Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426580 | XP_013461492.1 | 99.458 | 369 | 2 | 0 | 1 | 369 | 1 | 369 | 0.0 | 755 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426580 | sp|Q9ZVH8|RDO2_ARATH | 53.886 | 386 | 147 | 9 | 6 | 369 | 2 | 378 | 7.57e-118 | 349 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426580 | A0A072V117 | 99.458 | 369 | 2 | 0 | 1 | 369 | 1 | 369 | 0.0 | 755 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0426580 | TR | IWS1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000910 | Msa0426580 | 0.834364 | 3.128602e-56 | -8.615850e-47 |
| Msa0001450 | Msa0426580 | 0.804816 | 1.801694e-49 | -8.615850e-47 |
| Msa0008200 | Msa0426580 | 0.807928 | 3.977863e-50 | -8.615850e-47 |
| Msa0017730 | Msa0426580 | 0.844014 | 9.827507e-59 | -8.615850e-47 |
| Msa0020390 | Msa0426580 | 0.808902 | 2.465488e-50 | -8.615850e-47 |
| Msa0024400 | Msa0426580 | 0.826589 | 2.496770e-54 | -8.615850e-47 |
| Msa0029630 | Msa0426580 | 0.860985 | 1.409634e-63 | -8.615850e-47 |
| Msa0063520 | Msa0426580 | 0.800304 | 1.534459e-48 | -8.615850e-47 |
| Msa0072420 | Msa0426580 | 0.882348 | 1.123503e-70 | -8.615850e-47 |
| Msa0079920 | Msa0426580 | 0.832955 | 7.033363e-56 | -8.615850e-47 |
| Msa0080730 | Msa0426580 | 0.803911 | 2.780289e-49 | -8.615850e-47 |
| Msa0091610 | Msa0426580 | 0.805813 | 1.113540e-49 | -8.615850e-47 |
| Msa0091730 | Msa0426580 | 0.829225 | 5.797855e-55 | -8.615850e-47 |
| Msa0093010 | Msa0426580 | 0.806887 | 6.611102e-50 | -8.615850e-47 |
| Msa0106710 | Msa0426580 | 0.804685 | 1.918813e-49 | -8.615850e-47 |
| Msa0119900 | Msa0426580 | 0.836861 | 7.299535e-57 | -8.615850e-47 |
| Msa0120880 | Msa0426580 | 0.873737 | 1.165818e-67 | -8.615850e-47 |
| Msa0122530 | Msa0426580 | 0.837206 | 5.958294e-57 | -8.615850e-47 |
| Msa0123510 | Msa0426580 | 0.800293 | 1.542633e-48 | -8.615850e-47 |
| Msa0125450 | Msa0426580 | 0.854815 | 9.573753e-62 | -8.615850e-47 |
| Msa0125540 | Msa0426580 | 0.841937 | 3.509528e-58 | -8.615850e-47 |
| Msa0131590 | Msa0426580 | 0.822870 | 1.879480e-53 | -8.615850e-47 |
| Msa0136120 | Msa0426580 | 0.810997 | 8.725561e-51 | -8.615850e-47 |
| Msa0138360 | Msa0426580 | 0.810614 | 1.055934e-50 | -8.615850e-47 |
| Msa0147980 | Msa0426580 | 0.824117 | 9.603701e-54 | -8.615850e-47 |
| Msa0149440 | Msa0426580 | 0.833200 | 6.113293e-56 | -8.615850e-47 |
| Msa0159440 | Msa0426580 | 0.814947 | 1.188562e-51 | -8.615850e-47 |
| Msa0163510 | Msa0426580 | 0.825519 | 4.485885e-54 | -8.615850e-47 |
| Msa0167980 | Msa0426580 | 0.805201 | 1.496525e-49 | -8.615850e-47 |
| Msa0169610 | Msa0426580 | 0.830053 | 3.647321e-55 | -8.615850e-47 |
| Msa0172980 | Msa0426580 | 0.807783 | 4.270187e-50 | -8.615850e-47 |
| Msa0173800 | Msa0426580 | 0.825493 | 4.547940e-54 | -8.615850e-47 |
| Msa0177960 | Msa0426580 | 0.855059 | 8.131283e-62 | -8.615850e-47 |
| Msa0190590 | Msa0426580 | 0.823388 | 1.423176e-53 | -8.615850e-47 |
| Msa0190870 | Msa0426580 | 0.873020 | 2.031034e-67 | -8.615850e-47 |
| Msa0202490 | Msa0426580 | 0.863928 | 1.753225e-64 | -8.615850e-47 |
| Msa0204960 | Msa0426580 | 0.871160 | 8.443359e-67 | -8.615850e-47 |
| Msa0206690 | Msa0426580 | 0.829801 | 4.200681e-55 | -8.615850e-47 |
| Msa0207670 | Msa0426580 | 0.810201 | 1.296610e-50 | -8.615850e-47 |
| Msa0207700 | Msa0426580 | 0.805880 | 1.078147e-49 | -8.615850e-47 |
| Msa0209350 | Msa0426580 | 0.810539 | 1.096391e-50 | -8.615850e-47 |
| Msa0214550 | Msa0426580 | 0.801921 | 7.166891e-49 | -8.615850e-47 |
| Msa0215990 | Msa0426580 | 0.853625 | 2.112072e-61 | -8.615850e-47 |
| Msa0217670 | Msa0426580 | 0.865877 | 4.293828e-65 | -8.615850e-47 |
| Msa0220990 | Msa0426580 | 0.804012 | 2.650109e-49 | -8.615850e-47 |
| Msa0230520 | Msa0426580 | 0.800260 | 1.566303e-48 | -8.615850e-47 |
| Msa0230820 | Msa0426580 | 0.833374 | 5.533097e-56 | -8.615850e-47 |
| Msa0232790 | Msa0426580 | 0.800062 | 1.718481e-48 | -8.615850e-47 |
| Msa0236620 | Msa0426580 | 0.815841 | 7.517234e-52 | -8.615850e-47 |
| Msa0237200 | Msa0426580 | 0.805550 | 1.264648e-49 | -8.615850e-47 |
| Msa0237300 | Msa0426580 | 0.831540 | 1.575391e-55 | -8.615850e-47 |
| Msa0365700 | Msa0426580 | 0.804085 | 2.558316e-49 | -8.615850e-47 |
| Msa0377290 | Msa0426580 | 0.802842 | 4.630305e-49 | -8.615850e-47 |
| Msa0377820 | Msa0426580 | 0.924187 | 9.846034e-90 | -8.615850e-47 |
| Msa0378970 | Msa0426580 | 0.800109 | 1.681399e-48 | -8.615850e-47 |
| Msa0385500 | Msa0426580 | 0.877362 | 6.680719e-69 | -8.615850e-47 |
| Msa0404630 | Msa0426580 | 0.813328 | 2.705614e-51 | -8.615850e-47 |
| Msa0419720 | Msa0426580 | 0.812216 | 4.740748e-51 | -8.615850e-47 |
| Msa0423750 | Msa0426580 | 0.820461 | 6.777499e-53 | -8.615850e-47 |
| Msa0426580 | Msa0434570 | 0.806665 | 7.368447e-50 | -8.615850e-47 |
| Msa0426580 | Msa0434770 | 0.800386 | 1.476683e-48 | -8.615850e-47 |
| Msa0426580 | Msa0437020 | 0.821025 | 5.027721e-53 | -8.615850e-47 |
| Msa0426580 | Msa0439960 | 0.835104 | 2.037216e-56 | -8.615850e-47 |
| Msa0426580 | Msa0450400 | -0.818462 | 1.935868e-52 | -8.615850e-47 |
| Msa0426580 | Msa0456430 | 0.804137 | 2.495808e-49 | -8.615850e-47 |
| Msa0426580 | Msa0462600 | 0.842190 | 3.008116e-58 | -8.615850e-47 |
| Msa0426580 | Msa0463850 | 0.805863 | 1.087192e-49 | -8.615850e-47 |
| Msa0426580 | Msa0472930 | 0.933070 | 3.283357e-95 | -8.615850e-47 |
| Msa0426580 | Msa0484740 | 0.808717 | 2.699458e-50 | -8.615850e-47 |
| Msa0426580 | Msa0491000 | 0.807569 | 4.741603e-50 | -8.615850e-47 |
| Msa0426580 | Msa0511770 | 0.843277 | 1.547141e-58 | -8.615850e-47 |
| Msa0426580 | Msa0517590 | 0.992297 | 1.879993e-192 | -8.615850e-47 |
| Msa0426580 | Msa0527020 | 0.825253 | 5.184983e-54 | -8.615850e-47 |
| Msa0426580 | Msa0527540 | 0.849388 | 3.339361e-60 | -8.615850e-47 |
| Msa0426580 | Msa0531250 | 0.818519 | 1.879441e-52 | -8.615850e-47 |
| Msa0426580 | Msa0542290 | 0.820164 | 7.927495e-53 | -8.615850e-47 |
| Msa0426580 | Msa0542560 | 0.823964 | 1.042802e-53 | -8.615850e-47 |
| Msa0426580 | Msa0547160 | 0.825820 | 3.806038e-54 | -8.615850e-47 |
| Msa0426580 | Msa0547990 | 0.804549 | 2.048397e-49 | -8.615850e-47 |
| Msa0426580 | Msa0549450 | 0.877753 | 4.878298e-69 | -8.615850e-47 |
| Msa0426580 | Msa0549950 | 0.833022 | 6.770313e-56 | -8.615850e-47 |
| Msa0426580 | Msa0581110 | 0.817462 | 3.257020e-52 | -8.615850e-47 |
| Msa0426580 | Msa0604290 | 0.818968 | 1.485761e-52 | -8.615850e-47 |
| Msa0426580 | Msa0610550 | 0.814345 | 1.615546e-51 | -8.615850e-47 |
| Msa0426580 | Msa0622790 | 0.865412 | 6.017974e-65 | -8.615850e-47 |
| Msa0426580 | Msa0628420 | 0.825449 | 4.658584e-54 | -8.615850e-47 |
| Msa0426580 | Msa0634890 | 0.801217 | 9.990843e-49 | -8.615850e-47 |
| Msa0426580 | Msa0642970 | 0.816152 | 6.407375e-52 | -8.615850e-47 |
| Msa0426580 | Msa0646020 | 0.834070 | 3.706677e-56 | -8.615850e-47 |
| Msa0426580 | Msa0646420 | 0.838769 | 2.362583e-57 | -8.615850e-47 |
| Msa0426580 | Msa0651560 | 0.826209 | 3.076024e-54 | -8.615850e-47 |
| Msa0426580 | Msa0662220 | 0.845705 | 3.436733e-59 | -8.615850e-47 |
| Msa0426580 | Msa0665280 | 0.818792 | 1.629349e-52 | -8.615850e-47 |
| Msa0426580 | Msa0682680 | 0.806263 | 8.955945e-50 | -8.615850e-47 |
| Msa0426580 | Msa0689440 | 0.828470 | 8.833921e-55 | -8.615850e-47 |
| Msa0426580 | Msa0690310 | 0.844060 | 9.548761e-59 | -8.615850e-47 |
| Msa0426580 | Msa0693210 | 0.818574 | 1.825840e-52 | -8.615850e-47 |
| Msa0426580 | Msa0693330 | 0.800958 | 1.128791e-48 | -8.615850e-47 |
| Msa0426580 | Msa0698780 | 0.804410 | 2.189265e-49 | -8.615850e-47 |
| Msa0426580 | Msa0708000 | -0.836851 | 7.342882e-57 | -8.615850e-47 |
| Msa0426580 | Msa0741440 | 0.811704 | 6.129392e-51 | -8.615850e-47 |
| Msa0426580 | Msa0752700 | 0.855685 | 5.344025e-62 | -8.615850e-47 |
| Msa0426580 | Msa0761310 | 0.817800 | 2.732493e-52 | -8.615850e-47 |
| Msa0426580 | Msa0786750 | 0.805154 | 1.530520e-49 | -8.615850e-47 |
| Msa0426580 | Msa0794970 | 0.859766 | 3.296131e-63 | -8.615850e-47 |
| Msa0426580 | Msa0800370 | 0.813129 | 2.991929e-51 | -8.615850e-47 |
| Msa0426580 | Msa0808800 | 0.811195 | 7.905604e-51 | -8.615850e-47 |
| Msa0426580 | Msa0822500 | 0.806143 | 9.490908e-50 | -8.615850e-47 |
| Msa0426580 | Msa0828590 | 0.827276 | 1.711188e-54 | -8.615850e-47 |
| Msa0426580 | Msa0831100 | 0.857720 | 1.346312e-62 | -8.615850e-47 |
| Msa0426580 | Msa0834260 | 0.805037 | 1.619372e-49 | -8.615850e-47 |
| Msa0426580 | Msa0872250 | 0.818340 | 2.063257e-52 | -8.615850e-47 |
| Msa0426580 | Msa0880450 | 0.813876 | 2.049848e-51 | -8.615850e-47 |
| Msa0426580 | Msa0892640 | 0.815419 | 9.334831e-52 | -8.615850e-47 |
| Msa0426580 | Msa0894400 | 0.817325 | 3.497276e-52 | -8.615850e-47 |
| Msa0426580 | Msa0910960 | 0.811595 | 6.471002e-51 | -8.615850e-47 |
| Msa0426580 | Msa0921000 | 0.825281 | 5.107332e-54 | -8.615850e-47 |
| Msa0426580 | Msa0934140 | 0.804642 | 1.958696e-49 | -8.615850e-47 |
| Msa0426580 | Msa0936480 | 0.813402 | 2.606485e-51 | -8.615850e-47 |
| Msa0426580 | Msa0944200 | 0.810749 | 9.874149e-51 | -8.615850e-47 |
| Msa0426580 | Msa0958000 | 0.864572 | 1.104254e-64 | -8.615850e-47 |
| Msa0426580 | Msa0959520 | 0.834080 | 3.684683e-56 | -8.615850e-47 |
| Msa0426580 | Msa0974950 | 0.803549 | 3.306644e-49 | -8.615850e-47 |
| Msa0426580 | Msa0980540 | 0.852675 | 3.950981e-61 | -8.615850e-47 |
| Msa0426580 | Msa0985180 | 0.803749 | 3.004944e-49 | -8.615850e-47 |
| Msa0426580 | Msa0992510 | 0.810851 | 9.384842e-51 | -8.615850e-47 |
| Msa0426580 | Msa0995370 | 0.801138 | 1.037132e-48 | -8.615850e-47 |
| Msa0426580 | Msa1002960 | 0.804248 | 2.366694e-49 | -8.615850e-47 |
| Msa0426580 | Msa1021520 | 0.812697 | 3.720557e-51 | -8.615850e-47 |
| Msa0426580 | Msa1036300 | 0.825949 | 3.545446e-54 | -8.615850e-47 |
| Msa0426580 | Msa1037520 | 0.818694 | 1.715209e-52 | -8.615850e-47 |
| Msa0426580 | Msa1039900 | 0.805943 | 1.045777e-49 | -8.615850e-47 |
| Msa0426580 | Msa1059300 | 0.840292 | 9.493609e-58 | -8.615850e-47 |
| Msa0426580 | Msa1071050 | 0.811905 | 5.541618e-51 | -8.615850e-47 |
| Msa0426580 | Msa1075970 | 0.801239 | 9.890559e-49 | -8.615850e-47 |
| Msa0426580 | Msa1089450 | 0.801472 | 8.861501e-49 | -8.615850e-47 |
| Msa0426580 | Msa1118860 | 0.814439 | 1.539701e-51 | -8.615850e-47 |
| Msa0426580 | Msa1123350 | 0.820250 | 7.573564e-53 | -8.615850e-47 |
| Msa0426580 | Msa1123770 | 0.802801 | 4.722722e-49 | -8.615850e-47 |
| Msa0426580 | Msa1126830 | 0.815825 | 7.581910e-52 | -8.615850e-47 |
| Msa0426580 | Msa1127590 | 0.851287 | 9.790746e-61 | -8.615850e-47 |
| Msa0426580 | Msa1128280 | 0.825773 | 3.904198e-54 | -8.615850e-47 |
| Msa0426580 | Msa1130980 | 0.838770 | 2.361030e-57 | -8.615850e-47 |
| Msa0426580 | Msa1133590 | 0.806711 | 7.203355e-50 | -8.615850e-47 |
| Msa0426580 | Msa1165270 | 0.829089 | 6.255371e-55 | -8.615850e-47 |
| Msa0426580 | Msa1165780 | 0.822792 | 1.959852e-53 | -8.615850e-47 |
| Msa0426580 | Msa1175350 | 0.883882 | 3.079598e-71 | -8.615850e-47 |
| Msa0426580 | Msa1178580 | 0.804244 | 2.370985e-49 | -8.615850e-47 |
| Msa0426580 | Msa1184230 | 0.845083 | 5.066019e-59 | -8.615850e-47 |
| Msa0426580 | Msa1197600 | 0.806677 | 7.323462e-50 | -8.615850e-47 |
| Msa0426580 | Msa1206650 | 0.828287 | 9.777252e-55 | -8.615850e-47 |
| Msa0426580 | Msa1210900 | 0.802940 | 4.419226e-49 | -8.615850e-47 |
| Msa0426580 | Msa1212730 | 0.823372 | 1.434797e-53 | -8.615850e-47 |
| Msa0426580 | Msa1212950 | 0.813525 | 2.449526e-51 | -8.615850e-47 |
| Msa0426580 | Msa1228040 | 0.848099 | 7.602769e-60 | -8.615850e-47 |
| Msa0426580 | Msa1233850 | 0.810643 | 1.040820e-50 | -8.615850e-47 |
| Msa0426580 | Msa1235460 | 0.801137 | 1.037747e-48 | -8.615850e-47 |
| Msa0426580 | Msa1254560 | 0.807895 | 4.042173e-50 | -8.615850e-47 |
| Msa0426580 | Msa1258030 | -0.835090 | 2.053671e-56 | -8.615850e-47 |
| Msa0426580 | Msa1259290 | 0.803336 | 3.660170e-49 | -8.615850e-47 |
| Msa0426580 | Msa1260220 | 0.824515 | 7.742431e-54 | -8.615850e-47 |
| Msa0426580 | Msa1262890 | 0.803034 | 4.227174e-49 | -8.615850e-47 |
| Msa0426580 | Msa1267830 | 0.848079 | 7.700764e-60 | -8.615850e-47 |
| Msa0426580 | Msa1271130 | 0.830512 | 2.816268e-55 | -8.615850e-47 |
| Msa0426580 | Msa1276150 | 0.803706 | 3.067083e-49 | -8.615850e-47 |
| Msa0426580 | Msa1277260 | 0.817288 | 3.564093e-52 | -8.615850e-47 |
| Msa0426580 | Msa1292020 | 0.821648 | 3.610224e-53 | -8.615850e-47 |
| Msa0426580 | Msa1308220 | 0.844186 | 8.833904e-59 | -8.615850e-47 |
| Msa0426580 | Msa1315890 | 0.866357 | 3.026174e-65 | -8.615850e-47 |
| Msa0426580 | Msa1327640 | 0.831054 | 2.074634e-55 | -8.615850e-47 |
| Msa0426580 | Msa1334750 | 0.801559 | 8.505408e-49 | -8.615850e-47 |
| Msa0426580 | Msa1336560 | 0.813983 | 1.941425e-51 | -8.615850e-47 |
| Msa0426580 | Msa1340200 | 0.811342 | 7.345890e-51 | -8.615850e-47 |
| Msa0426580 | Msa1341060 | 0.839995 | 1.135027e-57 | -8.615850e-47 |
| Msa0426580 | Msa1351540 | 0.812868 | 3.414489e-51 | -8.615850e-47 |
| Msa0426580 | Msa1356610 | 0.819961 | 8.823136e-53 | -8.615850e-47 |
| Msa0426580 | Msa1362420 | 0.806498 | 7.988459e-50 | -8.615850e-47 |
| Msa0426580 | Msa1365800 | 0.826511 | 2.606459e-54 | -8.615850e-47 |
| Msa0426580 | Msa1367590 | 0.812226 | 4.715636e-51 | -8.615850e-47 |
| Msa0426580 | Msa1368530 | 0.822331 | 2.508689e-53 | -8.615850e-47 |
| Msa0426580 | Msa1373850 | 0.835257 | 1.864586e-56 | -8.615850e-47 |
| Msa0426580 | Msa1376650 | 0.807520 | 4.856802e-50 | -8.615850e-47 |
| Msa0426580 | Msa1384710 | 0.808741 | 2.667854e-50 | -8.615850e-47 |
| Msa0426580 | Msa1385720 | 0.802675 | 5.014047e-49 | -8.615850e-47 |
| Msa0426580 | Msa1392980 | 0.851331 | 9.513942e-61 | -8.615850e-47 |
| Msa0426580 | Msa1411950 | 0.825001 | 5.946607e-54 | -8.615850e-47 |
| Msa0426580 | Msa1411970 | 0.826089 | 3.284337e-54 | -8.615850e-47 |
| Msa0426580 | Msa1414820 | 0.807850 | 4.132917e-50 | -8.615850e-47 |
| Msa0426580 | Msa1418340 | 0.836466 | 9.206356e-57 | -8.615850e-47 |
| Msa0426580 | Msa1433700 | 0.828982 | 6.640390e-55 | -8.615850e-47 |
| Msa0426580 | Msa1434090 | 0.824789 | 6.671047e-54 | -8.615850e-47 |
| Msa0426580 | Msa1434740 | 0.801099 | 1.056501e-48 | -8.615850e-47 |
| Msa0426580 | Msa1454680 | 0.808578 | 2.891620e-50 | -8.615850e-47 |
| Msa0426580 | Msa1458290 | 0.829316 | 5.511384e-55 | -8.615850e-47 |
| Msa0426580 | Msa1459960 | 0.806378 | 8.470568e-50 | -8.615850e-47 |
| Msa0241950 | Msa0426580 | 0.808379 | 3.188666e-50 | -8.615850e-47 |
| Msa0244980 | Msa0426580 | 0.815292 | 9.963072e-52 | -8.615850e-47 |
| Msa0245430 | Msa0426580 | 0.811151 | 8.081534e-51 | -8.615850e-47 |
| Msa0245580 | Msa0426580 | 0.845296 | 4.437339e-59 | -8.615850e-47 |
| Msa0249580 | Msa0426580 | 0.853534 | 2.243203e-61 | -8.615850e-47 |
| Msa0249860 | Msa0426580 | 0.808095 | 3.664372e-50 | -8.615850e-47 |
| Msa0256140 | Msa0426580 | 0.836623 | 8.394515e-57 | -8.615850e-47 |
| Msa0257490 | Msa0426580 | 0.864805 | 9.335316e-65 | -8.615850e-47 |
| Msa0261010 | Msa0426580 | 0.818885 | 1.551823e-52 | -8.615850e-47 |
| Msa0269470 | Msa0426580 | 0.806982 | 6.313888e-50 | -8.615850e-47 |
| Msa0272300 | Msa0426580 | 0.838808 | 2.307141e-57 | -8.615850e-47 |
| Msa0274720 | Msa0426580 | 0.835160 | 1.972686e-56 | -8.615850e-47 |
| Msa0274970 | Msa0426580 | 0.807338 | 5.306613e-50 | -8.615850e-47 |
| Msa0275360 | Msa0426580 | 0.814204 | 1.735035e-51 | -8.615850e-47 |
| Msa0281530 | Msa0426580 | 0.871826 | 5.081589e-67 | -8.615850e-47 |
| Msa0284180 | Msa0426580 | 0.867129 | 1.718601e-65 | -8.615850e-47 |
| Msa0288010 | Msa0426580 | -0.815952 | 7.102316e-52 | -8.615850e-47 |
| Msa0295250 | Msa0426580 | 0.802882 | 4.542395e-49 | -8.615850e-47 |
| Msa0296250 | Msa0426580 | 0.829339 | 5.441980e-55 | -8.615850e-47 |
| Msa0296630 | Msa0426580 | -0.821822 | 3.291047e-53 | -8.615850e-47 |
| Msa0296790 | Msa0426580 | 0.861335 | 1.102842e-63 | -8.615850e-47 |
| Msa0300280 | Msa0426580 | 0.809896 | 1.508630e-50 | -8.615850e-47 |
| Msa0315520 | Msa0426580 | 0.839734 | 1.327143e-57 | -8.615850e-47 |
| Msa0315680 | Msa0426580 | 0.805497 | 1.297374e-49 | -8.615850e-47 |
| Msa0315980 | Msa0426580 | 0.810127 | 1.345280e-50 | -8.615850e-47 |
| Msa0320590 | Msa0426580 | 0.848681 | 5.248303e-60 | -8.615850e-47 |
| Msa0326480 | Msa0426580 | 0.823367 | 1.438692e-53 | -8.615850e-47 |
| Msa0332640 | Msa0426580 | 0.800021 | 1.752235e-48 | -8.615850e-47 |
| Msa0336450 | Msa0426580 | 0.869433 | 3.107074e-66 | -8.615850e-47 |
| Msa0336540 | Msa0426580 | 0.882310 | 1.159630e-70 | -8.615850e-47 |
| Msa0339910 | Msa0426580 | 0.803440 | 3.482102e-49 | -8.615850e-47 |
| Msa0343500 | Msa0426580 | 0.824090 | 9.741996e-54 | -8.615850e-47 |
| Msa0363060 | Msa0426580 | 0.823768 | 1.159469e-53 | -8.615850e-47 |
| Msa0363640 | Msa0426580 | 0.816497 | 5.363985e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426580 | MtrunA17_Chr3g0128651 | 99.458 | 369 | 2 | 0 | 1 | 369 | 1 | 369 | 0.0 | 755 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0426580 | AT2G38560.1 | 53.886 | 386 | 147 | 9 | 6 | 369 | 2 | 378 | 7.69e-119 | 349 |
| Msa0426580 | AT2G42725.1 | 48.031 | 127 | 65 | 1 | 189 | 314 | 104 | 230 | 7.26e-32 | 120 |
| Msa0426580 | AT4G18720.1 | 51.724 | 116 | 55 | 1 | 184 | 298 | 100 | 215 | 1.13e-29 | 115 |
| Msa0426580 | AT5G42325.1 | 40.625 | 128 | 58 | 3 | 189 | 314 | 104 | 215 | 2.79e-19 | 86.3 |
Find 121 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAAAAGGAAGAGCAATTA+TGG | 0.211694 | 3_2:+77008742 | None:intergenic |
| GCGAGTTTGCATTTGGTAAT+AGG | 0.248412 | 3_2:+77009290 | None:intergenic |
| GTCCTTAATGTTTAATCTTA+AGG | 0.250681 | 3_2:-77009529 | Msa0426580:CDS |
| ATTCAGCGCGAGACAAAATA+AGG | 0.257557 | 3_2:-77009713 | Msa0426580:CDS |
| ATCCTTAAGATTAAACATTA+AGG | 0.282366 | 3_2:+77009527 | None:intergenic |
| ATCAGAAGAACCCTGATTTC+CGG | 0.285749 | 3_2:-77009506 | Msa0426580:CDS |
| AGGACCTATACTTGACCTTT+TGG | 0.308451 | 3_2:+77009547 | None:intergenic |
| AGTCCGTATTATTTGAAAAC+TGG | 0.312826 | 3_2:-77009587 | Msa0426580:CDS |
| CTGTTGACTTAATTGCGATA+TGG | 0.314443 | 3_2:-77010079 | Msa0426580:CDS |
| GCCAAGGTGGAGAAAGTTAA+TGG | 0.315639 | 3_2:-77009918 | Msa0426580:CDS |
| CTTGGGTTGTACTATTTAGT+AGG | 0.330015 | 3_2:-77008774 | Msa0426580:three_prime_UTR |
| CCGCAGCCGCAGAACACAAC+AGG | 0.331302 | 3_2:-77012015 | Msa0426580:five_prime_UTR |
| AATTGATCAGTAGTAGCTTT+TGG | 0.339749 | 3_2:+77009345 | None:intergenic |
| GAGGCAACGGGTTTCTTCGC+TGG | 0.347716 | 3_2:+77011778 | None:intergenic |
| ACTGTCACTGCCACACGAAT+AGG | 0.349730 | 3_2:+77009612 | None:intergenic |
| GTATCATCTCTTTCAACCTT+AGG | 0.351555 | 3_2:-77012078 | Msa0426580:five_prime_UTR |
| TCAACTAATGCTCTTGCATT+TGG | 0.360782 | 3_2:+77008847 | None:intergenic |
| GTTACATTTAGAAATTGTTT+AGG | 0.370539 | 3_2:-77009070 | Msa0426580:three_prime_UTR |
| CAGCACTGCGAGTTTGCATT+TGG | 0.373188 | 3_2:+77009283 | None:intergenic |
| AGCATCCCAGGGAGAACATT+CGG | 0.381324 | 3_2:-77010109 | Msa0426580:CDS |
| CTCCTTCGCTTTGATGTTCG+AGG | 0.381420 | 3_2:+77009818 | None:intergenic |
| CGTCATGAGCTCAGCAGAAA+TGG | 0.387279 | 3_2:-77009442 | Msa0426580:CDS |
| GAACGGGGCCTCTGATTCTA+AGG | 0.389336 | 3_2:-77010021 | Msa0426580:CDS |
| TGTTATGTTATCAAATAAGT+TGG | 0.389468 | 3_2:+77008904 | None:intergenic |
| ATCATAGTCTTCAGCTTTGG+TGG | 0.390447 | 3_2:+77009747 | None:intergenic |
| CTTTGGTGGAGCAGCAGCGC+TGG | 0.398518 | 3_2:+77009761 | None:intergenic |
| AGTTGAGTCCCATCCGATCT+TGG | 0.405397 | 3_2:-77008830 | Msa0426580:three_prime_UTR |
| AGAAAAGGAAGAGCAATTAT+GGG | 0.419297 | 3_2:+77008743 | None:intergenic |
| GAAAACTGGGGTCCTTCAAA+TGG | 0.424609 | 3_2:-77009573 | Msa0426580:CDS |
| CCTGTTGTGTTCTGCGGCTG+CGG | 0.429550 | 3_2:+77012015 | None:intergenic |
| TTGATCATAGTCTTCAGCTT+TGG | 0.429713 | 3_2:+77009744 | None:intergenic |
| TACTGTTGAGCCACAGCGGC+TGG | 0.438165 | 3_2:-77009466 | Msa0426580:CDS |
| TTCAAGCGCATCGAGGCAAC+GGG | 0.440343 | 3_2:+77011766 | None:intergenic |
| GCATCCCAGGGAGAACATTC+GGG | 0.444394 | 3_2:-77010108 | Msa0426580:CDS |
| CTCATGACGGCCAGCCGCTG+TGG | 0.450612 | 3_2:+77009456 | None:intergenic |
| CTGTCACTGCCACACGAATA+GGG | 0.453244 | 3_2:+77009613 | None:intergenic |
| TTCTGCGGCTGCGGTGTTGT+TGG | 0.454667 | 3_2:+77012024 | None:intergenic |
| TTTGTTAGTACTGTGGTGAT+TGG | 0.458548 | 3_2:-77009206 | Msa0426580:exon |
| TTATCAAATAAGTTGGGACT+TGG | 0.459330 | 3_2:+77008911 | None:intergenic |
| AGGCAACGGGTTTCTTCGCT+GGG | 0.460026 | 3_2:+77011779 | None:intergenic |
| TTCGTGTAACAGAGAGTGGT+TGG | 0.462260 | 3_2:-77011894 | Msa0426580:intron |
| GTTATGTTATCAAATAAGTT+GGG | 0.466360 | 3_2:+77008905 | None:intergenic |
| TCCTTCAAATGGAGCCCAAA+AGG | 0.467781 | 3_2:-77009562 | Msa0426580:CDS |
| AAACTCTCACCAAGCATCCC+AGG | 0.468100 | 3_2:-77010121 | Msa0426580:CDS |
| CAGAGAGTGGTTGGGTTCGA+TGG | 0.468288 | 3_2:-77011885 | Msa0426580:exon |
| GTGGTTGGGTTCGATGGAGA+AGG | 0.470982 | 3_2:-77011879 | Msa0426580:exon |
| GGTTCATCAAAGCTGAGCTC+TGG | 0.479292 | 3_2:-77009891 | Msa0426580:CDS |
| TTCTTCGCTGGGACTATCAT+CGG | 0.481323 | 3_2:+77011790 | None:intergenic |
| GAGAAACGAAACAAGAGAAA+AGG | 0.481914 | 3_2:+77012054 | None:intergenic |
| AATGTTCTCCCTGGGATGCT+TGG | 0.486291 | 3_2:+77010112 | None:intergenic |
| CAAGTGACATAGGTTGTCAT+AGG | 0.486857 | 3_2:+77009255 | None:intergenic |
| CCCATTAACTTTCTCCACCT+TGG | 0.490756 | 3_2:+77009917 | None:intergenic |
| CCTTTCTCAACCTTCACTGA+AGG | 0.497037 | 3_2:+77009948 | None:intergenic |
| ATGGAAAGACGTAATTATCA+AGG | 0.497212 | 3_2:-77010060 | Msa0426580:CDS |
| GTATCAAATATATGAGCCCT+TGG | 0.497441 | 3_2:-77008792 | Msa0426580:three_prime_UTR |
| GTCCGTATTATTTGAAAACT+GGG | 0.498242 | 3_2:-77009586 | Msa0426580:CDS |
| GTTCAAGCGCATCGAGGCAA+CGG | 0.502578 | 3_2:+77011765 | None:intergenic |
| TCGTGTAACAGAGAGTGGTT+GGG | 0.509152 | 3_2:-77011893 | Msa0426580:intron |
| CCAAGGTGGAGAAAGTTAAT+GGG | 0.509185 | 3_2:-77009917 | Msa0426580:CDS |
| GGGACTATCATCGGTGGAGG+TGG | 0.510748 | 3_2:+77011799 | None:intergenic |
| TTGGGTTGTACTATTTAGTA+GGG | 0.516249 | 3_2:-77008773 | Msa0426580:three_prime_UTR |
| AAAAGCCCGAATGTTCTCCC+TGG | 0.523075 | 3_2:+77010103 | None:intergenic |
| CATGTCAAAGCGTTTAGAAA+AGG | 0.526413 | 3_2:+77008728 | None:intergenic |
| GCAGTTAACACAAGTGACAT+AGG | 0.530050 | 3_2:+77009245 | None:intergenic |
| CTAAGGTTGAGTCAACGAAT+GGG | 0.530166 | 3_2:-77010004 | Msa0426580:CDS |
| TATCAAATATATGAGCCCTT+GGG | 0.532887 | 3_2:-77008791 | Msa0426580:three_prime_UTR |
| GCTCTAGAGTGTTCCAAGAT+CGG | 0.534702 | 3_2:+77008817 | None:intergenic |
| CCTTCAGTGAAGGTTGAGAA+AGG | 0.536034 | 3_2:-77009948 | Msa0426580:CDS |
| GAAGGAGAAAGAGAAAGAGT+TGG | 0.537798 | 3_2:-77011861 | Msa0426580:CDS |
| AGCATCCGCCGCTTTCTTCG+CGG | 0.541475 | 3_2:+77011823 | None:intergenic |
| AGAGGCAGATGAAGATATGA+TGG | 0.547455 | 3_2:-77009655 | Msa0426580:CDS |
| TAGAGTGTTCCAAGATCGGA+TGG | 0.552292 | 3_2:+77008821 | None:intergenic |
| AGAGTGGAAACTCACGAGAA+TGG | 0.556512 | 3_2:+77011990 | None:intergenic |
| GTGGAGAAAGTTAATGGGAA+TGG | 0.557971 | 3_2:-77009912 | Msa0426580:CDS |
| TCTCCGAGATGCTTTAGCTA+AGG | 0.559780 | 3_2:-77009685 | Msa0426580:CDS |
| TTCAGCGCGAGACAAAATAA+GGG | 0.562584 | 3_2:-77009712 | Msa0426580:CDS |
| GCTGAGCTCTGGAAATGTAA+AGG | 0.564072 | 3_2:-77009880 | Msa0426580:CDS |
| TCTAAGGTTGAGTCAACGAA+TGG | 0.570762 | 3_2:-77010005 | Msa0426580:CDS |
| AGTTTGCATTTGGTAATAGG+TGG | 0.578245 | 3_2:+77009293 | None:intergenic |
| AAAGCCCGAATGTTCTCCCT+GGG | 0.578463 | 3_2:+77010104 | None:intergenic |
| CTGATCAATTTAAGTGTGGT+CGG | 0.587454 | 3_2:-77009332 | Msa0426580:CDS |
| TATTCGTGTGGCAGTGACAG+TGG | 0.587816 | 3_2:-77009610 | Msa0426580:CDS |
| GCTTTGTTCGACTGTGAGCG+TGG | 0.588912 | 3_2:-77009375 | Msa0426580:CDS |
| CAGAAATGGCTAGTGAGCAA+AGG | 0.590372 | 3_2:-77009428 | Msa0426580:CDS |
| AGACCTTAGCTAAAGCATCT+CGG | 0.591289 | 3_2:+77009682 | None:intergenic |
| AATGGGGAGAGAGCTAAAGC+TGG | 0.591506 | 3_2:-77009987 | Msa0426580:CDS |
| GTGTTAACTGCAACAACCGT+TGG | 0.591905 | 3_2:-77009233 | Msa0426580:CDS |
| GCAGAAGAGTCCTTCAGTGA+AGG | 0.594554 | 3_2:-77009958 | Msa0426580:CDS |
| AAACAAGAGAAAAGGACCTA+AGG | 0.595218 | 3_2:+77012062 | None:intergenic |
| AAATGTAAAGGCACAAAATG+TGG | 0.596450 | 3_2:-77009868 | Msa0426580:CDS |
| TTCGCTGGGACTATCATCGG+TGG | 0.598548 | 3_2:+77011793 | None:intergenic |
| GAGCCCAAAAGGTCAAGTAT+AGG | 0.599758 | 3_2:-77009551 | Msa0426580:CDS |
| AACTCTCACCAAGCATCCCA+GGG | 0.605206 | 3_2:-77010120 | Msa0426580:CDS |
| CAAAATTCTCGTCAATACCC+AGG | 0.608507 | 3_2:-77011717 | Msa0426580:intron |
| GAAAGGAGAAAGTGCCAAGG+TGG | 0.613295 | 3_2:-77009931 | Msa0426580:CDS |
| GCTGGGACTATCATCGGTGG+AGG | 0.613512 | 3_2:+77011796 | None:intergenic |
| CTACTAAATAGTACAACCCA+AGG | 0.617808 | 3_2:+77008775 | None:intergenic |
| ATGGGGAGAGAGCTAAAGCT+GGG | 0.620446 | 3_2:-77009986 | Msa0426580:CDS |
| AGTGTGGTCGGTGTGGACAA+AGG | 0.621667 | 3_2:-77009320 | Msa0426580:CDS |
| TTTAGCTAAGGTCTTTGAAG+AGG | 0.626494 | 3_2:-77009673 | Msa0426580:CDS |
| TGACTCAACCTTAGAATCAG+AGG | 0.626857 | 3_2:+77010013 | None:intergenic |
| CAATTTAAGTGTGGTCGGTG+TGG | 0.627337 | 3_2:-77009327 | Msa0426580:CDS |
| TACCTCGAACATCAAAGCGA+AGG | 0.634021 | 3_2:-77009820 | Msa0426580:CDS |
| CTCGAACATCAAAGCGAAGG+AGG | 0.641252 | 3_2:-77009817 | Msa0426580:CDS |
| ACTACTGATCAATTTAAGTG+TGG | 0.648979 | 3_2:-77009336 | Msa0426580:CDS |
| GTACGAAGCCGCGAAGAAAG+CGG | 0.650598 | 3_2:-77011831 | Msa0426580:CDS |
| TGAGAAAGGAGAAAGTGCCA+AGG | 0.657225 | 3_2:-77009934 | Msa0426580:CDS |
| AGTACTAACAAAACTTCCAA+CGG | 0.659265 | 3_2:+77009217 | None:intergenic |
| TAAGGTTGAGTCAACGAATG+GGG | 0.661593 | 3_2:-77010003 | Msa0426580:CDS |
| AGAGTGTTCCAAGATCGGAT+GGG | 0.676391 | 3_2:+77008822 | None:intergenic |
| ATGGTGCCTGTTGTGTTCTG+CGG | 0.677677 | 3_2:+77012009 | None:intergenic |
| CATTTCTGCTGAGCTCATGA+CGG | 0.685355 | 3_2:+77009443 | None:intergenic |
| CGAAGCCGCGAAGAAAGCGG+CGG | 0.685814 | 3_2:-77011828 | Msa0426580:CDS |
| TCCGTATTATTTGAAAACTG+GGG | 0.694223 | 3_2:-77009585 | Msa0426580:CDS |
| TGCATGTGACCCTATTCGTG+TGG | 0.704457 | 3_2:-77009622 | Msa0426580:CDS |
| ATTCTGGTGCTACAGTAGAG+CGG | 0.706279 | 3_2:+77009108 | None:intergenic |
| GGTGCTACAGTAGAGCGGTG+TGG | 0.717337 | 3_2:+77009113 | None:intergenic |
| TACTAAATAGTACAACCCAA+GGG | 0.719006 | 3_2:+77008776 | None:intergenic |
| ATGAACGTGTGATGTCATTG+CGG | 0.738608 | 3_2:-77009138 | Msa0426580:three_prime_UTR |
| TGAGCTGTTCAAGCGCATCG+AGG | 0.741948 | 3_2:+77011759 | None:intergenic |
| TTGGTACTGTTGAGCCACAG+CGG | 0.773544 | 3_2:-77009470 | Msa0426580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAGTTATAAATTTGTAAATT+TGG | - | chr3_2:77009343-77009362 | Msa0426580:CDS | 15.0% |
| !! | AAAAATATTGCTATGAAATA+TGG | + | chr3_2:77010101-77010120 | None:intergenic | 15.0% |
| !!! | TGTTTTTAACGTTTTTTGTA+TGG | - | chr3_2:77008894-77008913 | Msa0426580:three_prime_UTR | 20.0% |
| !! | GAATAGAAAAATAATAACCT+GGG | + | chr3_2:77009116-77009135 | None:intergenic | 20.0% |
| !! | TGAATAGAAAAATAATAACC+TGG | + | chr3_2:77009117-77009136 | None:intergenic | 20.0% |
| !!! | GTTTTGTTTTTGGTTAAATT+GGG | - | chr3_2:77009390-77009409 | Msa0426580:CDS | 20.0% |
| !! | AAATCAGAAAAAACTATAAC+GGG | + | chr3_2:77009947-77009966 | None:intergenic | 20.0% |
| !! | CAAATCAGAAAAAACTATAA+CGG | + | chr3_2:77009948-77009967 | None:intergenic | 20.0% |
| !!! | TTTCTGATTTGAATAGATTT+TGG | - | chr3_2:77009957-77009976 | Msa0426580:CDS | 20.0% |
| !! | TTTGTTTAGAAATATCTGTA+GGG | + | chr3_2:77010062-77010081 | None:intergenic | 20.0% |
| !! | ATTTGTTTAGAAATATCTGT+AGG | + | chr3_2:77010063-77010082 | None:intergenic | 20.0% |
| !! | AATACTAGTTCATAGTTTAT+TGG | - | chr3_2:77010151-77010170 | Msa0426580:intron | 20.0% |
| !! | AACAAACTATTTATTAAGCA+AGG | + | chr3_2:77010322-77010341 | None:intergenic | 20.0% |
| !! | ATAGAAAAAACTGTAGTATT+TGG | - | chr3_2:77010520-77010539 | Msa0426580:intron | 20.0% |
| !! | AAAAGAAATAGAGATAGTTA+AGG | - | chr3_2:77010552-77010571 | Msa0426580:intron | 20.0% |
| !! | AAAGAAATAGAGATAGTTAA+GGG | - | chr3_2:77010553-77010572 | Msa0426580:intron | 20.0% |
| !! | GAAACAAGTAAAAATAAGAA+CGG | - | chr3_2:77010775-77010794 | Msa0426580:intron | 20.0% |
| !! | AAACAAGTAAAAATAAGAAC+GGG | - | chr3_2:77010776-77010795 | Msa0426580:intron | 20.0% |
| !! | ATCCTTAAGATTAAACATTA+AGG | + | chr3_2:77011289-77011308 | None:intergenic | 20.0% |
| !! | GTTACATTTAGAAATTGTTT+AGG | - | chr3_2:77011743-77011762 | Msa0426580:CDS | 20.0% |
| !! | GTTATGTTATCAAATAAGTT+GGG | + | chr3_2:77011911-77011930 | None:intergenic | 20.0% |
| !! | TGTTATGTTATCAAATAAGT+TGG | + | chr3_2:77011912-77011931 | None:intergenic | 20.0% |
| !! | TCTATTCACATTGCAAATTT+TGG | - | chr3_2:77009129-77009148 | Msa0426580:three_prime_UTR | 25.0% |
| !!! | TCGATTTTAGGTTTTGTTTT+TGG | - | chr3_2:77009380-77009399 | Msa0426580:CDS | 25.0% |
| !!! | GGTTTTGTTTTTGGTTAAAT+TGG | - | chr3_2:77009389-77009408 | Msa0426580:CDS | 25.0% |
| ! | CAACTGGCTAATTTAAATTA+CGG | + | chr3_2:77009539-77009558 | None:intergenic | 25.0% |
| ! | GAAAATCCAAAACATATACT+CGG | + | chr3_2:77009599-77009618 | None:intergenic | 25.0% |
| !!! | TTTTTAATTCTTTGATGACG+TGG | - | chr3_2:77009729-77009748 | Msa0426580:CDS | 25.0% |
| ! | AACTATGAACTAGTATTTCA+CGG | + | chr3_2:77010148-77010167 | None:intergenic | 25.0% |
| !!! | ACAGTTTTTTCTATCTAGTT+TGG | + | chr3_2:77010514-77010533 | None:intergenic | 25.0% |
| !! | GTAAAGATTTGAGATCAATT+TGG | + | chr3_2:77010583-77010602 | None:intergenic | 25.0% |
| ! | TCAAATCTTTACTTGTTTCA+TGG | - | chr3_2:77010591-77010610 | Msa0426580:intron | 25.0% |
| !! | ATTTTCTGATGTAATCTTTC+AGG | - | chr3_2:77010654-77010673 | Msa0426580:intron | 25.0% |
| ! | AACAAGTAAAAATAAGAACG+GGG | - | chr3_2:77010777-77010796 | Msa0426580:intron | 25.0% |
| ! | GTCCTTAATGTTTAATCTTA+AGG | - | chr3_2:77011284-77011303 | Msa0426580:intron | 25.0% |
| ! | TAAAACCTGACAAAAAACAT+TGG | + | chr3_2:77011862-77011881 | None:intergenic | 25.0% |
| ! | ACGAGAATTTTGTAATTGAC+CGG | + | chr3_2:77009088-77009107 | None:intergenic | 30.0% |
| TTTCGCATGTTATAGTTGTT+TGG | - | chr3_2:77009225-77009244 | Msa0426580:CDS | 30.0% | |
| TTCGCATGTTATAGTTGTTT+GGG | - | chr3_2:77009226-77009245 | Msa0426580:CDS | 30.0% | |
| TTAACATCAACAGAAACTCA+GGG | + | chr3_2:77009417-77009436 | None:intergenic | 30.0% | |
| TTTAACATCAACAGAAACTC+AGG | + | chr3_2:77009418-77009437 | None:intergenic | 30.0% | |
| AATTAAATTAGCACATTGCG+TGG | - | chr3_2:77009436-77009455 | Msa0426580:CDS | 30.0% | |
| !!! | ATAGGTTTTGGATTTTGCAA+AGG | - | chr3_2:77009495-77009514 | Msa0426580:CDS | 30.0% |
| ATTTAAATTAGCCAGTTGCA+TGG | - | chr3_2:77009541-77009560 | Msa0426580:CDS | 30.0% | |
| !! | GTTTTGGATTTTCGAAAAGA+TGG | - | chr3_2:77009606-77009625 | Msa0426580:CDS | 30.0% |
| ! | GATTTTCGAAAAGATGGATA+CGG | - | chr3_2:77009612-77009631 | Msa0426580:CDS | 30.0% |
| ! | ATTTTCGAAAAGATGGATAC+GGG | - | chr3_2:77009613-77009632 | Msa0426580:CDS | 30.0% |
| ! | TCGGAGTTTTCAAAAGAATA+GGG | - | chr3_2:77009668-77009687 | Msa0426580:CDS | 30.0% |
| TATCATTGTTGTCGTTATCT+TGG | - | chr3_2:77009796-77009815 | Msa0426580:CDS | 30.0% | |
| TATCTTGGAATTTATGACCA+AGG | - | chr3_2:77009811-77009830 | Msa0426580:CDS | 30.0% | |
| ! | ACCAAGGATAATGTTATTTG+TGG | - | chr3_2:77009827-77009846 | Msa0426580:CDS | 30.0% |
| ACCACAAATAACATTATCCT+TGG | + | chr3_2:77009831-77009850 | None:intergenic | 30.0% | |
| AATGAAACCAATCCTAACTT+TGG | + | chr3_2:77009882-77009901 | None:intergenic | 30.0% | |
| GGAAATCAACTCTTAATGTT+TGG | - | chr3_2:77009978-77009997 | Msa0426580:CDS | 30.0% | |
| ! | TGTTTGGAACTTATTGAAAC+TGG | - | chr3_2:77009994-77010013 | Msa0426580:CDS | 30.0% |
| GAACTTATTGAAACTGGAAT+GGG | - | chr3_2:77010000-77010019 | Msa0426580:CDS | 30.0% | |
| TATGAAATATGGAGAGGATA+CGG | + | chr3_2:77010090-77010109 | None:intergenic | 30.0% | |
| TATTGCTATGAAATATGGAG+AGG | + | chr3_2:77010096-77010115 | None:intergenic | 30.0% | |
| ACTATGAACTAGTATTTCAC+GGG | + | chr3_2:77010147-77010166 | None:intergenic | 30.0% | |
| ! | ATAGTTTATTGGTCTGATTG+TGG | - | chr3_2:77010162-77010181 | Msa0426580:intron | 30.0% |
| !! | TACCAATTTATCTCTGAAAC+TGG | + | chr3_2:77010454-77010473 | None:intergenic | 30.0% |
| ! | AACTGTAGTATTTGGAATTC+AGG | - | chr3_2:77010528-77010547 | Msa0426580:intron | 30.0% |
| ! | ACTGTAGTATTTGGAATTCA+GGG | - | chr3_2:77010529-77010548 | Msa0426580:intron | 30.0% |
| ATGAAAATCGTAACAAGTAC+AGG | + | chr3_2:77010622-77010641 | None:intergenic | 30.0% | |
| ATGGAAAGACGTAATTATCA+AGG | - | chr3_2:77010753-77010772 | Msa0426580:intron | 30.0% | |
| ! | AAATGTAAAGGCACAAAATG+TGG | - | chr3_2:77010945-77010964 | Msa0426580:intron | 30.0% |
| AGTCCGTATTATTTGAAAAC+TGG | - | chr3_2:77011226-77011245 | Msa0426580:intron | 30.0% | |
| GTCCGTATTATTTGAAAACT+GGG | - | chr3_2:77011227-77011246 | Msa0426580:intron | 30.0% | |
| TCCGTATTATTTGAAAACTG+GGG | - | chr3_2:77011228-77011247 | Msa0426580:intron | 30.0% | |
| ! | ACCCCAGTTTTCAAATAATA+CGG | + | chr3_2:77011232-77011251 | None:intergenic | 30.0% |
| ! | AATTGATCAGTAGTAGCTTT+TGG | + | chr3_2:77011471-77011490 | None:intergenic | 30.0% |
| ACTACTGATCAATTTAAGTG+TGG | - | chr3_2:77011477-77011496 | Msa0426580:intron | 30.0% | |
| AGTACTAACAAAACTTCCAA+CGG | + | chr3_2:77011599-77011618 | None:intergenic | 30.0% | |
| !!! | TGTTTTTTGTCAGGTTTTAC+TGG | - | chr3_2:77011863-77011882 | Msa0426580:CDS | 30.0% |
| ! | TTATCAAATAAGTTGGGACT+TGG | + | chr3_2:77011905-77011924 | None:intergenic | 30.0% |
| TATCAAATATATGAGCCCTT+GGG | - | chr3_2:77012022-77012041 | Msa0426580:five_prime_UTR | 30.0% | |
| TACTAAATAGTACAACCCAA+GGG | + | chr3_2:77012040-77012059 | None:intergenic | 30.0% | |
| ! | TTGGGTTGTACTATTTAGTA+GGG | - | chr3_2:77012040-77012059 | Msa0426580:five_prime_UTR | 30.0% |
| AGAAAAGGAAGAGCAATTAT+GGG | + | chr3_2:77012073-77012092 | None:intergenic | 30.0% | |
| TAGAAAAGGAAGAGCAATTA+TGG | + | chr3_2:77012074-77012093 | None:intergenic | 30.0% | |
| GTATCATCTCTTTCAACCTT+AGG | - | chr3_2:77008735-77008754 | Msa0426580:three_prime_UTR | 35.0% | |
| AAACAAGAGAAAAGGACCTA+AGG | + | chr3_2:77008754-77008773 | None:intergenic | 35.0% | |
| GAGAAACGAAACAAGAGAAA+AGG | + | chr3_2:77008762-77008781 | None:intergenic | 35.0% | |
| CAGAGATTTGATATTCAGAG+TGG | + | chr3_2:77008842-77008861 | None:intergenic | 35.0% | |
| ! | TGAACAGCTCAAGAATTTTC+CGG | - | chr3_2:77009066-77009085 | Msa0426580:three_prime_UTR | 35.0% |
| ! | GTTGTTTGGGTTCAATTGAA+TGG | - | chr3_2:77009239-77009258 | Msa0426580:CDS | 35.0% |
| CACATTGCGTGGATATATAT+GGG | - | chr3_2:77009447-77009466 | Msa0426580:CDS | 35.0% | |
| ! | TATTGAACCGTAATTGACTC+CGG | - | chr3_2:77009470-77009489 | Msa0426580:CDS | 35.0% |
| CAAAATCCAAAACCTATACC+CGG | + | chr3_2:77009492-77009511 | None:intergenic | 35.0% | |
| !! | GTTTTGGATTTTGCAAAGGA+TGG | - | chr3_2:77009499-77009518 | Msa0426580:CDS | 35.0% |
| ! | GATTTTGCAAAGGATGGATA+CGG | - | chr3_2:77009505-77009524 | Msa0426580:CDS | 35.0% |
| ! | ATTTTGCAAAGGATGGATAC+GGG | - | chr3_2:77009506-77009525 | Msa0426580:CDS | 35.0% |
| ! | TTGAGTCCGAGTATATGTTT+TGG | - | chr3_2:77009590-77009609 | Msa0426580:CDS | 35.0% |
| ! | GTCGGAGTTTTCAAAAGAAT+AGG | - | chr3_2:77009667-77009686 | Msa0426580:CDS | 35.0% |
| !! | TTAATTCTTTGATGACGTGG+CGG | - | chr3_2:77009732-77009751 | Msa0426580:CDS | 35.0% |
| !!! | GCAGTTCACTTTTTCTTTGT+CGG | - | chr3_2:77009762-77009781 | Msa0426580:CDS | 35.0% |
| !!! | CAGTTCACTTTTTCTTTGTC+GGG | - | chr3_2:77009763-77009782 | Msa0426580:CDS | 35.0% |
| !!! | AGTTCACTTTTTCTTTGTCG+GGG | - | chr3_2:77009764-77009783 | Msa0426580:CDS | 35.0% |
| AAATGACAGCTAGTTGTGTT+TGG | - | chr3_2:77009851-77009870 | Msa0426580:CDS | 35.0% | |
| TGTTTGGATTCACCAAAGTT+AGG | - | chr3_2:77009867-77009886 | Msa0426580:CDS | 35.0% | |
| ! | GAAAAAACTATAACGGGATC+TGG | + | chr3_2:77009941-77009960 | None:intergenic | 35.0% |
| GGAACTTATTGAAACTGGAA+TGG | - | chr3_2:77009999-77010018 | Msa0426580:CDS | 35.0% | |
| !!! | TACCGCTTTTTTGGTTTTTG+TGG | - | chr3_2:77010205-77010224 | Msa0426580:intron | 35.0% |
| AGCCACAAAAACCAAAAAAG+CGG | + | chr3_2:77010210-77010229 | None:intergenic | 35.0% | |
| CCATAAGCAAGGTTCATAAA+TGG | + | chr3_2:77010239-77010258 | None:intergenic | 35.0% | |
| CCATTTATGAACCTTGCTTA+TGG | - | chr3_2:77010236-77010255 | Msa0426580:intron | 35.0% | |
| GTGAGTATGCTTGTAAGAAA+AGG | + | chr3_2:77010265-77010284 | None:intergenic | 35.0% | |
| GATTCAGCAACAAGAAATTG+TGG | + | chr3_2:77010292-77010311 | None:intergenic | 35.0% | |
| TGCCAGTTTCAGAGATAAAT+TGG | - | chr3_2:77010449-77010468 | Msa0426580:intron | 35.0% | |
| TTCTGATGTAATCTTTCAGG+TGG | - | chr3_2:77010657-77010676 | Msa0426580:intron | 35.0% | |
| ! | TCTGATGTAATCTTTCAGGT+GGG | - | chr3_2:77010658-77010677 | Msa0426580:intron | 35.0% |
| !! | CTGTTGACTTAATTGCGATA+TGG | - | chr3_2:77010734-77010753 | Msa0426580:intron | 35.0% |
| TTGATCATAGTCTTCAGCTT+TGG | + | chr3_2:77011072-77011091 | None:intergenic | 35.0% | |
| ! | TTTAGCTAAGGTCTTTGAAG+AGG | - | chr3_2:77011140-77011159 | Msa0426580:intron | 35.0% |
| ! | AAACTTTTCTCCGGAAATCA+GGG | + | chr3_2:77011320-77011339 | None:intergenic | 35.0% |
| ! | AAAACTTTTCTCCGGAAATC+AGG | + | chr3_2:77011321-77011340 | None:intergenic | 35.0% |
| ! | TACCAAGCAAAACTTTTCTC+CGG | + | chr3_2:77011329-77011348 | None:intergenic | 35.0% |
| CTGATCAATTTAAGTGTGGT+CGG | - | chr3_2:77011481-77011500 | Msa0426580:intron | 35.0% | |
| ! | AGTTTGCATTTGGTAATAGG+TGG | + | chr3_2:77011523-77011542 | None:intergenic | 35.0% |
| !!! | TGGAAGTTTTGTTAGTACTG+TGG | - | chr3_2:77011600-77011619 | Msa0426580:intron | 35.0% |
| TTTGTTAGTACTGTGGTGAT+TGG | - | chr3_2:77011607-77011626 | Msa0426580:intron | 35.0% | |
| CAGTCTGAACAGAAAAATTC+TGG | + | chr3_2:77011724-77011743 | None:intergenic | 35.0% | |
| !!! | TTGCACCAATGTTTTTTGTC+AGG | - | chr3_2:77011854-77011873 | Msa0426580:CDS | 35.0% |
| ! | GTTTTACTGGTGATTCAGAA+TGG | - | chr3_2:77011876-77011895 | Msa0426580:exon | 35.0% |
| TCAACTAATGCTCTTGCATT+TGG | + | chr3_2:77011969-77011988 | None:intergenic | 35.0% | |
| GTATCAAATATATGAGCCCT+TGG | - | chr3_2:77012021-77012040 | Msa0426580:five_prime_UTR | 35.0% | |
| CTACTAAATAGTACAACCCA+AGG | + | chr3_2:77012041-77012060 | None:intergenic | 35.0% | |
| ! | CTTGGGTTGTACTATTTAGT+AGG | - | chr3_2:77012039-77012058 | Msa0426580:five_prime_UTR | 35.0% |
| ! | CATGTCAAAGCGTTTAGAAA+AGG | + | chr3_2:77012088-77012107 | None:intergenic | 35.0% |
| GAAGGAGAAAGAGAAAGAGT+TGG | - | chr3_2:77008952-77008971 | Msa0426580:three_prime_UTR | 40.0% | |
| CAAAATTCTCGTCAATACCC+AGG | - | chr3_2:77009096-77009115 | Msa0426580:three_prime_UTR | 40.0% | |
| !! | GAGCTGTGTTGTTCGATTTT+AGG | - | chr3_2:77009368-77009387 | Msa0426580:CDS | 40.0% |
| GCACATTGCGTGGATATATA+TGG | - | chr3_2:77009446-77009465 | Msa0426580:CDS | 40.0% | |
| ! | ATTGAACCGTAATTGACTCC+GGG | - | chr3_2:77009471-77009490 | Msa0426580:CDS | 40.0% |
| TATCCTGATATCCATGCAAC+TGG | + | chr3_2:77009555-77009574 | None:intergenic | 40.0% | |
| !!! | GTTCACTTTTTCTTTGTCGG+GGG | - | chr3_2:77009765-77009784 | Msa0426580:CDS | 40.0% |
| GGATTCACCAAAGTTAGGAT+TGG | - | chr3_2:77009872-77009891 | Msa0426580:CDS | 40.0% | |
| AAATATGGAGAGGATACGGT+AGG | + | chr3_2:77010086-77010105 | None:intergenic | 40.0% | |
| ACCAAAAAAGCGGTATAGTG+TGG | + | chr3_2:77010200-77010219 | None:intergenic | 40.0% | |
| AGAAAAGGAAGCCATAAGCA+AGG | + | chr3_2:77010250-77010269 | None:intergenic | 40.0% | |
| TGACTCAACCTTAGAATCAG+AGG | + | chr3_2:77010803-77010822 | None:intergenic | 40.0% | |
| ! | TCTAAGGTTGAGTCAACGAA+TGG | - | chr3_2:77010808-77010827 | Msa0426580:intron | 40.0% |
| CTAAGGTTGAGTCAACGAAT+GGG | - | chr3_2:77010809-77010828 | Msa0426580:intron | 40.0% | |
| TAAGGTTGAGTCAACGAATG+GGG | - | chr3_2:77010810-77010829 | Msa0426580:intron | 40.0% | |
| CCAAGGTGGAGAAAGTTAAT+GGG | - | chr3_2:77010896-77010915 | Msa0426580:intron | 40.0% | |
| GTGGAGAAAGTTAATGGGAA+TGG | - | chr3_2:77010901-77010920 | Msa0426580:intron | 40.0% | |
| ! | ATTTTCTTTGCCGCAGATAC+TGG | + | chr3_2:77011027-77011046 | None:intergenic | 40.0% |
| ! | ATCATAGTCTTCAGCTTTGG+TGG | + | chr3_2:77011069-77011088 | None:intergenic | 40.0% |
| ATTCAGCGCGAGACAAAATA+AGG | - | chr3_2:77011100-77011119 | Msa0426580:intron | 40.0% | |
| TTCAGCGCGAGACAAAATAA+GGG | - | chr3_2:77011101-77011120 | Msa0426580:intron | 40.0% | |
| ! | AGACCTTAGCTAAAGCATCT+CGG | + | chr3_2:77011134-77011153 | None:intergenic | 40.0% |
| AGAGGCAGATGAAGATATGA+TGG | - | chr3_2:77011158-77011177 | Msa0426580:intron | 40.0% | |
| ! | GGACCTATACTTGACCTTTT+GGG | + | chr3_2:77011268-77011287 | None:intergenic | 40.0% |
| ! | AGGACCTATACTTGACCTTT+TGG | + | chr3_2:77011269-77011288 | None:intergenic | 40.0% |
| ATCAGAAGAACCCTGATTTC+CGG | - | chr3_2:77011307-77011326 | Msa0426580:intron | 40.0% | |
| ! | TTCCGGAGAAAAGTTTTGCT+TGG | - | chr3_2:77011324-77011343 | Msa0426580:intron | 40.0% |
| ! | GCGAGTTTGCATTTGGTAAT+AGG | + | chr3_2:77011526-77011545 | None:intergenic | 40.0% |
| CAAGTGACATAGGTTGTCAT+AGG | + | chr3_2:77011561-77011580 | None:intergenic | 40.0% | |
| GCAGTTAACACAAGTGACAT+AGG | + | chr3_2:77011571-77011590 | None:intergenic | 40.0% | |
| ATGAACGTGTGATGTCATTG+CGG | - | chr3_2:77011675-77011694 | Msa0426580:intron | 40.0% | |
| AGAGTGGAAACTCACGAGAA+TGG | + | chr3_2:77008826-77008845 | None:intergenic | 45.0% | |
| ! | GGTTTTCGTGTAACAGAGAG+TGG | - | chr3_2:77008915-77008934 | Msa0426580:three_prime_UTR | 45.0% |
| TTCGTGTAACAGAGAGTGGT+TGG | - | chr3_2:77008919-77008938 | Msa0426580:three_prime_UTR | 45.0% | |
| TCGTGTAACAGAGAGTGGTT+GGG | - | chr3_2:77008920-77008939 | Msa0426580:three_prime_UTR | 45.0% | |
| TTCTTCGCTGGGACTATCAT+CGG | + | chr3_2:77009026-77009045 | None:intergenic | 45.0% | |
| CCTATACCCGGAGTCAATTA+CGG | + | chr3_2:77009480-77009499 | None:intergenic | 45.0% | |
| ! | TTGACTCCGGGTATAGGTTT+TGG | - | chr3_2:77009483-77009502 | Msa0426580:CDS | 45.0% |
| TAGCCAGTTGCATGGATATC+AGG | - | chr3_2:77009549-77009568 | Msa0426580:CDS | 45.0% | |
| CGAAAAGATGGATACGGGTA+TGG | - | chr3_2:77009618-77009637 | Msa0426580:CDS | 45.0% | |
| !!! | GCCACACTATACCGCTTTTT+TGG | - | chr3_2:77010196-77010215 | Msa0426580:intron | 45.0% |
| CCTTTCTCAACCTTCACTGA+AGG | + | chr3_2:77010868-77010887 | None:intergenic | 45.0% | |
| CCTTCAGTGAAGGTTGAGAA+AGG | - | chr3_2:77010865-77010884 | Msa0426580:intron | 45.0% | |
| !! | TGAGAAAGGAGAAAGTGCCA+AGG | - | chr3_2:77010879-77010898 | Msa0426580:intron | 45.0% |
| GCCAAGGTGGAGAAAGTTAA+TGG | - | chr3_2:77010895-77010914 | Msa0426580:intron | 45.0% | |
| CCCATTAACTTTCTCCACCT+TGG | + | chr3_2:77010899-77010918 | None:intergenic | 45.0% | |
| !! | GCTGAGCTCTGGAAATGTAA+AGG | - | chr3_2:77010933-77010952 | Msa0426580:intron | 45.0% |
| TACCTCGAACATCAAAGCGA+AGG | - | chr3_2:77010993-77011012 | Msa0426580:intron | 45.0% | |
| GGAGGAAAAACCAGTATCTG+CGG | - | chr3_2:77011014-77011033 | Msa0426580:intron | 45.0% | |
| TCTCCGAGATGCTTTAGCTA+AGG | - | chr3_2:77011128-77011147 | Msa0426580:intron | 45.0% | |
| GAAAACTGGGGTCCTTCAAA+TGG | - | chr3_2:77011240-77011259 | Msa0426580:intron | 45.0% | |
| TCCTTCAAATGGAGCCCAAA+AGG | - | chr3_2:77011251-77011270 | Msa0426580:intron | 45.0% | |
| ! | ACCTTTTGGGCTCCATTTGA+AGG | + | chr3_2:77011255-77011274 | None:intergenic | 45.0% |
| GAGCCCAAAAGGTCAAGTAT+AGG | - | chr3_2:77011262-77011281 | Msa0426580:intron | 45.0% | |
| CATTTCTGCTGAGCTCATGA+CGG | + | chr3_2:77011373-77011392 | None:intergenic | 45.0% | |
| CAGAAATGGCTAGTGAGCAA+AGG | - | chr3_2:77011385-77011404 | Msa0426580:intron | 45.0% | |
| CAATTTAAGTGTGGTCGGTG+TGG | - | chr3_2:77011486-77011505 | Msa0426580:intron | 45.0% | |
| GTGTTAACTGCAACAACCGT+TGG | - | chr3_2:77011580-77011599 | Msa0426580:intron | 45.0% | |
| !! | ATTCTGGTGCTACAGTAGAG+CGG | + | chr3_2:77011708-77011727 | None:intergenic | 45.0% |
| ! | AGAGTGTTCCAAGATCGGAT+GGG | + | chr3_2:77011994-77012013 | None:intergenic | 45.0% |
| ! | TAGAGTGTTCCAAGATCGGA+TGG | + | chr3_2:77011995-77012014 | None:intergenic | 45.0% |
| !! | GCTCTAGAGTGTTCCAAGAT+CGG | + | chr3_2:77011999-77012018 | None:intergenic | 45.0% |
| ATGGTGCCTGTTGTGTTCTG+CGG | + | chr3_2:77008807-77008826 | None:intergenic | 50.0% | |
| ! | CCGTAATTGACTCCGGGTAT+AGG | - | chr3_2:77009477-77009496 | Msa0426580:CDS | 50.0% |
| GCAAAGGATGGATACGGGTA+AGG | - | chr3_2:77009511-77009530 | Msa0426580:CDS | 50.0% | |
| GGGTATGGCACTGTTACTGA+GGG | - | chr3_2:77009633-77009652 | Msa0426580:CDS | 50.0% | |
| TTTCTTTGTCGGGGGACTGA+AGG | - | chr3_2:77009773-77009792 | Msa0426580:CDS | 50.0% | |
| AAACTCTCACCAAGCATCCC+AGG | - | chr3_2:77010692-77010711 | Msa0426580:intron | 50.0% | |
| AACTCTCACCAAGCATCCCA+GGG | - | chr3_2:77010693-77010712 | Msa0426580:intron | 50.0% | |
| AATGTTCTCCCTGGGATGCT+TGG | + | chr3_2:77010704-77010723 | None:intergenic | 50.0% | |
| AGCATCCCAGGGAGAACATT+CGG | - | chr3_2:77010704-77010723 | Msa0426580:intron | 50.0% | |
| AAAGCCCGAATGTTCTCCCT+GGG | + | chr3_2:77010712-77010731 | None:intergenic | 50.0% | |
| AAAAGCCCGAATGTTCTCCC+TGG | + | chr3_2:77010713-77010732 | None:intergenic | 50.0% | |
| AATGGGGAGAGAGCTAAAGC+TGG | - | chr3_2:77010826-77010845 | Msa0426580:intron | 50.0% | |
| ATGGGGAGAGAGCTAAAGCT+GGG | - | chr3_2:77010827-77010846 | Msa0426580:intron | 50.0% | |
| GCAGAAGAGTCCTTCAGTGA+AGG | - | chr3_2:77010855-77010874 | Msa0426580:intron | 50.0% | |
| !! | GAAAGGAGAAAGTGCCAAGG+TGG | - | chr3_2:77010882-77010901 | Msa0426580:intron | 50.0% |
| GGTTCATCAAAGCTGAGCTC+TGG | - | chr3_2:77010922-77010941 | Msa0426580:intron | 50.0% | |
| CTCCTTCGCTTTGATGTTCG+AGG | + | chr3_2:77010998-77011017 | None:intergenic | 50.0% | |
| CTCGAACATCAAAGCGAAGG+AGG | - | chr3_2:77010996-77011015 | Msa0426580:intron | 50.0% | |
| TGCATGTGACCCTATTCGTG+TGG | - | chr3_2:77011191-77011210 | Msa0426580:intron | 50.0% | |
| CTGTCACTGCCACACGAATA+GGG | + | chr3_2:77011203-77011222 | None:intergenic | 50.0% | |
| ACTGTCACTGCCACACGAAT+AGG | + | chr3_2:77011204-77011223 | None:intergenic | 50.0% | |
| TATTCGTGTGGCAGTGACAG+TGG | - | chr3_2:77011203-77011222 | Msa0426580:intron | 50.0% | |
| TTGGTACTGTTGAGCCACAG+CGG | - | chr3_2:77011343-77011362 | Msa0426580:intron | 50.0% | |
| CGTCATGAGCTCAGCAGAAA+TGG | - | chr3_2:77011371-77011390 | Msa0426580:intron | 50.0% | |
| CAGCACTGCGAGTTTGCATT+TGG | + | chr3_2:77011533-77011552 | None:intergenic | 50.0% | |
| AGTTGAGTCCCATCCGATCT+TGG | - | chr3_2:77011983-77012002 | Msa0426580:intron | 50.0% | |
| CAGAGAGTGGTTGGGTTCGA+TGG | - | chr3_2:77008928-77008947 | Msa0426580:three_prime_UTR | 55.0% | |
| GTGGTTGGGTTCGATGGAGA+AGG | - | chr3_2:77008934-77008953 | Msa0426580:three_prime_UTR | 55.0% | |
| GTACGAAGCCGCGAAGAAAG+CGG | - | chr3_2:77008982-77009001 | Msa0426580:three_prime_UTR | 55.0% | |
| TTCGCTGGGACTATCATCGG+TGG | + | chr3_2:77009023-77009042 | None:intergenic | 55.0% | |
| ! | AGGCAACGGGTTTCTTCGCT+GGG | + | chr3_2:77009037-77009056 | None:intergenic | 55.0% |
| TTCAAGCGCATCGAGGCAAC+GGG | + | chr3_2:77009050-77009069 | None:intergenic | 55.0% | |
| GTTCAAGCGCATCGAGGCAA+CGG | + | chr3_2:77009051-77009070 | None:intergenic | 55.0% | |
| TGAGCTGTTCAAGCGCATCG+AGG | + | chr3_2:77009057-77009076 | None:intergenic | 55.0% | |
| CGGGTATGGCACTGTTACTG+AGG | - | chr3_2:77009632-77009651 | Msa0426580:CDS | 55.0% | |
| ! | CTGAGGGTTAGTGTACGCGT+CGG | - | chr3_2:77009649-77009668 | Msa0426580:CDS | 55.0% |
| GCATCCCAGGGAGAACATTC+GGG | - | chr3_2:77010705-77010724 | Msa0426580:intron | 55.0% | |
| GAACGGGGCCTCTGATTCTA+AGG | - | chr3_2:77010792-77010811 | Msa0426580:intron | 55.0% | |
| ! | GCTTTGTTCGACTGTGAGCG+TGG | - | chr3_2:77011438-77011457 | Msa0426580:intron | 55.0% |
| AGTGTGGTCGGTGTGGACAA+AGG | - | chr3_2:77011493-77011512 | Msa0426580:intron | 55.0% | |
| !! | TTCTGCGGCTGCGGTGTTGT+TGG | + | chr3_2:77008792-77008811 | None:intergenic | 60.0% |
| CCTGTTGTGTTCTGCGGCTG+CGG | + | chr3_2:77008801-77008820 | None:intergenic | 60.0% | |
| ! | AGCATCCGCCGCTTTCTTCG+CGG | + | chr3_2:77008993-77009012 | None:intergenic | 60.0% |
| GGGACTATCATCGGTGGAGG+TGG | + | chr3_2:77009017-77009036 | None:intergenic | 60.0% | |
| GCTGGGACTATCATCGGTGG+AGG | + | chr3_2:77009020-77009039 | None:intergenic | 60.0% | |
| ! | GAGGCAACGGGTTTCTTCGC+TGG | + | chr3_2:77009038-77009057 | None:intergenic | 60.0% |
| TACTGTTGAGCCACAGCGGC+TGG | - | chr3_2:77011347-77011366 | Msa0426580:intron | 60.0% | |
| ! | GGTGCTACAGTAGAGCGGTG+TGG | + | chr3_2:77011703-77011722 | None:intergenic | 60.0% |
| CCGCAGCCGCAGAACACAAC+AGG | - | chr3_2:77008798-77008817 | Msa0426580:three_prime_UTR | 65.0% | |
| CGAAGCCGCGAAGAAAGCGG+CGG | - | chr3_2:77008985-77009004 | Msa0426580:three_prime_UTR | 65.0% | |
| CTTTGGTGGAGCAGCAGCGC+TGG | + | chr3_2:77011055-77011074 | None:intergenic | 65.0% | |
| CTCATGACGGCCAGCCGCTG+TGG | + | chr3_2:77011360-77011379 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 77008724 | 77012111 | 77008724 | ID=Msa0426580;Name=Msa0426580 |
| chr3_2 | mRNA | 77008724 | 77012111 | 77008724 | ID=Msa0426580-mRNA-1;Parent=Msa0426580;Name=Msa0426580-mRNA-1;_AED=0.02;_eAED=0.02;_QI=123|1|1|1|1|1|3|497|369 |
| chr3_2 | exon | 77008724 | 77010159 | 77008724 | ID=Msa0426580-mRNA-1:exon:20035;Parent=Msa0426580-mRNA-1 |
| chr3_2 | exon | 77011718 | 77011904 | 77011718 | ID=Msa0426580-mRNA-1:exon:20034;Parent=Msa0426580-mRNA-1 |
| chr3_2 | exon | 77012005 | 77012111 | 77012005 | ID=Msa0426580-mRNA-1:exon:20033;Parent=Msa0426580-mRNA-1 |
| chr3_2 | five_prime_UTR | 77012005 | 77012111 | 77012005 | ID=Msa0426580-mRNA-1:five_prime_utr;Parent=Msa0426580-mRNA-1 |
| chr3_2 | five_prime_UTR | 77011889 | 77011904 | 77011889 | ID=Msa0426580-mRNA-1:five_prime_utr;Parent=Msa0426580-mRNA-1 |
| chr3_2 | CDS | 77011718 | 77011888 | 77011718 | ID=Msa0426580-mRNA-1:cds;Parent=Msa0426580-mRNA-1 |
| chr3_2 | CDS | 77009221 | 77010159 | 77009221 | ID=Msa0426580-mRNA-1:cds;Parent=Msa0426580-mRNA-1 |
| chr3_2 | three_prime_UTR | 77008724 | 77009220 | 77008724 | ID=Msa0426580-mRNA-1:three_prime_utr;Parent=Msa0426580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
