Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0272550 | XP_013462509.1 | 94.937 | 237 | 11 | 1 | 1 | 237 | 1 | 236 | 9.31e-156 | 442 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0272550 | sp|Q6R567|RMA1_CAPAN | 42.678 | 239 | 95 | 8 | 22 | 237 | 33 | 252 | 5.14e-51 | 169 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0272550 | A0A072V3E7 | 94.937 | 237 | 11 | 1 | 1 | 237 | 1 | 236 | 4.45e-156 | 442 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0192040 | Msa0272550 | 0.912414 | 2.002904e-83 | -8.615850e-47 |
Msa0272550 | Msa0312750 | 0.902449 | 9.588030e-79 | -8.615850e-47 |
Msa0272550 | Msa0518650 | 0.825867 | 3.707765e-54 | -8.615850e-47 |
Msa0272550 | Msa0532910 | -0.817512 | 3.173007e-52 | -8.615850e-47 |
Msa0272550 | Msa0667710 | -0.815288 | 9.982358e-52 | -8.615850e-47 |
Msa0272550 | Msa1207000 | 0.805321 | 1.412620e-49 | -8.615850e-47 |
Msa0272550 | Msa1207090 | 0.818167 | 2.257400e-52 | -8.615850e-47 |
Msa0272550 | Msa1302120 | 0.803629 | 3.181766e-49 | -8.615850e-47 |
Msa0272550 | Msa1420630 | -0.819330 | 1.229360e-52 | -8.615850e-47 |
Msa0272550 | Msa1425570 | -0.820605 | 6.277979e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0272550 | MtrunA17_Chr2g0282171 | 94.937 | 237 | 11 | 1 | 1 | 237 | 1 | 236 | 8.56e-160 | 442 |
Msa0272550 | MtrunA17_Chr4g0047381 | 55.172 | 232 | 80 | 8 | 1 | 223 | 1 | 217 | 1.98e-73 | 223 |
Msa0272550 | MtrunA17_Chr4g0047371 | 43.443 | 244 | 86 | 8 | 1 | 237 | 1 | 199 | 1.18e-53 | 171 |
Msa0272550 | MtrunA17_Chr4g0021321 | 40.851 | 235 | 113 | 7 | 12 | 237 | 27 | 244 | 7.16e-47 | 155 |
Msa0272550 | MtrunA17_Chr8g0360011 | 41.048 | 229 | 123 | 6 | 4 | 223 | 11 | 236 | 2.90e-45 | 151 |
Msa0272550 | MtrunA17_Chr2g0324261 | 40.367 | 218 | 106 | 5 | 19 | 225 | 31 | 235 | 3.14e-44 | 149 |
Msa0272550 | MtrunA17_Chr2g0324291 | 51.923 | 104 | 44 | 3 | 28 | 130 | 30 | 128 | 9.24e-29 | 106 |
Msa0272550 | MtrunA17_Chr2g0324281 | 56.322 | 87 | 25 | 2 | 28 | 114 | 18 | 91 | 2.37e-27 | 103 |
Msa0272550 | MtrunA17_Chr7g0258821 | 40.000 | 120 | 58 | 3 | 10 | 125 | 148 | 257 | 3.98e-24 | 99.8 |
Msa0272550 | MtrunA17_Chr1g0175871 | 44.330 | 97 | 52 | 2 | 23 | 117 | 50 | 146 | 4.03e-23 | 92.8 |
Msa0272550 | MtrunA17_Chr1g0154561 | 47.253 | 91 | 40 | 2 | 26 | 116 | 30 | 112 | 1.06e-22 | 92.4 |
Msa0272550 | MtrunA17_Chr1g0175571 | 45.055 | 91 | 43 | 2 | 26 | 116 | 120 | 203 | 5.51e-22 | 90.5 |
Msa0272550 | MtrunA17_Chr5g0403521 | 54.412 | 68 | 24 | 1 | 26 | 93 | 33 | 93 | 9.34e-22 | 90.1 |
Msa0272550 | MtrunA17_Chr1g0175641 | 53.125 | 64 | 24 | 1 | 28 | 91 | 76 | 133 | 4.03e-21 | 87.0 |
Msa0272550 | MtrunA17_Chr2g0308681 | 39.080 | 87 | 39 | 2 | 14 | 93 | 86 | 165 | 1.29e-15 | 73.6 |
Msa0272550 | MtrunA17_Chr1g0150921 | 36.000 | 75 | 38 | 1 | 16 | 90 | 352 | 416 | 3.58e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0272550 | AT4G03510.3 | 40.000 | 240 | 106 | 9 | 13 | 237 | 33 | 249 | 1.21e-44 | 150 |
Msa0272550 | AT4G03510.1 | 40.000 | 240 | 106 | 9 | 13 | 237 | 33 | 249 | 1.21e-44 | 150 |
Msa0272550 | AT4G03510.2 | 40.000 | 240 | 106 | 9 | 13 | 237 | 33 | 249 | 1.21e-44 | 150 |
Msa0272550 | AT4G03510.4 | 40.000 | 240 | 106 | 9 | 13 | 237 | 33 | 249 | 1.21e-44 | 150 |
Msa0272550 | AT4G27470.1 | 41.150 | 226 | 99 | 11 | 10 | 223 | 26 | 229 | 1.93e-39 | 137 |
Msa0272550 | AT4G28270.1 | 34.375 | 224 | 94 | 5 | 23 | 237 | 14 | 193 | 9.93e-37 | 128 |
Msa0272550 | AT1G74990.1 | 43.443 | 122 | 56 | 4 | 11 | 131 | 3 | 112 | 7.23e-26 | 98.6 |
Msa0272550 | AT3G58030.4 | 39.695 | 131 | 58 | 4 | 16 | 142 | 121 | 234 | 1.21e-24 | 101 |
Msa0272550 | AT3G58030.2 | 39.695 | 131 | 58 | 4 | 16 | 142 | 121 | 234 | 1.21e-24 | 101 |
Msa0272550 | AT3G58030.1 | 39.695 | 131 | 58 | 4 | 16 | 142 | 121 | 234 | 1.21e-24 | 101 |
Msa0272550 | AT3G58030.3 | 39.695 | 131 | 58 | 4 | 16 | 142 | 121 | 234 | 1.21e-24 | 101 |
Msa0272550 | AT2G42030.1 | 44.231 | 104 | 47 | 2 | 28 | 131 | 139 | 231 | 1.02e-23 | 98.6 |
Msa0272550 | AT1G19310.1 | 59.091 | 66 | 20 | 1 | 28 | 93 | 21 | 79 | 5.54e-23 | 93.6 |
Msa0272550 | AT2G23780.3 | 49.333 | 75 | 31 | 1 | 19 | 93 | 17 | 84 | 1.01e-21 | 90.1 |
Msa0272550 | AT2G23780.2 | 49.333 | 75 | 31 | 1 | 19 | 93 | 17 | 84 | 1.01e-21 | 90.1 |
Msa0272550 | AT2G23780.1 | 49.333 | 75 | 31 | 1 | 19 | 93 | 17 | 84 | 1.01e-21 | 90.1 |
Msa0272550 | AT2G44410.1 | 33.981 | 103 | 49 | 4 | 26 | 122 | 121 | 210 | 3.64e-14 | 71.6 |
Find 58 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTGCTTCTGACATGGAATT+TGG | 0.134595 | 2_3:+4082208 | None:intergenic |
TTCAGGTGCTCAAGCTCTTT+TGG | 0.228650 | 2_3:-4081903 | Msa0272550:CDS |
TCCGTATCGAAATCCTTATC+AGG | 0.353516 | 2_3:-4081846 | Msa0272550:CDS |
TTTAAATATTGTCCCTGATA+AGG | 0.360067 | 2_3:+4081833 | None:intergenic |
CCACCAAGACCAACTGCTTC+AGG | 0.366329 | 2_3:-4081920 | Msa0272550:CDS |
CCCACCATCTGATAAGAATT+CGG | 0.384732 | 2_3:+4081668 | None:intergenic |
ACCCTCTTGTTGTTGGTATG+AGG | 0.406828 | 2_3:+4081805 | None:intergenic |
TTTGTGGCCACCTTTACTGC+TGG | 0.418114 | 2_3:-4082120 | Msa0272550:CDS |
TAGCATCACCCTCTTGTTGT+TGG | 0.423010 | 2_3:+4081798 | None:intergenic |
GCACCTGAAGCAGTTGGTCT+TGG | 0.423857 | 2_3:+4081917 | None:intergenic |
GTTCAAAGTGATGATTCTCT+TGG | 0.429642 | 2_3:-4082073 | Msa0272550:CDS |
CTTAGACTTCGCCAACGAAC+CGG | 0.433237 | 2_3:-4082152 | Msa0272550:CDS |
ACCACAATGGTCCCATTGTA+TGG | 0.455188 | 2_3:-4082001 | Msa0272550:CDS |
CCTGAAGCAGTTGGTCTTGG+TGG | 0.457076 | 2_3:+4081920 | None:intergenic |
GGCCACCGCGGCCATACAAT+GGG | 0.462138 | 2_3:+4081990 | None:intergenic |
CGGCGGGTGGCCGACTACTC+CGG | 0.478519 | 2_3:+4081688 | None:intergenic |
TGGCCACCGCGGCCATACAA+TGG | 0.491039 | 2_3:+4081989 | None:intergenic |
TTCTGACATGGAATTTGGAA+TGG | 0.496636 | 2_3:+4082213 | None:intergenic |
GAACCGGTAGTCACCCTTTG+TGG | 0.499048 | 2_3:-4082136 | Msa0272550:CDS |
AGATGCAAGGCCAGCAGTAA+AGG | 0.499222 | 2_3:+4082110 | None:intergenic |
GTTGCAATCAAAACAACCAT+TGG | 0.524152 | 2_3:+4082180 | None:intergenic |
ACTTCACAAATGCTTAGTCT+TGG | 0.524773 | 2_3:-4081776 | Msa0272550:CDS |
CCCTGATAAGGATTTCGATA+CGG | 0.531451 | 2_3:+4081845 | None:intergenic |
GCAGTAAAGGTGGCCACAAA+GGG | 0.540437 | 2_3:+4082123 | None:intergenic |
GGAATCTTCTGCTTCTGACA+TGG | 0.544972 | 2_3:+4082201 | None:intergenic |
ACATTCCAACCACAGGATGC+TGG | 0.545754 | 2_3:+4081729 | None:intergenic |
TCCTGTGGTTGGAATGTTCG+AGG | 0.548858 | 2_3:-4081723 | Msa0272550:CDS |
TCTCGCCAGCATCCTGTGGT+TGG | 0.550366 | 2_3:-4081734 | Msa0272550:CDS |
AGCAGTAAAGGTGGCCACAA+AGG | 0.557862 | 2_3:+4082122 | None:intergenic |
CCATCTGATAAGAATTCGGC+GGG | 0.562245 | 2_3:+4081672 | None:intergenic |
AGGATGCTGGCGAGATCTTG+AGG | 0.565005 | 2_3:+4081742 | None:intergenic |
ATGGTCCCATTGTATGGCCG+CGG | 0.566563 | 2_3:-4081995 | Msa0272550:CDS |
TCCTCGAACATTCCAACCAC+AGG | 0.567924 | 2_3:+4081722 | None:intergenic |
GCCGAATTCTTATCAGATGG+TGG | 0.576950 | 2_3:-4081669 | Msa0272550:CDS |
AAGGGTGACTACCGGTTCGT+TGG | 0.577209 | 2_3:+4082141 | None:intergenic |
GCTGGCCTTGCATCTACAAG+TGG | 0.589809 | 2_3:-4082102 | Msa0272550:CDS |
GTCCCATTGTATGGCCGCGG+TGG | 0.589992 | 2_3:-4081992 | Msa0272550:CDS |
AAGATCTCGCCAGCATCCTG+TGG | 0.590620 | 2_3:-4081738 | Msa0272550:CDS |
GCTTGAGCACCTGAAGCAGT+TGG | 0.591446 | 2_3:+4081911 | None:intergenic |
ATAATAGCTCTAGATTGAGA+AGG | 0.602529 | 2_3:-4081643 | Msa0272550:CDS |
TGGCCACAAAGGGTGACTAC+CGG | 0.604390 | 2_3:+4082133 | None:intergenic |
TGGAGCCACTTGTAGATGCA+AGG | 0.606645 | 2_3:+4082097 | None:intergenic |
CCCGCCGAATTCTTATCAGA+TGG | 0.609487 | 2_3:-4081672 | Msa0272550:CDS |
TGCAAGGCCAGCAGTAAAGG+TGG | 0.611126 | 2_3:+4082113 | None:intergenic |
CCGAATTCTTATCAGATGGT+GGG | 0.611382 | 2_3:-4081668 | Msa0272550:CDS |
TCTTTGCATACAGGACATTG+TGG | 0.614114 | 2_3:+4082037 | None:intergenic |
TTCCTCATACCAACAACAAG+AGG | 0.616354 | 2_3:-4081807 | Msa0272550:CDS |
GAGAATCATCACTTTGAACA+TGG | 0.619892 | 2_3:+4082077 | None:intergenic |
CCGTATCGAAATCCTTATCA+GGG | 0.628835 | 2_3:-4081845 | Msa0272550:CDS |
TCGGTGGAGCGTGGCCACCG+CGG | 0.635955 | 2_3:+4081978 | None:intergenic |
TCTGATAAGAATTCGGCGGG+TGG | 0.643245 | 2_3:+4081675 | None:intergenic |
ACCATCTGATAAGAATTCGG+CGG | 0.653831 | 2_3:+4081671 | None:intergenic |
GCGAGATCTTGAGGTCGTTG+AGG | 0.655268 | 2_3:+4081751 | None:intergenic |
GCCATACAATGGGACCATTG+TGG | 0.655448 | 2_3:+4082000 | None:intergenic |
TCAGAAGCAGAAGATTCCAA+TGG | 0.671202 | 2_3:-4082196 | Msa0272550:CDS |
TCCTCATACCAACAACAAGA+GGG | 0.675909 | 2_3:-4081806 | Msa0272550:CDS |
AAATATATCACATACCACAA+TGG | 0.681589 | 2_3:-4082014 | Msa0272550:CDS |
GGTGGCCACGCTCCACCGAG+TGG | 0.693866 | 2_3:-4081974 | Msa0272550:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GATATATTTTCTTTGCATAC+AGG | + | chr2_3:4081784-4081803 | None:intergenic | 25.0% |
! | AAATATATCACATACCACAA+TGG | - | chr2_3:4081795-4081814 | Msa0272550:CDS | 25.0% |
! | TTTAAATATTGTCCCTGATA+AGG | + | chr2_3:4081979-4081998 | None:intergenic | 25.0% |
! | TGGAATGGTTTTCAATTCAT+GGG | + | chr2_3:4081584-4081603 | None:intergenic | 30.0% |
! | TTGGAATGGTTTTCAATTCA+TGG | + | chr2_3:4081585-4081604 | None:intergenic | 30.0% |
!! | ATAATAGCTCTAGATTGAGA+AGG | - | chr2_3:4082166-4082185 | Msa0272550:CDS | 30.0% |
TTCTGACATGGAATTTGGAA+TGG | + | chr2_3:4081599-4081618 | None:intergenic | 35.0% | |
GTTGCAATCAAAACAACCAT+TGG | + | chr2_3:4081632-4081651 | None:intergenic | 35.0% | |
GAGAATCATCACTTTGAACA+TGG | + | chr2_3:4081735-4081754 | None:intergenic | 35.0% | |
GTTCAAAGTGATGATTCTCT+TGG | - | chr2_3:4081736-4081755 | Msa0272550:CDS | 35.0% | |
! | CAACAAGAAGATTTTCCACT+CGG | + | chr2_3:4081853-4081872 | None:intergenic | 35.0% |
ACTTCACAAATGCTTAGTCT+TGG | - | chr2_3:4082033-4082052 | Msa0272550:CDS | 35.0% | |
TCTGCTTCTGACATGGAATT+TGG | + | chr2_3:4081604-4081623 | None:intergenic | 40.0% | |
TCAGAAGCAGAAGATTCCAA+TGG | - | chr2_3:4081613-4081632 | Msa0272550:CDS | 40.0% | |
TCTTTGCATACAGGACATTG+TGG | + | chr2_3:4081775-4081794 | None:intergenic | 40.0% | |
TCCGTATCGAAATCCTTATC+AGG | - | chr2_3:4081963-4081982 | Msa0272550:CDS | 40.0% | |
CCCTGATAAGGATTTCGATA+CGG | + | chr2_3:4081967-4081986 | None:intergenic | 40.0% | |
CCGTATCGAAATCCTTATCA+GGG | - | chr2_3:4081964-4081983 | Msa0272550:CDS | 40.0% | |
TTCCTCATACCAACAACAAG+AGG | - | chr2_3:4082002-4082021 | Msa0272550:CDS | 40.0% | |
TCCTCATACCAACAACAAGA+GGG | - | chr2_3:4082003-4082022 | Msa0272550:CDS | 40.0% | |
! | TTCGAGGAGATGATTTTTGC+CGG | - | chr2_3:4082102-4082121 | Msa0272550:CDS | 40.0% |
! | ATGATTTTTGCCGGAGTAGT+CGG | - | chr2_3:4082111-4082130 | Msa0272550:CDS | 40.0% |
ACCATCTGATAAGAATTCGG+CGG | + | chr2_3:4082141-4082160 | None:intergenic | 40.0% | |
CCCACCATCTGATAAGAATT+CGG | + | chr2_3:4082144-4082163 | None:intergenic | 40.0% | |
CCGAATTCTTATCAGATGGT+GGG | - | chr2_3:4082141-4082160 | Msa0272550:CDS | 40.0% | |
GGAATCTTCTGCTTCTGACA+TGG | + | chr2_3:4081611-4081630 | None:intergenic | 45.0% | |
ACCACAATGGTCCCATTGTA+TGG | - | chr2_3:4081808-4081827 | Msa0272550:CDS | 45.0% | |
! | CAAGAAGATTTTCCACTCGG+TGG | + | chr2_3:4081850-4081869 | None:intergenic | 45.0% |
! | TTCAGGTGCTCAAGCTCTTT+TGG | - | chr2_3:4081906-4081925 | Msa0272550:CDS | 45.0% |
!! | ACCCTCTTGTTGTTGGTATG+AGG | + | chr2_3:4082007-4082026 | None:intergenic | 45.0% |
! | TAGCATCACCCTCTTGTTGT+TGG | + | chr2_3:4082014-4082033 | None:intergenic | 45.0% |
CCATCTGATAAGAATTCGGC+GGG | + | chr2_3:4082140-4082159 | None:intergenic | 45.0% | |
GCCGAATTCTTATCAGATGG+TGG | - | chr2_3:4082140-4082159 | Msa0272550:CDS | 45.0% | |
CTTAGACTTCGCCAACGAAC+CGG | - | chr2_3:4081657-4081676 | Msa0272550:CDS | 50.0% | |
GCAGTAAAGGTGGCCACAAA+GGG | + | chr2_3:4081689-4081708 | None:intergenic | 50.0% | |
AGCAGTAAAGGTGGCCACAA+AGG | + | chr2_3:4081690-4081709 | None:intergenic | 50.0% | |
TTTGTGGCCACCTTTACTGC+TGG | - | chr2_3:4081689-4081708 | Msa0272550:CDS | 50.0% | |
AGATGCAAGGCCAGCAGTAA+AGG | + | chr2_3:4081702-4081721 | None:intergenic | 50.0% | |
TGGAGCCACTTGTAGATGCA+AGG | + | chr2_3:4081715-4081734 | None:intergenic | 50.0% | |
GCCATACAATGGGACCATTG+TGG | + | chr2_3:4081812-4081831 | None:intergenic | 50.0% | |
ACATTCCAACCACAGGATGC+TGG | + | chr2_3:4082083-4082102 | None:intergenic | 50.0% | |
TCCTGTGGTTGGAATGTTCG+AGG | - | chr2_3:4082086-4082105 | Msa0272550:CDS | 50.0% | |
TCCTCGAACATTCCAACCAC+AGG | + | chr2_3:4082090-4082109 | None:intergenic | 50.0% | |
TCTGATAAGAATTCGGCGGG+TGG | + | chr2_3:4082137-4082156 | None:intergenic | 50.0% | |
CCCGCCGAATTCTTATCAGA+TGG | - | chr2_3:4082137-4082156 | Msa0272550:CDS | 50.0% | |
!! | AAGGGTGACTACCGGTTCGT+TGG | + | chr2_3:4081671-4081690 | None:intergenic | 55.0% |
GAACCGGTAGTCACCCTTTG+TGG | - | chr2_3:4081673-4081692 | Msa0272550:CDS | 55.0% | |
TGGCCACAAAGGGTGACTAC+CGG | + | chr2_3:4081679-4081698 | None:intergenic | 55.0% | |
TGCAAGGCCAGCAGTAAAGG+TGG | + | chr2_3:4081699-4081718 | None:intergenic | 55.0% | |
!! | GCTGGCCTTGCATCTACAAG+TGG | - | chr2_3:4081707-4081726 | Msa0272550:CDS | 55.0% |
ATGGTCCCATTGTATGGCCG+CGG | - | chr2_3:4081814-4081833 | Msa0272550:CDS | 55.0% | |
!! | ATTTTCCACTCGGTGGAGCG+TGG | + | chr2_3:4081843-4081862 | None:intergenic | 55.0% |
!! | CCTGAAGCAGTTGGTCTTGG+TGG | + | chr2_3:4081892-4081911 | None:intergenic | 55.0% |
CCACCAAGACCAACTGCTTC+AGG | - | chr2_3:4081889-4081908 | Msa0272550:CDS | 55.0% | |
! | GCACCTGAAGCAGTTGGTCT+TGG | + | chr2_3:4081895-4081914 | None:intergenic | 55.0% |
GCTTGAGCACCTGAAGCAGT+TGG | + | chr2_3:4081901-4081920 | None:intergenic | 55.0% | |
GCGAGATCTTGAGGTCGTTG+AGG | + | chr2_3:4082061-4082080 | None:intergenic | 55.0% | |
AGGATGCTGGCGAGATCTTG+AGG | + | chr2_3:4082070-4082089 | None:intergenic | 55.0% | |
AAGATCTCGCCAGCATCCTG+TGG | - | chr2_3:4082071-4082090 | Msa0272550:CDS | 55.0% | |
TCTCGCCAGCATCCTGTGGT+TGG | - | chr2_3:4082075-4082094 | Msa0272550:CDS | 60.0% | |
GTCCCATTGTATGGCCGCGG+TGG | - | chr2_3:4081817-4081836 | Msa0272550:CDS | 65.0% | |
GGCCACCGCGGCCATACAAT+GGG | + | chr2_3:4081822-4081841 | None:intergenic | 65.0% | |
TGGCCACCGCGGCCATACAA+TGG | + | chr2_3:4081823-4081842 | None:intergenic | 65.0% | |
TCGGTGGAGCGTGGCCACCG+CGG | + | chr2_3:4081834-4081853 | None:intergenic | 75.0% | |
GGTGGCCACGCTCCACCGAG+TGG | - | chr2_3:4081835-4081854 | Msa0272550:CDS | 75.0% | |
CGGCGGGTGGCCGACTACTC+CGG | + | chr2_3:4082124-4082143 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 4081559 | 4082272 | 4081559 | ID=Msa0272550;Name=Msa0272550 |
chr2_3 | mRNA | 4081559 | 4082272 | 4081559 | ID=Msa0272550-mRNA-1;Parent=Msa0272550;Name=Msa0272550-mRNA-1;_AED=0.20;_eAED=0.21;_QI=0|-1|0|1|-1|1|1|0|237 |
chr2_3 | exon | 4081559 | 4082272 | 4081559 | ID=Msa0272550-mRNA-1:exon:2061;Parent=Msa0272550-mRNA-1 |
chr2_3 | CDS | 4081559 | 4082272 | 4081559 | ID=Msa0272550-mRNA-1:cds;Parent=Msa0272550-mRNA-1 |
Gene Sequence |
Protein sequence |