AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0532910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0532910 MtrunA17_Chr4g0006241 97.955 440 8 1 1 439 1 440 0.0 889
Msa0532910 MtrunA17_Chr7g0242601 74.273 447 106 2 1 439 1 446 0.0 690
Msa0532910 MtrunA17_Chr5g0430241 68.617 376 110 1 65 432 10 385 0.0 555
Msa0532910 MtrunA17_Chr3g0105171 71.508 358 102 0 82 439 26 383 0.0 540
Msa0532910 MtrunA17_Chr1g0175301 38.509 322 180 5 85 390 26 345 2.26e-68 222
Msa0532910 MtrunA17_Chr7g0258651 36.932 352 193 8 58 391 6 346 3.19e-65 214
Msa0532910 MtrunA17_Chr1g0210511 37.826 230 132 4 171 391 14 241 1.24e-40 146
Msa0532910 MtrunA17_Chr4g0074071 29.118 340 215 12 62 392 75 397 3.50e-33 130
Msa0532910 MtrunA17_Chr2g0305881 32.624 141 91 3 60 198 70 208 8.83e-16 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0532910 AT5G05580.1 74.208 442 102 4 1 437 1 435 0.0 680
Msa0532910 AT3G11170.1 71.493 442 117 2 1 435 1 440 0.0 650
Msa0532910 AT5G05580.2 73.506 385 90 4 1 380 1 378 0.0 586
Msa0532910 AT2G29980.1 68.766 381 119 0 59 439 2 382 0.0 556
Msa0532910 AT2G29980.2 67.153 274 90 0 59 332 2 275 2.19e-134 388
Msa0532910 AT3G12120.1 37.654 324 182 8 85 391 25 345 5.63e-67 219
Msa0532910 AT3G12120.2 37.654 324 182 8 85 391 25 345 5.63e-67 219
Msa0532910 AT4G30950.1 29.586 338 215 12 59 389 74 395 1.44e-31 125

Find 118 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCAATTACTCAAGCTTTA+TGG 0.136027 4_1:+7482127 Msa0532910:CDS
GGCACAAACAAGTCACTATT+TGG 0.140954 4_1:-7482016 None:intergenic
CTGCTCAAGGAACCATGTTT+TGG 0.171359 4_1:+7480450 Msa0532910:CDS
GGTTTGTTTGGCCACTTTAT+TGG 0.187935 4_1:+7480426 Msa0532910:CDS
ATTTCACTCTTAATATTTAT+AGG 0.191977 4_1:-7483678 None:intergenic
GCTATGGCTGCTTTGCTTGT+AGG 0.251364 4_1:+7482082 Msa0532910:CDS
TTGTGTTTGTTCTTGGTTTA+GGG 0.253549 4_1:-7480073 None:intergenic
CTTATATCACCTAATGTAAA+AGG 0.263942 4_1:-7480287 None:intergenic
GGTGCACCAGGGTCAAAATT+TGG 0.265489 4_1:-7480260 None:intergenic
AATGAAATTGTGTTTGTTCT+TGG 0.270224 4_1:-7480080 None:intergenic
GTGGAGGGTGGTGTTGGATT+TGG 0.274206 4_1:-7479954 None:intergenic
ATTGTGTTTGTTCTTGGTTT+AGG 0.275137 4_1:-7480074 None:intergenic
GCTGCTTTGCTTGTAGGTTT+AGG 0.278162 4_1:+7482088 Msa0532910:CDS
AATCTATGAGCTATGTTGTT+AGG 0.285313 4_1:+7480351 Msa0532910:CDS
GGTAAAGGACTAGATTTCTT+TGG 0.287183 4_1:-7483412 None:intergenic
GGAAGAGGTGCTTTACAAAT+TGG 0.287961 4_1:+7483718 Msa0532910:three_prime_UTR
TCTTCCTCTGCAACCCTTGA+AGG 0.290001 4_1:-7480203 None:intergenic
GTTTGTTTGGCCACTTTATT+GGG 0.291498 4_1:+7480427 Msa0532910:CDS
TCTAAAGTTGTTGTTGGATT+TGG 0.310519 4_1:-7479930 None:intergenic
AAAGGGTATCTTCAGATCTA+AGG 0.313778 4_1:+7480144 Msa0532910:CDS
AAAAGGTGGAGGGGTAGTTC+AGG 0.318396 4_1:+7480232 Msa0532910:CDS
ATGTTAATAGTTGGTTTGTT+TGG 0.321832 4_1:+7480414 Msa0532910:CDS
ACCATGGTAATTTGTCTTCA+TGG 0.346135 4_1:-7482314 None:intergenic
TCTTTGTTCTTGGTCATGAT+TGG 0.352865 4_1:+7480477 Msa0532910:CDS
CACCAGTGTCACTGACAAAA+TGG 0.361992 4_1:-7483477 None:intergenic
ACCTAAACATTGTTGGGTTA+AGG 0.363933 4_1:+7480319 Msa0532910:CDS
GCAGAGGAAGAAGAAGAAAA+AGG 0.365509 4_1:+7480215 Msa0532910:CDS
TAGATCTGAAGATACCCTTT+TGG 0.370698 4_1:-7480141 None:intergenic
GAGGCAGCTAAACCAGTTCT+TGG 0.371883 4_1:+7483373 Msa0532910:CDS
TTGTAATATCTTCCAAGAAC+TGG 0.377558 4_1:-7483385 None:intergenic
TAAACATACCATCCATGATA+TGG 0.377797 4_1:-7481126 None:intergenic
ACAACTCTCGATCGTGACTA+TGG 0.378968 4_1:+7482627 Msa0532910:CDS
ATTGAGTGATTATTATTGAA+TGG 0.380102 4_1:+7483895 Msa0532910:three_prime_UTR
CCTAAGTTAAACAGTGTTGC+GGG 0.381423 4_1:+7481075 Msa0532910:CDS
CAGCTATACCTAAACATTGT+TGG 0.384073 4_1:+7480312 Msa0532910:CDS
TAAAGCTTGAGTAATTGAAT+TGG 0.388459 4_1:-7482124 None:intergenic
GTAGAAGAGCCACTAAGGTT+AGG 0.394730 4_1:-7483523 None:intergenic
CAGGAATGGAGCTACCTTAG+AGG 0.397812 4_1:+7482597 Msa0532910:intron
GAGTTGTAAGTCCGCCTCTA+AGG 0.398628 4_1:-7482611 None:intergenic
ATTGTTGGGTTAAGGATCCT+TGG 0.399359 4_1:+7480327 Msa0532910:CDS
AAGTGGTAGTGTGGGATTTG+AGG 0.405657 4_1:-7482705 None:intergenic
CCTTTACCATTTCACCTCCT+TGG 0.406643 4_1:+7483427 Msa0532910:CDS
TCCTTAACCCAACAATGTTT+AGG 0.408115 4_1:-7480320 None:intergenic
TGAAGGGAGTTATGTCTTCA+TGG 0.410198 4_1:+7483839 Msa0532910:three_prime_UTR
TTTGGTTCTAAAGTTGTTGT+TGG 0.413285 4_1:-7479936 None:intergenic
TTGCTGCTTATGTTAATAGT+TGG 0.419399 4_1:+7480405 Msa0532910:CDS
GTAGGTTTAGGATTTGTAAT+GGG 0.420064 4_1:+7482100 Msa0532910:CDS
AGCTATACCTAAACATTGTT+GGG 0.420218 4_1:+7480313 Msa0532910:CDS
GGAATGGAATTTACCACATA+AGG 0.420459 4_1:-7482154 None:intergenic
TGTAGGTTTAGGATTTGTAA+TGG 0.421486 4_1:+7482099 Msa0532910:CDS
TAAGAGTGAGTGCTCCTTCA+AGG 0.422040 4_1:+7480189 Msa0532910:CDS
AAATCTCCAAGGAGGTGAAA+TGG 0.440919 4_1:-7483433 None:intergenic
GCTTTATGGCATTCCTTATG+TGG 0.442119 4_1:+7482141 Msa0532910:CDS
GTAAAAGGTGGTGGTGCACC+AGG 0.442471 4_1:-7480272 None:intergenic
CAAACAGACCCTAACCTTAG+TGG 0.442623 4_1:+7483514 Msa0532910:CDS
ATGGCCATGGTGATGCAAAT+AGG 0.454958 4_1:-7482295 None:intergenic
GCACAAACAAGTCACTATTT+GGG 0.459556 4_1:-7482015 None:intergenic
ATCTATGAGCTATGTTGTTA+GGG 0.462681 4_1:+7480352 Msa0532910:CDS
GTGTTTGAATTCAGTGGAGC+AGG 0.468799 4_1:+7481963 Msa0532910:intron
CATGCACATTGTCAAGGTTG+TGG 0.469530 4_1:+7483961 Msa0532910:three_prime_UTR
AAATTGTTTATTCTTGATGA+AGG 0.474936 4_1:+7483822 Msa0532910:three_prime_UTR
AGAGAAAATCTTCAAGAGCT+TGG 0.481339 4_1:+7481624 Msa0532910:CDS
CAAATTGGACTGTTGTAACT+TGG 0.483581 4_1:+7483733 Msa0532910:three_prime_UTR
CCCGCAACACTGTTTAACTT+AGG 0.489628 4_1:-7481075 None:intergenic
TACTCACAGCTTCAATTAAG+TGG 0.489994 4_1:-7482722 None:intergenic
TAGAAGAGCCACTAAGGTTA+GGG 0.494714 4_1:-7483522 None:intergenic
TTCAGTGGAGCAGGAGTCCT+GGG 0.495423 4_1:+7481972 Msa0532910:intron
ATTCAGTGGAGCAGGAGTCC+TGG 0.502823 4_1:+7481971 Msa0532910:intron
TTTAAGCAAAACAACCAAAA+GGG 0.507525 4_1:+7480127 Msa0532910:CDS
TGTTGTTAGGGATGTTGTTG+TGG 0.508034 4_1:+7480364 Msa0532910:CDS
TCCTCATAAGAAAAGGGAAG+AGG 0.511687 4_1:+7483703 Msa0532910:three_prime_UTR
TAGAAAGGATATGCAAGCAT+TGG 0.513379 4_1:-7481685 None:intergenic
TTGATGTAGAAGAGCCACTA+AGG 0.513464 4_1:-7483528 None:intergenic
AAGTGAGAACCACTCTTCCC+AGG 0.513601 4_1:-7481989 None:intergenic
CTTTGTCATGCACATTGTCA+AGG 0.515814 4_1:+7483955 Msa0532910:three_prime_UTR
CCACTTTATTGGGCTGCTCA+AGG 0.516126 4_1:+7480437 Msa0532910:CDS
GGATATGCAAGCATTGGAAA+AGG 0.516624 4_1:-7481679 None:intergenic
TTATTACCTCAACAGTATGT+TGG 0.518216 4_1:+7482056 Msa0532910:CDS
GAGTGAAACTAAAGTATGAA+AGG 0.518890 4_1:-7479989 None:intergenic
GTTCTTGGTTTAGGGTACAA+TGG 0.520187 4_1:-7480065 None:intergenic
TTACAACTTACAAGGTAGAA+AGG 0.522153 4_1:-7481700 None:intergenic
TTAGGGTACAATGGTGGAAG+TGG 0.522625 4_1:-7480056 None:intergenic
ACCATCCATGATATGGTACT+AGG 0.523521 4_1:-7481119 None:intergenic
TCAATCCTAGTACCATATCA+TGG 0.529822 4_1:+7481114 Msa0532910:CDS
AACAGTATGTTGGACAGCTA+TGG 0.530932 4_1:+7482066 Msa0532910:CDS
TACTCATTGATTGAAGCAAA+AGG 0.534663 4_1:+7483759 Msa0532910:three_prime_UTR
AATTGTTTATTCTTGATGAA+GGG 0.541167 4_1:+7483823 Msa0532910:three_prime_UTR
AATAACATCCATCATGACAT+TGG 0.543696 4_1:+7482657 Msa0532910:CDS
TGCTCCTTCAAGGGTTGCAG+AGG 0.544094 4_1:+7480199 Msa0532910:CDS
ATTACCATGGTATCGTGGAC+AGG 0.548527 4_1:+7482326 Msa0532910:CDS
CCAAGGAGGTGAAATGGTAA+AGG 0.549624 4_1:-7483427 None:intergenic
ATGTTGAAAATGATGAATCT+TGG 0.550797 4_1:+7481289 Msa0532910:CDS
AAGAGTGAGTGCTCCTTCAA+GGG 0.557691 4_1:+7480190 Msa0532910:CDS
TCACCTAATGTAAAAGGTGG+TGG 0.560118 4_1:-7480281 None:intergenic
CTTCAATTAAGTGGTAGTGT+GGG 0.565641 4_1:-7482713 None:intergenic
TCCTAGTACCATATCATGGA+TGG 0.566773 4_1:+7481118 Msa0532910:CDS
TCCTAAGTTAAACAGTGTTG+CGG 0.570080 4_1:+7481074 Msa0532910:CDS
GCTTCAATTAAGTGGTAGTG+TGG 0.575416 4_1:-7482714 None:intergenic
TAGTTTCACTCACTCACCAA+TGG 0.576236 4_1:+7480001 Msa0532910:exon
CCTTGAGCAGCCCAATAAAG+TGG 0.583743 4_1:-7480437 None:intergenic
CATGAGTTCCAATGTCATGA+TGG 0.588288 4_1:-7482665 None:intergenic
AGCAGGAGTCCTGGGAAGAG+TGG 0.590625 4_1:+7481980 Msa0532910:CDS
GTGACCTATTTGCATCACCA+TGG 0.611816 4_1:+7482291 Msa0532910:CDS
ATATCACCTAATGTAAAAGG+TGG 0.614456 4_1:-7480284 None:intergenic
CATATGACATATGAATTATG+TGG 0.619695 4_1:-7483599 None:intergenic
AACAAAGAGAGCCCAAAACA+TGG 0.628713 4_1:-7480462 None:intergenic
GACAAATTACCATGGTATCG+TGG 0.635203 4_1:+7482321 Msa0532910:CDS
ACATAGCTCATAGATTTCCA+AGG 0.638388 4_1:-7480344 None:intergenic
GTAATTTGTCTTCATGGCCA+TGG 0.639785 4_1:-7482308 None:intergenic
GATACCTGTCCACGATACCA+TGG 0.640882 4_1:-7482330 None:intergenic
AAATGATGAATCTTGGCACC+CGG 0.642419 4_1:+7481296 Msa0532910:CDS
CTTGGTTTAGGGTACAATGG+TGG 0.643600 4_1:-7480062 None:intergenic
AGCTGTCCAACATACTGTTG+AGG 0.647019 4_1:-7482062 None:intergenic
GAATGGAGCTACCTTAGAGG+CGG 0.680144 4_1:+7482600 Msa0532910:CDS
AGAACACATCATCAAAACCA+TGG 0.681922 4_1:+7481264 Msa0532910:CDS
TAAAAGGTGGTGGTGCACCA+GGG 0.683201 4_1:-7480271 None:intergenic
CTAAGTTAAACAGTGTTGCG+GGG 0.690117 4_1:+7481076 Msa0532910:CDS
GCCATGAAGACAAATTACCA+TGG 0.707625 4_1:+7482313 Msa0532910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTATCATAATATAAAC+TGG - chr4_1:7481000-7481019 None:intergenic 10.0%
!! CTAAAAATAGATTAAAATAA+AGG - chr4_1:7482407-7482426 None:intergenic 10.0%
!! TAAATTAATAGTATTAATCA+CGG - chr4_1:7482830-7482849 None:intergenic 10.0%
!! TTAATTATCATAATATAAAC+TGG - chr4_1:7481000-7481019 None:intergenic 10.0%
!! CTAAAAATAGATTAAAATAA+AGG - chr4_1:7482407-7482426 None:intergenic 10.0%
!! TAAATTAATAGTATTAATCA+CGG - chr4_1:7482830-7482849 None:intergenic 10.0%
!!! AAATATGGTATTTTTATTCT+TGG + chr4_1:7480698-7480717 Msa0532910:intron 15.0%
!! TGAACAAAAATTAACATTAA+AGG - chr4_1:7480780-7480799 None:intergenic 15.0%
!! AAAAAAGAGTTAAAAAAAAG+TGG - chr4_1:7482205-7482224 None:intergenic 15.0%
!! AAATTAATAGTATTAATCAC+GGG - chr4_1:7482829-7482848 None:intergenic 15.0%
!! TTAATACTATTAATTTACCT+TGG + chr4_1:7482833-7482852 Msa0532910:intron 15.0%
!! TAATACTATTAATTTACCTT+GGG + chr4_1:7482834-7482853 Msa0532910:intron 15.0%
!!! TAGTATATTTATGGTATTTT+AGG + chr4_1:7482985-7483004 Msa0532910:intron 15.0%
!! ATTTCACTCTTAATATTTAT+AGG - chr4_1:7483681-7483700 None:intergenic 15.0%
!!! AAATATGGTATTTTTATTCT+TGG + chr4_1:7480698-7480717 Msa0532910:intron 15.0%
!! TGAACAAAAATTAACATTAA+AGG - chr4_1:7480780-7480799 None:intergenic 15.0%
!! AAAAAAGAGTTAAAAAAAAG+TGG - chr4_1:7482205-7482224 None:intergenic 15.0%
!! AAATTAATAGTATTAATCAC+GGG - chr4_1:7482829-7482848 None:intergenic 15.0%
!! TTAATACTATTAATTTACCT+TGG + chr4_1:7482833-7482852 Msa0532910:intron 15.0%
!! TAATACTATTAATTTACCTT+GGG + chr4_1:7482834-7482853 Msa0532910:intron 15.0%
!!! TAGTATATTTATGGTATTTT+AGG + chr4_1:7482985-7483004 Msa0532910:intron 15.0%
!! ATTTCACTCTTAATATTTAT+AGG - chr4_1:7483681-7483700 None:intergenic 15.0%
!! CTTAAAAATCTAATCTTTGA+AGG - chr4_1:7480113-7480132 None:intergenic 20.0%
!! GAACTGAAAATCAATATTAA+AGG - chr4_1:7480544-7480563 None:intergenic 20.0%
!! TAAAGAAAAAACAACCAAAT+TGG - chr4_1:7480584-7480603 None:intergenic 20.0%
!!! GATTTTTGCTCAATTATTAT+TGG + chr4_1:7480618-7480637 Msa0532910:intron 20.0%
!! GCTATGATAATTGATAAATA+TGG + chr4_1:7480683-7480702 Msa0532910:intron 20.0%
!! TAGGTTGTTATAAATACTAA+TGG + chr4_1:7480727-7480746 Msa0532910:intron 20.0%
!!! TGTTGATTTTTTTTTCTTAG+TGG + chr4_1:7480809-7480828 Msa0532910:intron 20.0%
!!! TTTTGATGATTTTTTTTTCC+CGG + chr4_1:7480852-7480871 Msa0532910:intron 20.0%
!! TGATAATTAATAATCATGTC+TGG + chr4_1:7481010-7481029 Msa0532910:intron 20.0%
!! AAGTTTCTTATATGAAATCA+TGG - chr4_1:7481367-7481386 None:intergenic 20.0%
!!! TTTTTAAATAACTGCTAAAG+CGG + chr4_1:7481402-7481421 Msa0532910:intron 20.0%
!!! CTATTTCACAACATTTTTAA+TGG - chr4_1:7481467-7481486 None:intergenic 20.0%
!!! AGATTTGGAATTAAATGTAA+TGG - chr4_1:7481594-7481613 None:intergenic 20.0%
!! TTGTTAATCTTATCTTATGA+TGG + chr4_1:7481941-7481960 Msa0532910:intron 20.0%
!! AGAATTTATAAGGAAAAGAA+TGG - chr4_1:7482361-7482380 None:intergenic 20.0%
!! ATTTGATGAGAGAATTTATA+AGG - chr4_1:7482371-7482390 None:intergenic 20.0%
!! AATTTATTCCAAATGAGTAA+AGG - chr4_1:7482452-7482471 None:intergenic 20.0%
!!! AAGTTTATTTCTTGTTTATG+TGG + chr4_1:7482517-7482536 Msa0532910:intron 20.0%
!! AGCTTAAAGTAGTATATTTA+TGG + chr4_1:7482976-7482995 Msa0532910:intron 20.0%
!!! AATTTGATGATATTTAAGAC+TGG + chr4_1:7483040-7483059 Msa0532910:intron 20.0%
!! TTGATGAATGAATAATTGAA+TGG + chr4_1:7483311-7483330 Msa0532910:intron 20.0%
!!! AAATTTTCCTCATAAGAAAA+GGG + chr4_1:7483697-7483716 Msa0532910:three_prime_UTR 20.0%
!! AAATTGTTTATTCTTGATGA+AGG + chr4_1:7483822-7483841 Msa0532910:three_prime_UTR 20.0%
!! AATTGTTTATTCTTGATGAA+GGG + chr4_1:7483823-7483842 Msa0532910:three_prime_UTR 20.0%
!!! AATAATCACTCAATTTTTTG+AGG - chr4_1:7483889-7483908 None:intergenic 20.0%
!! ATTGAGTGATTATTATTGAA+TGG + chr4_1:7483895-7483914 Msa0532910:three_prime_UTR 20.0%
!! CTTAAAAATCTAATCTTTGA+AGG - chr4_1:7480113-7480132 None:intergenic 20.0%
!! GAACTGAAAATCAATATTAA+AGG - chr4_1:7480544-7480563 None:intergenic 20.0%
!! TAAAGAAAAAACAACCAAAT+TGG - chr4_1:7480584-7480603 None:intergenic 20.0%
!!! GATTTTTGCTCAATTATTAT+TGG + chr4_1:7480618-7480637 Msa0532910:intron 20.0%
!! GCTATGATAATTGATAAATA+TGG + chr4_1:7480683-7480702 Msa0532910:intron 20.0%
!! TAGGTTGTTATAAATACTAA+TGG + chr4_1:7480727-7480746 Msa0532910:intron 20.0%
!!! TGTTGATTTTTTTTTCTTAG+TGG + chr4_1:7480809-7480828 Msa0532910:intron 20.0%
!!! TTTTGATGATTTTTTTTTCC+CGG + chr4_1:7480852-7480871 Msa0532910:intron 20.0%
!! TGATAATTAATAATCATGTC+TGG + chr4_1:7481010-7481029 Msa0532910:intron 20.0%
!! AAGTTTCTTATATGAAATCA+TGG - chr4_1:7481367-7481386 None:intergenic 20.0%
!!! TTTTTAAATAACTGCTAAAG+CGG + chr4_1:7481402-7481421 Msa0532910:intron 20.0%
!!! CTATTTCACAACATTTTTAA+TGG - chr4_1:7481467-7481486 None:intergenic 20.0%
!!! AGATTTGGAATTAAATGTAA+TGG - chr4_1:7481594-7481613 None:intergenic 20.0%
!! TTGTTAATCTTATCTTATGA+TGG + chr4_1:7481941-7481960 Msa0532910:intron 20.0%
!! AGAATTTATAAGGAAAAGAA+TGG - chr4_1:7482361-7482380 None:intergenic 20.0%
!! ATTTGATGAGAGAATTTATA+AGG - chr4_1:7482371-7482390 None:intergenic 20.0%
!! AATTTATTCCAAATGAGTAA+AGG - chr4_1:7482452-7482471 None:intergenic 20.0%
!!! AAGTTTATTTCTTGTTTATG+TGG + chr4_1:7482517-7482536 Msa0532910:intron 20.0%
!! AGCTTAAAGTAGTATATTTA+TGG + chr4_1:7482976-7482995 Msa0532910:intron 20.0%
!!! AATTTGATGATATTTAAGAC+TGG + chr4_1:7483040-7483059 Msa0532910:intron 20.0%
!! TTGATGAATGAATAATTGAA+TGG + chr4_1:7483311-7483330 Msa0532910:intron 20.0%
!!! AAATTTTCCTCATAAGAAAA+GGG + chr4_1:7483697-7483716 Msa0532910:three_prime_UTR 20.0%
!! AAATTGTTTATTCTTGATGA+AGG + chr4_1:7483822-7483841 Msa0532910:three_prime_UTR 20.0%
!! AATTGTTTATTCTTGATGAA+GGG + chr4_1:7483823-7483842 Msa0532910:three_prime_UTR 20.0%
!!! AATAATCACTCAATTTTTTG+AGG - chr4_1:7483889-7483908 None:intergenic 20.0%
!! ATTGAGTGATTATTATTGAA+TGG + chr4_1:7483895-7483914 Msa0532910:three_prime_UTR 20.0%
!!! ACAATGTTTTTATCAGAATG+TGG + chr4_1:7480026-7480045 Msa0532910:CDS 25.0%
! AATGAAATTGTGTTTGTTCT+TGG - chr4_1:7480083-7480102 None:intergenic 25.0%
!! TTTTAAGCAAAACAACCAAA+AGG + chr4_1:7480126-7480145 Msa0532910:CDS 25.0%
! TTTAAGCAAAACAACCAAAA+GGG + chr4_1:7480127-7480146 Msa0532910:CDS 25.0%
! TAAGGTTTAAACCAAAAACA+TGG + chr4_1:7480162-7480181 Msa0532910:CDS 25.0%
! AAGGTTTAAACCAAAAACAT+GGG + chr4_1:7480163-7480182 Msa0532910:CDS 25.0%
! CTTATATCACCTAATGTAAA+AGG - chr4_1:7480290-7480309 None:intergenic 25.0%
!!! ATGTTAATAGTTGGTTTGTT+TGG + chr4_1:7480414-7480433 Msa0532910:CDS 25.0%
!! ATTTTCAGTTCAGTTACTAT+TGG + chr4_1:7480553-7480572 Msa0532910:intron 25.0%
!! TTTTTATTCTTGGTCATGAT+AGG + chr4_1:7480708-7480727 Msa0532910:intron 25.0%
! ACATAACAGATAGACTAAAT+TGG - chr4_1:7480753-7480772 None:intergenic 25.0%
! TATATTAACATCTTCCTATC+CGG - chr4_1:7480874-7480893 None:intergenic 25.0%
! GATAATGCATATTATATGCA+GGG + chr4_1:7480933-7480952 Msa0532910:intron 25.0%
! ATAATGCATATTATATGCAG+GGG + chr4_1:7480934-7480953 Msa0532910:intron 25.0%
!! AAGATTCATCATTTTCAACA+TGG - chr4_1:7481290-7481309 None:intergenic 25.0%
! ATGTTGAAAATGATGAATCT+TGG + chr4_1:7481289-7481308 Msa0532910:CDS 25.0%
!!! ATATTCACTGTTCTAGTTTA+TGG + chr4_1:7481326-7481345 Msa0532910:intron 25.0%
! TATCAAATAGCAGAAAATAG+AGG - chr4_1:7481534-7481553 None:intergenic 25.0%
! CAAACTATGGTAAAATAGTT+AGG - chr4_1:7481728-7481747 None:intergenic 25.0%
!!! ACATGTTTTGCTATTAGTTA+TGG + chr4_1:7481749-7481768 Msa0532910:intron 25.0%
!! TATTTTCAGTGTTTACATGT+CGG - chr4_1:7481816-7481835 None:intergenic 25.0%
!! ATAACATCTTTTCTCTCATT+TGG - chr4_1:7482040-7482059 None:intergenic 25.0%
! TAAAGCTTGAGTAATTGAAT+TGG - chr4_1:7482127-7482146 None:intergenic 25.0%
! ATTCAATTACTCAAGCTTTA+TGG + chr4_1:7482127-7482146 Msa0532910:CDS 25.0%
! GGAATAAATTTAGAAGCAAT+TGG + chr4_1:7482462-7482481 Msa0532910:intron 25.0%
!! GCTTTATCTTTCATTTTGTA+TGG + chr4_1:7482573-7482592 Msa0532910:intron 25.0%
! CGGGTATATTTGAAAAAAAT+AGG - chr4_1:7482810-7482829 None:intergenic 25.0%
!!! ACTTTAATTTTTATCTCCCA+AGG - chr4_1:7482853-7482872 None:intergenic 25.0%
! TGGGAGATAAAAATTAAAGT+TGG + chr4_1:7482853-7482872 Msa0532910:intron 25.0%
! GGGAGATAAAAATTAAAGTT+GGG + chr4_1:7482854-7482873 Msa0532910:intron 25.0%
!!! TATAAACACGAGAGTATTTT+CGG + chr4_1:7482881-7482900 Msa0532910:intron 25.0%
!! TAATGTGACTATTTTGTGTA+TGG - chr4_1:7482912-7482931 None:intergenic 25.0%
! CAAAAACAGAGTTGAAATAT+GGG - chr4_1:7483173-7483192 None:intergenic 25.0%
!! TTTTTATTAAATCTCCAAGG+AGG - chr4_1:7483444-7483463 None:intergenic 25.0%
!!! TGCTTTTTATTAAATCTCCA+AGG - chr4_1:7483447-7483466 None:intergenic 25.0%
! CATATGACATATGAATTATG+TGG - chr4_1:7483602-7483621 None:intergenic 25.0%
!! GAAATTTTCCTCATAAGAAA+AGG + chr4_1:7483696-7483715 Msa0532910:three_prime_UTR 25.0%
! ACTCTTGAAAAATACATAAG+TGG - chr4_1:7483989-7484008 None:intergenic 25.0%
!!! ACTTATGTATTTTTCAAGAG+TGG + chr4_1:7483988-7484007 Msa0532910:three_prime_UTR 25.0%
!!! ACAATGTTTTTATCAGAATG+TGG + chr4_1:7480026-7480045 Msa0532910:CDS 25.0%
! AATGAAATTGTGTTTGTTCT+TGG - chr4_1:7480083-7480102 None:intergenic 25.0%
!! TTTTAAGCAAAACAACCAAA+AGG + chr4_1:7480126-7480145 Msa0532910:CDS 25.0%
! TTTAAGCAAAACAACCAAAA+GGG + chr4_1:7480127-7480146 Msa0532910:CDS 25.0%
! TAAGGTTTAAACCAAAAACA+TGG + chr4_1:7480162-7480181 Msa0532910:CDS 25.0%
! AAGGTTTAAACCAAAAACAT+GGG + chr4_1:7480163-7480182 Msa0532910:CDS 25.0%
! CTTATATCACCTAATGTAAA+AGG - chr4_1:7480290-7480309 None:intergenic 25.0%
!!! ATGTTAATAGTTGGTTTGTT+TGG + chr4_1:7480414-7480433 Msa0532910:CDS 25.0%
!! ATTTTCAGTTCAGTTACTAT+TGG + chr4_1:7480553-7480572 Msa0532910:intron 25.0%
!! TTTTTATTCTTGGTCATGAT+AGG + chr4_1:7480708-7480727 Msa0532910:intron 25.0%
! ACATAACAGATAGACTAAAT+TGG - chr4_1:7480753-7480772 None:intergenic 25.0%
! TATATTAACATCTTCCTATC+CGG - chr4_1:7480874-7480893 None:intergenic 25.0%
! GATAATGCATATTATATGCA+GGG + chr4_1:7480933-7480952 Msa0532910:intron 25.0%
! ATAATGCATATTATATGCAG+GGG + chr4_1:7480934-7480953 Msa0532910:intron 25.0%
!! AAGATTCATCATTTTCAACA+TGG - chr4_1:7481290-7481309 None:intergenic 25.0%
! ATGTTGAAAATGATGAATCT+TGG + chr4_1:7481289-7481308 Msa0532910:CDS 25.0%
!!! ATATTCACTGTTCTAGTTTA+TGG + chr4_1:7481326-7481345 Msa0532910:intron 25.0%
! TATCAAATAGCAGAAAATAG+AGG - chr4_1:7481534-7481553 None:intergenic 25.0%
! CAAACTATGGTAAAATAGTT+AGG - chr4_1:7481728-7481747 None:intergenic 25.0%
!!! ACATGTTTTGCTATTAGTTA+TGG + chr4_1:7481749-7481768 Msa0532910:intron 25.0%
!! TATTTTCAGTGTTTACATGT+CGG - chr4_1:7481816-7481835 None:intergenic 25.0%
!! ATAACATCTTTTCTCTCATT+TGG - chr4_1:7482040-7482059 None:intergenic 25.0%
! TAAAGCTTGAGTAATTGAAT+TGG - chr4_1:7482127-7482146 None:intergenic 25.0%
! ATTCAATTACTCAAGCTTTA+TGG + chr4_1:7482127-7482146 Msa0532910:CDS 25.0%
! GGAATAAATTTAGAAGCAAT+TGG + chr4_1:7482462-7482481 Msa0532910:intron 25.0%
!! GCTTTATCTTTCATTTTGTA+TGG + chr4_1:7482573-7482592 Msa0532910:intron 25.0%
! CGGGTATATTTGAAAAAAAT+AGG - chr4_1:7482810-7482829 None:intergenic 25.0%
!!! ACTTTAATTTTTATCTCCCA+AGG - chr4_1:7482853-7482872 None:intergenic 25.0%
! TGGGAGATAAAAATTAAAGT+TGG + chr4_1:7482853-7482872 Msa0532910:intron 25.0%
! GGGAGATAAAAATTAAAGTT+GGG + chr4_1:7482854-7482873 Msa0532910:intron 25.0%
!!! TATAAACACGAGAGTATTTT+CGG + chr4_1:7482881-7482900 Msa0532910:intron 25.0%
!! TAATGTGACTATTTTGTGTA+TGG - chr4_1:7482912-7482931 None:intergenic 25.0%
! CAAAAACAGAGTTGAAATAT+GGG - chr4_1:7483173-7483192 None:intergenic 25.0%
!! TTTTTATTAAATCTCCAAGG+AGG - chr4_1:7483444-7483463 None:intergenic 25.0%
!!! TGCTTTTTATTAAATCTCCA+AGG - chr4_1:7483447-7483466 None:intergenic 25.0%
! CATATGACATATGAATTATG+TGG - chr4_1:7483602-7483621 None:intergenic 25.0%
!! GAAATTTTCCTCATAAGAAA+AGG + chr4_1:7483696-7483715 Msa0532910:three_prime_UTR 25.0%
! ACTCTTGAAAAATACATAAG+TGG - chr4_1:7483989-7484008 None:intergenic 25.0%
!!! ACTTATGTATTTTTCAAGAG+TGG + chr4_1:7483988-7484007 Msa0532910:three_prime_UTR 25.0%
! TCTAAAGTTGTTGTTGGATT+TGG - chr4_1:7479933-7479952 None:intergenic 30.0%
!! TTTGGTTCTAAAGTTGTTGT+TGG - chr4_1:7479939-7479958 None:intergenic 30.0%
!!! TGAAAGGAAGAAGTTTTTTG+TGG - chr4_1:7479976-7479995 None:intergenic 30.0%
GAGTGAAACTAAAGTATGAA+AGG - chr4_1:7479992-7480011 None:intergenic 30.0%
GATAAAAACATTGTTGCCAT+TGG - chr4_1:7480020-7480039 None:intergenic 30.0%
TTGTGTTTGTTCTTGGTTTA+GGG - chr4_1:7480076-7480095 None:intergenic 30.0%
ATTGTGTTTGTTCTTGGTTT+AGG - chr4_1:7480077-7480096 None:intergenic 30.0%
! ACTCTTAATTCCCATGTTTT+TGG - chr4_1:7480176-7480195 None:intergenic 30.0%
ATATCACCTAATGTAAAAGG+TGG - chr4_1:7480287-7480306 None:intergenic 30.0%
AGCTATACCTAAACATTGTT+GGG + chr4_1:7480313-7480332 Msa0532910:CDS 30.0%
AATCTATGAGCTATGTTGTT+AGG + chr4_1:7480351-7480370 Msa0532910:CDS 30.0%
ATCTATGAGCTATGTTGTTA+GGG + chr4_1:7480352-7480371 Msa0532910:CDS 30.0%
! TTGCTGCTTATGTTAATAGT+TGG + chr4_1:7480405-7480424 Msa0532910:CDS 30.0%
!! TACTATTGGTTCAACCAATT+TGG + chr4_1:7480567-7480586 Msa0532910:intron 30.0%
TTTGCTCAATTATTATTGGC+TGG + chr4_1:7480622-7480641 Msa0532910:intron 30.0%
!!! ATGATTTTTTTTTCCCGGAT+AGG + chr4_1:7480857-7480876 Msa0532910:intron 30.0%
ATATTAACATCTTCCTATCC+GGG - chr4_1:7480873-7480892 None:intergenic 30.0%
GGATAATGCATATTATATGC+AGG + chr4_1:7480932-7480951 Msa0532910:intron 30.0%
! AATAATCATGTCTGGTGTTT+TGG + chr4_1:7481018-7481037 Msa0532910:intron 30.0%
!! TGGTGTTTTGGATATTTTAG+TGG + chr4_1:7481030-7481049 Msa0532910:intron 30.0%
!!! TTTGGATATTTTAGTGGTCA+TGG + chr4_1:7481036-7481055 Msa0532910:intron 30.0%
TAAACATACCATCCATGATA+TGG - chr4_1:7481129-7481148 None:intergenic 30.0%
AACAGTGAATATAAGCTTAC+CGG - chr4_1:7481318-7481337 None:intergenic 30.0%
TTACAACTTACAAGGTAGAA+AGG - chr4_1:7481703-7481722 None:intergenic 30.0%
GTTAGGTATTACAACTTACA+AGG - chr4_1:7481711-7481730 None:intergenic 30.0%
AGCAAAACATGTTCAAACTA+TGG - chr4_1:7481741-7481760 None:intergenic 30.0%
TTACATGCAATTACAAGTGT+CGG + chr4_1:7481856-7481875 Msa0532910:intron 30.0%
TTATTACCTCAACAGTATGT+TGG + chr4_1:7482056-7482075 Msa0532910:CDS 30.0%
! TGTAGGTTTAGGATTTGTAA+TGG + chr4_1:7482099-7482118 Msa0532910:CDS 30.0%
! GTAGGTTTAGGATTTGTAAT+GGG + chr4_1:7482100-7482119 Msa0532910:CDS 30.0%
TTCATGGTTAGAAAAAGTGA+TGG - chr4_1:7482178-7482197 None:intergenic 30.0%
!!! CACTTTTTCTAACCATGAAT+TGG + chr4_1:7482179-7482198 Msa0532910:intron 30.0%
AAAAAAAAGTGGCCAATTCA+TGG - chr4_1:7482194-7482213 None:intergenic 30.0%
!!! GCTTGGTTTTTTCTTTCTAT+CGG - chr4_1:7482430-7482449 None:intergenic 30.0%
! ATCTTTCATTTTGTATGGAC+AGG + chr4_1:7482578-7482597 Msa0532910:intron 30.0%
AATAACATCCATCATGACAT+TGG + chr4_1:7482657-7482676 Msa0532910:CDS 30.0%
! GTTTTGCTTATAATCAAGAG+CGG - chr4_1:7482774-7482793 None:intergenic 30.0%
TTACTTATATTCAAGACCAG+AGG + chr4_1:7483082-7483101 Msa0532910:intron 30.0%
ACCACTAAATCAAGATTAGA+CGG + chr4_1:7483146-7483165 Msa0532910:intron 30.0%
CCAAAAACAGAGTTGAAATA+TGG - chr4_1:7483174-7483193 None:intergenic 30.0%
! CCATATTTCAACTCTGTTTT+TGG + chr4_1:7483171-7483190 Msa0532910:intron 30.0%
TCATCAAGAATAGTGTAAAG+AGG - chr4_1:7483298-7483317 None:intergenic 30.0%
TTGTAATATCTTCCAAGAAC+TGG - chr4_1:7483388-7483407 None:intergenic 30.0%
! TACTCATTGATTGAAGCAAA+AGG + chr4_1:7483759-7483778 Msa0532910:three_prime_UTR 30.0%
! TCTAAAGTTGTTGTTGGATT+TGG - chr4_1:7479933-7479952 None:intergenic 30.0%
!! TTTGGTTCTAAAGTTGTTGT+TGG - chr4_1:7479939-7479958 None:intergenic 30.0%
!!! TGAAAGGAAGAAGTTTTTTG+TGG - chr4_1:7479976-7479995 None:intergenic 30.0%
GAGTGAAACTAAAGTATGAA+AGG - chr4_1:7479992-7480011 None:intergenic 30.0%
GATAAAAACATTGTTGCCAT+TGG - chr4_1:7480020-7480039 None:intergenic 30.0%
TTGTGTTTGTTCTTGGTTTA+GGG - chr4_1:7480076-7480095 None:intergenic 30.0%
ATTGTGTTTGTTCTTGGTTT+AGG - chr4_1:7480077-7480096 None:intergenic 30.0%
! ACTCTTAATTCCCATGTTTT+TGG - chr4_1:7480176-7480195 None:intergenic 30.0%
ATATCACCTAATGTAAAAGG+TGG - chr4_1:7480287-7480306 None:intergenic 30.0%
AGCTATACCTAAACATTGTT+GGG + chr4_1:7480313-7480332 Msa0532910:CDS 30.0%
AATCTATGAGCTATGTTGTT+AGG + chr4_1:7480351-7480370 Msa0532910:CDS 30.0%
ATCTATGAGCTATGTTGTTA+GGG + chr4_1:7480352-7480371 Msa0532910:CDS 30.0%
! TTGCTGCTTATGTTAATAGT+TGG + chr4_1:7480405-7480424 Msa0532910:CDS 30.0%
!! TACTATTGGTTCAACCAATT+TGG + chr4_1:7480567-7480586 Msa0532910:intron 30.0%
TTTGCTCAATTATTATTGGC+TGG + chr4_1:7480622-7480641 Msa0532910:intron 30.0%
!!! ATGATTTTTTTTTCCCGGAT+AGG + chr4_1:7480857-7480876 Msa0532910:intron 30.0%
ATATTAACATCTTCCTATCC+GGG - chr4_1:7480873-7480892 None:intergenic 30.0%
GGATAATGCATATTATATGC+AGG + chr4_1:7480932-7480951 Msa0532910:intron 30.0%
! AATAATCATGTCTGGTGTTT+TGG + chr4_1:7481018-7481037 Msa0532910:intron 30.0%
!! TGGTGTTTTGGATATTTTAG+TGG + chr4_1:7481030-7481049 Msa0532910:intron 30.0%
!!! TTTGGATATTTTAGTGGTCA+TGG + chr4_1:7481036-7481055 Msa0532910:intron 30.0%
TAAACATACCATCCATGATA+TGG - chr4_1:7481129-7481148 None:intergenic 30.0%
AACAGTGAATATAAGCTTAC+CGG - chr4_1:7481318-7481337 None:intergenic 30.0%
TTACAACTTACAAGGTAGAA+AGG - chr4_1:7481703-7481722 None:intergenic 30.0%
GTTAGGTATTACAACTTACA+AGG - chr4_1:7481711-7481730 None:intergenic 30.0%
AGCAAAACATGTTCAAACTA+TGG - chr4_1:7481741-7481760 None:intergenic 30.0%
TTACATGCAATTACAAGTGT+CGG + chr4_1:7481856-7481875 Msa0532910:intron 30.0%
TTATTACCTCAACAGTATGT+TGG + chr4_1:7482056-7482075 Msa0532910:CDS 30.0%
! TGTAGGTTTAGGATTTGTAA+TGG + chr4_1:7482099-7482118 Msa0532910:CDS 30.0%
! GTAGGTTTAGGATTTGTAAT+GGG + chr4_1:7482100-7482119 Msa0532910:CDS 30.0%
TTCATGGTTAGAAAAAGTGA+TGG - chr4_1:7482178-7482197 None:intergenic 30.0%
!!! CACTTTTTCTAACCATGAAT+TGG + chr4_1:7482179-7482198 Msa0532910:intron 30.0%
AAAAAAAAGTGGCCAATTCA+TGG - chr4_1:7482194-7482213 None:intergenic 30.0%
!!! GCTTGGTTTTTTCTTTCTAT+CGG - chr4_1:7482430-7482449 None:intergenic 30.0%
! ATCTTTCATTTTGTATGGAC+AGG + chr4_1:7482578-7482597 Msa0532910:intron 30.0%
AATAACATCCATCATGACAT+TGG + chr4_1:7482657-7482676 Msa0532910:CDS 30.0%
! GTTTTGCTTATAATCAAGAG+CGG - chr4_1:7482774-7482793 None:intergenic 30.0%
TTACTTATATTCAAGACCAG+AGG + chr4_1:7483082-7483101 Msa0532910:intron 30.0%
ACCACTAAATCAAGATTAGA+CGG + chr4_1:7483146-7483165 Msa0532910:intron 30.0%
CCAAAAACAGAGTTGAAATA+TGG - chr4_1:7483174-7483193 None:intergenic 30.0%
! CCATATTTCAACTCTGTTTT+TGG + chr4_1:7483171-7483190 Msa0532910:intron 30.0%
TCATCAAGAATAGTGTAAAG+AGG - chr4_1:7483298-7483317 None:intergenic 30.0%
TTGTAATATCTTCCAAGAAC+TGG - chr4_1:7483388-7483407 None:intergenic 30.0%
! TACTCATTGATTGAAGCAAA+AGG + chr4_1:7483759-7483778 Msa0532910:three_prime_UTR 30.0%
!!! AGGAAGAAGTTTTTTGTGGA+GGG - chr4_1:7479972-7479991 None:intergenic 35.0%
!!! AAGGAAGAAGTTTTTTGTGG+AGG - chr4_1:7479973-7479992 None:intergenic 35.0%
! TAGATCTGAAGATACCCTTT+TGG - chr4_1:7480144-7480163 None:intergenic 35.0%
!! AAAGGGTATCTTCAGATCTA+AGG + chr4_1:7480144-7480163 Msa0532910:CDS 35.0%
AAGAAGAAGAAAAAGGTGGA+GGG + chr4_1:7480222-7480241 Msa0532910:CDS 35.0%
!! GAATTTCCAAATTTTGACCC+TGG + chr4_1:7480254-7480273 Msa0532910:CDS 35.0%
CAGCTATACCTAAACATTGT+TGG + chr4_1:7480312-7480331 Msa0532910:CDS 35.0%
ACCTAAACATTGTTGGGTTA+AGG + chr4_1:7480319-7480338 Msa0532910:CDS 35.0%
TCCTTAACCCAACAATGTTT+AGG - chr4_1:7480323-7480342 None:intergenic 35.0%
ACATAGCTCATAGATTTCCA+AGG - chr4_1:7480347-7480366 None:intergenic 35.0%
!!! TGTTGTTGTGGTTTTTGGTT+TGG + chr4_1:7480376-7480395 Msa0532910:CDS 35.0%
! GTTTGTTTGGCCACTTTATT+GGG + chr4_1:7480427-7480446 Msa0532910:CDS 35.0%
TCTTTGTTCTTGGTCATGAT+TGG + chr4_1:7480477-7480496 Msa0532910:CDS 35.0%
!!! ATTGGCTGGTATTTTTTTCC+TGG + chr4_1:7480636-7480655 Msa0532910:intron 35.0%
TCCTAAGTTAAACAGTGTTG+CGG + chr4_1:7481074-7481093 Msa0532910:CDS 35.0%
TCAATCCTAGTACCATATCA+TGG + chr4_1:7481114-7481133 Msa0532910:CDS 35.0%
CATGGATGGTATGTTTATGT+AGG + chr4_1:7481132-7481151 Msa0532910:intron 35.0%
AGAACACATCATCAAAACCA+TGG + chr4_1:7481264-7481283 Msa0532910:CDS 35.0%
ACAGTGAATATAAGCTTACC+GGG - chr4_1:7481317-7481336 None:intergenic 35.0%
CTATAACGCTATAGTGTAGT+GGG + chr4_1:7481427-7481446 Msa0532910:intron 35.0%
TAGCAGAAAATAGAGGTTAC+AGG - chr4_1:7481527-7481546 None:intergenic 35.0%
! AAGCTCTTGAAGATTTTCTC+TGG - chr4_1:7481625-7481644 None:intergenic 35.0%
AGAGAAAATCTTCAAGAGCT+TGG + chr4_1:7481624-7481643 Msa0532910:CDS 35.0%
TAGAAAGGATATGCAAGCAT+TGG - chr4_1:7481688-7481707 None:intergenic 35.0%
GGTGTATGAATTGATCTATG+AGG + chr4_1:7481770-7481789 Msa0532910:intron 35.0%
! ATGATGGTGTTTGAATTCAG+TGG + chr4_1:7481957-7481976 Msa0532910:intron 35.0%
GCACAAACAAGTCACTATTT+GGG - chr4_1:7482018-7482037 None:intergenic 35.0%
GGAATGGAATTTACCACATA+AGG - chr4_1:7482157-7482176 None:intergenic 35.0%
! GGTTAGAAAAAGTGATGGAA+TGG - chr4_1:7482173-7482192 None:intergenic 35.0%
! ACTTGAAGCTTTTTGTCATG+TGG + chr4_1:7482259-7482278 Msa0532910:intron 35.0%
! TTTTGTCATGTGGTTGGATT+TGG + chr4_1:7482269-7482288 Msa0532910:CDS 35.0%
! ACCATGGTAATTTGTCTTCA+TGG - chr4_1:7482317-7482336 None:intergenic 35.0%
AAACCAAGCCTTTACTCATT+TGG + chr4_1:7482441-7482460 Msa0532910:intron 35.0%
ATTCCAAATGAGTAAAGGCT+TGG - chr4_1:7482447-7482466 None:intergenic 35.0%
! TCATTTTGTATGGACAGGAA+TGG + chr4_1:7482583-7482602 Msa0532910:intron 35.0%
! CTTCAATTAAGTGGTAGTGT+GGG - chr4_1:7482716-7482735 None:intergenic 35.0%
TACTCACAGCTTCAATTAAG+TGG - chr4_1:7482725-7482744 None:intergenic 35.0%
CCACTAAATCAAGATTAGAC+GGG + chr4_1:7483147-7483166 Msa0532910:intron 35.0%
GGTAAAGGACTAGATTTCTT+TGG - chr4_1:7483415-7483434 None:intergenic 35.0%
!!! CTTCTCTCTTGTTTTACAAG+AGG - chr4_1:7483579-7483598 None:intergenic 35.0%
CAAATTGGACTGTTGTAACT+TGG + chr4_1:7483733-7483752 Msa0532910:three_prime_UTR 35.0%
!!! AGGAAGAAGTTTTTTGTGGA+GGG - chr4_1:7479972-7479991 None:intergenic 35.0%
!!! AAGGAAGAAGTTTTTTGTGG+AGG - chr4_1:7479973-7479992 None:intergenic 35.0%
! TAGATCTGAAGATACCCTTT+TGG - chr4_1:7480144-7480163 None:intergenic 35.0%
!! AAAGGGTATCTTCAGATCTA+AGG + chr4_1:7480144-7480163 Msa0532910:CDS 35.0%
AAGAAGAAGAAAAAGGTGGA+GGG + chr4_1:7480222-7480241 Msa0532910:CDS 35.0%
!! GAATTTCCAAATTTTGACCC+TGG + chr4_1:7480254-7480273 Msa0532910:CDS 35.0%
CAGCTATACCTAAACATTGT+TGG + chr4_1:7480312-7480331 Msa0532910:CDS 35.0%
ACCTAAACATTGTTGGGTTA+AGG + chr4_1:7480319-7480338 Msa0532910:CDS 35.0%
TCCTTAACCCAACAATGTTT+AGG - chr4_1:7480323-7480342 None:intergenic 35.0%
ACATAGCTCATAGATTTCCA+AGG - chr4_1:7480347-7480366 None:intergenic 35.0%
!!! TGTTGTTGTGGTTTTTGGTT+TGG + chr4_1:7480376-7480395 Msa0532910:CDS 35.0%
! GTTTGTTTGGCCACTTTATT+GGG + chr4_1:7480427-7480446 Msa0532910:CDS 35.0%
TCTTTGTTCTTGGTCATGAT+TGG + chr4_1:7480477-7480496 Msa0532910:CDS 35.0%
!!! ATTGGCTGGTATTTTTTTCC+TGG + chr4_1:7480636-7480655 Msa0532910:intron 35.0%
TCCTAAGTTAAACAGTGTTG+CGG + chr4_1:7481074-7481093 Msa0532910:CDS 35.0%
TCAATCCTAGTACCATATCA+TGG + chr4_1:7481114-7481133 Msa0532910:CDS 35.0%
CATGGATGGTATGTTTATGT+AGG + chr4_1:7481132-7481151 Msa0532910:intron 35.0%
AGAACACATCATCAAAACCA+TGG + chr4_1:7481264-7481283 Msa0532910:CDS 35.0%
ACAGTGAATATAAGCTTACC+GGG - chr4_1:7481317-7481336 None:intergenic 35.0%
CTATAACGCTATAGTGTAGT+GGG + chr4_1:7481427-7481446 Msa0532910:intron 35.0%
TAGCAGAAAATAGAGGTTAC+AGG - chr4_1:7481527-7481546 None:intergenic 35.0%
! AAGCTCTTGAAGATTTTCTC+TGG - chr4_1:7481625-7481644 None:intergenic 35.0%
AGAGAAAATCTTCAAGAGCT+TGG + chr4_1:7481624-7481643 Msa0532910:CDS 35.0%
TAGAAAGGATATGCAAGCAT+TGG - chr4_1:7481688-7481707 None:intergenic 35.0%
GGTGTATGAATTGATCTATG+AGG + chr4_1:7481770-7481789 Msa0532910:intron 35.0%
! ATGATGGTGTTTGAATTCAG+TGG + chr4_1:7481957-7481976 Msa0532910:intron 35.0%
GCACAAACAAGTCACTATTT+GGG - chr4_1:7482018-7482037 None:intergenic 35.0%
GGAATGGAATTTACCACATA+AGG - chr4_1:7482157-7482176 None:intergenic 35.0%
! GGTTAGAAAAAGTGATGGAA+TGG - chr4_1:7482173-7482192 None:intergenic 35.0%
! ACTTGAAGCTTTTTGTCATG+TGG + chr4_1:7482259-7482278 Msa0532910:intron 35.0%
! TTTTGTCATGTGGTTGGATT+TGG + chr4_1:7482269-7482288 Msa0532910:CDS 35.0%
! ACCATGGTAATTTGTCTTCA+TGG - chr4_1:7482317-7482336 None:intergenic 35.0%
AAACCAAGCCTTTACTCATT+TGG + chr4_1:7482441-7482460 Msa0532910:intron 35.0%
ATTCCAAATGAGTAAAGGCT+TGG - chr4_1:7482447-7482466 None:intergenic 35.0%
! TCATTTTGTATGGACAGGAA+TGG + chr4_1:7482583-7482602 Msa0532910:intron 35.0%
! CTTCAATTAAGTGGTAGTGT+GGG - chr4_1:7482716-7482735 None:intergenic 35.0%
TACTCACAGCTTCAATTAAG+TGG - chr4_1:7482725-7482744 None:intergenic 35.0%
CCACTAAATCAAGATTAGAC+GGG + chr4_1:7483147-7483166 Msa0532910:intron 35.0%
GGTAAAGGACTAGATTTCTT+TGG - chr4_1:7483415-7483434 None:intergenic 35.0%
!!! CTTCTCTCTTGTTTTACAAG+AGG - chr4_1:7483579-7483598 None:intergenic 35.0%
CAAATTGGACTGTTGTAACT+TGG + chr4_1:7483733-7483752 Msa0532910:three_prime_UTR 35.0%
!!! AAGAAGTTTTTTGTGGAGGG+TGG - chr4_1:7479969-7479988 None:intergenic 40.0%
TAGTTTCACTCACTCACCAA+TGG + chr4_1:7480001-7480020 Msa0532910:exon 40.0%
! GTTCTTGGTTTAGGGTACAA+TGG - chr4_1:7480068-7480087 None:intergenic 40.0%
GCAGAGGAAGAAGAAGAAAA+AGG + chr4_1:7480215-7480234 Msa0532910:CDS 40.0%
GAGGAAGAAGAAGAAAAAGG+TGG + chr4_1:7480218-7480237 Msa0532910:CDS 40.0%
GAAGAAGAAGAAAAAGGTGG+AGG + chr4_1:7480221-7480240 Msa0532910:CDS 40.0%
AGAAGAAGAAAAAGGTGGAG+GGG + chr4_1:7480223-7480242 Msa0532910:CDS 40.0%
TCACCTAATGTAAAAGGTGG+TGG - chr4_1:7480284-7480303 None:intergenic 40.0%
ATTGTTGGGTTAAGGATCCT+TGG + chr4_1:7480327-7480346 Msa0532910:CDS 40.0%
TGTTGTTAGGGATGTTGTTG+TGG + chr4_1:7480364-7480383 Msa0532910:CDS 40.0%
! AGGGATGTTGTTGTGGTTTT+TGG + chr4_1:7480371-7480390 Msa0532910:CDS 40.0%
! GGTTTGTTTGGCCACTTTAT+TGG + chr4_1:7480426-7480445 Msa0532910:CDS 40.0%
! TGCTCAAGGAACCATGTTTT+GGG + chr4_1:7480451-7480470 Msa0532910:CDS 40.0%
AACAAAGAGAGCCCAAAACA+TGG - chr4_1:7480465-7480484 None:intergenic 40.0%
! TTTTGGGCTCTCTTTGTTCT+TGG + chr4_1:7480467-7480486 Msa0532910:CDS 40.0%
AAAAGTCAAACTTTGCCACC+AGG - chr4_1:7480657-7480676 None:intergenic 40.0%
ACCAACTGAGTTAAGCTCAT+GGG - chr4_1:7480910-7480929 None:intergenic 40.0%
TACCAACTGAGTTAAGCTCA+TGG - chr4_1:7480911-7480930 None:intergenic 40.0%
ATGAGCTTAACTCAGTTGGT+AGG + chr4_1:7480910-7480929 Msa0532910:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+GGG + chr4_1:7480911-7480930 Msa0532910:intron 40.0%
TGCATATTATATGCAGGGGT+CGG + chr4_1:7480938-7480957 Msa0532910:intron 40.0%
CCTAAGTTAAACAGTGTTGC+GGG + chr4_1:7481075-7481094 Msa0532910:CDS 40.0%
CTAAGTTAAACAGTGTTGCG+GGG + chr4_1:7481076-7481095 Msa0532910:CDS 40.0%
TCCTAGTACCATATCATGGA+TGG + chr4_1:7481118-7481137 Msa0532910:CDS 40.0%
ACCATCCATGATATGGTACT+AGG - chr4_1:7481122-7481141 None:intergenic 40.0%
! GTGCGTTTTACTAATTGTGC+AGG + chr4_1:7481229-7481248 Msa0532910:intron 40.0%
! CATCATTTTCAACATGGCCA+TGG - chr4_1:7481284-7481303 None:intergenic 40.0%
AAATGATGAATCTTGGCACC+CGG + chr4_1:7481296-7481315 Msa0532910:CDS 40.0%
GCTATAACGCTATAGTGTAG+TGG + chr4_1:7481426-7481445 Msa0532910:intron 40.0%
!! GGATATGCAAGCATTGGAAA+AGG - chr4_1:7481682-7481701 None:intergenic 40.0%
GGCACAAACAAGTCACTATT+TGG - chr4_1:7482019-7482038 None:intergenic 40.0%
AACAGTATGTTGGACAGCTA+TGG + chr4_1:7482066-7482085 Msa0532910:CDS 40.0%
GCTTTATGGCATTCCTTATG+TGG + chr4_1:7482141-7482160 Msa0532910:CDS 40.0%
! GAAGCTTTTTGTCATGTGGT+TGG + chr4_1:7482263-7482282 Msa0532910:intron 40.0%
! GTAATTTGTCTTCATGGCCA+TGG - chr4_1:7482311-7482330 None:intergenic 40.0%
GCCATGAAGACAAATTACCA+TGG + chr4_1:7482313-7482332 Msa0532910:CDS 40.0%
GACAAATTACCATGGTATCG+TGG + chr4_1:7482321-7482340 Msa0532910:CDS 40.0%
CATGAGTTCCAATGTCATGA+TGG - chr4_1:7482668-7482687 None:intergenic 40.0%
! GCTTCAATTAAGTGGTAGTG+TGG - chr4_1:7482717-7482736 None:intergenic 40.0%
TGCTTATAATCAAGAGCGGA+CGG - chr4_1:7482770-7482789 None:intergenic 40.0%
CCCGTCTAATCTTGATTTAG+TGG - chr4_1:7483150-7483169 None:intergenic 40.0%
ACCGTCTGATCTTAATCCAA+CGG + chr4_1:7483221-7483240 Msa0532910:intron 40.0%
ACCGTTGGATTAAGATCAGA+CGG - chr4_1:7483225-7483244 None:intergenic 40.0%
TTCTTTCCTCTTGTAGACTG+AGG + chr4_1:7483354-7483373 Msa0532910:intron 40.0%
AAATCTCCAAGGAGGTGAAA+TGG - chr4_1:7483436-7483455 None:intergenic 40.0%
TAGAAGAGCCACTAAGGTTA+GGG - chr4_1:7483525-7483544 None:intergenic 40.0%
TTGATGTAGAAGAGCCACTA+AGG - chr4_1:7483531-7483550 None:intergenic 40.0%
TCCTCATAAGAAAAGGGAAG+AGG + chr4_1:7483703-7483722 Msa0532910:three_prime_UTR 40.0%
! ACCTCTTCCCTTTTCTTATG+AGG - chr4_1:7483707-7483726 None:intergenic 40.0%
!! GGAAGAGGTGCTTTACAAAT+TGG + chr4_1:7483718-7483737 Msa0532910:three_prime_UTR 40.0%
TGAAGGGAGTTATGTCTTCA+TGG + chr4_1:7483839-7483858 Msa0532910:three_prime_UTR 40.0%
CTTTGTCATGCACATTGTCA+AGG + chr4_1:7483955-7483974 Msa0532910:three_prime_UTR 40.0%
!!! AAGAAGTTTTTTGTGGAGGG+TGG - chr4_1:7479969-7479988 None:intergenic 40.0%
TAGTTTCACTCACTCACCAA+TGG + chr4_1:7480001-7480020 Msa0532910:exon 40.0%
! GTTCTTGGTTTAGGGTACAA+TGG - chr4_1:7480068-7480087 None:intergenic 40.0%
GCAGAGGAAGAAGAAGAAAA+AGG + chr4_1:7480215-7480234 Msa0532910:CDS 40.0%
GAGGAAGAAGAAGAAAAAGG+TGG + chr4_1:7480218-7480237 Msa0532910:CDS 40.0%
GAAGAAGAAGAAAAAGGTGG+AGG + chr4_1:7480221-7480240 Msa0532910:CDS 40.0%
AGAAGAAGAAAAAGGTGGAG+GGG + chr4_1:7480223-7480242 Msa0532910:CDS 40.0%
TCACCTAATGTAAAAGGTGG+TGG - chr4_1:7480284-7480303 None:intergenic 40.0%
ATTGTTGGGTTAAGGATCCT+TGG + chr4_1:7480327-7480346 Msa0532910:CDS 40.0%
TGTTGTTAGGGATGTTGTTG+TGG + chr4_1:7480364-7480383 Msa0532910:CDS 40.0%
! AGGGATGTTGTTGTGGTTTT+TGG + chr4_1:7480371-7480390 Msa0532910:CDS 40.0%
! GGTTTGTTTGGCCACTTTAT+TGG + chr4_1:7480426-7480445 Msa0532910:CDS 40.0%
! TGCTCAAGGAACCATGTTTT+GGG + chr4_1:7480451-7480470 Msa0532910:CDS 40.0%
AACAAAGAGAGCCCAAAACA+TGG - chr4_1:7480465-7480484 None:intergenic 40.0%
! TTTTGGGCTCTCTTTGTTCT+TGG + chr4_1:7480467-7480486 Msa0532910:CDS 40.0%
AAAAGTCAAACTTTGCCACC+AGG - chr4_1:7480657-7480676 None:intergenic 40.0%
ACCAACTGAGTTAAGCTCAT+GGG - chr4_1:7480910-7480929 None:intergenic 40.0%
TACCAACTGAGTTAAGCTCA+TGG - chr4_1:7480911-7480930 None:intergenic 40.0%
ATGAGCTTAACTCAGTTGGT+AGG + chr4_1:7480910-7480929 Msa0532910:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+GGG + chr4_1:7480911-7480930 Msa0532910:intron 40.0%
TGCATATTATATGCAGGGGT+CGG + chr4_1:7480938-7480957 Msa0532910:intron 40.0%
CCTAAGTTAAACAGTGTTGC+GGG + chr4_1:7481075-7481094 Msa0532910:CDS 40.0%
CTAAGTTAAACAGTGTTGCG+GGG + chr4_1:7481076-7481095 Msa0532910:CDS 40.0%
TCCTAGTACCATATCATGGA+TGG + chr4_1:7481118-7481137 Msa0532910:CDS 40.0%
ACCATCCATGATATGGTACT+AGG - chr4_1:7481122-7481141 None:intergenic 40.0%
! GTGCGTTTTACTAATTGTGC+AGG + chr4_1:7481229-7481248 Msa0532910:intron 40.0%
! CATCATTTTCAACATGGCCA+TGG - chr4_1:7481284-7481303 None:intergenic 40.0%
AAATGATGAATCTTGGCACC+CGG + chr4_1:7481296-7481315 Msa0532910:CDS 40.0%
GCTATAACGCTATAGTGTAG+TGG + chr4_1:7481426-7481445 Msa0532910:intron 40.0%
!! GGATATGCAAGCATTGGAAA+AGG - chr4_1:7481682-7481701 None:intergenic 40.0%
GGCACAAACAAGTCACTATT+TGG - chr4_1:7482019-7482038 None:intergenic 40.0%
AACAGTATGTTGGACAGCTA+TGG + chr4_1:7482066-7482085 Msa0532910:CDS 40.0%
GCTTTATGGCATTCCTTATG+TGG + chr4_1:7482141-7482160 Msa0532910:CDS 40.0%
! GAAGCTTTTTGTCATGTGGT+TGG + chr4_1:7482263-7482282 Msa0532910:intron 40.0%
! GTAATTTGTCTTCATGGCCA+TGG - chr4_1:7482311-7482330 None:intergenic 40.0%
GCCATGAAGACAAATTACCA+TGG + chr4_1:7482313-7482332 Msa0532910:CDS 40.0%
GACAAATTACCATGGTATCG+TGG + chr4_1:7482321-7482340 Msa0532910:CDS 40.0%
CATGAGTTCCAATGTCATGA+TGG - chr4_1:7482668-7482687 None:intergenic 40.0%
! GCTTCAATTAAGTGGTAGTG+TGG - chr4_1:7482717-7482736 None:intergenic 40.0%
TGCTTATAATCAAGAGCGGA+CGG - chr4_1:7482770-7482789 None:intergenic 40.0%
CCCGTCTAATCTTGATTTAG+TGG - chr4_1:7483150-7483169 None:intergenic 40.0%
ACCGTCTGATCTTAATCCAA+CGG + chr4_1:7483221-7483240 Msa0532910:intron 40.0%
ACCGTTGGATTAAGATCAGA+CGG - chr4_1:7483225-7483244 None:intergenic 40.0%
TTCTTTCCTCTTGTAGACTG+AGG + chr4_1:7483354-7483373 Msa0532910:intron 40.0%
AAATCTCCAAGGAGGTGAAA+TGG - chr4_1:7483436-7483455 None:intergenic 40.0%
TAGAAGAGCCACTAAGGTTA+GGG - chr4_1:7483525-7483544 None:intergenic 40.0%
TTGATGTAGAAGAGCCACTA+AGG - chr4_1:7483531-7483550 None:intergenic 40.0%
TCCTCATAAGAAAAGGGAAG+AGG + chr4_1:7483703-7483722 Msa0532910:three_prime_UTR 40.0%
! ACCTCTTCCCTTTTCTTATG+AGG - chr4_1:7483707-7483726 None:intergenic 40.0%
!! GGAAGAGGTGCTTTACAAAT+TGG + chr4_1:7483718-7483737 Msa0532910:three_prime_UTR 40.0%
TGAAGGGAGTTATGTCTTCA+TGG + chr4_1:7483839-7483858 Msa0532910:three_prime_UTR 40.0%
CTTTGTCATGCACATTGTCA+AGG + chr4_1:7483955-7483974 Msa0532910:three_prime_UTR 40.0%
!!! TTTTTTGTGGAGGGTGGTGT+TGG - chr4_1:7479963-7479982 None:intergenic 45.0%
! TTAGGGTACAATGGTGGAAG+TGG - chr4_1:7480059-7480078 None:intergenic 45.0%
! CTTGGTTTAGGGTACAATGG+TGG - chr4_1:7480065-7480084 None:intergenic 45.0%
TAAGAGTGAGTGCTCCTTCA+AGG + chr4_1:7480189-7480208 Msa0532910:CDS 45.0%
AAGAGTGAGTGCTCCTTCAA+GGG + chr4_1:7480190-7480209 Msa0532910:CDS 45.0%
! GCACCACCACCTTTTACATT+AGG + chr4_1:7480278-7480297 Msa0532910:CDS 45.0%
! CTGCTCAAGGAACCATGTTT+TGG + chr4_1:7480450-7480469 Msa0532910:CDS 45.0%
!!! GGCTGGTATTTTTTTCCTGG+TGG + chr4_1:7480639-7480658 Msa0532910:intron 45.0%
CCAACTGAGTTAAGCTCATG+GGG - chr4_1:7480909-7480928 None:intergenic 45.0%
GCATATTATATGCAGGGGTC+GGG + chr4_1:7480939-7480958 Msa0532910:intron 45.0%
CATATTATATGCAGGGGTCG+GGG + chr4_1:7480940-7480959 Msa0532910:intron 45.0%
! CCCGCAACACTGTTTAACTT+AGG - chr4_1:7481078-7481097 None:intergenic 45.0%
TCTCTGGCAACTGCAAGATT+TGG - chr4_1:7481609-7481628 None:intergenic 45.0%
!! AAGTGTCGGTGTTGAACACT+CGG + chr4_1:7481870-7481889 Msa0532910:intron 45.0%
TGTAGCACAGACACTTCAGA+TGG - chr4_1:7481905-7481924 None:intergenic 45.0%
GTGTTTGAATTCAGTGGAGC+AGG + chr4_1:7481963-7481982 Msa0532910:intron 45.0%
AGCTGTCCAACATACTGTTG+AGG - chr4_1:7482065-7482084 None:intergenic 45.0%
! GCTGCTTTGCTTGTAGGTTT+AGG + chr4_1:7482088-7482107 Msa0532910:CDS 45.0%
GTGACCTATTTGCATCACCA+TGG + chr4_1:7482291-7482310 Msa0532910:CDS 45.0%
! ATGGCCATGGTGATGCAAAT+AGG - chr4_1:7482298-7482317 None:intergenic 45.0%
ATTACCATGGTATCGTGGAC+AGG + chr4_1:7482326-7482345 Msa0532910:CDS 45.0%
ACAACTCTCGATCGTGACTA+TGG + chr4_1:7482627-7482646 Msa0532910:CDS 45.0%
! AAGTGGTAGTGTGGGATTTG+AGG - chr4_1:7482708-7482727 None:intergenic 45.0%
TAGAATCCAAACACTGCCTC+TGG - chr4_1:7483101-7483120 None:intergenic 45.0%
CAGTTACGCACATTTGACAC+AGG - chr4_1:7483260-7483279 None:intergenic 45.0%
CCAAGGAGGTGAAATGGTAA+AGG - chr4_1:7483430-7483449 None:intergenic 45.0%
CCTTTACCATTTCACCTCCT+TGG + chr4_1:7483427-7483446 Msa0532910:CDS 45.0%
! GACCATTTTGTCAGTGACAC+TGG + chr4_1:7483475-7483494 Msa0532910:CDS 45.0%
! CACCAGTGTCACTGACAAAA+TGG - chr4_1:7483480-7483499 None:intergenic 45.0%
CAAACAGACCCTAACCTTAG+TGG + chr4_1:7483514-7483533 Msa0532910:CDS 45.0%
GTAGAAGAGCCACTAAGGTT+AGG - chr4_1:7483526-7483545 None:intergenic 45.0%
CATGCACATTGTCAAGGTTG+TGG + chr4_1:7483961-7483980 Msa0532910:three_prime_UTR 45.0%
!!! TTTTTTGTGGAGGGTGGTGT+TGG - chr4_1:7479963-7479982 None:intergenic 45.0%
! TTAGGGTACAATGGTGGAAG+TGG - chr4_1:7480059-7480078 None:intergenic 45.0%
! CTTGGTTTAGGGTACAATGG+TGG - chr4_1:7480065-7480084 None:intergenic 45.0%
TAAGAGTGAGTGCTCCTTCA+AGG + chr4_1:7480189-7480208 Msa0532910:CDS 45.0%
AAGAGTGAGTGCTCCTTCAA+GGG + chr4_1:7480190-7480209 Msa0532910:CDS 45.0%
! GCACCACCACCTTTTACATT+AGG + chr4_1:7480278-7480297 Msa0532910:CDS 45.0%
! CTGCTCAAGGAACCATGTTT+TGG + chr4_1:7480450-7480469 Msa0532910:CDS 45.0%
!!! GGCTGGTATTTTTTTCCTGG+TGG + chr4_1:7480639-7480658 Msa0532910:intron 45.0%
CCAACTGAGTTAAGCTCATG+GGG - chr4_1:7480909-7480928 None:intergenic 45.0%
GCATATTATATGCAGGGGTC+GGG + chr4_1:7480939-7480958 Msa0532910:intron 45.0%
CATATTATATGCAGGGGTCG+GGG + chr4_1:7480940-7480959 Msa0532910:intron 45.0%
! CCCGCAACACTGTTTAACTT+AGG - chr4_1:7481078-7481097 None:intergenic 45.0%
TCTCTGGCAACTGCAAGATT+TGG - chr4_1:7481609-7481628 None:intergenic 45.0%
!! AAGTGTCGGTGTTGAACACT+CGG + chr4_1:7481870-7481889 Msa0532910:intron 45.0%
TGTAGCACAGACACTTCAGA+TGG - chr4_1:7481905-7481924 None:intergenic 45.0%
GTGTTTGAATTCAGTGGAGC+AGG + chr4_1:7481963-7481982 Msa0532910:intron 45.0%
AGCTGTCCAACATACTGTTG+AGG - chr4_1:7482065-7482084 None:intergenic 45.0%
! GCTGCTTTGCTTGTAGGTTT+AGG + chr4_1:7482088-7482107 Msa0532910:CDS 45.0%
GTGACCTATTTGCATCACCA+TGG + chr4_1:7482291-7482310 Msa0532910:CDS 45.0%
! ATGGCCATGGTGATGCAAAT+AGG - chr4_1:7482298-7482317 None:intergenic 45.0%
ATTACCATGGTATCGTGGAC+AGG + chr4_1:7482326-7482345 Msa0532910:CDS 45.0%
ACAACTCTCGATCGTGACTA+TGG + chr4_1:7482627-7482646 Msa0532910:CDS 45.0%
! AAGTGGTAGTGTGGGATTTG+AGG - chr4_1:7482708-7482727 None:intergenic 45.0%
TAGAATCCAAACACTGCCTC+TGG - chr4_1:7483101-7483120 None:intergenic 45.0%
CAGTTACGCACATTTGACAC+AGG - chr4_1:7483260-7483279 None:intergenic 45.0%
CCAAGGAGGTGAAATGGTAA+AGG - chr4_1:7483430-7483449 None:intergenic 45.0%
CCTTTACCATTTCACCTCCT+TGG + chr4_1:7483427-7483446 Msa0532910:CDS 45.0%
! GACCATTTTGTCAGTGACAC+TGG + chr4_1:7483475-7483494 Msa0532910:CDS 45.0%
! CACCAGTGTCACTGACAAAA+TGG - chr4_1:7483480-7483499 None:intergenic 45.0%
CAAACAGACCCTAACCTTAG+TGG + chr4_1:7483514-7483533 Msa0532910:CDS 45.0%
GTAGAAGAGCCACTAAGGTT+AGG - chr4_1:7483526-7483545 None:intergenic 45.0%
CATGCACATTGTCAAGGTTG+TGG + chr4_1:7483961-7483980 Msa0532910:three_prime_UTR 45.0%
TCTTCCTCTGCAACCCTTGA+AGG - chr4_1:7480206-7480225 None:intergenic 50.0%
AAAAGGTGGAGGGGTAGTTC+AGG + chr4_1:7480232-7480251 Msa0532910:CDS 50.0%
GGTGCACCAGGGTCAAAATT+TGG - chr4_1:7480263-7480282 None:intergenic 50.0%
! TAAAAGGTGGTGGTGCACCA+GGG - chr4_1:7480274-7480293 None:intergenic 50.0%
CCTTGAGCAGCCCAATAAAG+TGG - chr4_1:7480440-7480459 None:intergenic 50.0%
CCACTTTATTGGGCTGCTCA+AGG + chr4_1:7480437-7480456 Msa0532910:CDS 50.0%
CCCCATGAGCTTAACTCAGT+TGG + chr4_1:7480906-7480925 Msa0532910:intron 50.0%
ACTATAGCACTAGCGTGCAG+CGG + chr4_1:7481489-7481508 Msa0532910:intron 50.0%
AAGTGAGAACCACTCTTCCC+AGG - chr4_1:7481992-7482011 None:intergenic 50.0%
! GCTATGGCTGCTTTGCTTGT+AGG + chr4_1:7482082-7482101 Msa0532910:CDS 50.0%
GATACCTGTCCACGATACCA+TGG - chr4_1:7482333-7482352 None:intergenic 50.0%
CAGGAATGGAGCTACCTTAG+AGG + chr4_1:7482597-7482616 Msa0532910:intron 50.0%
GAATGGAGCTACCTTAGAGG+CGG + chr4_1:7482600-7482619 Msa0532910:CDS 50.0%
GAGTTGTAAGTCCGCCTCTA+AGG - chr4_1:7482614-7482633 None:intergenic 50.0%
TCAAGACCAGAGGCAGTGTT+TGG + chr4_1:7483092-7483111 Msa0532910:intron 50.0%
AGGCACGCTATCTTAACCGT+TGG - chr4_1:7483240-7483259 None:intergenic 50.0%
TAGCTGCCTCAGTCTACAAG+AGG - chr4_1:7483363-7483382 None:intergenic 50.0%
GAGGCAGCTAAACCAGTTCT+TGG + chr4_1:7483373-7483392 Msa0532910:CDS 50.0%
TCTTCCTCTGCAACCCTTGA+AGG - chr4_1:7480206-7480225 None:intergenic 50.0%
AAAAGGTGGAGGGGTAGTTC+AGG + chr4_1:7480232-7480251 Msa0532910:CDS 50.0%
GGTGCACCAGGGTCAAAATT+TGG - chr4_1:7480263-7480282 None:intergenic 50.0%
! TAAAAGGTGGTGGTGCACCA+GGG - chr4_1:7480274-7480293 None:intergenic 50.0%
CCTTGAGCAGCCCAATAAAG+TGG - chr4_1:7480440-7480459 None:intergenic 50.0%
CCACTTTATTGGGCTGCTCA+AGG + chr4_1:7480437-7480456 Msa0532910:CDS 50.0%
CCCCATGAGCTTAACTCAGT+TGG + chr4_1:7480906-7480925 Msa0532910:intron 50.0%
ACTATAGCACTAGCGTGCAG+CGG + chr4_1:7481489-7481508 Msa0532910:intron 50.0%
AAGTGAGAACCACTCTTCCC+AGG - chr4_1:7481992-7482011 None:intergenic 50.0%
! GCTATGGCTGCTTTGCTTGT+AGG + chr4_1:7482082-7482101 Msa0532910:CDS 50.0%
GATACCTGTCCACGATACCA+TGG - chr4_1:7482333-7482352 None:intergenic 50.0%
CAGGAATGGAGCTACCTTAG+AGG + chr4_1:7482597-7482616 Msa0532910:intron 50.0%
GAATGGAGCTACCTTAGAGG+CGG + chr4_1:7482600-7482619 Msa0532910:CDS 50.0%
GAGTTGTAAGTCCGCCTCTA+AGG - chr4_1:7482614-7482633 None:intergenic 50.0%
TCAAGACCAGAGGCAGTGTT+TGG + chr4_1:7483092-7483111 Msa0532910:intron 50.0%
AGGCACGCTATCTTAACCGT+TGG - chr4_1:7483240-7483259 None:intergenic 50.0%
TAGCTGCCTCAGTCTACAAG+AGG - chr4_1:7483363-7483382 None:intergenic 50.0%
GAGGCAGCTAAACCAGTTCT+TGG + chr4_1:7483373-7483392 Msa0532910:CDS 50.0%
! GTGGAGGGTGGTGTTGGATT+TGG - chr4_1:7479957-7479976 None:intergenic 55.0%
TGCTCCTTCAAGGGTTGCAG+AGG + chr4_1:7480199-7480218 Msa0532910:CDS 55.0%
! GTAAAAGGTGGTGGTGCACC+AGG - chr4_1:7480275-7480294 None:intergenic 55.0%
ATTCAGTGGAGCAGGAGTCC+TGG + chr4_1:7481971-7481990 Msa0532910:intron 55.0%
TTCAGTGGAGCAGGAGTCCT+GGG + chr4_1:7481972-7481991 Msa0532910:intron 55.0%
! GTGGAGGGTGGTGTTGGATT+TGG - chr4_1:7479957-7479976 None:intergenic 55.0%
TGCTCCTTCAAGGGTTGCAG+AGG + chr4_1:7480199-7480218 Msa0532910:CDS 55.0%
! GTAAAAGGTGGTGGTGCACC+AGG - chr4_1:7480275-7480294 None:intergenic 55.0%
ATTCAGTGGAGCAGGAGTCC+TGG + chr4_1:7481971-7481990 Msa0532910:intron 55.0%
TTCAGTGGAGCAGGAGTCCT+GGG + chr4_1:7481972-7481991 Msa0532910:intron 55.0%
AGCAGGAGTCCTGGGAAGAG+TGG + chr4_1:7481980-7481999 Msa0532910:CDS 60.0%
AGCAGGAGTCCTGGGAAGAG+TGG + chr4_1:7481980-7481999 Msa0532910:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 7479917 7484012 7479917 ID=Msa0532910;Name=Msa0532910
chr4_1 mRNA 7479917 7484012 7479917 ID=Msa0532910-mRNA-1;Parent=Msa0532910;Name=Msa0532910-mRNA-1;_AED=0.05;_eAED=0.05;_QI=103|1|1|1|1|1|8|457|439
chr4_1 exon 7479917 7480498 7479917 ID=Msa0532910-mRNA-1:exon:2550;Parent=Msa0532910-mRNA-1
chr4_1 exon 7481050 7481139 7481050 ID=Msa0532910-mRNA-1:exon:2551;Parent=Msa0532910-mRNA-1
chr4_1 exon 7481251 7481317 7481251 ID=Msa0532910-mRNA-1:exon:2552;Parent=Msa0532910-mRNA-1
chr4_1 exon 7481619 7481711 7481619 ID=Msa0532910-mRNA-1:exon:2553;Parent=Msa0532910-mRNA-1
chr4_1 exon 7481977 7482162 7481977 ID=Msa0532910-mRNA-1:exon:2554;Parent=Msa0532910-mRNA-1
chr4_1 exon 7482267 7482347 7482267 ID=Msa0532910-mRNA-1:exon:2555;Parent=Msa0532910-mRNA-1
chr4_1 exon 7482600 7482737 7482600 ID=Msa0532910-mRNA-1:exon:2556;Parent=Msa0532910-mRNA-1
chr4_1 exon 7483370 7484012 7483370 ID=Msa0532910-mRNA-1:exon:2557;Parent=Msa0532910-mRNA-1
chr4_1 five_prime_UTR 7479917 7480019 7479917 ID=Msa0532910-mRNA-1:five_prime_utr;Parent=Msa0532910-mRNA-1
chr4_1 CDS 7480020 7480498 7480020 ID=Msa0532910-mRNA-1:cds;Parent=Msa0532910-mRNA-1
chr4_1 CDS 7481050 7481139 7481050 ID=Msa0532910-mRNA-1:cds;Parent=Msa0532910-mRNA-1
chr4_1 CDS 7481251 7481317 7481251 ID=Msa0532910-mRNA-1:cds;Parent=Msa0532910-mRNA-1
chr4_1 CDS 7481619 7481711 7481619 ID=Msa0532910-mRNA-1:cds;Parent=Msa0532910-mRNA-1
chr4_1 CDS 7481977 7482162 7481977 ID=Msa0532910-mRNA-1:cds;Parent=Msa0532910-mRNA-1
chr4_1 CDS 7482267 7482347 7482267 ID=Msa0532910-mRNA-1:cds;Parent=Msa0532910-mRNA-1
chr4_1 CDS 7482600 7482737 7482600 ID=Msa0532910-mRNA-1:cds;Parent=Msa0532910-mRNA-1
chr4_1 CDS 7483370 7483555 7483370 ID=Msa0532910-mRNA-1:cds;Parent=Msa0532910-mRNA-1
chr4_1 three_prime_UTR 7483556 7484012 7483556 ID=Msa0532910-mRNA-1:three_prime_utr;Parent=Msa0532910-mRNA-1
Gene Sequence

>Msa0532910

ATGGCAACAATGTTTTTATCAGAATGTGGCTTAAGACCACTTCCACCATTGTACCCTAAACCAAGAACAAACACAATTTCATTACAAAAACCTTCAAAGATTAGATTTTTAAGCAAAACAACCAAAAGGGTATCTTCAGATCTAAGGTTTAAACCAAAAACATGGGAATTAAGAGTGAGTGCTCCTTCAAGGGTTGCAGAGGAAGAAGAAGAAAAAGGTGGAGGGGTAGTTCAGGAATTTCCAAATTTTGACCCTGGTGCACCACCACCTTTTACATTAGGTGATATAAGAGCAGCTATACCTAAACATTGTTGGGTTAAGGATCCTTGGAAATCTATGAGCTATGTTGTTAGGGATGTTGTTGTGGTTTTTGGTTTGGCTGTTGTTGCTGCTTATGTTAATAGTTGGTTTGTTTGGCCACTTTATTGGGCTGCTCAAGGAACCATGTTTTGGGCTCTCTTTGTTCTTGGTCATGATTGTGGTCATGGAAGCTTTTCAAACAATCCTAAGTTAAACAGTGTTGCGGGGCATTTGCTGCATTCATCAATCCTAGTACCATATCATGGATGGAGAATTAGTCATAGAACACATCATCAAAACCATGGCCATGTTGAAAATGATGAATCTTGGCACCCGTTGCCAGAGAAAATCTTCAAGAGCTTGGACAATGCAACAAAAATGTTAAGATTTACAATACCTTTTCCAATGCTTGCATATCCTTTCTACCTTTGGAGCAGGAGTCCTGGGAAGAGTGGTTCTCACTTTGACCCAAATAGTGACTTGTTTGTGCCAAATGAGAGAAAAGATGTTATTACCTCAACAGTATGTTGGACAGCTATGGCTGCTTTGCTTGTAGGTTTAGGATTTGTAATGGGTCCAATTCAATTACTCAAGCTTTATGGCATTCCTTATGTGCTTTTTGTCATGTGGTTGGATTTGGTGACCTATTTGCATCACCATGGCCATGAAGACAAATTACCATGGTATCGTGGACAGGAATGGAGCTACCTTAGAGGCGGACTTACAACTCTCGATCGTGACTATGGATTGATAAATAACATCCATCATGACATTGGAACTCATGTCATTCATCACTTATTTCCTCAAATCCCACACTACCACTTAATTGAAGCTACTGAGGCAGCTAAACCAGTTCTTGGAAGATATTACAAAGAGCCAAAGAAATCTAGTCCTTTACCATTTCACCTCCTTGGAGATTTAATAAAAAGCATGAAAAAAGACCATTTTGTCAGTGACACTGGTGATATTGTTTACTATCAAACAGACCCTAACCTTAGTGGCTCTTCTACATCAAAATAA

Protein sequence

>Msa0532910

MATMFLSECGLRPLPPLYPKPRTNTISLQKPSKIRFLSKTTKRVSSDLRFKPKTWELRVSAPSRVAEEEEEKGGGVVQEFPNFDPGAPPPFTLGDIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAVVAAYVNSWFVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFKSLDNATKMLRFTIPFPMLAYPFYLWSRSPGKSGSHFDPNSDLFVPNERKDVITSTVCWTAMAALLVGLGFVMGPIQLLKLYGIPYVLFVMWLDLVTYLHHHGHEDKLPWYRGQEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGRYYKEPKKSSPLPFHLLGDLIKSMKKDHFVSDTGDIVYYQTDPNLSGSSTSK*