Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262900 | XP_039686739.1 | 83.301 | 509 | 57 | 3 | 1 | 495 | 167 | 661 | 0.0 | 790 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262900 | sp|Q9C6S2|FRL2I_ARATH | 26.455 | 189 | 132 | 4 | 298 | 482 | 157 | 342 | 4.99e-13 | 74.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262900 | A0A072VCF9 | 83.301 | 509 | 57 | 3 | 1 | 495 | 167 | 661 | 0.0 | 790 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0120400 | Msa0262900 | 0.812336 | 4.461630e-51 | -8.615850e-47 |
| Msa0211150 | Msa0262900 | 0.803505 | 3.376247e-49 | -8.615850e-47 |
| Msa0239800 | Msa0262900 | 0.802008 | 6.879292e-49 | -8.615850e-47 |
| Msa0243100 | Msa0262900 | 0.803026 | 4.242873e-49 | -8.615850e-47 |
| Msa0262900 | Msa0317510 | 0.806226 | 9.116616e-50 | -8.615850e-47 |
| Msa0262900 | Msa0357340 | 0.800124 | 1.670070e-48 | -8.615850e-47 |
| Msa0262900 | Msa0495320 | 0.802744 | 4.852310e-49 | -8.615850e-47 |
| Msa0262900 | Msa0896750 | 0.801345 | 9.408062e-49 | -8.615850e-47 |
| Msa0262900 | Msa0909120 | 0.818885 | 1.552176e-52 | -8.615850e-47 |
| Msa0262900 | Msa0909140 | 0.810692 | 1.015806e-50 | -8.615850e-47 |
| Msa0262900 | Msa0967380 | 0.806323 | 8.697902e-50 | -8.615850e-47 |
| Msa0262900 | Msa1082500 | 0.818050 | 2.399792e-52 | -8.615850e-47 |
| Msa0262900 | Msa1131220 | 0.802804 | 4.713825e-49 | -8.615850e-47 |
| Msa0262900 | Msa1242220 | 0.800947 | 1.134822e-48 | -8.615850e-47 |
| Msa0262900 | Msa1283860 | 0.802605 | 5.182334e-49 | -8.615850e-47 |
| Msa0262900 | Msa1353980 | 0.802710 | 4.930246e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262900 | MtrunA17_Chr2g0325621 | 83.301 | 509 | 57 | 3 | 1 | 495 | 167 | 661 | 0.0 | 790 |
| Msa0262900 | MtrunA17_Chr2g0325611 | 58.989 | 534 | 170 | 7 | 10 | 494 | 57 | 590 | 0.0 | 520 |
| Msa0262900 | MtrunA17_Chr6g0471251 | 52.827 | 566 | 169 | 9 | 27 | 495 | 204 | 768 | 1.01e-163 | 482 |
| Msa0262900 | MtrunA17_Chr2g0325661 | 54.991 | 531 | 186 | 10 | 12 | 495 | 353 | 877 | 9.92e-155 | 462 |
| Msa0262900 | MtrunA17_Chr2g0325661 | 46.354 | 192 | 88 | 3 | 31 | 211 | 196 | 383 | 2.86e-28 | 119 |
| Msa0262900 | MtrunA17_Chr2g0325351 | 52.425 | 536 | 162 | 10 | 1 | 494 | 204 | 688 | 3.46e-145 | 432 |
| Msa0262900 | MtrunA17_Chr2g0325361 | 50.092 | 545 | 194 | 10 | 11 | 494 | 550 | 1077 | 2.72e-130 | 404 |
| Msa0262900 | MtrunA17_Chr2g0325361 | 49.609 | 256 | 106 | 3 | 1 | 233 | 159 | 414 | 2.37e-46 | 173 |
| Msa0262900 | MtrunA17_Chr2g0325361 | 36.170 | 235 | 114 | 4 | 8 | 211 | 433 | 662 | 1.03e-20 | 96.3 |
| Msa0262900 | MtrunA17_Chr2g0325361 | 40.107 | 187 | 91 | 3 | 46 | 211 | 336 | 522 | 4.94e-19 | 90.9 |
| Msa0262900 | MtrunA17_Chr2g0325361 | 34.874 | 238 | 112 | 9 | 7 | 213 | 383 | 608 | 1.14e-16 | 83.6 |
| Msa0262900 | MtrunA17_Chr2g0325361 | 36.290 | 248 | 112 | 8 | 2 | 211 | 241 | 480 | 1.29e-16 | 83.2 |
| Msa0262900 | MtrunA17_Chr2g0325361 | 38.503 | 187 | 96 | 5 | 38 | 211 | 356 | 536 | 2.18e-14 | 76.3 |
| Msa0262900 | MtrunA17_Chr2g0280141 | 47.957 | 465 | 199 | 7 | 60 | 494 | 366 | 817 | 9.71e-117 | 362 |
| Msa0262900 | MtrunA17_Chr2g0280141 | 37.615 | 218 | 87 | 5 | 43 | 211 | 191 | 408 | 3.23e-20 | 94.4 |
| Msa0262900 | MtrunA17_Chr2g0280141 | 35.870 | 184 | 86 | 3 | 83 | 238 | 298 | 477 | 1.91e-13 | 73.2 |
| Msa0262900 | MtrunA17_Chr5g0434761 | 65.660 | 265 | 84 | 2 | 237 | 494 | 1 | 265 | 2.00e-114 | 338 |
| Msa0262900 | MtrunA17_Chr2g0325711 | 44.722 | 521 | 230 | 9 | 7 | 476 | 305 | 818 | 6.03e-112 | 350 |
| Msa0262900 | MtrunA17_Chr2g0325711 | 40.769 | 260 | 96 | 6 | 1 | 221 | 191 | 431 | 3.47e-28 | 119 |
| Msa0262900 | MtrunA17_Chr2g0333341 | 50.321 | 467 | 129 | 7 | 1 | 438 | 230 | 622 | 3.05e-110 | 340 |
| Msa0262900 | MtrunA17_Chr2g0325231 | 52.346 | 405 | 130 | 7 | 60 | 410 | 492 | 887 | 4.68e-108 | 341 |
| Msa0262900 | MtrunA17_Chr2g0325231 | 34.296 | 277 | 140 | 4 | 1 | 246 | 195 | 460 | 1.03e-22 | 102 |
| Msa0262900 | MtrunA17_Chr2g0325231 | 34.222 | 225 | 85 | 4 | 48 | 213 | 172 | 392 | 3.71e-16 | 81.6 |
| Msa0262900 | MtrunA17_Chr2g0325231 | 34.921 | 189 | 88 | 3 | 82 | 235 | 377 | 565 | 2.01e-12 | 69.7 |
| Msa0262900 | MtrunA17_Chr2g0325631 | 69.173 | 266 | 75 | 2 | 237 | 495 | 1 | 266 | 5.64e-106 | 317 |
| Msa0262900 | MtrunA17_Chr2g0325811 | 39.219 | 589 | 241 | 8 | 5 | 493 | 259 | 830 | 5.82e-100 | 319 |
| Msa0262900 | MtrunA17_Chr2g0325811 | 43.089 | 246 | 95 | 4 | 1 | 211 | 216 | 451 | 2.50e-34 | 137 |
| Msa0262900 | MtrunA17_Chr2g0325701 | 47.228 | 451 | 169 | 8 | 6 | 392 | 144 | 589 | 1.03e-97 | 306 |
| Msa0262900 | MtrunA17_Chr2g0325861 | 45.220 | 387 | 181 | 4 | 60 | 423 | 472 | 850 | 5.71e-83 | 274 |
| Msa0262900 | MtrunA17_Chr2g0325861 | 62.963 | 189 | 57 | 2 | 1 | 176 | 190 | 378 | 1.51e-53 | 193 |
| Msa0262900 | MtrunA17_Chr5g0416271 | 44.221 | 398 | 163 | 9 | 1 | 392 | 138 | 482 | 4.43e-79 | 255 |
| Msa0262900 | MtrunA17_Chr2g0325321 | 47.772 | 404 | 171 | 7 | 5 | 395 | 385 | 761 | 4.86e-78 | 259 |
| Msa0262900 | MtrunA17_Chr2g0325321 | 39.145 | 304 | 92 | 6 | 1 | 228 | 162 | 448 | 2.45e-34 | 137 |
| Msa0262900 | MtrunA17_Chr2g0325321 | 32.365 | 241 | 111 | 5 | 19 | 211 | 244 | 480 | 1.66e-11 | 67.0 |
| Msa0262900 | MtrunA17_Chr2g0325291 | 59.890 | 182 | 73 | 0 | 269 | 450 | 25 | 206 | 7.27e-61 | 199 |
| Msa0262900 | MtrunA17_Chr2g0332961 | 46.386 | 332 | 140 | 9 | 46 | 365 | 48 | 353 | 9.60e-56 | 189 |
| Msa0262900 | MtrunA17_Chr2g0325721 | 53.817 | 262 | 98 | 4 | 1 | 239 | 182 | 443 | 3.67e-52 | 184 |
| Msa0262900 | MtrunA17_Chr2g0325331 | 60.645 | 155 | 55 | 1 | 237 | 385 | 1 | 155 | 5.89e-47 | 160 |
| Msa0262900 | MtrunA17_Chr2g0325771 | 62.722 | 169 | 47 | 3 | 232 | 392 | 12 | 172 | 1.40e-46 | 160 |
| Msa0262900 | MtrunA17_Chr2g0332951 | 42.857 | 259 | 91 | 6 | 138 | 392 | 2 | 207 | 3.91e-46 | 160 |
| Msa0262900 | MtrunA17_Chr8g0361651 | 33.860 | 443 | 210 | 12 | 60 | 490 | 32 | 403 | 1.98e-45 | 166 |
| Msa0262900 | MtrunA17_Chr2g0325311 | 66.387 | 119 | 37 | 3 | 379 | 494 | 1 | 119 | 3.18e-42 | 146 |
| Msa0262900 | MtrunA17_Chr2g0325281 | 44.747 | 257 | 112 | 3 | 1 | 237 | 162 | 408 | 1.12e-40 | 154 |
| Msa0262900 | MtrunA17_Chr2g0325281 | 37.037 | 216 | 119 | 4 | 19 | 228 | 244 | 448 | 1.64e-19 | 91.7 |
| Msa0262900 | MtrunA17_Chr2g0325281 | 36.475 | 244 | 117 | 7 | 5 | 237 | 385 | 601 | 5.39e-18 | 87.0 |
| Msa0262900 | MtrunA17_Chr3g0140591 | 53.939 | 165 | 69 | 2 | 234 | 392 | 6 | 169 | 1.58e-40 | 144 |
| Msa0262900 | MtrunA17_Chr2g0325651 | 45.291 | 223 | 105 | 3 | 32 | 237 | 165 | 387 | 5.61e-37 | 140 |
| Msa0262900 | MtrunA17_Chr2g0325271 | 62.500 | 104 | 38 | 1 | 392 | 494 | 40 | 143 | 7.50e-36 | 130 |
| Msa0262900 | MtrunA17_Chr4g0024061 | 39.474 | 266 | 118 | 7 | 233 | 490 | 419 | 649 | 9.21e-35 | 138 |
| Msa0262900 | MtrunA17_Chr2g0325241 | 34.202 | 307 | 159 | 7 | 44 | 315 | 124 | 422 | 2.43e-31 | 125 |
| Msa0262900 | MtrunA17_Chr2g0325221 | 44.595 | 222 | 98 | 4 | 1 | 211 | 220 | 427 | 4.56e-31 | 127 |
| Msa0262900 | MtrunA17_Chr2g0325221 | 56.436 | 101 | 44 | 0 | 393 | 493 | 599 | 699 | 4.31e-26 | 112 |
| Msa0262900 | MtrunA17_Chr2g0325221 | 38.028 | 142 | 74 | 2 | 91 | 222 | 451 | 588 | 5.17e-13 | 71.6 |
| Msa0262900 | MtrunA17_Chr2g0325201 | 44.335 | 203 | 88 | 3 | 1 | 192 | 39 | 227 | 1.63e-29 | 115 |
| Msa0262900 | MtrunA17_Chr2g0325691 | 46.237 | 186 | 61 | 4 | 91 | 237 | 544 | 729 | 1.83e-27 | 116 |
| Msa0262900 | MtrunA17_Chr2g0325691 | 39.496 | 238 | 117 | 4 | 1 | 211 | 197 | 434 | 3.57e-24 | 106 |
| Msa0262900 | MtrunA17_Chr2g0325691 | 33.803 | 213 | 101 | 4 | 67 | 239 | 364 | 576 | 2.25e-13 | 72.8 |
| Msa0262900 | MtrunA17_Chr2g0325691 | 34.091 | 220 | 84 | 5 | 46 | 211 | 378 | 590 | 9.22e-12 | 67.8 |
| Msa0262900 | MtrunA17_Chr5g0434741 | 45.062 | 162 | 79 | 1 | 18 | 169 | 137 | 298 | 2.25e-27 | 111 |
| Msa0262900 | MtrunA17_Chr7g0235921 | 70.408 | 98 | 28 | 1 | 309 | 406 | 1 | 97 | 1.47e-26 | 103 |
| Msa0262900 | MtrunA17_Chr2g0325761 | 57.576 | 99 | 42 | 0 | 392 | 490 | 591 | 689 | 5.26e-26 | 112 |
| Msa0262900 | MtrunA17_Chr2g0325761 | 41.206 | 199 | 102 | 3 | 24 | 211 | 184 | 378 | 3.02e-23 | 103 |
| Msa0262900 | MtrunA17_Chr2g0325761 | 43.312 | 157 | 72 | 2 | 82 | 221 | 435 | 591 | 4.51e-21 | 96.7 |
| Msa0262900 | MtrunA17_Chr2g0325761 | 33.610 | 241 | 145 | 5 | 8 | 241 | 291 | 523 | 2.10e-11 | 66.6 |
| Msa0262900 | MtrunA17_Chr2g0325751 | 46.104 | 154 | 61 | 4 | 116 | 247 | 2 | 155 | 5.59e-26 | 103 |
| Msa0262900 | MtrunA17_Chr2g0325641 | 39.524 | 210 | 82 | 4 | 61 | 232 | 109 | 311 | 7.65e-24 | 102 |
| Msa0262900 | MtrunA17_Chr2g0325641 | 41.353 | 133 | 60 | 2 | 93 | 211 | 1 | 129 | 2.66e-13 | 70.9 |
| Msa0262900 | MtrunA17_Chr2g0325641 | 41.007 | 139 | 65 | 2 | 90 | 211 | 54 | 192 | 4.82e-13 | 70.1 |
| Msa0262900 | MtrunA17_Chr7g0235901 | 38.393 | 224 | 103 | 2 | 1 | 207 | 106 | 311 | 2.04e-23 | 100 |
| Msa0262900 | MtrunA17_Chr2g0325261 | 44.156 | 154 | 76 | 1 | 31 | 174 | 150 | 303 | 5.36e-23 | 99.4 |
| Msa0262900 | MtrunA17_Chr2g0325341 | 44.156 | 154 | 76 | 1 | 31 | 174 | 150 | 303 | 5.36e-23 | 99.4 |
| Msa0262900 | MtrunA17_Chr4g0044221 | 34.091 | 308 | 157 | 10 | 40 | 328 | 12 | 292 | 7.47e-22 | 96.3 |
| Msa0262900 | MtrunA17_Chr5g0434751 | 40.678 | 177 | 59 | 3 | 91 | 232 | 111 | 276 | 1.92e-17 | 82.8 |
| Msa0262900 | MtrunA17_Chr5g0434751 | 42.581 | 155 | 78 | 2 | 57 | 211 | 28 | 171 | 1.33e-11 | 65.5 |
| Msa0262900 | MtrunA17_Chr4g0053711 | 25.676 | 444 | 262 | 17 | 97 | 490 | 13 | 438 | 6.56e-16 | 80.5 |
| Msa0262900 | MtrunA17_Chr2g0325791 | 39.521 | 167 | 72 | 4 | 3 | 167 | 17 | 156 | 8.41e-15 | 75.5 |
| Msa0262900 | MtrunA17_Chr2g0325791 | 33.624 | 229 | 109 | 7 | 60 | 285 | 25 | 213 | 2.19e-13 | 71.2 |
| Msa0262900 | MtrunA17_Chr3g0101121 | 28.796 | 191 | 131 | 2 | 302 | 491 | 172 | 358 | 1.40e-13 | 73.2 |
| Msa0262900 | MtrunA17_Chr5g0445281 | 27.128 | 188 | 132 | 2 | 303 | 489 | 198 | 381 | 2.18e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262900 | AT1G31814.1 | 26.455 | 189 | 132 | 4 | 298 | 482 | 157 | 342 | 5.07e-14 | 74.7 |
| Msa0262900 | AT5G48385.1 | 27.742 | 155 | 112 | 0 | 340 | 494 | 302 | 456 | 8.47e-13 | 71.2 |
| Msa0262900 | AT5G16320.1 | 25.664 | 226 | 158 | 5 | 273 | 494 | 142 | 361 | 5.56e-11 | 65.1 |
Find 82 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAATCACTTTGGCATTT+TGG | 0.056247 | 2_2:+61901516 | None:intergenic |
| CTTACACAATCTTCAATATT+TGG | 0.149232 | 2_2:+61902876 | None:intergenic |
| AACTGTTCAACAATGCATTT+TGG | 0.163705 | 2_2:-61901327 | Msa0262900:CDS |
| CTTCTTACACAGTGGATTAA+TGG | 0.178750 | 2_2:+61902965 | None:intergenic |
| TTTCGATGAAGATGAAATTT+TGG | 0.207548 | 2_2:-61902736 | Msa0262900:CDS |
| GATACAATGAACAAATTAAT+TGG | 0.217654 | 2_2:-61904278 | Msa0262900:CDS |
| TGATTCAAAGCTGAATAAAT+TGG | 0.240384 | 2_2:-61903889 | Msa0262900:CDS |
| GAAGATTCTTTGGCAGTTCT+TGG | 0.256037 | 2_2:-61902798 | Msa0262900:CDS |
| AGAGAATAGTGAAGATTCTT+TGG | 0.258575 | 2_2:-61902808 | Msa0262900:CDS |
| AGATCAAGAAATTGCTAGTT+TGG | 0.267521 | 2_2:-61901351 | Msa0262900:CDS |
| TGTATCAAGCTCTGTCTCTT+TGG | 0.271127 | 2_2:+61904295 | None:intergenic |
| TTCTTACACAGTGGATTAAT+GGG | 0.334842 | 2_2:+61902966 | None:intergenic |
| ACAGTCTGAGGTTCTTAAAA+AGG | 0.339045 | 2_2:-61901294 | Msa0262900:CDS |
| GTTCCTCTTCCTTCCTTTCA+CGG | 0.342021 | 2_2:+61904366 | None:intergenic |
| ACTTCATCAAGTCATTTATA+AGG | 0.348967 | 2_2:-61904390 | Msa0262900:CDS |
| TATTTGATGGAGAACTTGAT+TGG | 0.352613 | 2_2:-61904488 | None:intergenic |
| TGAATGTACTTTGGAACTTA+AGG | 0.359768 | 2_2:-61904318 | Msa0262900:CDS |
| GAACTTGGAAGGACGAATAA+AGG | 0.361370 | 2_2:-61904138 | Msa0262900:CDS |
| AATTTATTCAGCTTTGAATC+AGG | 0.368146 | 2_2:+61903891 | None:intergenic |
| CAGCTTTGAATCAGGATCCT+TGG | 0.431352 | 2_2:+61903899 | None:intergenic |
| ACTAGCAATTTCTTGATCTC+TGG | 0.437247 | 2_2:+61901355 | None:intergenic |
| AGCAATTTGTTGTAGCTGTT+AGG | 0.445220 | 2_2:-61901601 | Msa0262900:CDS |
| AACCAACTCCGTTGAAATCA+AGG | 0.446102 | 2_2:-61901477 | Msa0262900:intron |
| GAAGAAGCAACTTGAGGGTC+AGG | 0.452602 | 2_2:-61904186 | Msa0262900:CDS |
| TCGTGCTCAAATGAAGGAAT+TGG | 0.453915 | 2_2:-61904216 | Msa0262900:CDS |
| CTTGAGCTACAAGCACATAA+AGG | 0.454488 | 2_2:-61901254 | Msa0262900:CDS |
| AACCTTGATTTCAACGGAGT+TGG | 0.457408 | 2_2:+61901475 | None:intergenic |
| GAAGGAGTTTCAATTAAAAG+AGG | 0.459023 | 2_2:-61904078 | Msa0262900:CDS |
| ATTGACGGGGAGCAAGAATC+TGG | 0.459629 | 2_2:-61903807 | Msa0262900:intron |
| CATTAAGAAAATATATTGAC+GGG | 0.467837 | 2_2:-61903821 | Msa0262900:CDS |
| GATTGTTTACCTGTCAACTT+AGG | 0.480874 | 2_2:+61903849 | None:intergenic |
| ATGGAGATGTTTCAGACCCT+GGG | 0.487921 | 2_2:-61902678 | Msa0262900:CDS |
| TAAATTGGATGGACAAATGA+AGG | 0.494056 | 2_2:-61903874 | Msa0262900:CDS |
| CATTAATCCACTGTGTAAGA+AGG | 0.495309 | 2_2:-61902964 | Msa0262900:CDS |
| TTAAAAGAGGAGGAATTTGA+AGG | 0.496577 | 2_2:-61904065 | Msa0262900:CDS |
| GCAATTCGAGGGACAAATGA+AGG | 0.498239 | 2_2:-61904096 | Msa0262900:CDS |
| TATGGAGATGTTTCAGACCC+TGG | 0.508505 | 2_2:-61902679 | Msa0262900:CDS |
| ATATGCAGTTGCATCTTACA+TGG | 0.508808 | 2_2:-61903123 | Msa0262900:intron |
| GTTCAGTTGTGCATATAACT+TGG | 0.510470 | 2_2:-61901579 | Msa0262900:CDS |
| TGAGTCAGAGAAGAAGAACT+TGG | 0.512987 | 2_2:-61904153 | Msa0262900:CDS |
| TGAAGAACGTCCGAAAGAAA+AGG | 0.517838 | 2_2:-61903964 | Msa0262900:CDS |
| CGATTAAGTCATACCATTGG+TGG | 0.525094 | 2_2:-61903095 | Msa0262900:CDS |
| ATGAAGGAGCCTAAGTTGAC+AGG | 0.531788 | 2_2:-61903858 | Msa0262900:CDS |
| GGAGTTTCAATTAAAAGAGG+AGG | 0.531791 | 2_2:-61904075 | Msa0262900:CDS |
| ACTGTTCTCACAAATCACTT+TGG | 0.532391 | 2_2:+61901508 | None:intergenic |
| TCAATGAAGAAGCAACTTGA+GGG | 0.533149 | 2_2:-61904191 | Msa0262900:CDS |
| GAATGGTCGTGCTCAAATGA+AGG | 0.536817 | 2_2:-61904222 | Msa0262900:CDS |
| TCAAAGCTGAATAAATTGGA+TGG | 0.541007 | 2_2:-61903885 | Msa0262900:CDS |
| GCAGTTTGAAAGACAAGCCA+AGG | 0.542581 | 2_2:-61903916 | Msa0262900:CDS |
| TGGTGGAACAAGTTTGCAGT+TGG | 0.544547 | 2_2:-61903078 | Msa0262900:CDS |
| AAACTTTATTTGCAAAACCC+AGG | 0.546446 | 2_2:+61902661 | None:intergenic |
| GGAGCTCGAATCAAAGAAGA+AGG | 0.548520 | 2_2:-61903991 | Msa0262900:CDS |
| AACTTTATTTGCAAAACCCA+GGG | 0.549647 | 2_2:+61902662 | None:intergenic |
| TTAGAGTCTGAAAAGGAGAA+TGG | 0.552697 | 2_2:-61904239 | Msa0262900:CDS |
| AAGAAAAGGTGAATGAGCTC+AGG | 0.557785 | 2_2:-61903950 | Msa0262900:CDS |
| GGAAATGAAATCAAAGGTGG+AGG | 0.559109 | 2_2:-61904033 | Msa0262900:CDS |
| GCATTAAGAAAATATATTGA+CGG | 0.559853 | 2_2:-61903822 | Msa0262900:CDS |
| GATAGAACTTAATCAAGTCA+AGG | 0.560272 | 2_2:-61904435 | Msa0262900:CDS |
| ATCAAGAGAGAAGCAATTCG+AGG | 0.565114 | 2_2:-61904108 | Msa0262900:CDS |
| TGCTCAGCACAAGATAGCTA+TGG | 0.565711 | 2_2:-61902697 | Msa0262900:CDS |
| CTGCAAACTTGTTCCACCAA+TGG | 0.566622 | 2_2:+61903082 | None:intergenic |
| GGATTGCAAACTACAGTCTG+AGG | 0.567148 | 2_2:-61901306 | Msa0262900:CDS |
| TTATAAGGACCGTGAAAGGA+AGG | 0.569203 | 2_2:-61904375 | Msa0262900:CDS |
| GGAACTCGAAGATCAAGTTA+AGG | 0.570629 | 2_2:-61904012 | Msa0262900:CDS |
| GGAATTTGAAGGCAGACTGA+AGG | 0.574570 | 2_2:-61904054 | Msa0262900:CDS |
| GTCAATGAAGAAGCAACTTG+AGG | 0.577482 | 2_2:-61904192 | Msa0262900:CDS |
| GATCGATTAAGTCATACCAT+TGG | 0.581766 | 2_2:-61903098 | Msa0262900:CDS |
| ATAGAACTTAATCAAGTCAA+GGG | 0.583347 | 2_2:-61904434 | Msa0262900:CDS |
| CAGAAGAACCTTGATTTCAA+CGG | 0.584171 | 2_2:+61901469 | None:intergenic |
| GGACCGTGAAAGGAAGGAAG+AGG | 0.585661 | 2_2:-61904369 | Msa0262900:CDS |
| TCAGAGAAGAAGAACTTGGA+AGG | 0.587930 | 2_2:-61904149 | Msa0262900:CDS |
| ATTAATCCACTGTGTAAGAA+GGG | 0.589689 | 2_2:-61902963 | Msa0262900:CDS |
| TCATTTATAAGGACCGTGAA+AGG | 0.593458 | 2_2:-61904379 | Msa0262900:CDS |
| ACTGAAGGAAATGAAATCAA+AGG | 0.604087 | 2_2:-61904039 | Msa0262900:CDS |
| TTGTTGAGAATCTTATCAAG+AGG | 0.606243 | 2_2:-61901625 | Msa0262900:CDS |
| TCAAGAGAGAAGCAATTCGA+GGG | 0.611920 | 2_2:-61904107 | Msa0262900:CDS |
| AGAGCGCAAGATAGAGCTCA+AGG | 0.612522 | 2_2:-61904465 | Msa0262900:CDS |
| GAAGGAAATGAAATCAAAGG+TGG | 0.617855 | 2_2:-61904036 | Msa0262900:CDS |
| TTGTCTCCCTTCTTACACAG+TGG | 0.649739 | 2_2:+61902957 | None:intergenic |
| ACTGTTGCAGTTGAGTCACA+TGG | 0.677260 | 2_2:-61903041 | Msa0262900:CDS |
| GTTGTTCTAGTAGAAAGATG+CGG | 0.701348 | 2_2:+61902913 | None:intergenic |
| ATTAAGAAAATATATTGACG+GGG | 0.735655 | 2_2:-61903820 | Msa0262900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGGCTTAATTATAATATTA+TGG | - | chr2_2:61902214-61902233 | Msa0262900:intron | 15.0% |
| !! | TATCAAAACATAAAGATAAA+AGG | + | chr2_2:61903136-61903155 | None:intergenic | 15.0% |
| !!! | AGTACATTCATCAATTTTTT+GGG | + | chr2_2:61901401-61901420 | None:intergenic | 20.0% |
| !!! | AAGTACATTCATCAATTTTT+TGG | + | chr2_2:61901402-61901421 | None:intergenic | 20.0% |
| !! | AAAAATTGATGAATGTACTT+TGG | - | chr2_2:61901402-61901421 | Msa0262900:intron | 20.0% |
| !! | GATACAATGAACAAATTAAT+TGG | - | chr2_2:61901451-61901470 | Msa0262900:intron | 20.0% |
| !! | GCATTAAGAAAATATATTGA+CGG | - | chr2_2:61901907-61901926 | Msa0262900:intron | 20.0% |
| !! | CATTAAGAAAATATATTGAC+GGG | - | chr2_2:61901908-61901927 | Msa0262900:intron | 20.0% |
| !! | ATTAAGAAAATATATTGACG+GGG | - | chr2_2:61901909-61901928 | Msa0262900:intron | 20.0% |
| !!! | TTTTTCAAGTATATTGCAAA+TGG | - | chr2_2:61902276-61902295 | Msa0262900:intron | 20.0% |
| !!! | GATTTCATTGATTAATAAAC+AGG | + | chr2_2:61902369-61902388 | None:intergenic | 20.0% |
| !!! | TTAACCCATTTTATCATTTA+TGG | - | chr2_2:61903299-61903318 | Msa0262900:intron | 20.0% |
| !!! | TGTTTTGATATGAATAAATG+TGG | + | chr2_2:61903492-61903511 | None:intergenic | 20.0% |
| !!! | ATGAATCCTTTTAAGAAAAT+AGG | - | chr2_2:61903671-61903690 | Msa0262900:intron | 20.0% |
| !!! | AGTTATCCTATTTTCTTAAA+AGG | + | chr2_2:61903680-61903699 | None:intergenic | 20.0% |
| !! | AAGATTATGATATTAGTTGT+TGG | - | chr2_2:61903740-61903759 | Msa0262900:intron | 20.0% |
| !! | AAATTGAACTGATATCTAAT+TGG | - | chr2_2:61903767-61903786 | Msa0262900:intron | 20.0% |
| !!! | TGTCTCTTCTATTTTTTAAA+TGG | - | chr2_2:61903981-61904000 | Msa0262900:CDS | 20.0% |
| !!! | AGATTTTTGTTGTTGTTAAT+TGG | - | chr2_2:61904040-61904059 | Msa0262900:CDS | 20.0% |
| ! | ATAGAACTTAATCAAGTCAA+GGG | - | chr2_2:61901295-61901314 | Msa0262900:CDS | 25.0% |
| ! | ACTTCATCAAGTCATTTATA+AGG | - | chr2_2:61901339-61901358 | Msa0262900:CDS | 25.0% |
| ! | AGAAAAATTAGAGTCTGAAA+AGG | - | chr2_2:61901483-61901502 | Msa0262900:CDS | 25.0% |
| !!! | AATTTATTCAGCTTTGAATC+AGG | + | chr2_2:61901841-61901860 | None:intergenic | 25.0% |
| ! | TGATTCAAAGCTGAATAAAT+TGG | - | chr2_2:61901840-61901859 | Msa0262900:intron | 25.0% |
| ! | GAGATTCATAAAATGTTCAA+GGG | + | chr2_2:61902155-61902174 | None:intergenic | 25.0% |
| ! | AGAGATTCATAAAATGTTCA+AGG | + | chr2_2:61902156-61902175 | None:intergenic | 25.0% |
| ! | TCTCCTAGATTGAAATATAT+GGG | + | chr2_2:61902471-61902490 | None:intergenic | 25.0% |
| ! | ATCTCCTAGATTGAAATATA+TGG | + | chr2_2:61902472-61902491 | None:intergenic | 25.0% |
| ! | CTTACACAATCTTCAATATT+TGG | + | chr2_2:61902856-61902875 | None:intergenic | 25.0% |
| !! | TTTCGATGAAGATGAAATTT+TGG | - | chr2_2:61902993-61903012 | Msa0262900:CDS | 25.0% |
| ! | TCCACCATAAATGATAAAAT+GGG | + | chr2_2:61903306-61903325 | None:intergenic | 25.0% |
| ! | ATCCACCATAAATGATAAAA+TGG | + | chr2_2:61903307-61903326 | None:intergenic | 25.0% |
| !!! | TACTTTTTTGAGAGAAACAT+GGG | + | chr2_2:61903427-61903446 | None:intergenic | 25.0% |
| !!! | TTACTTTTTTGAGAGAAACA+TGG | + | chr2_2:61903428-61903447 | None:intergenic | 25.0% |
| !!! | AAATGCCATTTTTCAATTTG+TGG | - | chr2_2:61903613-61903632 | Msa0262900:intron | 25.0% |
| ! | TAAGAAAATAGGATAACTCT+TGG | - | chr2_2:61903682-61903701 | Msa0262900:intron | 25.0% |
| ! | ATTACTATGTATTTGAACTC+AGG | - | chr2_2:61904345-61904364 | Msa0262900:CDS | 25.0% |
| GATAGAACTTAATCAAGTCA+AGG | - | chr2_2:61901294-61901313 | Msa0262900:CDS | 30.0% | |
| !! | TGAATGTACTTTGGAACTTA+AGG | - | chr2_2:61901411-61901430 | Msa0262900:intron | 30.0% |
| GAAGGAGTTTCAATTAAAAG+AGG | - | chr2_2:61901651-61901670 | Msa0262900:intron | 30.0% | |
| TTAAAAGAGGAGGAATTTGA+AGG | - | chr2_2:61901664-61901683 | Msa0262900:intron | 30.0% | |
| ACTGAAGGAAATGAAATCAA+AGG | - | chr2_2:61901690-61901709 | Msa0262900:intron | 30.0% | |
| TCAAAGCTGAATAAATTGGA+TGG | - | chr2_2:61901844-61901863 | Msa0262900:intron | 30.0% | |
| TAAATTGGATGGACAAATGA+AGG | - | chr2_2:61901855-61901874 | Msa0262900:intron | 30.0% | |
| !!! | CTCTTGCGTTTTTTTATTCA+TGG | - | chr2_2:61902189-61902208 | Msa0262900:intron | 30.0% |
| !!! | CGTTTTTTTATTCATGGCTA+AGG | - | chr2_2:61902195-61902214 | Msa0262900:intron | 30.0% |
| AAGTATATTGCAAATGGTGT+AGG | - | chr2_2:61902282-61902301 | Msa0262900:intron | 30.0% | |
| TCACCCATATATTTCAATCT+AGG | - | chr2_2:61902465-61902484 | Msa0262900:intron | 30.0% | |
| ! | CAGTAAATGATAGTGACAAT+AGG | + | chr2_2:61902543-61902562 | None:intergenic | 30.0% |
| TGACGCTTCTATAAATATGA+GGG | - | chr2_2:61902561-61902580 | Msa0262900:intron | 30.0% | |
| !! | TTCTTACACAGTGGATTAAT+GGG | + | chr2_2:61902766-61902785 | None:intergenic | 30.0% |
| ATTAATCCACTGTGTAAGAA+GGG | - | chr2_2:61902766-61902785 | Msa0262900:CDS | 30.0% | |
| AGAGAATAGTGAAGATTCTT+TGG | - | chr2_2:61902921-61902940 | Msa0262900:CDS | 30.0% | |
| !!! | AATTTTGGAGCTTTTTGCAT+TGG | - | chr2_2:61903008-61903027 | Msa0262900:CDS | 30.0% |
| ! | AACTTTATTTGCAAAACCCA+GGG | + | chr2_2:61903070-61903089 | None:intergenic | 30.0% |
| ! | AAACTTTATTTGCAAAACCC+AGG | + | chr2_2:61903071-61903090 | None:intergenic | 30.0% |
| ! | GGTTTTGCAAATAAAGTTTC+TGG | - | chr2_2:61903072-61903091 | Msa0262900:CDS | 30.0% |
| ATGTTAATTCAGAACTGCTT+TGG | - | chr2_2:61903096-61903115 | Msa0262900:CDS | 30.0% | |
| ATCCTAACTGTAGATAAGAA+TGG | + | chr2_2:61903216-61903235 | None:intergenic | 30.0% | |
| TAAAAAATCCACCCTATAGT+GGG | + | chr2_2:61903282-61903301 | None:intergenic | 30.0% | |
| TTAAAAAATCCACCCTATAG+TGG | + | chr2_2:61903283-61903302 | None:intergenic | 30.0% | |
| ! | ACCCATTTTATCATTTATGG+TGG | - | chr2_2:61903302-61903321 | Msa0262900:intron | 30.0% |
| ! | GTCTAGAATAATAGGTGATT+TGG | + | chr2_2:61903526-61903545 | None:intergenic | 30.0% |
| ! | ACTGACATGTCTAGAATAAT+AGG | + | chr2_2:61903534-61903553 | None:intergenic | 30.0% |
| TTGCTCCACAAATTGAAAAA+TGG | + | chr2_2:61903621-61903640 | None:intergenic | 30.0% | |
| TTCAATTTGTGGAGCAAAAA+AGG | - | chr2_2:61903624-61903643 | Msa0262900:intron | 30.0% | |
| TCAATTTGTGGAGCAAAAAA+GGG | - | chr2_2:61903625-61903644 | Msa0262900:intron | 30.0% | |
| AAGGGATCTGTTAAAGAAAA+TGG | - | chr2_2:61903643-61903662 | Msa0262900:intron | 30.0% | |
| TGTCAATTCTCTCTAAACAA+AGG | + | chr2_2:61903821-61903840 | None:intergenic | 30.0% | |
| TTTAGAGAGAATTGACATCT+TGG | - | chr2_2:61903824-61903843 | Msa0262900:CDS | 30.0% | |
| CAACAAAAATCTAAGCAGAT+TGG | + | chr2_2:61904032-61904051 | None:intergenic | 30.0% | |
| ! | TACATATTTTCTGCTTGTTC+TGG | - | chr2_2:61904063-61904082 | Msa0262900:CDS | 30.0% |
| TTGTTGAGAATCTTATCAAG+AGG | - | chr2_2:61904104-61904123 | Msa0262900:CDS | 30.0% | |
| !! | GGTTCTTCTGTTTTTCTTAT+TGG | - | chr2_2:61904273-61904292 | Msa0262900:CDS | 30.0% |
| ATTCATAACCAGTGTGAAAA+TGG | + | chr2_2:61904320-61904339 | None:intergenic | 30.0% | |
| ATGTATTTGAACTCAGGATA+AGG | - | chr2_2:61904351-61904370 | Msa0262900:CDS | 30.0% | |
| AGATCAAGAAATTGCTAGTT+TGG | - | chr2_2:61904378-61904397 | Msa0262900:CDS | 30.0% | |
| ! | AACTGTTCAACAATGCATTT+TGG | - | chr2_2:61904402-61904421 | Msa0262900:CDS | 30.0% |
| TCATTTATAAGGACCGTGAA+AGG | - | chr2_2:61901350-61901369 | Msa0262900:CDS | 35.0% | |
| TTAGAGTCTGAAAAGGAGAA+TGG | - | chr2_2:61901490-61901509 | Msa0262900:CDS | 35.0% | |
| TCAATGAAGAAGCAACTTGA+GGG | - | chr2_2:61901538-61901557 | Msa0262900:CDS | 35.0% | |
| GGAGTTTCAATTAAAAGAGG+AGG | - | chr2_2:61901654-61901673 | Msa0262900:intron | 35.0% | |
| GAAGGAAATGAAATCAAAGG+TGG | - | chr2_2:61901693-61901712 | Msa0262900:intron | 35.0% | |
| ! | AGCTCATTCACCTTTTCTTT+CGG | + | chr2_2:61901778-61901797 | None:intergenic | 35.0% |
| GATTGTTTACCTGTCAACTT+AGG | + | chr2_2:61901883-61901902 | None:intergenic | 35.0% | |
| CTAGAAACAGTTGCACTAAT+AGG | + | chr2_2:61902345-61902364 | None:intergenic | 35.0% | |
| ATGAAATCAAACACTGTCTC+TGG | - | chr2_2:61902381-61902400 | Msa0262900:intron | 35.0% | |
| CTGACGCTTCTATAAATATG+AGG | - | chr2_2:61902560-61902579 | Msa0262900:intron | 35.0% | |
| ATATGCAGTTGCATCTTACA+TGG | - | chr2_2:61902606-61902625 | Msa0262900:intron | 35.0% | |
| GATCGATTAAGTCATACCAT+TGG | - | chr2_2:61902631-61902650 | Msa0262900:intron | 35.0% | |
| !! | CTTCTTACACAGTGGATTAA+TGG | + | chr2_2:61902767-61902786 | None:intergenic | 35.0% |
| CATTAATCCACTGTGTAAGA+AGG | - | chr2_2:61902765-61902784 | Msa0262900:CDS | 35.0% | |
| GTTGTTCTAGTAGAAAGATG+CGG | + | chr2_2:61902819-61902838 | None:intergenic | 35.0% | |
| AATGGCATGGAAAGTAACAA+TGG | + | chr2_2:61903198-61903217 | None:intergenic | 35.0% | |
| AACTGTAGATAAGAATGGCA+TGG | + | chr2_2:61903211-61903230 | None:intergenic | 35.0% | |
| TGCCATTCTTATCTACAGTT+AGG | - | chr2_2:61903211-61903230 | Msa0262900:intron | 35.0% | |
| TATCTACAGTTAGGATGAGA+TGG | - | chr2_2:61903220-61903239 | Msa0262900:intron | 35.0% | |
| TTATGGCCATTCATGATCAA+AGG | - | chr2_2:61903243-61903262 | Msa0262900:intron | 35.0% | |
| !! | TTATGGTGGATGTAGTCTTT+AGG | - | chr2_2:61903316-61903335 | Msa0262900:intron | 35.0% |
| AAAGTAGGGAAGGAAAACAT+GGG | + | chr2_2:61903460-61903479 | None:intergenic | 35.0% | |
| AAAAGTAGGGAAGGAAAACA+TGG | + | chr2_2:61903461-61903480 | None:intergenic | 35.0% | |
| !! | GTTTTCCTTCCCTACTTTTA+TGG | - | chr2_2:61903462-61903481 | Msa0262900:intron | 35.0% |
| TGTGGTGATCCATAAAAGTA+GGG | + | chr2_2:61903474-61903493 | None:intergenic | 35.0% | |
| ATGTGGTGATCCATAAAAGT+AGG | + | chr2_2:61903475-61903494 | None:intergenic | 35.0% | |
| !! | TGACATCTTGGTGTTAATCT+TGG | - | chr2_2:61903836-61903855 | Msa0262900:CDS | 35.0% |
| GATTCTCAACAAAATCTGCA+AGG | + | chr2_2:61904096-61904115 | None:intergenic | 35.0% | |
| !! | AGCAATTTGTTGTAGCTGTT+AGG | - | chr2_2:61904128-61904147 | Msa0262900:CDS | 35.0% |
| GTTCAGTTGTGCATATAACT+TGG | - | chr2_2:61904150-61904169 | Msa0262900:CDS | 35.0% | |
| ! | CACAAATCACTTTGGCATTT+TGG | + | chr2_2:61904216-61904235 | None:intergenic | 35.0% |
| ACTGTTCTCACAAATCACTT+TGG | + | chr2_2:61904224-61904243 | None:intergenic | 35.0% | |
| CAGAAGAACCTTGATTTCAA+CGG | + | chr2_2:61904263-61904282 | None:intergenic | 35.0% | |
| ! | CAAACATTCCATTTTCACAC+TGG | - | chr2_2:61904309-61904328 | Msa0262900:CDS | 35.0% |
| ACTAGCAATTTCTTGATCTC+TGG | + | chr2_2:61904377-61904396 | None:intergenic | 35.0% | |
| ! | ACAGTCTGAGGTTCTTAAAA+AGG | - | chr2_2:61904435-61904454 | Msa0262900:CDS | 35.0% |
| GAGGTTCTTAAAAAGGAGAT+TGG | - | chr2_2:61904442-61904461 | Msa0262900:CDS | 35.0% | |
| TTATAAGGACCGTGAAAGGA+AGG | - | chr2_2:61901354-61901373 | Msa0262900:CDS | 40.0% | |
| TGTATCAAGCTCTGTCTCTT+TGG | + | chr2_2:61901437-61901456 | None:intergenic | 40.0% | |
| TCGTGCTCAAATGAAGGAAT+TGG | - | chr2_2:61901513-61901532 | Msa0262900:CDS | 40.0% | |
| GTCAATGAAGAAGCAACTTG+AGG | - | chr2_2:61901537-61901556 | Msa0262900:CDS | 40.0% | |
| TGAGTCAGAGAAGAAGAACT+TGG | - | chr2_2:61901576-61901595 | Msa0262900:CDS | 40.0% | |
| TCAGAGAAGAAGAACTTGGA+AGG | - | chr2_2:61901580-61901599 | Msa0262900:CDS | 40.0% | |
| GAACTTGGAAGGACGAATAA+AGG | - | chr2_2:61901591-61901610 | Msa0262900:CDS | 40.0% | |
| ATCAAGAGAGAAGCAATTCG+AGG | - | chr2_2:61901621-61901640 | Msa0262900:CDS | 40.0% | |
| TCAAGAGAGAAGCAATTCGA+GGG | - | chr2_2:61901622-61901641 | Msa0262900:CDS | 40.0% | |
| GGAAATGAAATCAAAGGTGG+AGG | - | chr2_2:61901696-61901715 | Msa0262900:intron | 40.0% | |
| GGAACTCGAAGATCAAGTTA+AGG | - | chr2_2:61901717-61901736 | Msa0262900:intron | 40.0% | |
| TGAAGAACGTCCGAAAGAAA+AGG | - | chr2_2:61901765-61901784 | Msa0262900:intron | 40.0% | |
| AAGAAAAGGTGAATGAGCTC+AGG | - | chr2_2:61901779-61901798 | Msa0262900:intron | 40.0% | |
| CGTGTGTGTGATATGAAAAC+TGG | + | chr2_2:61902102-61902121 | None:intergenic | 40.0% | |
| AACCTCCTGACAAACATTGA+GGG | - | chr2_2:61902308-61902327 | Msa0262900:intron | 40.0% | |
| TGTCTCTGGTGATTCAGTTA+AGG | - | chr2_2:61902395-61902414 | Msa0262900:intron | 40.0% | |
| CGATTAAGTCATACCATTGG+TGG | - | chr2_2:61902634-61902653 | Msa0262900:intron | 40.0% | |
| GAAGATTCTTTGGCAGTTCT+TGG | - | chr2_2:61902931-61902950 | Msa0262900:CDS | 40.0% | |
| CAGTTAGGATGAGATGGTTA+TGG | - | chr2_2:61903226-61903245 | Msa0262900:intron | 40.0% | |
| GTGATCCATAAAAGTAGGGA+AGG | + | chr2_2:61903470-61903489 | None:intergenic | 40.0% | |
| ACAACCAAGAGAATGTCAGT+TGG | - | chr2_2:61903565-61903584 | Msa0262900:intron | 40.0% | |
| AATGCCAACTGACATTCTCT+TGG | + | chr2_2:61903572-61903591 | None:intergenic | 40.0% | |
| TAAACAAAGGCGAGAACTGT+GGG | + | chr2_2:61903808-61903827 | None:intergenic | 40.0% | |
| AACCAACTCCGTTGAAATCA+AGG | - | chr2_2:61904252-61904271 | Msa0262900:CDS | 40.0% | |
| AACCTTGATTTCAACGGAGT+TGG | + | chr2_2:61904257-61904276 | None:intergenic | 40.0% | |
| CTTGAGCTACAAGCACATAA+AGG | - | chr2_2:61904475-61904494 | Msa0262900:CDS | 40.0% | |
| GTTCCTCTTCCTTCCTTTCA+CGG | + | chr2_2:61901366-61901385 | None:intergenic | 45.0% | |
| GAATGGTCGTGCTCAAATGA+AGG | - | chr2_2:61901507-61901526 | Msa0262900:CDS | 45.0% | |
| GCAATTCGAGGGACAAATGA+AGG | - | chr2_2:61901633-61901652 | Msa0262900:intron | 45.0% | |
| GGAATTTGAAGGCAGACTGA+AGG | - | chr2_2:61901675-61901694 | Msa0262900:intron | 45.0% | |
| GGAGCTCGAATCAAAGAAGA+AGG | - | chr2_2:61901738-61901757 | Msa0262900:intron | 45.0% | |
| GCAGTTTGAAAGACAAGCCA+AGG | - | chr2_2:61901813-61901832 | Msa0262900:intron | 45.0% | |
| !! | CAGCTTTGAATCAGGATCCT+TGG | + | chr2_2:61901833-61901852 | None:intergenic | 45.0% |
| ! | ATGAAGGAGCCTAAGTTGAC+AGG | - | chr2_2:61901871-61901890 | Msa0262900:intron | 45.0% |
| CAACCTCCTGACAAACATTG+AGG | - | chr2_2:61902307-61902326 | Msa0262900:intron | 45.0% | |
| ACCTCCTGACAAACATTGAG+GGG | - | chr2_2:61902309-61902328 | Msa0262900:intron | 45.0% | |
| AATGCCCCTCAATGTTTGTC+AGG | + | chr2_2:61902316-61902335 | None:intergenic | 45.0% | |
| ! | CTGCAAACTTGTTCCACCAA+TGG | + | chr2_2:61902650-61902669 | None:intergenic | 45.0% |
| TGGTGGAACAAGTTTGCAGT+TGG | - | chr2_2:61902651-61902670 | Msa0262900:intron | 45.0% | |
| ACTGTTGCAGTTGAGTCACA+TGG | - | chr2_2:61902688-61902707 | Msa0262900:CDS | 45.0% | |
| TTGTCTCCCTTCTTACACAG+TGG | + | chr2_2:61902775-61902794 | None:intergenic | 45.0% | |
| TGCTCAGCACAAGATAGCTA+TGG | - | chr2_2:61903032-61903051 | Msa0262900:CDS | 45.0% | |
| TATGGAGATGTTTCAGACCC+TGG | - | chr2_2:61903050-61903069 | Msa0262900:CDS | 45.0% | |
| ATGGAGATGTTTCAGACCCT+GGG | - | chr2_2:61903051-61903070 | Msa0262900:CDS | 45.0% | |
| TCGGCACCTTTGATCATGAA+TGG | + | chr2_2:61903252-61903271 | None:intergenic | 45.0% | |
| !! | CCCTATAGTGGGCAAGTAAT+CGG | + | chr2_2:61903271-61903290 | None:intergenic | 45.0% |
| CCGATTACTTGCCCACTATA+GGG | - | chr2_2:61903268-61903287 | Msa0262900:intron | 45.0% | |
| ATTACTTGCCCACTATAGGG+TGG | - | chr2_2:61903271-61903290 | Msa0262900:intron | 45.0% | |
| AAACAAAGGCGAGAACTGTG+GGG | + | chr2_2:61903807-61903826 | None:intergenic | 45.0% | |
| CTAAACAAAGGCGAGAACTG+TGG | + | chr2_2:61903809-61903828 | None:intergenic | 45.0% | |
| GGATTGCAAACTACAGTCTG+AGG | - | chr2_2:61904423-61904442 | Msa0262900:CDS | 45.0% | |
| AGAGCGCAAGATAGAGCTCA+AGG | - | chr2_2:61901264-61901283 | Msa0262900:CDS | 50.0% | |
| GAAGAAGCAACTTGAGGGTC+AGG | - | chr2_2:61901543-61901562 | Msa0262900:CDS | 50.0% | |
| ATTGACGGGGAGCAAGAATC+TGG | - | chr2_2:61901922-61901941 | Msa0262900:intron | 50.0% | |
| GCCGATTACTTGCCCACTAT+AGG | - | chr2_2:61903267-61903286 | Msa0262900:intron | 50.0% | |
| AACAAAGGCGAGAACTGTGG+GGG | + | chr2_2:61903806-61903825 | None:intergenic | 50.0% | |
| GGACCGTGAAAGGAAGGAAG+AGG | - | chr2_2:61901360-61901379 | Msa0262900:CDS | 55.0% | |
| GCCCCTCAATGTTTGTCAGG+AGG | + | chr2_2:61902313-61902332 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 61901247 | 61904504 | 61901247 | ID=Msa0262900;Name=Msa0262900 |
| chr2_2 | mRNA | 61901247 | 61904504 | 61901247 | ID=Msa0262900-mRNA-1;Parent=Msa0262900;Name=Msa0262900-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|4|0|495 |
| chr2_2 | exon | 61903808 | 61904504 | 61903808 | ID=Msa0262900-mRNA-1:exon:19072;Parent=Msa0262900-mRNA-1 |
| chr2_2 | exon | 61902658 | 61903137 | 61902658 | ID=Msa0262900-mRNA-1:exon:19071;Parent=Msa0262900-mRNA-1 |
| chr2_2 | exon | 61901478 | 61901650 | 61901478 | ID=Msa0262900-mRNA-1:exon:19070;Parent=Msa0262900-mRNA-1 |
| chr2_2 | exon | 61901247 | 61901384 | 61901247 | ID=Msa0262900-mRNA-1:exon:19069;Parent=Msa0262900-mRNA-1 |
| chr2_2 | CDS | 61903808 | 61904504 | 61903808 | ID=Msa0262900-mRNA-1:cds;Parent=Msa0262900-mRNA-1 |
| chr2_2 | CDS | 61902658 | 61903137 | 61902658 | ID=Msa0262900-mRNA-1:cds;Parent=Msa0262900-mRNA-1 |
| chr2_2 | CDS | 61901478 | 61901650 | 61901478 | ID=Msa0262900-mRNA-1:cds;Parent=Msa0262900-mRNA-1 |
| chr2_2 | CDS | 61901247 | 61901384 | 61901247 | ID=Msa0262900-mRNA-1:cds;Parent=Msa0262900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
