Msa0261010:intron | 30.0% |
| !! | TTTAAACTCTAAGACAATGG+TGG | + | chr2_2:59146348-59146367 | None:intergenic | 30.0% |
| CACACACTTCGTATTTATAA+TGG | + | chr2_2:59146539-59146558 | None:intergenic | 30.0% | |
| !!! | CATAGCTTGTATTTTAAAGC+TGG | + | chr2_2:59146720-59146739 | None:intergenic | 30.0% |
| CAATATAGTTGCGTATAAAC+TGG | - | chr2_2:59146877-59146896 | Msa0261010:intron | 30.0% | |
| TTTGTTTGATCTATGTTTCC+CGG | - | chr2_2:59146963-59146982 | Msa0261010:intron | 30.0% | |
| AACTTATTGGTCATAATAGC+CGG | + | chr2_2:59146985-59147004 | None:intergenic | 30.0% | |
| ATGACCAATAAGTTGTATGT+AGG | - | chr2_2:59146991-59147010 | Msa0261010:intron | 30.0% | |
| GTTACCTACATACAACTTAT+TGG | + | chr2_2:59146998-59147017 | None:intergenic | 30.0% | |
| GTCTTATGTAATGAACTTGA+TGG | - | chr2_2:59147297-59147316 | Msa0261010:intron | 30.0% | |
| TGTAAAAATGAACTGGGATA+TGG | - | chr2_2:59147403-59147422 | Msa0261010:intron | 30.0% | |
| TTCGAACTAAATTTGATCTC+AGG | - | chr2_2:59147921-59147940 | Msa0261010:intron | 30.0% | |
| !! | ATGGTGTCGTGTTATAATAT+TGG | + | chr2_2:59148664-59148683 | None:intergenic | 30.0% |
| AATATTATAACACGACACCA+TGG | - | chr2_2:59148663-59148682 | Msa0261010:intron | 30.0% | |
| ACACCATGGTAAAATATGAT+TGG | - | chr2_2:59148677-59148696 | Msa0261010:intron | 30.0% | |
| ! | GATCCAATCATATTTTACCA+TGG | + | chr2_2:59148683-59148702 | None:intergenic | 30.0% |
| AGTATAAAAAAGTAGTGCAC+AGG | + | chr2_2:59148705-59148724 | None:intergenic | 30.0% | |
| !!! | TGTGCACTACTTTTTTATAC+TGG | - | chr2_2:59148704-59148723 | Msa0261010:intron | 30.0% |
| TGAAAAGATATAACTCTTGC+AGG | + | chr2_2:59148829-59148848 | None:intergenic | 30.0% | |
| AAACATAAGTATGCAGCAAT+CGG | + | chr2_2:59148966-59148985 | None:intergenic | 30.0% | |
| ATAGTAACATACAGCTAACT+GGG | + | chr2_2:59149129-59149148 | None:intergenic | 30.0% | |
| TATAGTAACATACAGCTAAC+TGG | + | chr2_2:59149130-59149149 | None:intergenic | 30.0% | |
| TTCATAAGTGTCTACTAGTT+TGG | - | chr2_2:59149392-59149411 | Msa0261010:intron | 30.0% | |
| AAAAGCTGGGAAAAAATGTA+TGG | + | chr2_2:59149449-59149468 | None:intergenic | 30.0% | |
| !! | AGATTTTCTTCAAGCTTTGA+TGG | - | chr2_2:59149495-59149514 | Msa0261010:CDS | 30.0% |
| !! | GATTTTCTTCAAGCTTTGAT+GGG | - | chr2_2:59149496-59149515 | Msa0261010:CDS | 30.0% |
| AACATGATAATATGTCATCG+TGG | - | chr2_2:59149696-59149715 | Msa0261010:five_prime_UTR | 30.0% | |
| ATGAAAAAAGGTAGAGAGAG+AGG | + | chr2_2:59144849-59144868 | None:intergenic | 35.0% | |
| TGATTGAATGATTAGGAACC+AGG | - | chr2_2:59145000-59145019 | Msa0261010:CDS | 35.0% | |
| GATTGAATGATTAGGAACCA+GGG | - | chr2_2:59145001-59145020 | Msa0261010:CDS | 35.0% | |
| !! | TTTGCTTTTAATGTTGGGTG+TGG | - | chr2_2:59145089-59145108 | Msa0261010:intron | 35.0% |
| !! | TTGCTTTTAATGTTGGGTGT+GGG | - | chr2_2:59145090-59145109 | Msa0261010:intron | 35.0% |
| CAACATTAAAGAGAGAGTTG+GGG | - | chr2_2:59145370-59145389 | Msa0261010:intron | 35.0% | |
| TTAGGATATTCGCACTATTG+GGG | - | chr2_2:59145779-59145798 | Msa0261010:intron | 35.0% | |
| ATCCACAAACATTCATGCAT+TGG | + | chr2_2:59146078-59146097 | None:intergenic | 35.0% | |
| !!! | TGAATTTTTTCAGCCAACCT+TGG | - | chr2_2:59146150-59146169 | Msa0261010:intron | 35.0% |
| !!! | GAATTTTTTCAGCCAACCTT+GGG | - | chr2_2:59146151-59146170 | Msa0261010:intron | 35.0% |
| !!! | AATTTTTTCAGCCAACCTTG+GGG | - | chr2_2:59146152-59146171 | Msa0261010:intron | 35.0% |
| ATGCACTCTTTATGTAGTAG+TGG | - | chr2_2:59146231-59146250 | Msa0261010:CDS | 35.0% | |
| !!! | GTGTTCCAGACTTAGTTTTA+TGG | - | chr2_2:59146257-59146276 | Msa0261010:intron | 35.0% |
| ! | AGGAGATGGTAATTTCTAGA+AGG | + | chr2_2:59146296-59146315 | None:intergenic | 35.0% |
| ! | TAATTAGTAAGCACTAGCCT+AGG | + | chr2_2:59146491-59146510 | None:intergenic | 35.0% |
| ATAGTTGCGTATAAACTGGA+TGG | - | chr2_2:59146881-59146900 | Msa0261010:intron | 35.0% | |
| TAGTTGCGTATAAACTGGAT+GGG | - | chr2_2:59146882-59146901 | Msa0261010:intron | 35.0% | |
| ACTTATTGGTCATAATAGCC+GGG | + | chr2_2:59146984-59147003 | None:intergenic | 35.0% | |
| GTGATTTATATCTCATGGAC+CGG | - | chr2_2:59147214-59147233 | Msa0261010:intron | 35.0% | |
| TGATTTATATCTCATGGACC+GGG | - | chr2_2:59147215-59147234 | Msa0261010:intron | 35.0% | |
| TGTAAACTACAGCACACAAA+AGG | + | chr2_2:59148236-59148255 | None:intergenic | 35.0% | |
| TTTGACTGTGAACATTTGCA+CGG | - | chr2_2:59148318-59148337 | Msa0261010:CDS | 35.0% | |
| AATGGCAAAAGATGTTTCTC+AGG | + | chr2_2:59148367-59148386 | None:intergenic | 35.0% | |
| AGAGTAAAGGTTCTCTCTAA+AGG | + | chr2_2:59148400-59148419 | None:intergenic | 35.0% | |
| AATAAACCGTCATCATGACT+AGG | - | chr2_2:59148501-59148520 | Msa0261010:CDS | 35.0% | |
| ATAAACCGTCATCATGACTA+GGG | - | chr2_2:59148502-59148521 | Msa0261010:intron | 35.0% | |
| ! | ATATGTTTGTTGCCATTTGC+TGG | - | chr2_2:59148756-59148775 | Msa0261010:intron | 35.0% |
| !!! | CATCAGAATTTTAGGTTCCA+AGG | + | chr2_2:59148806-59148825 | None:intergenic | 35.0% |
| ! | GCTACAGATCACAATTTTGT+CGG | + | chr2_2:59148888-59148907 | None:intergenic | 35.0% |
| GGTATGGGATATCAAAATAG+AGG | + | chr2_2:59149006-59149025 | None:intergenic | 35.0% | |
| TTCGTCAATTAGAACCAGAT+TGG | - | chr2_2:59149075-59149094 | Msa0261010:intron | 35.0% | |
| AACAACAAATCATGTTGCAG+AGG | - | chr2_2:59149237-59149256 | Msa0261010:intron | 35.0% | |
| ! | GCAGTTCGTTCTGTTTTATA+AGG | + | chr2_2:59149290-59149309 | None:intergenic | 35.0% |
| CCAAAGAAAAGTTCCAAAGA+TGG | + | chr2_2:59149332-59149351 | None:intergenic | 35.0% | |
| !!! | CCATCTTTGGAACTTTTCTT+TGG | - | chr2_2:59149329-59149348 | Msa0261010:intron | 35.0% |
| !!! | AGTGTTTTTTGGTTCTCATG+TGG | + | chr2_2:59149357-59149376 | None:intergenic | 35.0% |
| !! | TTTGGTTTGTGTCAGAATCT+TGG | - | chr2_2:59149410-59149429 | Msa0261010:intron | 35.0% |
| GGGAAAAAATGTATGGTGAA+AGG | + | chr2_2:59149442-59149461 | None:intergenic | 35.0% | |
| TAGAGACAGATGAGAAAACT+AGG | - | chr2_2:59149470-59149489 | Msa0261010:CDS | 35.0% | |
| ! | TCAGACATTTTGAACTGACA+AGG | - | chr2_2:59149633-59149652 | Msa0261010:five_prime_UTR | 35.0% |
| !! | CATTGACAAGTATTGGTTGA+AGG | + | chr2_2:59149739-59149758 | None:intergenic | 35.0% |
| TGTATTGTTTGTGTCTCCGT+TGG | + | chr2_2:59144614-59144633 | None:intergenic | 40.0% | |
| TCTTTGTTCAAATTCCGGTG+AGG | - | chr2_2:59144690-59144709 | Msa0261010:three_prime_UTR | 40.0% | |
| TTTCACCTCATCAAACGCTT+TGG | - | chr2_2:59144778-59144797 | Msa0261010:three_prime_UTR | 40.0% | |
| TTTGGGCATATATTGCAGAG+AGG | - | chr2_2:59145437-59145456 | Msa0261010:intron | 40.0% | |
| TGGAATAGTCAGATCACTAG+TGG | - | chr2_2:59145497-59145516 | Msa0261010:intron | 40.0% | |
| !! | ACTAAGTGGGATTAGCTACA+TGG | + | chr2_2:59145631-59145650 | None:intergenic | 40.0% |
| ATGTAGCTAATCCCACTTAG+TGG | - | chr2_2:59145630-59145649 | Msa0261010:intron | 40.0% | |
| TGTAGCTAATCCCACTTAGT+GGG | - | chr2_2:59145631-59145650 | Msa0261010:intron | 40.0% | |
| TAATCCCACTTAGTGGGATA+AGG | - | chr2_2:59145637-59145656 | Msa0261010:intron | 40.0% | |
| ! | CTGTTGCGATTGTTTTCACT+TGG | - | chr2_2:59145817-59145836 | Msa0261010:intron | 40.0% |
| ! | TTGCGATTGTTTTCACTTGG+AGG | - | chr2_2:59145820-59145839 | Msa0261010:intron | 40.0% |
| TTTGAATTTGTGCTAGCTCC+AGG | + | chr2_2:59145912-59145931 | None:intergenic | 40.0% | |
| !! | GAAGGTAAAGAAGCATCAGA+AGG | + | chr2_2:59145948-59145967 | None:intergenic | 40.0% |
| AGCCAATGCATGAATGTTTG+TGG | - | chr2_2:59146073-59146092 | Msa0261010:intron | 40.0% | |
| GAAGTTGAGTGAAGGAAGAA+AGG | - | chr2_2:59146189-59146208 | Msa0261010:intron | 40.0% | |
| TTTCTTATGATCGCAGGAGA+TGG | + | chr2_2:59146310-59146329 | None:intergenic | 40.0% | |
| TCGACATTTCTTATGATCGC+AGG | + | chr2_2:59146316-59146335 | None:intergenic | 40.0% | |
| CCTAGGAAGTTGTATACTCT+AGG | + | chr2_2:59146474-59146493 | None:intergenic | 40.0% | |
| CCTAGAGTATACAACTTCCT+AGG | - | chr2_2:59146471-59146490 | Msa0261010:intron | 40.0% | |
| ! | TGGGAATACTTGATGACATG+AGG | - | chr2_2:59146901-59146920 | Msa0261010:intron | 40.0% |
| CAACAATACTTCTAGCACAG+AGG | + | chr2_2:59147178-59147197 | None:intergenic | 40.0% | |
| !! | CTCTGTGCTAGAAGTATTGT+TGG | - | chr2_2:59147176-59147195 | Msa0261010:intron | 40.0% |
| ! | ACGAGAGTATGAGAGAGAAA+GGG | + | chr2_2:59147558-59147577 | None:intergenic | 40.0% |
| ! | AACGAGAGTATGAGAGAGAA+AGG | + | chr2_2:59147559-59147578 | None:intergenic | 40.0% |
| CAGTATGTGTGTTCCAAACT+AGG | + | chr2_2:59147830-59147849 | None:intergenic | 40.0% | |
| AGAGTAGCAAGAGGAATACT+AGG | + | chr2_2:59147947-59147966 | None:intergenic | 40.0% | |
| TTGTAGCGTTAGAAGAAGCA+GGG | - | chr2_2:59148041-59148060 | Msa0261010:intron | 40.0% | |
| AAGTTAACCACCTTCTTGCT+GGG | - | chr2_2:59148144-59148163 | Msa0261010:intron | 40.0% | |
| ! | CCTTTTACATTGTCCTTGCA+TGG | + | chr2_2:59148567-59148586 | None:intergenic | 40.0% |
| CCATGCAAGGACAATGTAAA+AGG | - | chr2_2:59148564-59148583 | Msa0261010:intron | 40.0% | |
| !! | TGCTCTTTTCAAGACATCCT+TGG | - | chr2_2:59148786-59148805 | Msa0261010:intron | 40.0% |
| ! | CTTGCAGGCATCAGAATTTT+AGG | + | chr2_2:59148814-59148833 | None:intergenic | 40.0% |
| GATATCCCATACCTATATGC+AGG | - | chr2_2:59149013-59149032 | Msa0261010:intron | 40.0% | |
| GAGAACCTGCATATAGGTAT+GGG | + | chr2_2:59149021-59149040 | None:intergenic | 40.0% | |
| AGAGAACCTGCATATAGGTA+TGG | + | chr2_2:59149022-59149041 | None:intergenic | 40.0% | |
| ! | TTTGTGTCGATATGCCAATC+TGG | + | chr2_2:59149092-59149111 | None:intergenic | 40.0% |
| AGCTAACTGGGTGACAATTT+CGG | + | chr2_2:59149117-59149136 | None:intergenic | 40.0% | |
| !! | CTGTTTTATAAGGCGCTATG+TGG | + | chr2_2:59149280-59149299 | None:intergenic | 40.0% |
| ! | CATCTGTCTCTAGAAAAGCT+GGG | + | chr2_2:59149462-59149481 | None:intergenic | 40.0% |
| ! | TCATCTGTCTCTAGAAAAGC+TGG | + | chr2_2:59149463-59149482 | None:intergenic | 40.0% |
| !! | GACAAGTATTGGTTGAAGGA+TGG | + | chr2_2:59149735-59149754 | None:intergenic | 40.0% |
| AGTTGTTGACGGCAAACCAA+CGG | - | chr2_2:59144595-59144614 | Msa0261010:three_prime_UTR | 45.0% | |
| !! | GTGAAAGAGGTCTTGTTTGG+AGG | + | chr2_2:59144764-59144783 | None:intergenic | 45.0% |
| !! | GAGGTGAAAGAGGTCTTGTT+TGG | + | chr2_2:59144767-59144786 | None:intergenic | 45.0% |
| AGCGTTTGATGAGGTGAAAG+AGG | + | chr2_2:59144777-59144796 | None:intergenic | 45.0% | |
| ! | AAGCACCAAAGCGTTTGATG+AGG | + | chr2_2:59144786-59144805 | None:intergenic | 45.0% |
| GAATGATTAGGAACCAGGGT+TGG | - | chr2_2:59145005-59145024 | Msa0261010:CDS | 45.0% | |
| GGTTGTTAAGTATCCAACCC+TGG | + | chr2_2:59145021-59145040 | None:intergenic | 45.0% | |
| AGCACCAATGGGAGAAAAGA+TGG | - | chr2_2:59145394-59145413 | Msa0261010:intron | 45.0% | |
| ACCAATGGGAGAAAAGATGG+TGG | - | chr2_2:59145397-59145416 | Msa0261010:intron | 45.0% | |
| ! | TCCACCATCTTTTCTCCCAT+TGG | + | chr2_2:59145401-59145420 | None:intergenic | 45.0% |
| AGTCAGATCACTAGTGGTAG+AGG | - | chr2_2:59145503-59145522 | Msa0261010:intron | 45.0% | |
| ! | AGAGCCTTATCCCACTAAGT+GGG | + | chr2_2:59145644-59145663 | None:intergenic | 45.0% |
| TTAGTGGGATAAGGCTCTCT+TGG | - | chr2_2:59145646-59145665 | Msa0261010:intron | 45.0% | |
| AGATCTCCTAATCCTACGCA+AGG | - | chr2_2:59145849-59145868 | Msa0261010:intron | 45.0% | |
| GATCTCCTAATCCTACGCAA+GGG | - | chr2_2:59145850-59145869 | Msa0261010:intron | 45.0% | |
| TGTGCCCGTAATTCATCTGA+AGG | + | chr2_2:59145966-59145985 | None:intergenic | 45.0% | |
| TGAGTTCTTTCAGCCAGTCA+AGG | - | chr2_2:59145998-59146017 | Msa0261010:intron | 45.0% | |
| TAGGTAACCTGTCGTCTTCT+TGG | - | chr2_2:59147010-59147029 | Msa0261010:intron | 45.0% | |
| TCTTCTTGGAGTGATCCTTG+AGG | - | chr2_2:59147024-59147043 | Msa0261010:intron | 45.0% | |
| TGCTACAACAGAGTAGCAAG+AGG | + | chr2_2:59147956-59147975 | None:intergenic | 45.0% | |
| CTTGTAGCGTTAGAAGAAGC+AGG | - | chr2_2:59148040-59148059 | Msa0261010:intron | 45.0% | |
| TGTAGCGTTAGAAGAAGCAG+GGG | - | chr2_2:59148042-59148061 | Msa0261010:intron | 45.0% | |
| GGTATTCACTTCAGGTGGTT+TGG | - | chr2_2:59148063-59148082 | Msa0261010:intron | 45.0% | |
| !! | CACTTCAGGTGGTTTGGTTA+AGG | - | chr2_2:59148069-59148088 | Msa0261010:intron | 45.0% |
| !! | AGGTGGTTTGGTTAAGGACA+AGG | - | chr2_2:59148075-59148094 | Msa0261010:intron | 45.0% |
| GAAGTTAACCACCTTCTTGC+TGG | - | chr2_2:59148143-59148162 | Msa0261010:intron | 45.0% | |
| GAGCATATACAGCCAGCAAA+TGG | + | chr2_2:59148771-59148790 | None:intergenic | 45.0% | |
| GCTGAAGAGAACCTGCATAT+AGG | + | chr2_2:59149027-59149046 | None:intergenic | 45.0% | |
| GCTAACTGGGTGACAATTTC+GGG | + | chr2_2:59149116-59149135 | None:intergenic | 45.0% | |
| !! | TGGAGCACTGAACACATTAG+CGG | + | chr2_2:59149312-59149331 | None:intergenic | 45.0% |
| TGTGTTCAGTGCTCCATCTT+TGG | - | chr2_2:59149316-59149335 | Msa0261010:intron | 45.0% | |
| !! | CTTTGATGGGTTCTCACACT+AGG | - | chr2_2:59149509-59149528 | Msa0261010:CDS | 45.0% |
| AACCTCTGACGACAGCTCAT+AGG | - | chr2_2:59144569-59144588 | Msa0261010:three_prime_UTR | 50.0% | |
| CTCATAGGCGCAGTTGTTGA+CGG | - | chr2_2:59144584-59144603 | Msa0261010:three_prime_UTR | 50.0% | |
| CAAATTCCGGTGAGGCCTTA+CGG | - | chr2_2:59144698-59144717 | Msa0261010:three_prime_UTR | 50.0% | |
| ATCGTTGTCACCACCAGACA+CGG | + | chr2_2:59144737-59144756 | None:intergenic | 50.0% | |
| GTTGGGTGTGGGTAGAAACT+AGG | - | chr2_2:59145101-59145120 | Msa0261010:intron | 50.0% | |
| AGAGTTGGGGTAGCACCAAT+GGG | - | chr2_2:59145383-59145402 | Msa0261010:intron | 50.0% | |
| !! | GAGAAAAGATGGTGGAGACC+AGG | - | chr2_2:59145405-59145424 | Msa0261010:intron | 50.0% |
| AGACCAGGCTTAGGTGGTTT+GGG | - | chr2_2:59145420-59145439 | Msa0261010:intron | 50.0% | |
| ! | GAGAGCCTTATCCCACTAAG+TGG | + | chr2_2:59145645-59145664 | None:intergenic | 50.0% |
| GGATATTCGCACTATTGGGG+CGG | - | chr2_2:59145782-59145801 | Msa0261010:intron | 50.0% | |
| GGTGGTGCATCTAGTAATCC+TGG | - | chr2_2:59145891-59145910 | Msa0261010:intron | 50.0% | |
| GTGAGGCAGAAGTTGAGTGA+AGG | - | chr2_2:59146181-59146200 | Msa0261010:intron | 50.0% | |
| GATCACTCCAAGAAGACGAC+AGG | + | chr2_2:59147020-59147039 | None:intergenic | 50.0% | |
| CCTCTGGACTACTTTCCTCA+AGG | + | chr2_2:59147042-59147061 | None:intergenic | 50.0% | |
| CCTTGAGGAAAGTAGTCCAG+AGG | - | chr2_2:59147039-59147058 | Msa0261010:intron | 50.0% | |
| AAGTAGTCCAGAGGAGCTTC+AGG | - | chr2_2:59147048-59147067 | Msa0261010:CDS | 50.0% | |
| TTTCACACCTGAAGCTCCTC+TGG | + | chr2_2:59147058-59147077 | None:intergenic | 50.0% | |
| ATATCTCATGGACCGGGTTC+TGG | - | chr2_2:59147221-59147240 | Msa0261010:intron | 50.0% | |
| !! | GAAGCAGGGGTATTCACTTC+AGG | - | chr2_2:59148055-59148074 | Msa0261010:intron | 50.0% |
| ! | CTCTTCAGCAGCACTGAGAA+TGG | - | chr2_2:59149038-59149057 | Msa0261010:intron | 50.0% |
| ! | GATGGGTTCTCACACTAGGT+TGG | - | chr2_2:59149513-59149532 | Msa0261010:CDS | 50.0% |
| TCATACACGTGCACAGAAGC+AGG | + | chr2_2:59149546-59149565 | None:intergenic | 50.0% | |
| GGCCTTACGGTGGTGAAACA+TGG | - | chr2_2:59144711-59144730 | Msa0261010:three_prime_UTR | 55.0% | |
| GGCCATGTTTCACCACCGTA+AGG | + | chr2_2:59144716-59144735 | None:intergenic | 55.0% | |
| TGGTGAAACATGGCCGTGTC+TGG | - | chr2_2:59144721-59144740 | Msa0261010:three_prime_UTR | 55.0% | |
| TGAAACATGGCCGTGTCTGG+TGG | - | chr2_2:59144724-59144743 | Msa0261010:three_prime_UTR | 55.0% | |
| GAGAGTTGGGGTAGCACCAA+TGG | - | chr2_2:59145382-59145401 | Msa0261010:intron | 55.0% | |
| !! | AGATGGTGGAGACCAGGCTT+AGG | - | chr2_2:59145411-59145430 | Msa0261010:intron | 55.0% |
| GAGACCAGGCTTAGGTGGTT+TGG | - | chr2_2:59145419-59145438 | Msa0261010:intron | 55.0% | |
| ATGCCCAAACCACCTAAGCC+TGG | + | chr2_2:59145426-59145445 | None:intergenic | 55.0% | |
| GTGGGATAAGGCTCTCTTGG+TGG | - | chr2_2:59145649-59145668 | Msa0261010:intron | 55.0% | |
| GGATAAGGCTCTCTTGGTGG+TGG | - | chr2_2:59145652-59145671 | Msa0261010:intron | 55.0% | |
| CTCCTAATCCTACGCAAGGG+AGG | - | chr2_2:59145853-59145872 | Msa0261010:intron | 55.0% | |
| TGCCTCCCTTGCGTAGGATT+AGG | + | chr2_2:59145858-59145877 | None:intergenic | 55.0% | |
| ATCCTACGCAAGGGAGGCAA+CGG | - | chr2_2:59145859-59145878 | Msa0261010:intron | 55.0% | |
| AGGCAACGGAAAAGGCAAGG+TGG | - | chr2_2:59145873-59145892 | Msa0261010:intron | 55.0% | |
| CTCACTATCTGCCCCAAGGT+TGG | + | chr2_2:59146166-59146185 | None:intergenic | 55.0% | |
| CAACCTTGGGGCAGATAGTG+AGG | - | chr2_2:59146164-59146183 | Msa0261010:intron | 55.0% | |
| CGCTTTCGTCATCCAGAACC+CGG | + | chr2_2:59147236-59147255 | None:intergenic | 55.0% | |
| !! | GGTTCTGGATGACGAAAGCG+AGG | - | chr2_2:59147236-59147255 | Msa0261010:CDS | 55.0% |
| !! | GCAGGGGTATTCACTTCAGG+TGG | - | chr2_2:59148058-59148077 | Msa0261010:intron | 55.0% |
| AACACTGCCCAGCAAGAAGG+TGG | + | chr2_2:59148154-59148173 | None:intergenic | 55.0% | |
| TGCAACACTGCCCAGCAAGA+AGG | + | chr2_2:59148157-59148176 | None:intergenic | 55.0% | |
| CGCCTATGAGCTGTCGTCAG+AGG | + | chr2_2:59144574-59144593 | None:intergenic | 60.0% | |
| ATTCCGGTGAGGCCTTACGG+TGG | - | chr2_2:59144701-59144720 | Msa0261010:three_prime_UTR | 60.0% | |
| TCACCACCGTAAGGCCTCAC+CGG | + | chr2_2:59144707-59144726 | None:intergenic | 60.0% | |
| TGGTGGAGACCAGGCTTAGG+TGG | - | chr2_2:59145414-59145433 | Msa0261010:intron | 60.0% | |
| TTCCGTTGCCTCCCTTGCGT+AGG | + | chr2_2:59145864-59145883 | None:intergenic | 60.0% | |
| CGCAAGGGAGGCAACGGAAA+AGG | - | chr2_2:59145865-59145884 | Msa0261010:intron | 60.0% | |
| GGGAGGCAACGGAAAAGGCA+AGG | - | chr2_2:59145870-59145889 | Msa0261010:intron | 60.0% | |
| CTGCCTCACTATCTGCCCCA+AGG | + | chr2_2:59146170-59146189 | None:intergenic | 60.0% | |
| CGCACTATTGGGGCGGTAGC+TGG | - | chr2_2:59145789-59145808 | Msa0261010:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 59144526 | 59149777 | 59144526 | ID=Msa0261010;Name=Msa0261010 |
| chr2_2 | mRNA | 59144526 | 59149777 | 59144526 | ID=Msa0261010-mRNA-1;Parent=Msa0261010;Name=Msa0261010-mRNA-1;_AED=0.08;_eAED=0.08;_QI=204|1|1|1|1|1|8|416|275 |
| chr2_2 | exon | 59144526 | 59145046 | 59144526 | ID=Msa0261010-mRNA-1:exon:18239;Parent=Msa0261010-mRNA-1 |
| chr2_2 | exon | 59145167 | 59145268 | 59145167 | ID=Msa0261010-mRNA-1:exon:18238;Parent=Msa0261010-mRNA-1 |
| chr2_2 | exon | 59146207 | 59146272 | 59146207 | ID=Msa0261010-mRNA-1:exon:18237;Parent=Msa0261010-mRNA-1 |
| chr2_2 | exon | 59147046 | 59147147 | 59147046 | ID=Msa0261010-mRNA-1:exon:18236;Parent=Msa0261010-mRNA-1 |
| chr2_2 | exon | 59147234 | 59147290 | 59147234 | ID=Msa0261010-mRNA-1:exon:18235;Parent=Msa0261010-mRNA-1 |
| chr2_2 | exon | 59148093 | 59148140 | 59148093 | ID=Msa0261010-mRNA-1:exon:18234;Parent=Msa0261010-mRNA-1 |
| chr2_2 | exon | 59148284 | 59148520 | 59148284 | ID=Msa0261010-mRNA-1:exon:18233;Parent=Msa0261010-mRNA-1 |
| chr2_2 | exon | 59149463 | 59149777 | 59149463 | ID=Msa0261010-mRNA-1:exon:18232;Parent=Msa0261010-mRNA-1 |
| chr2_2 | five_prime_UTR | 59149574 | 59149777 | 59149574 | ID=Msa0261010-mRNA-1:five_prime_utr;Parent=Msa0261010-mRNA-1 |
| chr2_2 | CDS | 59149463 | 59149573 | 59149463 | ID=Msa0261010-mRNA-1:cds;Parent=Msa0261010-mRNA-1 |
| chr2_2 | CDS | 59148284 | 59148520 | 59148284 | ID=Msa0261010-mRNA-1:cds;Parent=Msa0261010-mRNA-1 |
| chr2_2 | CDS | 59148093 | 59148140 | 59148093 | ID=Msa0261010-mRNA-1:cds;Parent=Msa0261010-mRNA-1 |
| chr2_2 | CDS | 59147234 | 59147290 | 59147234 | ID=Msa0261010-mRNA-1:cds;Parent=Msa0261010-mRNA-1 |
| chr2_2 | CDS | 59147046 | 59147147 | 59147046 | ID=Msa0261010-mRNA-1:cds;Parent=Msa0261010-mRNA-1 |
| chr2_2 | CDS | 59146207 | 59146272 | 59146207 | ID=Msa0261010-mRNA-1:cds;Parent=Msa0261010-mRNA-1 |
| chr2_2 | CDS | 59145167 | 59145268 | 59145167 | ID=Msa0261010-mRNA-1:cds;Parent=Msa0261010-mRNA-1 |
| chr2_2 | CDS | 59144942 | 59145046 | 59144942 | ID=Msa0261010-mRNA-1:cds;Parent=Msa0261010-mRNA-1 |
| chr2_2 | three_prime_UTR | 59144526 | 59144941 | 59144526 | ID=Msa0261010-mRNA-1:three_prime_utr;Parent=Msa0261010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
