AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1425570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1425570 MtrunA17_Chr4g0006241 97.955 440 8 1 1 439 1 440 0.0 889
Msa1425570 MtrunA17_Chr7g0242601 74.273 447 106 2 1 439 1 446 0.0 690
Msa1425570 MtrunA17_Chr5g0430241 68.617 376 110 1 65 432 10 385 0.0 555
Msa1425570 MtrunA17_Chr3g0105171 71.508 358 102 0 82 439 26 383 0.0 540
Msa1425570 MtrunA17_Chr1g0175301 38.509 322 180 5 85 390 26 345 2.26e-68 222
Msa1425570 MtrunA17_Chr7g0258651 36.932 352 193 8 58 391 6 346 3.19e-65 214
Msa1425570 MtrunA17_Chr1g0210511 37.826 230 132 4 171 391 14 241 1.24e-40 146
Msa1425570 MtrunA17_Chr4g0074071 29.118 340 215 12 62 392 75 397 3.50e-33 130
Msa1425570 MtrunA17_Chr2g0305881 32.624 141 91 3 60 198 70 208 8.83e-16 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1425570 AT5G05580.1 74.208 442 102 4 1 437 1 435 0.0 680
Msa1425570 AT3G11170.1 71.493 442 117 2 1 435 1 440 0.0 650
Msa1425570 AT5G05580.2 73.506 385 90 4 1 380 1 378 0.0 586
Msa1425570 AT2G29980.1 68.766 381 119 0 59 439 2 382 0.0 556
Msa1425570 AT2G29980.2 67.153 274 90 0 59 332 2 275 2.19e-134 388
Msa1425570 AT3G12120.1 37.654 324 182 8 85 391 25 345 5.63e-67 219
Msa1425570 AT3G12120.2 37.654 324 182 8 85 391 25 345 5.63e-67 219
Msa1425570 AT4G30950.1 29.586 338 215 12 59 389 74 395 1.44e-31 125

Find 118 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCAATTACTCAAGCTTTA+TGG 0.136027 tig0025867:+57286 Msa1425570:CDS
GGCACAAACAAGTCACTATT+TGG 0.140954 tig0025867:-57175 None:intergenic
CTGCTCAAGGAACCATGTTT+TGG 0.171359 tig0025867:+55609 Msa1425570:CDS
GGTTTGTTTGGCCACTTTAT+TGG 0.187935 tig0025867:+55585 Msa1425570:CDS
ATTTCACTCTTAATATTTAT+AGG 0.191977 tig0025867:-58837 None:intergenic
GCTATGGCTGCTTTGCTTGT+AGG 0.251364 tig0025867:+57241 Msa1425570:CDS
TTGTGTTTGTTCTTGGTTTA+GGG 0.253549 tig0025867:-55232 None:intergenic
CTTATATCACCTAATGTAAA+AGG 0.263942 tig0025867:-55446 None:intergenic
GGTGCACCAGGGTCAAAATT+TGG 0.265489 tig0025867:-55419 None:intergenic
AATGAAATTGTGTTTGTTCT+TGG 0.270224 tig0025867:-55239 None:intergenic
GTGGAGGGTGGTGTTGGATT+TGG 0.274206 tig0025867:-55113 None:intergenic
ATTGTGTTTGTTCTTGGTTT+AGG 0.275137 tig0025867:-55233 None:intergenic
GCTGCTTTGCTTGTAGGTTT+AGG 0.278162 tig0025867:+57247 Msa1425570:CDS
AATCTATGAGCTATGTTGTT+AGG 0.285313 tig0025867:+55510 Msa1425570:CDS
GGTAAAGGACTAGATTTCTT+TGG 0.287183 tig0025867:-58571 None:intergenic
GGAAGAGGTGCTTTACAAAT+TGG 0.287961 tig0025867:+58877 Msa1425570:three_prime_UTR
TCTTCCTCTGCAACCCTTGA+AGG 0.290001 tig0025867:-55362 None:intergenic
GTTTGTTTGGCCACTTTATT+GGG 0.291498 tig0025867:+55586 Msa1425570:CDS
TCTAAAGTTGTTGTTGGATT+TGG 0.310519 tig0025867:-55089 None:intergenic
AAAGGGTATCTTCAGATCTA+AGG 0.313778 tig0025867:+55303 Msa1425570:CDS
AAAAGGTGGAGGGGTAGTTC+AGG 0.318396 tig0025867:+55391 Msa1425570:CDS
ATGTTAATAGTTGGTTTGTT+TGG 0.321832 tig0025867:+55573 Msa1425570:CDS
ACCATGGTAATTTGTCTTCA+TGG 0.346135 tig0025867:-57473 None:intergenic
TCTTTGTTCTTGGTCATGAT+TGG 0.352865 tig0025867:+55636 Msa1425570:CDS
CACCAGTGTCACTGACAAAA+TGG 0.361992 tig0025867:-58636 None:intergenic
ACCTAAACATTGTTGGGTTA+AGG 0.363933 tig0025867:+55478 Msa1425570:CDS
GCAGAGGAAGAAGAAGAAAA+AGG 0.365509 tig0025867:+55374 Msa1425570:CDS
TAGATCTGAAGATACCCTTT+TGG 0.370698 tig0025867:-55300 None:intergenic
GAGGCAGCTAAACCAGTTCT+TGG 0.371883 tig0025867:+58532 Msa1425570:CDS
TTGTAATATCTTCCAAGAAC+TGG 0.377558 tig0025867:-58544 None:intergenic
TAAACATACCATCCATGATA+TGG 0.377797 tig0025867:-56285 None:intergenic
ACAACTCTCGATCGTGACTA+TGG 0.378968 tig0025867:+57786 Msa1425570:CDS
ATTGAGTGATTATTATTGAA+TGG 0.380102 tig0025867:+59054 Msa1425570:three_prime_UTR
CCTAAGTTAAACAGTGTTGC+GGG 0.381423 tig0025867:+56234 Msa1425570:CDS
CAGCTATACCTAAACATTGT+TGG 0.384073 tig0025867:+55471 Msa1425570:CDS
TAAAGCTTGAGTAATTGAAT+TGG 0.388459 tig0025867:-57283 None:intergenic
GTAGAAGAGCCACTAAGGTT+AGG 0.394730 tig0025867:-58682 None:intergenic
CAGGAATGGAGCTACCTTAG+AGG 0.397812 tig0025867:+57756 Msa1425570:intron
GAGTTGTAAGTCCGCCTCTA+AGG 0.398628 tig0025867:-57770 None:intergenic
ATTGTTGGGTTAAGGATCCT+TGG 0.399359 tig0025867:+55486 Msa1425570:CDS
AAGTGGTAGTGTGGGATTTG+AGG 0.405657 tig0025867:-57864 None:intergenic
CCTTTACCATTTCACCTCCT+TGG 0.406643 tig0025867:+58586 Msa1425570:CDS
TCCTTAACCCAACAATGTTT+AGG 0.408115 tig0025867:-55479 None:intergenic
TGAAGGGAGTTATGTCTTCA+TGG 0.410198 tig0025867:+58998 Msa1425570:three_prime_UTR
TTTGGTTCTAAAGTTGTTGT+TGG 0.413285 tig0025867:-55095 None:intergenic
TTGCTGCTTATGTTAATAGT+TGG 0.419399 tig0025867:+55564 Msa1425570:CDS
GTAGGTTTAGGATTTGTAAT+GGG 0.420064 tig0025867:+57259 Msa1425570:CDS
AGCTATACCTAAACATTGTT+GGG 0.420218 tig0025867:+55472 Msa1425570:CDS
GGAATGGAATTTACCACATA+AGG 0.420459 tig0025867:-57313 None:intergenic
TGTAGGTTTAGGATTTGTAA+TGG 0.421486 tig0025867:+57258 Msa1425570:CDS
TAAGAGTGAGTGCTCCTTCA+AGG 0.422040 tig0025867:+55348 Msa1425570:CDS
AAATCTCCAAGGAGGTGAAA+TGG 0.440919 tig0025867:-58592 None:intergenic
GCTTTATGGCATTCCTTATG+TGG 0.442119 tig0025867:+57300 Msa1425570:CDS
GTAAAAGGTGGTGGTGCACC+AGG 0.442471 tig0025867:-55431 None:intergenic
CAAACAGACCCTAACCTTAG+TGG 0.442623 tig0025867:+58673 Msa1425570:CDS
ATGGCCATGGTGATGCAAAT+AGG 0.454958 tig0025867:-57454 None:intergenic
GCACAAACAAGTCACTATTT+GGG 0.459556 tig0025867:-57174 None:intergenic
ATCTATGAGCTATGTTGTTA+GGG 0.462681 tig0025867:+55511 Msa1425570:CDS
GTGTTTGAATTCAGTGGAGC+AGG 0.468799 tig0025867:+57122 Msa1425570:intron
CATGCACATTGTCAAGGTTG+TGG 0.469530 tig0025867:+59120 Msa1425570:three_prime_UTR
AAATTGTTTATTCTTGATGA+AGG 0.474936 tig0025867:+58981 Msa1425570:three_prime_UTR
AGAGAAAATCTTCAAGAGCT+TGG 0.481339 tig0025867:+56783 Msa1425570:CDS
CAAATTGGACTGTTGTAACT+TGG 0.483581 tig0025867:+58892 Msa1425570:three_prime_UTR
CCCGCAACACTGTTTAACTT+AGG 0.489628 tig0025867:-56234 None:intergenic
TACTCACAGCTTCAATTAAG+TGG 0.489994 tig0025867:-57881 None:intergenic
TAGAAGAGCCACTAAGGTTA+GGG 0.494714 tig0025867:-58681 None:intergenic
TTCAGTGGAGCAGGAGTCCT+GGG 0.495423 tig0025867:+57131 Msa1425570:intron
ATTCAGTGGAGCAGGAGTCC+TGG 0.502823 tig0025867:+57130 Msa1425570:intron
TTTAAGCAAAACAACCAAAA+GGG 0.507525 tig0025867:+55286 Msa1425570:CDS
TGTTGTTAGGGATGTTGTTG+TGG 0.508034 tig0025867:+55523 Msa1425570:CDS
TCCTCATAAGAAAAGGGAAG+AGG 0.511687 tig0025867:+58862 Msa1425570:three_prime_UTR
TAGAAAGGATATGCAAGCAT+TGG 0.513379 tig0025867:-56844 None:intergenic
TTGATGTAGAAGAGCCACTA+AGG 0.513464 tig0025867:-58687 None:intergenic
AAGTGAGAACCACTCTTCCC+AGG 0.513601 tig0025867:-57148 None:intergenic
CTTTGTCATGCACATTGTCA+AGG 0.515814 tig0025867:+59114 Msa1425570:three_prime_UTR
CCACTTTATTGGGCTGCTCA+AGG 0.516126 tig0025867:+55596 Msa1425570:CDS
GGATATGCAAGCATTGGAAA+AGG 0.516624 tig0025867:-56838 None:intergenic
TTATTACCTCAACAGTATGT+TGG 0.518216 tig0025867:+57215 Msa1425570:CDS
GAGTGAAACTAAAGTATGAA+AGG 0.518890 tig0025867:-55148 None:intergenic
GTTCTTGGTTTAGGGTACAA+TGG 0.520187 tig0025867:-55224 None:intergenic
TTACAACTTACAAGGTAGAA+AGG 0.522153 tig0025867:-56859 None:intergenic
TTAGGGTACAATGGTGGAAG+TGG 0.522625 tig0025867:-55215 None:intergenic
ACCATCCATGATATGGTACT+AGG 0.523521 tig0025867:-56278 None:intergenic
TCAATCCTAGTACCATATCA+TGG 0.529822 tig0025867:+56273 Msa1425570:CDS
AACAGTATGTTGGACAGCTA+TGG 0.530932 tig0025867:+57225 Msa1425570:CDS
TACTCATTGATTGAAGCAAA+AGG 0.534663 tig0025867:+58918 Msa1425570:three_prime_UTR
AATTGTTTATTCTTGATGAA+GGG 0.541167 tig0025867:+58982 Msa1425570:three_prime_UTR
AATAACATCCATCATGACAT+TGG 0.543696 tig0025867:+57816 Msa1425570:CDS
TGCTCCTTCAAGGGTTGCAG+AGG 0.544094 tig0025867:+55358 Msa1425570:CDS
ATTACCATGGTATCGTGGAC+AGG 0.548527 tig0025867:+57485 Msa1425570:CDS
CCAAGGAGGTGAAATGGTAA+AGG 0.549624 tig0025867:-58586 None:intergenic
ATGTTGAAAATGATGAATCT+TGG 0.550797 tig0025867:+56448 Msa1425570:CDS
AAGAGTGAGTGCTCCTTCAA+GGG 0.557691 tig0025867:+55349 Msa1425570:CDS
TCACCTAATGTAAAAGGTGG+TGG 0.560118 tig0025867:-55440 None:intergenic
CTTCAATTAAGTGGTAGTGT+GGG 0.565641 tig0025867:-57872 None:intergenic
TCCTAGTACCATATCATGGA+TGG 0.566773 tig0025867:+56277 Msa1425570:CDS
TCCTAAGTTAAACAGTGTTG+CGG 0.570080 tig0025867:+56233 Msa1425570:CDS
GCTTCAATTAAGTGGTAGTG+TGG 0.575416 tig0025867:-57873 None:intergenic
TAGTTTCACTCACTCACCAA+TGG 0.576236 tig0025867:+55160 Msa1425570:exon
CCTTGAGCAGCCCAATAAAG+TGG 0.583743 tig0025867:-55596 None:intergenic
CATGAGTTCCAATGTCATGA+TGG 0.588288 tig0025867:-57824 None:intergenic
AGCAGGAGTCCTGGGAAGAG+TGG 0.590625 tig0025867:+57139 Msa1425570:CDS
GTGACCTATTTGCATCACCA+TGG 0.611816 tig0025867:+57450 Msa1425570:CDS
ATATCACCTAATGTAAAAGG+TGG 0.614456 tig0025867:-55443 None:intergenic
CATATGACATATGAATTATG+TGG 0.619695 tig0025867:-58758 None:intergenic
AACAAAGAGAGCCCAAAACA+TGG 0.628713 tig0025867:-55621 None:intergenic
GACAAATTACCATGGTATCG+TGG 0.635203 tig0025867:+57480 Msa1425570:CDS
ACATAGCTCATAGATTTCCA+AGG 0.638388 tig0025867:-55503 None:intergenic
GTAATTTGTCTTCATGGCCA+TGG 0.639785 tig0025867:-57467 None:intergenic
GATACCTGTCCACGATACCA+TGG 0.640882 tig0025867:-57489 None:intergenic
AAATGATGAATCTTGGCACC+CGG 0.642419 tig0025867:+56455 Msa1425570:CDS
CTTGGTTTAGGGTACAATGG+TGG 0.643600 tig0025867:-55221 None:intergenic
AGCTGTCCAACATACTGTTG+AGG 0.647019 tig0025867:-57221 None:intergenic
GAATGGAGCTACCTTAGAGG+CGG 0.680144 tig0025867:+57759 Msa1425570:CDS
AGAACACATCATCAAAACCA+TGG 0.681922 tig0025867:+56423 Msa1425570:CDS
TAAAAGGTGGTGGTGCACCA+GGG 0.683201 tig0025867:-55430 None:intergenic
CTAAGTTAAACAGTGTTGCG+GGG 0.690117 tig0025867:+56235 Msa1425570:CDS
GCCATGAAGACAAATTACCA+TGG 0.707625 tig0025867:+57472 Msa1425570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTATCATAATATAAAC+TGG - tig0025867:56159-56178 None:intergenic 10.0%
!! CTAAAAATAGATTAAAATAA+AGG - tig0025867:57566-57585 None:intergenic 10.0%
!! TAAATTAATAGTATTAATCA+CGG - tig0025867:57989-58008 None:intergenic 10.0%
!! TTAATTATCATAATATAAAC+TGG - tig0025867:56159-56178 None:intergenic 10.0%
!! CTAAAAATAGATTAAAATAA+AGG - tig0025867:57566-57585 None:intergenic 10.0%
!! TAAATTAATAGTATTAATCA+CGG - tig0025867:57989-58008 None:intergenic 10.0%
!!! AAATATGGTATTTTTATTCT+TGG + tig0025867:55857-55876 Msa1425570:intron 15.0%
!! TGAACAAAAATTAACATTAA+AGG - tig0025867:55939-55958 None:intergenic 15.0%
!! AAAAAAGAGTTAAAAAAAAG+TGG - tig0025867:57364-57383 None:intergenic 15.0%
!! AAATTAATAGTATTAATCAC+GGG - tig0025867:57988-58007 None:intergenic 15.0%
!! TTAATACTATTAATTTACCT+TGG + tig0025867:57992-58011 Msa1425570:intron 15.0%
!! TAATACTATTAATTTACCTT+GGG + tig0025867:57993-58012 Msa1425570:intron 15.0%
!!! TAGTATATTTATGGTATTTT+AGG + tig0025867:58144-58163 Msa1425570:intron 15.0%
!! ATTTCACTCTTAATATTTAT+AGG - tig0025867:58840-58859 None:intergenic 15.0%
!!! AAATATGGTATTTTTATTCT+TGG + tig0025867:55857-55876 Msa1425570:intron 15.0%
!! TGAACAAAAATTAACATTAA+AGG - tig0025867:55939-55958 None:intergenic 15.0%
!! AAAAAAGAGTTAAAAAAAAG+TGG - tig0025867:57364-57383 None:intergenic 15.0%
!! AAATTAATAGTATTAATCAC+GGG - tig0025867:57988-58007 None:intergenic 15.0%
!! TTAATACTATTAATTTACCT+TGG + tig0025867:57992-58011 Msa1425570:intron 15.0%
!! TAATACTATTAATTTACCTT+GGG + tig0025867:57993-58012 Msa1425570:intron 15.0%
!!! TAGTATATTTATGGTATTTT+AGG + tig0025867:58144-58163 Msa1425570:intron 15.0%
!! ATTTCACTCTTAATATTTAT+AGG - tig0025867:58840-58859 None:intergenic 15.0%
!! CTTAAAAATCTAATCTTTGA+AGG - tig0025867:55272-55291 None:intergenic 20.0%
!! GAACTGAAAATCAATATTAA+AGG - tig0025867:55703-55722 None:intergenic 20.0%
!! TAAAGAAAAAACAACCAAAT+TGG - tig0025867:55743-55762 None:intergenic 20.0%
!!! GATTTTTGCTCAATTATTAT+TGG + tig0025867:55777-55796 Msa1425570:intron 20.0%
!! GCTATGATAATTGATAAATA+TGG + tig0025867:55842-55861 Msa1425570:intron 20.0%
!! TAGGTTGTTATAAATACTAA+TGG + tig0025867:55886-55905 Msa1425570:intron 20.0%
!!! TGTTGATTTTTTTTTCTTAG+TGG + tig0025867:55968-55987 Msa1425570:intron 20.0%
!!! TTTTGATGATTTTTTTTTCC+CGG + tig0025867:56011-56030 Msa1425570:intron 20.0%
!! TGATAATTAATAATCATGTC+TGG + tig0025867:56169-56188 Msa1425570:intron 20.0%
!! AAGTTTCTTATATGAAATCA+TGG - tig0025867:56526-56545 None:intergenic 20.0%
!!! TTTTTAAATAACTGCTAAAG+CGG + tig0025867:56561-56580 Msa1425570:intron 20.0%
!!! CTATTTCACAACATTTTTAA+TGG - tig0025867:56626-56645 None:intergenic 20.0%
!!! AGATTTGGAATTAAATGTAA+TGG - tig0025867:56753-56772 None:intergenic 20.0%
!! TTGTTAATCTTATCTTATGA+TGG + tig0025867:57100-57119 Msa1425570:intron 20.0%
!! AGAATTTATAAGGAAAAGAA+TGG - tig0025867:57520-57539 None:intergenic 20.0%
!! ATTTGATGAGAGAATTTATA+AGG - tig0025867:57530-57549 None:intergenic 20.0%
!! AATTTATTCCAAATGAGTAA+AGG - tig0025867:57611-57630 None:intergenic 20.0%
!!! AAGTTTATTTCTTGTTTATG+TGG + tig0025867:57676-57695 Msa1425570:intron 20.0%
!! AGCTTAAAGTAGTATATTTA+TGG + tig0025867:58135-58154 Msa1425570:intron 20.0%
!!! AATTTGATGATATTTAAGAC+TGG + tig0025867:58199-58218 Msa1425570:intron 20.0%
!! TTGATGAATGAATAATTGAA+TGG + tig0025867:58470-58489 Msa1425570:intron 20.0%
!!! AAATTTTCCTCATAAGAAAA+GGG + tig0025867:58856-58875 Msa1425570:three_prime_UTR 20.0%
!! AAATTGTTTATTCTTGATGA+AGG + tig0025867:58981-59000 Msa1425570:three_prime_UTR 20.0%
!! AATTGTTTATTCTTGATGAA+GGG + tig0025867:58982-59001 Msa1425570:three_prime_UTR 20.0%
!!! AATAATCACTCAATTTTTTG+AGG - tig0025867:59048-59067 None:intergenic 20.0%
!! ATTGAGTGATTATTATTGAA+TGG + tig0025867:59054-59073 Msa1425570:three_prime_UTR 20.0%
!! CTTAAAAATCTAATCTTTGA+AGG - tig0025867:55272-55291 None:intergenic 20.0%
!! GAACTGAAAATCAATATTAA+AGG - tig0025867:55703-55722 None:intergenic 20.0%
!! TAAAGAAAAAACAACCAAAT+TGG - tig0025867:55743-55762 None:intergenic 20.0%
!!! GATTTTTGCTCAATTATTAT+TGG + tig0025867:55777-55796 Msa1425570:intron 20.0%
!! GCTATGATAATTGATAAATA+TGG + tig0025867:55842-55861 Msa1425570:intron 20.0%
!! TAGGTTGTTATAAATACTAA+TGG + tig0025867:55886-55905 Msa1425570:intron 20.0%
!!! TGTTGATTTTTTTTTCTTAG+TGG + tig0025867:55968-55987 Msa1425570:intron 20.0%
!!! TTTTGATGATTTTTTTTTCC+CGG + tig0025867:56011-56030 Msa1425570:intron 20.0%
!! TGATAATTAATAATCATGTC+TGG + tig0025867:56169-56188 Msa1425570:intron 20.0%
!! AAGTTTCTTATATGAAATCA+TGG - tig0025867:56526-56545 None:intergenic 20.0%
!!! TTTTTAAATAACTGCTAAAG+CGG + tig0025867:56561-56580 Msa1425570:intron 20.0%
!!! CTATTTCACAACATTTTTAA+TGG - tig0025867:56626-56645 None:intergenic 20.0%
!!! AGATTTGGAATTAAATGTAA+TGG - tig0025867:56753-56772 None:intergenic 20.0%
!! TTGTTAATCTTATCTTATGA+TGG + tig0025867:57100-57119 Msa1425570:intron 20.0%
!! AGAATTTATAAGGAAAAGAA+TGG - tig0025867:57520-57539 None:intergenic 20.0%
!! ATTTGATGAGAGAATTTATA+AGG - tig0025867:57530-57549 None:intergenic 20.0%
!! AATTTATTCCAAATGAGTAA+AGG - tig0025867:57611-57630 None:intergenic 20.0%
!!! AAGTTTATTTCTTGTTTATG+TGG + tig0025867:57676-57695 Msa1425570:intron 20.0%
!! AGCTTAAAGTAGTATATTTA+TGG + tig0025867:58135-58154 Msa1425570:intron 20.0%
!!! AATTTGATGATATTTAAGAC+TGG + tig0025867:58199-58218 Msa1425570:intron 20.0%
!! TTGATGAATGAATAATTGAA+TGG + tig0025867:58470-58489 Msa1425570:intron 20.0%
!!! AAATTTTCCTCATAAGAAAA+GGG + tig0025867:58856-58875 Msa1425570:three_prime_UTR 20.0%
!! AAATTGTTTATTCTTGATGA+AGG + tig0025867:58981-59000 Msa1425570:three_prime_UTR 20.0%
!! AATTGTTTATTCTTGATGAA+GGG + tig0025867:58982-59001 Msa1425570:three_prime_UTR 20.0%
!!! AATAATCACTCAATTTTTTG+AGG - tig0025867:59048-59067 None:intergenic 20.0%
!! ATTGAGTGATTATTATTGAA+TGG + tig0025867:59054-59073 Msa1425570:three_prime_UTR 20.0%
!!! ACAATGTTTTTATCAGAATG+TGG + tig0025867:55185-55204 Msa1425570:CDS 25.0%
! AATGAAATTGTGTTTGTTCT+TGG - tig0025867:55242-55261 None:intergenic 25.0%
!! TTTTAAGCAAAACAACCAAA+AGG + tig0025867:55285-55304 Msa1425570:CDS 25.0%
! TTTAAGCAAAACAACCAAAA+GGG + tig0025867:55286-55305 Msa1425570:CDS 25.0%
! TAAGGTTTAAACCAAAAACA+TGG + tig0025867:55321-55340 Msa1425570:CDS 25.0%
! AAGGTTTAAACCAAAAACAT+GGG + tig0025867:55322-55341 Msa1425570:CDS 25.0%
! CTTATATCACCTAATGTAAA+AGG - tig0025867:55449-55468 None:intergenic 25.0%
!!! ATGTTAATAGTTGGTTTGTT+TGG + tig0025867:55573-55592 Msa1425570:CDS 25.0%
!! ATTTTCAGTTCAGTTACTAT+TGG + tig0025867:55712-55731 Msa1425570:intron 25.0%
!! TTTTTATTCTTGGTCATGAT+AGG + tig0025867:55867-55886 Msa1425570:intron 25.0%
! ACATAACAGATAGACTAAAT+TGG - tig0025867:55912-55931 None:intergenic 25.0%
! TATATTAACATCTTCCTATC+CGG - tig0025867:56033-56052 None:intergenic 25.0%
! GATAATGCATATTATATGCA+GGG + tig0025867:56092-56111 Msa1425570:intron 25.0%
! ATAATGCATATTATATGCAG+GGG + tig0025867:56093-56112 Msa1425570:intron 25.0%
!! AAGATTCATCATTTTCAACA+TGG - tig0025867:56449-56468 None:intergenic 25.0%
! ATGTTGAAAATGATGAATCT+TGG + tig0025867:56448-56467 Msa1425570:CDS 25.0%
!!! ATATTCACTGTTCTAGTTTA+TGG + tig0025867:56485-56504 Msa1425570:intron 25.0%
! TATCAAATAGCAGAAAATAG+AGG - tig0025867:56693-56712 None:intergenic 25.0%
! CAAACTATGGTAAAATAGTT+AGG - tig0025867:56887-56906 None:intergenic 25.0%
!!! ACATGTTTTGCTATTAGTTA+TGG + tig0025867:56908-56927 Msa1425570:intron 25.0%
!! TATTTTCAGTGTTTACATGT+CGG - tig0025867:56975-56994 None:intergenic 25.0%
!! ATAACATCTTTTCTCTCATT+TGG - tig0025867:57199-57218 None:intergenic 25.0%
! TAAAGCTTGAGTAATTGAAT+TGG - tig0025867:57286-57305 None:intergenic 25.0%
! ATTCAATTACTCAAGCTTTA+TGG + tig0025867:57286-57305 Msa1425570:CDS 25.0%
! GGAATAAATTTAGAAGCAAT+TGG + tig0025867:57621-57640 Msa1425570:intron 25.0%
!! GCTTTATCTTTCATTTTGTA+TGG + tig0025867:57732-57751 Msa1425570:intron 25.0%
! CGGGTATATTTGAAAAAAAT+AGG - tig0025867:57969-57988 None:intergenic 25.0%
!!! ACTTTAATTTTTATCTCCCA+AGG - tig0025867:58012-58031 None:intergenic 25.0%
! TGGGAGATAAAAATTAAAGT+TGG + tig0025867:58012-58031 Msa1425570:intron 25.0%
! GGGAGATAAAAATTAAAGTT+GGG + tig0025867:58013-58032 Msa1425570:intron 25.0%
!!! TATAAACACGAGAGTATTTT+CGG + tig0025867:58040-58059 Msa1425570:intron 25.0%
!! TAATGTGACTATTTTGTGTA+TGG - tig0025867:58071-58090 None:intergenic 25.0%
! CAAAAACAGAGTTGAAATAT+GGG - tig0025867:58332-58351 None:intergenic 25.0%
!! TTTTTATTAAATCTCCAAGG+AGG - tig0025867:58603-58622 None:intergenic 25.0%
!!! TGCTTTTTATTAAATCTCCA+AGG - tig0025867:58606-58625 None:intergenic 25.0%
! CATATGACATATGAATTATG+TGG - tig0025867:58761-58780 None:intergenic 25.0%
!! GAAATTTTCCTCATAAGAAA+AGG + tig0025867:58855-58874 Msa1425570:three_prime_UTR 25.0%
! ACTCTTGAAAAATACATAAG+TGG - tig0025867:59148-59167 None:intergenic 25.0%
!!! ACTTATGTATTTTTCAAGAG+TGG + tig0025867:59147-59166 Msa1425570:three_prime_UTR 25.0%
!!! ACAATGTTTTTATCAGAATG+TGG + tig0025867:55185-55204 Msa1425570:CDS 25.0%
! AATGAAATTGTGTTTGTTCT+TGG - tig0025867:55242-55261 None:intergenic 25.0%
!! TTTTAAGCAAAACAACCAAA+AGG + tig0025867:55285-55304 Msa1425570:CDS 25.0%
! TTTAAGCAAAACAACCAAAA+GGG + tig0025867:55286-55305 Msa1425570:CDS 25.0%
! TAAGGTTTAAACCAAAAACA+TGG + tig0025867:55321-55340 Msa1425570:CDS 25.0%
! AAGGTTTAAACCAAAAACAT+GGG + tig0025867:55322-55341 Msa1425570:CDS 25.0%
! CTTATATCACCTAATGTAAA+AGG - tig0025867:55449-55468 None:intergenic 25.0%
!!! ATGTTAATAGTTGGTTTGTT+TGG + tig0025867:55573-55592 Msa1425570:CDS 25.0%
!! ATTTTCAGTTCAGTTACTAT+TGG + tig0025867:55712-55731 Msa1425570:intron 25.0%
!! TTTTTATTCTTGGTCATGAT+AGG + tig0025867:55867-55886 Msa1425570:intron 25.0%
! ACATAACAGATAGACTAAAT+TGG - tig0025867:55912-55931 None:intergenic 25.0%
! TATATTAACATCTTCCTATC+CGG - tig0025867:56033-56052 None:intergenic 25.0%
! GATAATGCATATTATATGCA+GGG + tig0025867:56092-56111 Msa1425570:intron 25.0%
! ATAATGCATATTATATGCAG+GGG + tig0025867:56093-56112 Msa1425570:intron 25.0%
!! AAGATTCATCATTTTCAACA+TGG - tig0025867:56449-56468 None:intergenic 25.0%
! ATGTTGAAAATGATGAATCT+TGG + tig0025867:56448-56467 Msa1425570:CDS 25.0%
!!! ATATTCACTGTTCTAGTTTA+TGG + tig0025867:56485-56504 Msa1425570:intron 25.0%
! TATCAAATAGCAGAAAATAG+AGG - tig0025867:56693-56712 None:intergenic 25.0%
! CAAACTATGGTAAAATAGTT+AGG - tig0025867:56887-56906 None:intergenic 25.0%
!!! ACATGTTTTGCTATTAGTTA+TGG + tig0025867:56908-56927 Msa1425570:intron 25.0%
!! TATTTTCAGTGTTTACATGT+CGG - tig0025867:56975-56994 None:intergenic 25.0%
!! ATAACATCTTTTCTCTCATT+TGG - tig0025867:57199-57218 None:intergenic 25.0%
! TAAAGCTTGAGTAATTGAAT+TGG - tig0025867:57286-57305 None:intergenic 25.0%
! ATTCAATTACTCAAGCTTTA+TGG + tig0025867:57286-57305 Msa1425570:CDS 25.0%
! GGAATAAATTTAGAAGCAAT+TGG + tig0025867:57621-57640 Msa1425570:intron 25.0%
!! GCTTTATCTTTCATTTTGTA+TGG + tig0025867:57732-57751 Msa1425570:intron 25.0%
! CGGGTATATTTGAAAAAAAT+AGG - tig0025867:57969-57988 None:intergenic 25.0%
!!! ACTTTAATTTTTATCTCCCA+AGG - tig0025867:58012-58031 None:intergenic 25.0%
! TGGGAGATAAAAATTAAAGT+TGG + tig0025867:58012-58031 Msa1425570:intron 25.0%
! GGGAGATAAAAATTAAAGTT+GGG + tig0025867:58013-58032 Msa1425570:intron 25.0%
!!! TATAAACACGAGAGTATTTT+CGG + tig0025867:58040-58059 Msa1425570:intron 25.0%
!! TAATGTGACTATTTTGTGTA+TGG - tig0025867:58071-58090 None:intergenic 25.0%
! CAAAAACAGAGTTGAAATAT+GGG - tig0025867:58332-58351 None:intergenic 25.0%
!! TTTTTATTAAATCTCCAAGG+AGG - tig0025867:58603-58622 None:intergenic 25.0%
!!! TGCTTTTTATTAAATCTCCA+AGG - tig0025867:58606-58625 None:intergenic 25.0%
! CATATGACATATGAATTATG+TGG - tig0025867:58761-58780 None:intergenic 25.0%
!! GAAATTTTCCTCATAAGAAA+AGG + tig0025867:58855-58874 Msa1425570:three_prime_UTR 25.0%
! ACTCTTGAAAAATACATAAG+TGG - tig0025867:59148-59167 None:intergenic 25.0%
!!! ACTTATGTATTTTTCAAGAG+TGG + tig0025867:59147-59166 Msa1425570:three_prime_UTR 25.0%
! TCTAAAGTTGTTGTTGGATT+TGG - tig0025867:55092-55111 None:intergenic 30.0%
!! TTTGGTTCTAAAGTTGTTGT+TGG - tig0025867:55098-55117 None:intergenic 30.0%
!!! TGAAAGGAAGAAGTTTTTTG+TGG - tig0025867:55135-55154 None:intergenic 30.0%
GAGTGAAACTAAAGTATGAA+AGG - tig0025867:55151-55170 None:intergenic 30.0%
GATAAAAACATTGTTGCCAT+TGG - tig0025867:55179-55198 None:intergenic 30.0%
TTGTGTTTGTTCTTGGTTTA+GGG - tig0025867:55235-55254 None:intergenic 30.0%
ATTGTGTTTGTTCTTGGTTT+AGG - tig0025867:55236-55255 None:intergenic 30.0%
! ACTCTTAATTCCCATGTTTT+TGG - tig0025867:55335-55354 None:intergenic 30.0%
ATATCACCTAATGTAAAAGG+TGG - tig0025867:55446-55465 None:intergenic 30.0%
AGCTATACCTAAACATTGTT+GGG + tig0025867:55472-55491 Msa1425570:CDS 30.0%
AATCTATGAGCTATGTTGTT+AGG + tig0025867:55510-55529 Msa1425570:CDS 30.0%
ATCTATGAGCTATGTTGTTA+GGG + tig0025867:55511-55530 Msa1425570:CDS 30.0%
! TTGCTGCTTATGTTAATAGT+TGG + tig0025867:55564-55583 Msa1425570:CDS 30.0%
!! TACTATTGGTTCAACCAATT+TGG + tig0025867:55726-55745 Msa1425570:intron 30.0%
TTTGCTCAATTATTATTGGC+TGG + tig0025867:55781-55800 Msa1425570:intron 30.0%
!!! ATGATTTTTTTTTCCCGGAT+AGG + tig0025867:56016-56035 Msa1425570:intron 30.0%
ATATTAACATCTTCCTATCC+GGG - tig0025867:56032-56051 None:intergenic 30.0%
GGATAATGCATATTATATGC+AGG + tig0025867:56091-56110 Msa1425570:intron 30.0%
! AATAATCATGTCTGGTGTTT+TGG + tig0025867:56177-56196 Msa1425570:intron 30.0%
!! TGGTGTTTTGGATATTTTAG+TGG + tig0025867:56189-56208 Msa1425570:intron 30.0%
!!! TTTGGATATTTTAGTGGTCA+TGG + tig0025867:56195-56214 Msa1425570:intron 30.0%
TAAACATACCATCCATGATA+TGG - tig0025867:56288-56307 None:intergenic 30.0%
AACAGTGAATATAAGCTTAC+CGG - tig0025867:56477-56496 None:intergenic 30.0%
TTACAACTTACAAGGTAGAA+AGG - tig0025867:56862-56881 None:intergenic 30.0%
GTTAGGTATTACAACTTACA+AGG - tig0025867:56870-56889 None:intergenic 30.0%
AGCAAAACATGTTCAAACTA+TGG - tig0025867:56900-56919 None:intergenic 30.0%
TTACATGCAATTACAAGTGT+CGG + tig0025867:57015-57034 Msa1425570:intron 30.0%
TTATTACCTCAACAGTATGT+TGG + tig0025867:57215-57234 Msa1425570:CDS 30.0%
! TGTAGGTTTAGGATTTGTAA+TGG + tig0025867:57258-57277 Msa1425570:CDS 30.0%
! GTAGGTTTAGGATTTGTAAT+GGG + tig0025867:57259-57278 Msa1425570:CDS 30.0%
TTCATGGTTAGAAAAAGTGA+TGG - tig0025867:57337-57356 None:intergenic 30.0%
!!! CACTTTTTCTAACCATGAAT+TGG + tig0025867:57338-57357 Msa1425570:intron 30.0%
AAAAAAAAGTGGCCAATTCA+TGG - tig0025867:57353-57372 None:intergenic 30.0%
!!! GCTTGGTTTTTTCTTTCTAT+CGG - tig0025867:57589-57608 None:intergenic 30.0%
! ATCTTTCATTTTGTATGGAC+AGG + tig0025867:57737-57756 Msa1425570:intron 30.0%
AATAACATCCATCATGACAT+TGG + tig0025867:57816-57835 Msa1425570:CDS 30.0%
! GTTTTGCTTATAATCAAGAG+CGG - tig0025867:57933-57952 None:intergenic 30.0%
TTACTTATATTCAAGACCAG+AGG + tig0025867:58241-58260 Msa1425570:intron 30.0%
ACCACTAAATCAAGATTAGA+CGG + tig0025867:58305-58324 Msa1425570:intron 30.0%
CCAAAAACAGAGTTGAAATA+TGG - tig0025867:58333-58352 None:intergenic 30.0%
! CCATATTTCAACTCTGTTTT+TGG + tig0025867:58330-58349 Msa1425570:intron 30.0%
TCATCAAGAATAGTGTAAAG+AGG - tig0025867:58457-58476 None:intergenic 30.0%
TTGTAATATCTTCCAAGAAC+TGG - tig0025867:58547-58566 None:intergenic 30.0%
! TACTCATTGATTGAAGCAAA+AGG + tig0025867:58918-58937 Msa1425570:three_prime_UTR 30.0%
! TCTAAAGTTGTTGTTGGATT+TGG - tig0025867:55092-55111 None:intergenic 30.0%
!! TTTGGTTCTAAAGTTGTTGT+TGG - tig0025867:55098-55117 None:intergenic 30.0%
!!! TGAAAGGAAGAAGTTTTTTG+TGG - tig0025867:55135-55154 None:intergenic 30.0%
GAGTGAAACTAAAGTATGAA+AGG - tig0025867:55151-55170 None:intergenic 30.0%
GATAAAAACATTGTTGCCAT+TGG - tig0025867:55179-55198 None:intergenic 30.0%
TTGTGTTTGTTCTTGGTTTA+GGG - tig0025867:55235-55254 None:intergenic 30.0%
ATTGTGTTTGTTCTTGGTTT+AGG - tig0025867:55236-55255 None:intergenic 30.0%
! ACTCTTAATTCCCATGTTTT+TGG - tig0025867:55335-55354 None:intergenic 30.0%
ATATCACCTAATGTAAAAGG+TGG - tig0025867:55446-55465 None:intergenic 30.0%
AGCTATACCTAAACATTGTT+GGG + tig0025867:55472-55491 Msa1425570:CDS 30.0%
AATCTATGAGCTATGTTGTT+AGG + tig0025867:55510-55529 Msa1425570:CDS 30.0%
ATCTATGAGCTATGTTGTTA+GGG + tig0025867:55511-55530 Msa1425570:CDS 30.0%
! TTGCTGCTTATGTTAATAGT+TGG + tig0025867:55564-55583 Msa1425570:CDS 30.0%
!! TACTATTGGTTCAACCAATT+TGG + tig0025867:55726-55745 Msa1425570:intron 30.0%
TTTGCTCAATTATTATTGGC+TGG + tig0025867:55781-55800 Msa1425570:intron 30.0%
!!! ATGATTTTTTTTTCCCGGAT+AGG + tig0025867:56016-56035 Msa1425570:intron 30.0%
ATATTAACATCTTCCTATCC+GGG - tig0025867:56032-56051 None:intergenic 30.0%
GGATAATGCATATTATATGC+AGG + tig0025867:56091-56110 Msa1425570:intron 30.0%
! AATAATCATGTCTGGTGTTT+TGG + tig0025867:56177-56196 Msa1425570:intron 30.0%
!! TGGTGTTTTGGATATTTTAG+TGG + tig0025867:56189-56208 Msa1425570:intron 30.0%
!!! TTTGGATATTTTAGTGGTCA+TGG + tig0025867:56195-56214 Msa1425570:intron 30.0%
TAAACATACCATCCATGATA+TGG - tig0025867:56288-56307 None:intergenic 30.0%
AACAGTGAATATAAGCTTAC+CGG - tig0025867:56477-56496 None:intergenic 30.0%
TTACAACTTACAAGGTAGAA+AGG - tig0025867:56862-56881 None:intergenic 30.0%
GTTAGGTATTACAACTTACA+AGG - tig0025867:56870-56889 None:intergenic 30.0%
AGCAAAACATGTTCAAACTA+TGG - tig0025867:56900-56919 None:intergenic 30.0%
TTACATGCAATTACAAGTGT+CGG + tig0025867:57015-57034 Msa1425570:intron 30.0%
TTATTACCTCAACAGTATGT+TGG + tig0025867:57215-57234 Msa1425570:CDS 30.0%
! TGTAGGTTTAGGATTTGTAA+TGG + tig0025867:57258-57277 Msa1425570:CDS 30.0%
! GTAGGTTTAGGATTTGTAAT+GGG + tig0025867:57259-57278 Msa1425570:CDS 30.0%
TTCATGGTTAGAAAAAGTGA+TGG - tig0025867:57337-57356 None:intergenic 30.0%
!!! CACTTTTTCTAACCATGAAT+TGG + tig0025867:57338-57357 Msa1425570:intron 30.0%
AAAAAAAAGTGGCCAATTCA+TGG - tig0025867:57353-57372 None:intergenic 30.0%
!!! GCTTGGTTTTTTCTTTCTAT+CGG - tig0025867:57589-57608 None:intergenic 30.0%
! ATCTTTCATTTTGTATGGAC+AGG + tig0025867:57737-57756 Msa1425570:intron 30.0%
AATAACATCCATCATGACAT+TGG + tig0025867:57816-57835 Msa1425570:CDS 30.0%
! GTTTTGCTTATAATCAAGAG+CGG - tig0025867:57933-57952 None:intergenic 30.0%
TTACTTATATTCAAGACCAG+AGG + tig0025867:58241-58260 Msa1425570:intron 30.0%
ACCACTAAATCAAGATTAGA+CGG + tig0025867:58305-58324 Msa1425570:intron 30.0%
CCAAAAACAGAGTTGAAATA+TGG - tig0025867:58333-58352 None:intergenic 30.0%
! CCATATTTCAACTCTGTTTT+TGG + tig0025867:58330-58349 Msa1425570:intron 30.0%
TCATCAAGAATAGTGTAAAG+AGG - tig0025867:58457-58476 None:intergenic 30.0%
TTGTAATATCTTCCAAGAAC+TGG - tig0025867:58547-58566 None:intergenic 30.0%
! TACTCATTGATTGAAGCAAA+AGG + tig0025867:58918-58937 Msa1425570:three_prime_UTR 30.0%
!!! AGGAAGAAGTTTTTTGTGGA+GGG - tig0025867:55131-55150 None:intergenic 35.0%
!!! AAGGAAGAAGTTTTTTGTGG+AGG - tig0025867:55132-55151 None:intergenic 35.0%
! TAGATCTGAAGATACCCTTT+TGG - tig0025867:55303-55322 None:intergenic 35.0%
!! AAAGGGTATCTTCAGATCTA+AGG + tig0025867:55303-55322 Msa1425570:CDS 35.0%
AAGAAGAAGAAAAAGGTGGA+GGG + tig0025867:55381-55400 Msa1425570:CDS 35.0%
!! GAATTTCCAAATTTTGACCC+TGG + tig0025867:55413-55432 Msa1425570:CDS 35.0%
CAGCTATACCTAAACATTGT+TGG + tig0025867:55471-55490 Msa1425570:CDS 35.0%
ACCTAAACATTGTTGGGTTA+AGG + tig0025867:55478-55497 Msa1425570:CDS 35.0%
TCCTTAACCCAACAATGTTT+AGG - tig0025867:55482-55501 None:intergenic 35.0%
ACATAGCTCATAGATTTCCA+AGG - tig0025867:55506-55525 None:intergenic 35.0%
!!! TGTTGTTGTGGTTTTTGGTT+TGG + tig0025867:55535-55554 Msa1425570:CDS 35.0%
! GTTTGTTTGGCCACTTTATT+GGG + tig0025867:55586-55605 Msa1425570:CDS 35.0%
TCTTTGTTCTTGGTCATGAT+TGG + tig0025867:55636-55655 Msa1425570:CDS 35.0%
!!! ATTGGCTGGTATTTTTTTCC+TGG + tig0025867:55795-55814 Msa1425570:intron 35.0%
TCCTAAGTTAAACAGTGTTG+CGG + tig0025867:56233-56252 Msa1425570:CDS 35.0%
TCAATCCTAGTACCATATCA+TGG + tig0025867:56273-56292 Msa1425570:CDS 35.0%
CATGGATGGTATGTTTATGT+AGG + tig0025867:56291-56310 Msa1425570:intron 35.0%
AGAACACATCATCAAAACCA+TGG + tig0025867:56423-56442 Msa1425570:CDS 35.0%
ACAGTGAATATAAGCTTACC+GGG - tig0025867:56476-56495 None:intergenic 35.0%
CTATAACGCTATAGTGTAGT+GGG + tig0025867:56586-56605 Msa1425570:intron 35.0%
TAGCAGAAAATAGAGGTTAC+AGG - tig0025867:56686-56705 None:intergenic 35.0%
! AAGCTCTTGAAGATTTTCTC+TGG - tig0025867:56784-56803 None:intergenic 35.0%
AGAGAAAATCTTCAAGAGCT+TGG + tig0025867:56783-56802 Msa1425570:CDS 35.0%
TAGAAAGGATATGCAAGCAT+TGG - tig0025867:56847-56866 None:intergenic 35.0%
GGTGTATGAATTGATCTATG+AGG + tig0025867:56929-56948 Msa1425570:intron 35.0%
! ATGATGGTGTTTGAATTCAG+TGG + tig0025867:57116-57135 Msa1425570:intron 35.0%
GCACAAACAAGTCACTATTT+GGG - tig0025867:57177-57196 None:intergenic 35.0%
GGAATGGAATTTACCACATA+AGG - tig0025867:57316-57335 None:intergenic 35.0%
! GGTTAGAAAAAGTGATGGAA+TGG - tig0025867:57332-57351 None:intergenic 35.0%
! ACTTGAAGCTTTTTGTCATG+TGG + tig0025867:57418-57437 Msa1425570:intron 35.0%
! TTTTGTCATGTGGTTGGATT+TGG + tig0025867:57428-57447 Msa1425570:CDS 35.0%
! ACCATGGTAATTTGTCTTCA+TGG - tig0025867:57476-57495 None:intergenic 35.0%
AAACCAAGCCTTTACTCATT+TGG + tig0025867:57600-57619 Msa1425570:intron 35.0%
ATTCCAAATGAGTAAAGGCT+TGG - tig0025867:57606-57625 None:intergenic 35.0%
! TCATTTTGTATGGACAGGAA+TGG + tig0025867:57742-57761 Msa1425570:intron 35.0%
! CTTCAATTAAGTGGTAGTGT+GGG - tig0025867:57875-57894 None:intergenic 35.0%
TACTCACAGCTTCAATTAAG+TGG - tig0025867:57884-57903 None:intergenic 35.0%
CCACTAAATCAAGATTAGAC+GGG + tig0025867:58306-58325 Msa1425570:intron 35.0%
GGTAAAGGACTAGATTTCTT+TGG - tig0025867:58574-58593 None:intergenic 35.0%
!!! CTTCTCTCTTGTTTTACAAG+AGG - tig0025867:58738-58757 None:intergenic 35.0%
CAAATTGGACTGTTGTAACT+TGG + tig0025867:58892-58911 Msa1425570:three_prime_UTR 35.0%
!!! AGGAAGAAGTTTTTTGTGGA+GGG - tig0025867:55131-55150 None:intergenic 35.0%
!!! AAGGAAGAAGTTTTTTGTGG+AGG - tig0025867:55132-55151 None:intergenic 35.0%
! TAGATCTGAAGATACCCTTT+TGG - tig0025867:55303-55322 None:intergenic 35.0%
!! AAAGGGTATCTTCAGATCTA+AGG + tig0025867:55303-55322 Msa1425570:CDS 35.0%
AAGAAGAAGAAAAAGGTGGA+GGG + tig0025867:55381-55400 Msa1425570:CDS 35.0%
!! GAATTTCCAAATTTTGACCC+TGG + tig0025867:55413-55432 Msa1425570:CDS 35.0%
CAGCTATACCTAAACATTGT+TGG + tig0025867:55471-55490 Msa1425570:CDS 35.0%
ACCTAAACATTGTTGGGTTA+AGG + tig0025867:55478-55497 Msa1425570:CDS 35.0%
TCCTTAACCCAACAATGTTT+AGG - tig0025867:55482-55501 None:intergenic 35.0%
ACATAGCTCATAGATTTCCA+AGG - tig0025867:55506-55525 None:intergenic 35.0%
!!! TGTTGTTGTGGTTTTTGGTT+TGG + tig0025867:55535-55554 Msa1425570:CDS 35.0%
! GTTTGTTTGGCCACTTTATT+GGG + tig0025867:55586-55605 Msa1425570:CDS 35.0%
TCTTTGTTCTTGGTCATGAT+TGG + tig0025867:55636-55655 Msa1425570:CDS 35.0%
!!! ATTGGCTGGTATTTTTTTCC+TGG + tig0025867:55795-55814 Msa1425570:intron 35.0%
TCCTAAGTTAAACAGTGTTG+CGG + tig0025867:56233-56252 Msa1425570:CDS 35.0%
TCAATCCTAGTACCATATCA+TGG + tig0025867:56273-56292 Msa1425570:CDS 35.0%
CATGGATGGTATGTTTATGT+AGG + tig0025867:56291-56310 Msa1425570:intron 35.0%
AGAACACATCATCAAAACCA+TGG + tig0025867:56423-56442 Msa1425570:CDS 35.0%
ACAGTGAATATAAGCTTACC+GGG - tig0025867:56476-56495 None:intergenic 35.0%
CTATAACGCTATAGTGTAGT+GGG + tig0025867:56586-56605 Msa1425570:intron 35.0%
TAGCAGAAAATAGAGGTTAC+AGG - tig0025867:56686-56705 None:intergenic 35.0%
! AAGCTCTTGAAGATTTTCTC+TGG - tig0025867:56784-56803 None:intergenic 35.0%
AGAGAAAATCTTCAAGAGCT+TGG + tig0025867:56783-56802 Msa1425570:CDS 35.0%
TAGAAAGGATATGCAAGCAT+TGG - tig0025867:56847-56866 None:intergenic 35.0%
GGTGTATGAATTGATCTATG+AGG + tig0025867:56929-56948 Msa1425570:intron 35.0%
! ATGATGGTGTTTGAATTCAG+TGG + tig0025867:57116-57135 Msa1425570:intron 35.0%
GCACAAACAAGTCACTATTT+GGG - tig0025867:57177-57196 None:intergenic 35.0%
GGAATGGAATTTACCACATA+AGG - tig0025867:57316-57335 None:intergenic 35.0%
! GGTTAGAAAAAGTGATGGAA+TGG - tig0025867:57332-57351 None:intergenic 35.0%
! ACTTGAAGCTTTTTGTCATG+TGG + tig0025867:57418-57437 Msa1425570:intron 35.0%
! TTTTGTCATGTGGTTGGATT+TGG + tig0025867:57428-57447 Msa1425570:CDS 35.0%
! ACCATGGTAATTTGTCTTCA+TGG - tig0025867:57476-57495 None:intergenic 35.0%
AAACCAAGCCTTTACTCATT+TGG + tig0025867:57600-57619 Msa1425570:intron 35.0%
ATTCCAAATGAGTAAAGGCT+TGG - tig0025867:57606-57625 None:intergenic 35.0%
! TCATTTTGTATGGACAGGAA+TGG + tig0025867:57742-57761 Msa1425570:intron 35.0%
! CTTCAATTAAGTGGTAGTGT+GGG - tig0025867:57875-57894 None:intergenic 35.0%
TACTCACAGCTTCAATTAAG+TGG - tig0025867:57884-57903 None:intergenic 35.0%
CCACTAAATCAAGATTAGAC+GGG + tig0025867:58306-58325 Msa1425570:intron 35.0%
GGTAAAGGACTAGATTTCTT+TGG - tig0025867:58574-58593 None:intergenic 35.0%
!!! CTTCTCTCTTGTTTTACAAG+AGG - tig0025867:58738-58757 None:intergenic 35.0%
CAAATTGGACTGTTGTAACT+TGG + tig0025867:58892-58911 Msa1425570:three_prime_UTR 35.0%
!!! AAGAAGTTTTTTGTGGAGGG+TGG - tig0025867:55128-55147 None:intergenic 40.0%
TAGTTTCACTCACTCACCAA+TGG + tig0025867:55160-55179 Msa1425570:exon 40.0%
! GTTCTTGGTTTAGGGTACAA+TGG - tig0025867:55227-55246 None:intergenic 40.0%
GCAGAGGAAGAAGAAGAAAA+AGG + tig0025867:55374-55393 Msa1425570:CDS 40.0%
GAGGAAGAAGAAGAAAAAGG+TGG + tig0025867:55377-55396 Msa1425570:CDS 40.0%
GAAGAAGAAGAAAAAGGTGG+AGG + tig0025867:55380-55399 Msa1425570:CDS 40.0%
AGAAGAAGAAAAAGGTGGAG+GGG + tig0025867:55382-55401 Msa1425570:CDS 40.0%
TCACCTAATGTAAAAGGTGG+TGG - tig0025867:55443-55462 None:intergenic 40.0%
ATTGTTGGGTTAAGGATCCT+TGG + tig0025867:55486-55505 Msa1425570:CDS 40.0%
TGTTGTTAGGGATGTTGTTG+TGG + tig0025867:55523-55542 Msa1425570:CDS 40.0%
! AGGGATGTTGTTGTGGTTTT+TGG + tig0025867:55530-55549 Msa1425570:CDS 40.0%
! GGTTTGTTTGGCCACTTTAT+TGG + tig0025867:55585-55604 Msa1425570:CDS 40.0%
! TGCTCAAGGAACCATGTTTT+GGG + tig0025867:55610-55629 Msa1425570:CDS 40.0%
AACAAAGAGAGCCCAAAACA+TGG - tig0025867:55624-55643 None:intergenic 40.0%
! TTTTGGGCTCTCTTTGTTCT+TGG + tig0025867:55626-55645 Msa1425570:CDS 40.0%
AAAAGTCAAACTTTGCCACC+AGG - tig0025867:55816-55835 None:intergenic 40.0%
ACCAACTGAGTTAAGCTCAT+GGG - tig0025867:56069-56088 None:intergenic 40.0%
TACCAACTGAGTTAAGCTCA+TGG - tig0025867:56070-56089 None:intergenic 40.0%
ATGAGCTTAACTCAGTTGGT+AGG + tig0025867:56069-56088 Msa1425570:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+GGG + tig0025867:56070-56089 Msa1425570:intron 40.0%
TGCATATTATATGCAGGGGT+CGG + tig0025867:56097-56116 Msa1425570:intron 40.0%
CCTAAGTTAAACAGTGTTGC+GGG + tig0025867:56234-56253 Msa1425570:CDS 40.0%
CTAAGTTAAACAGTGTTGCG+GGG + tig0025867:56235-56254 Msa1425570:CDS 40.0%
TCCTAGTACCATATCATGGA+TGG + tig0025867:56277-56296 Msa1425570:CDS 40.0%
ACCATCCATGATATGGTACT+AGG - tig0025867:56281-56300 None:intergenic 40.0%
! GTGCGTTTTACTAATTGTGC+AGG + tig0025867:56388-56407 Msa1425570:intron 40.0%
! CATCATTTTCAACATGGCCA+TGG - tig0025867:56443-56462 None:intergenic 40.0%
AAATGATGAATCTTGGCACC+CGG + tig0025867:56455-56474 Msa1425570:CDS 40.0%
GCTATAACGCTATAGTGTAG+TGG + tig0025867:56585-56604 Msa1425570:intron 40.0%
!! GGATATGCAAGCATTGGAAA+AGG - tig0025867:56841-56860 None:intergenic 40.0%
GGCACAAACAAGTCACTATT+TGG - tig0025867:57178-57197 None:intergenic 40.0%
AACAGTATGTTGGACAGCTA+TGG + tig0025867:57225-57244 Msa1425570:CDS 40.0%
GCTTTATGGCATTCCTTATG+TGG + tig0025867:57300-57319 Msa1425570:CDS 40.0%
! GAAGCTTTTTGTCATGTGGT+TGG + tig0025867:57422-57441 Msa1425570:intron 40.0%
! GTAATTTGTCTTCATGGCCA+TGG - tig0025867:57470-57489 None:intergenic 40.0%
GCCATGAAGACAAATTACCA+TGG + tig0025867:57472-57491 Msa1425570:CDS 40.0%
GACAAATTACCATGGTATCG+TGG + tig0025867:57480-57499 Msa1425570:CDS 40.0%
CATGAGTTCCAATGTCATGA+TGG - tig0025867:57827-57846 None:intergenic 40.0%
! GCTTCAATTAAGTGGTAGTG+TGG - tig0025867:57876-57895 None:intergenic 40.0%
TGCTTATAATCAAGAGCGGA+CGG - tig0025867:57929-57948 None:intergenic 40.0%
CCCGTCTAATCTTGATTTAG+TGG - tig0025867:58309-58328 None:intergenic 40.0%
ACCGTCTGATCTTAATCCAA+CGG + tig0025867:58380-58399 Msa1425570:intron 40.0%
ACCGTTGGATTAAGATCAGA+CGG - tig0025867:58384-58403 None:intergenic 40.0%
TTCTTTCCTCTTGTAGACTG+AGG + tig0025867:58513-58532 Msa1425570:intron 40.0%
AAATCTCCAAGGAGGTGAAA+TGG - tig0025867:58595-58614 None:intergenic 40.0%
TAGAAGAGCCACTAAGGTTA+GGG - tig0025867:58684-58703 None:intergenic 40.0%
TTGATGTAGAAGAGCCACTA+AGG - tig0025867:58690-58709 None:intergenic 40.0%
TCCTCATAAGAAAAGGGAAG+AGG + tig0025867:58862-58881 Msa1425570:three_prime_UTR 40.0%
! ACCTCTTCCCTTTTCTTATG+AGG - tig0025867:58866-58885 None:intergenic 40.0%
!! GGAAGAGGTGCTTTACAAAT+TGG + tig0025867:58877-58896 Msa1425570:three_prime_UTR 40.0%
TGAAGGGAGTTATGTCTTCA+TGG + tig0025867:58998-59017 Msa1425570:three_prime_UTR 40.0%
CTTTGTCATGCACATTGTCA+AGG + tig0025867:59114-59133 Msa1425570:three_prime_UTR 40.0%
!!! AAGAAGTTTTTTGTGGAGGG+TGG - tig0025867:55128-55147 None:intergenic 40.0%
TAGTTTCACTCACTCACCAA+TGG + tig0025867:55160-55179 Msa1425570:exon 40.0%
! GTTCTTGGTTTAGGGTACAA+TGG - tig0025867:55227-55246 None:intergenic 40.0%
GCAGAGGAAGAAGAAGAAAA+AGG + tig0025867:55374-55393 Msa1425570:CDS 40.0%
GAGGAAGAAGAAGAAAAAGG+TGG + tig0025867:55377-55396 Msa1425570:CDS 40.0%
GAAGAAGAAGAAAAAGGTGG+AGG + tig0025867:55380-55399 Msa1425570:CDS 40.0%
AGAAGAAGAAAAAGGTGGAG+GGG + tig0025867:55382-55401 Msa1425570:CDS 40.0%
TCACCTAATGTAAAAGGTGG+TGG - tig0025867:55443-55462 None:intergenic 40.0%
ATTGTTGGGTTAAGGATCCT+TGG + tig0025867:55486-55505 Msa1425570:CDS 40.0%
TGTTGTTAGGGATGTTGTTG+TGG + tig0025867:55523-55542 Msa1425570:CDS 40.0%
! AGGGATGTTGTTGTGGTTTT+TGG + tig0025867:55530-55549 Msa1425570:CDS 40.0%
! GGTTTGTTTGGCCACTTTAT+TGG + tig0025867:55585-55604 Msa1425570:CDS 40.0%
! TGCTCAAGGAACCATGTTTT+GGG + tig0025867:55610-55629 Msa1425570:CDS 40.0%
AACAAAGAGAGCCCAAAACA+TGG - tig0025867:55624-55643 None:intergenic 40.0%
! TTTTGGGCTCTCTTTGTTCT+TGG + tig0025867:55626-55645 Msa1425570:CDS 40.0%
AAAAGTCAAACTTTGCCACC+AGG - tig0025867:55816-55835 None:intergenic 40.0%
ACCAACTGAGTTAAGCTCAT+GGG - tig0025867:56069-56088 None:intergenic 40.0%
TACCAACTGAGTTAAGCTCA+TGG - tig0025867:56070-56089 None:intergenic 40.0%
ATGAGCTTAACTCAGTTGGT+AGG + tig0025867:56069-56088 Msa1425570:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+GGG + tig0025867:56070-56089 Msa1425570:intron 40.0%
TGCATATTATATGCAGGGGT+CGG + tig0025867:56097-56116 Msa1425570:intron 40.0%
CCTAAGTTAAACAGTGTTGC+GGG + tig0025867:56234-56253 Msa1425570:CDS 40.0%
CTAAGTTAAACAGTGTTGCG+GGG + tig0025867:56235-56254 Msa1425570:CDS 40.0%
TCCTAGTACCATATCATGGA+TGG + tig0025867:56277-56296 Msa1425570:CDS 40.0%
ACCATCCATGATATGGTACT+AGG - tig0025867:56281-56300 None:intergenic 40.0%
! GTGCGTTTTACTAATTGTGC+AGG + tig0025867:56388-56407 Msa1425570:intron 40.0%
! CATCATTTTCAACATGGCCA+TGG - tig0025867:56443-56462 None:intergenic 40.0%
AAATGATGAATCTTGGCACC+CGG + tig0025867:56455-56474 Msa1425570:CDS 40.0%
GCTATAACGCTATAGTGTAG+TGG + tig0025867:56585-56604 Msa1425570:intron 40.0%
!! GGATATGCAAGCATTGGAAA+AGG - tig0025867:56841-56860 None:intergenic 40.0%
GGCACAAACAAGTCACTATT+TGG - tig0025867:57178-57197 None:intergenic 40.0%
AACAGTATGTTGGACAGCTA+TGG + tig0025867:57225-57244 Msa1425570:CDS 40.0%
GCTTTATGGCATTCCTTATG+TGG + tig0025867:57300-57319 Msa1425570:CDS 40.0%
! GAAGCTTTTTGTCATGTGGT+TGG + tig0025867:57422-57441 Msa1425570:intron 40.0%
! GTAATTTGTCTTCATGGCCA+TGG - tig0025867:57470-57489 None:intergenic 40.0%
GCCATGAAGACAAATTACCA+TGG + tig0025867:57472-57491 Msa1425570:CDS 40.0%
GACAAATTACCATGGTATCG+TGG + tig0025867:57480-57499 Msa1425570:CDS 40.0%
CATGAGTTCCAATGTCATGA+TGG - tig0025867:57827-57846 None:intergenic 40.0%
! GCTTCAATTAAGTGGTAGTG+TGG - tig0025867:57876-57895 None:intergenic 40.0%
TGCTTATAATCAAGAGCGGA+CGG - tig0025867:57929-57948 None:intergenic 40.0%
CCCGTCTAATCTTGATTTAG+TGG - tig0025867:58309-58328 None:intergenic 40.0%
ACCGTCTGATCTTAATCCAA+CGG + tig0025867:58380-58399 Msa1425570:intron 40.0%
ACCGTTGGATTAAGATCAGA+CGG - tig0025867:58384-58403 None:intergenic 40.0%
TTCTTTCCTCTTGTAGACTG+AGG + tig0025867:58513-58532 Msa1425570:intron 40.0%
AAATCTCCAAGGAGGTGAAA+TGG - tig0025867:58595-58614 None:intergenic 40.0%
TAGAAGAGCCACTAAGGTTA+GGG - tig0025867:58684-58703 None:intergenic 40.0%
TTGATGTAGAAGAGCCACTA+AGG - tig0025867:58690-58709 None:intergenic 40.0%
TCCTCATAAGAAAAGGGAAG+AGG + tig0025867:58862-58881 Msa1425570:three_prime_UTR 40.0%
! ACCTCTTCCCTTTTCTTATG+AGG - tig0025867:58866-58885 None:intergenic 40.0%
!! GGAAGAGGTGCTTTACAAAT+TGG + tig0025867:58877-58896 Msa1425570:three_prime_UTR 40.0%
TGAAGGGAGTTATGTCTTCA+TGG + tig0025867:58998-59017 Msa1425570:three_prime_UTR 40.0%
CTTTGTCATGCACATTGTCA+AGG + tig0025867:59114-59133 Msa1425570:three_prime_UTR 40.0%
!!! TTTTTTGTGGAGGGTGGTGT+TGG - tig0025867:55122-55141 None:intergenic 45.0%
! TTAGGGTACAATGGTGGAAG+TGG - tig0025867:55218-55237 None:intergenic 45.0%
! CTTGGTTTAGGGTACAATGG+TGG - tig0025867:55224-55243 None:intergenic 45.0%
TAAGAGTGAGTGCTCCTTCA+AGG + tig0025867:55348-55367 Msa1425570:CDS 45.0%
AAGAGTGAGTGCTCCTTCAA+GGG + tig0025867:55349-55368 Msa1425570:CDS 45.0%
! GCACCACCACCTTTTACATT+AGG + tig0025867:55437-55456 Msa1425570:CDS 45.0%
! CTGCTCAAGGAACCATGTTT+TGG + tig0025867:55609-55628 Msa1425570:CDS 45.0%
!!! GGCTGGTATTTTTTTCCTGG+TGG + tig0025867:55798-55817 Msa1425570:intron 45.0%
CCAACTGAGTTAAGCTCATG+GGG - tig0025867:56068-56087 None:intergenic 45.0%
GCATATTATATGCAGGGGTC+GGG + tig0025867:56098-56117 Msa1425570:intron 45.0%
CATATTATATGCAGGGGTCG+GGG + tig0025867:56099-56118 Msa1425570:intron 45.0%
! CCCGCAACACTGTTTAACTT+AGG - tig0025867:56237-56256 None:intergenic 45.0%
TCTCTGGCAACTGCAAGATT+TGG - tig0025867:56768-56787 None:intergenic 45.0%
!! AAGTGTCGGTGTTGAACACT+CGG + tig0025867:57029-57048 Msa1425570:intron 45.0%
TGTAGCACAGACACTTCAGA+TGG - tig0025867:57064-57083 None:intergenic 45.0%
GTGTTTGAATTCAGTGGAGC+AGG + tig0025867:57122-57141 Msa1425570:intron 45.0%
AGCTGTCCAACATACTGTTG+AGG - tig0025867:57224-57243 None:intergenic 45.0%
! GCTGCTTTGCTTGTAGGTTT+AGG + tig0025867:57247-57266 Msa1425570:CDS 45.0%
GTGACCTATTTGCATCACCA+TGG + tig0025867:57450-57469 Msa1425570:CDS 45.0%
! ATGGCCATGGTGATGCAAAT+AGG - tig0025867:57457-57476 None:intergenic 45.0%
ATTACCATGGTATCGTGGAC+AGG + tig0025867:57485-57504 Msa1425570:CDS 45.0%
ACAACTCTCGATCGTGACTA+TGG + tig0025867:57786-57805 Msa1425570:CDS 45.0%
! AAGTGGTAGTGTGGGATTTG+AGG - tig0025867:57867-57886 None:intergenic 45.0%
TAGAATCCAAACACTGCCTC+TGG - tig0025867:58260-58279 None:intergenic 45.0%
CAGTTACGCACATTTGACAC+AGG - tig0025867:58419-58438 None:intergenic 45.0%
CCAAGGAGGTGAAATGGTAA+AGG - tig0025867:58589-58608 None:intergenic 45.0%
CCTTTACCATTTCACCTCCT+TGG + tig0025867:58586-58605 Msa1425570:CDS 45.0%
! GACCATTTTGTCAGTGACAC+TGG + tig0025867:58634-58653 Msa1425570:CDS 45.0%
! CACCAGTGTCACTGACAAAA+TGG - tig0025867:58639-58658 None:intergenic 45.0%
CAAACAGACCCTAACCTTAG+TGG + tig0025867:58673-58692 Msa1425570:CDS 45.0%
GTAGAAGAGCCACTAAGGTT+AGG - tig0025867:58685-58704 None:intergenic 45.0%
CATGCACATTGTCAAGGTTG+TGG + tig0025867:59120-59139 Msa1425570:three_prime_UTR 45.0%
!!! TTTTTTGTGGAGGGTGGTGT+TGG - tig0025867:55122-55141 None:intergenic 45.0%
! TTAGGGTACAATGGTGGAAG+TGG - tig0025867:55218-55237 None:intergenic 45.0%
! CTTGGTTTAGGGTACAATGG+TGG - tig0025867:55224-55243 None:intergenic 45.0%
TAAGAGTGAGTGCTCCTTCA+AGG + tig0025867:55348-55367 Msa1425570:CDS 45.0%
AAGAGTGAGTGCTCCTTCAA+GGG + tig0025867:55349-55368 Msa1425570:CDS 45.0%
! GCACCACCACCTTTTACATT+AGG + tig0025867:55437-55456 Msa1425570:CDS 45.0%
! CTGCTCAAGGAACCATGTTT+TGG + tig0025867:55609-55628 Msa1425570:CDS 45.0%
!!! GGCTGGTATTTTTTTCCTGG+TGG + tig0025867:55798-55817 Msa1425570:intron 45.0%
CCAACTGAGTTAAGCTCATG+GGG - tig0025867:56068-56087 None:intergenic 45.0%
GCATATTATATGCAGGGGTC+GGG + tig0025867:56098-56117 Msa1425570:intron 45.0%
CATATTATATGCAGGGGTCG+GGG + tig0025867:56099-56118 Msa1425570:intron 45.0%
! CCCGCAACACTGTTTAACTT+AGG - tig0025867:56237-56256 None:intergenic 45.0%
TCTCTGGCAACTGCAAGATT+TGG - tig0025867:56768-56787 None:intergenic 45.0%
!! AAGTGTCGGTGTTGAACACT+CGG + tig0025867:57029-57048 Msa1425570:intron 45.0%
TGTAGCACAGACACTTCAGA+TGG - tig0025867:57064-57083 None:intergenic 45.0%
GTGTTTGAATTCAGTGGAGC+AGG + tig0025867:57122-57141 Msa1425570:intron 45.0%
AGCTGTCCAACATACTGTTG+AGG - tig0025867:57224-57243 None:intergenic 45.0%
! GCTGCTTTGCTTGTAGGTTT+AGG + tig0025867:57247-57266 Msa1425570:CDS 45.0%
GTGACCTATTTGCATCACCA+TGG + tig0025867:57450-57469 Msa1425570:CDS 45.0%
! ATGGCCATGGTGATGCAAAT+AGG - tig0025867:57457-57476 None:intergenic 45.0%
ATTACCATGGTATCGTGGAC+AGG + tig0025867:57485-57504 Msa1425570:CDS 45.0%
ACAACTCTCGATCGTGACTA+TGG + tig0025867:57786-57805 Msa1425570:CDS 45.0%
! AAGTGGTAGTGTGGGATTTG+AGG - tig0025867:57867-57886 None:intergenic 45.0%
TAGAATCCAAACACTGCCTC+TGG - tig0025867:58260-58279 None:intergenic 45.0%
CAGTTACGCACATTTGACAC+AGG - tig0025867:58419-58438 None:intergenic 45.0%
CCAAGGAGGTGAAATGGTAA+AGG - tig0025867:58589-58608 None:intergenic 45.0%
CCTTTACCATTTCACCTCCT+TGG + tig0025867:58586-58605 Msa1425570:CDS 45.0%
! GACCATTTTGTCAGTGACAC+TGG + tig0025867:58634-58653 Msa1425570:CDS 45.0%
! CACCAGTGTCACTGACAAAA+TGG - tig0025867:58639-58658 None:intergenic 45.0%
CAAACAGACCCTAACCTTAG+TGG + tig0025867:58673-58692 Msa1425570:CDS 45.0%
GTAGAAGAGCCACTAAGGTT+AGG - tig0025867:58685-58704 None:intergenic 45.0%
CATGCACATTGTCAAGGTTG+TGG + tig0025867:59120-59139 Msa1425570:three_prime_UTR 45.0%
TCTTCCTCTGCAACCCTTGA+AGG - tig0025867:55365-55384 None:intergenic 50.0%
AAAAGGTGGAGGGGTAGTTC+AGG + tig0025867:55391-55410 Msa1425570:CDS 50.0%
GGTGCACCAGGGTCAAAATT+TGG - tig0025867:55422-55441 None:intergenic 50.0%
! TAAAAGGTGGTGGTGCACCA+GGG - tig0025867:55433-55452 None:intergenic 50.0%
CCTTGAGCAGCCCAATAAAG+TGG - tig0025867:55599-55618 None:intergenic 50.0%
CCACTTTATTGGGCTGCTCA+AGG + tig0025867:55596-55615 Msa1425570:CDS 50.0%
CCCCATGAGCTTAACTCAGT+TGG + tig0025867:56065-56084 Msa1425570:intron 50.0%
ACTATAGCACTAGCGTGCAG+CGG + tig0025867:56648-56667 Msa1425570:intron 50.0%
AAGTGAGAACCACTCTTCCC+AGG - tig0025867:57151-57170 None:intergenic 50.0%
! GCTATGGCTGCTTTGCTTGT+AGG + tig0025867:57241-57260 Msa1425570:CDS 50.0%
GATACCTGTCCACGATACCA+TGG - tig0025867:57492-57511 None:intergenic 50.0%
CAGGAATGGAGCTACCTTAG+AGG + tig0025867:57756-57775 Msa1425570:intron 50.0%
GAATGGAGCTACCTTAGAGG+CGG + tig0025867:57759-57778 Msa1425570:CDS 50.0%
GAGTTGTAAGTCCGCCTCTA+AGG - tig0025867:57773-57792 None:intergenic 50.0%
TCAAGACCAGAGGCAGTGTT+TGG + tig0025867:58251-58270 Msa1425570:intron 50.0%
AGGCACGCTATCTTAACCGT+TGG - tig0025867:58399-58418 None:intergenic 50.0%
TAGCTGCCTCAGTCTACAAG+AGG - tig0025867:58522-58541 None:intergenic 50.0%
GAGGCAGCTAAACCAGTTCT+TGG + tig0025867:58532-58551 Msa1425570:CDS 50.0%
TCTTCCTCTGCAACCCTTGA+AGG - tig0025867:55365-55384 None:intergenic 50.0%
AAAAGGTGGAGGGGTAGTTC+AGG + tig0025867:55391-55410 Msa1425570:CDS 50.0%
GGTGCACCAGGGTCAAAATT+TGG - tig0025867:55422-55441 None:intergenic 50.0%
! TAAAAGGTGGTGGTGCACCA+GGG - tig0025867:55433-55452 None:intergenic 50.0%
CCTTGAGCAGCCCAATAAAG+TGG - tig0025867:55599-55618 None:intergenic 50.0%
CCACTTTATTGGGCTGCTCA+AGG + tig0025867:55596-55615 Msa1425570:CDS 50.0%
CCCCATGAGCTTAACTCAGT+TGG + tig0025867:56065-56084 Msa1425570:intron 50.0%
ACTATAGCACTAGCGTGCAG+CGG + tig0025867:56648-56667 Msa1425570:intron 50.0%
AAGTGAGAACCACTCTTCCC+AGG - tig0025867:57151-57170 None:intergenic 50.0%
! GCTATGGCTGCTTTGCTTGT+AGG + tig0025867:57241-57260 Msa1425570:CDS 50.0%
GATACCTGTCCACGATACCA+TGG - tig0025867:57492-57511 None:intergenic 50.0%
CAGGAATGGAGCTACCTTAG+AGG + tig0025867:57756-57775 Msa1425570:intron 50.0%
GAATGGAGCTACCTTAGAGG+CGG + tig0025867:57759-57778 Msa1425570:CDS 50.0%
GAGTTGTAAGTCCGCCTCTA+AGG - tig0025867:57773-57792 None:intergenic 50.0%
TCAAGACCAGAGGCAGTGTT+TGG + tig0025867:58251-58270 Msa1425570:intron 50.0%
AGGCACGCTATCTTAACCGT+TGG - tig0025867:58399-58418 None:intergenic 50.0%
TAGCTGCCTCAGTCTACAAG+AGG - tig0025867:58522-58541 None:intergenic 50.0%
GAGGCAGCTAAACCAGTTCT+TGG + tig0025867:58532-58551 Msa1425570:CDS 50.0%
! GTGGAGGGTGGTGTTGGATT+TGG - tig0025867:55116-55135 None:intergenic 55.0%
TGCTCCTTCAAGGGTTGCAG+AGG + tig0025867:55358-55377 Msa1425570:CDS 55.0%
! GTAAAAGGTGGTGGTGCACC+AGG - tig0025867:55434-55453 None:intergenic 55.0%
ATTCAGTGGAGCAGGAGTCC+TGG + tig0025867:57130-57149 Msa1425570:intron 55.0%
TTCAGTGGAGCAGGAGTCCT+GGG + tig0025867:57131-57150 Msa1425570:intron 55.0%
! GTGGAGGGTGGTGTTGGATT+TGG - tig0025867:55116-55135 None:intergenic 55.0%
TGCTCCTTCAAGGGTTGCAG+AGG + tig0025867:55358-55377 Msa1425570:CDS 55.0%
! GTAAAAGGTGGTGGTGCACC+AGG - tig0025867:55434-55453 None:intergenic 55.0%
ATTCAGTGGAGCAGGAGTCC+TGG + tig0025867:57130-57149 Msa1425570:intron 55.0%
TTCAGTGGAGCAGGAGTCCT+GGG + tig0025867:57131-57150 Msa1425570:intron 55.0%
AGCAGGAGTCCTGGGAAGAG+TGG + tig0025867:57139-57158 Msa1425570:CDS 60.0%
AGCAGGAGTCCTGGGAAGAG+TGG + tig0025867:57139-57158 Msa1425570:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0025867 gene 55076 59171 55076 ID=Msa1425570;Name=Msa1425570
tig0025867 mRNA 55076 59171 55076 ID=Msa1425570-mRNA-1;Parent=Msa1425570;Name=Msa1425570-mRNA-1;_AED=0.05;_eAED=0.05;_QI=103|1|1|1|1|1|8|457|439
tig0025867 exon 55076 55657 55076 ID=Msa1425570-mRNA-1:exon:4344;Parent=Msa1425570-mRNA-1
tig0025867 exon 56209 56298 56209 ID=Msa1425570-mRNA-1:exon:4345;Parent=Msa1425570-mRNA-1
tig0025867 exon 56410 56476 56410 ID=Msa1425570-mRNA-1:exon:4346;Parent=Msa1425570-mRNA-1
tig0025867 exon 56778 56870 56778 ID=Msa1425570-mRNA-1:exon:4347;Parent=Msa1425570-mRNA-1
tig0025867 exon 57136 57321 57136 ID=Msa1425570-mRNA-1:exon:4348;Parent=Msa1425570-mRNA-1
tig0025867 exon 57426 57506 57426 ID=Msa1425570-mRNA-1:exon:4349;Parent=Msa1425570-mRNA-1
tig0025867 exon 57759 57896 57759 ID=Msa1425570-mRNA-1:exon:4350;Parent=Msa1425570-mRNA-1
tig0025867 exon 58529 59171 58529 ID=Msa1425570-mRNA-1:exon:4351;Parent=Msa1425570-mRNA-1
tig0025867 five_prime_UTR 55076 55178 55076 ID=Msa1425570-mRNA-1:five_prime_utr;Parent=Msa1425570-mRNA-1
tig0025867 CDS 55179 55657 55179 ID=Msa1425570-mRNA-1:cds;Parent=Msa1425570-mRNA-1
tig0025867 CDS 56209 56298 56209 ID=Msa1425570-mRNA-1:cds;Parent=Msa1425570-mRNA-1
tig0025867 CDS 56410 56476 56410 ID=Msa1425570-mRNA-1:cds;Parent=Msa1425570-mRNA-1
tig0025867 CDS 56778 56870 56778 ID=Msa1425570-mRNA-1:cds;Parent=Msa1425570-mRNA-1
tig0025867 CDS 57136 57321 57136 ID=Msa1425570-mRNA-1:cds;Parent=Msa1425570-mRNA-1
tig0025867 CDS 57426 57506 57426 ID=Msa1425570-mRNA-1:cds;Parent=Msa1425570-mRNA-1
tig0025867 CDS 57759 57896 57759 ID=Msa1425570-mRNA-1:cds;Parent=Msa1425570-mRNA-1
tig0025867 CDS 58529 58714 58529 ID=Msa1425570-mRNA-1:cds;Parent=Msa1425570-mRNA-1
tig0025867 three_prime_UTR 58715 59171 58715 ID=Msa1425570-mRNA-1:three_prime_utr;Parent=Msa1425570-mRNA-1
Gene Sequence

>Msa1425570

ATGGCAACAATGTTTTTATCAGAATGTGGCTTAAGACCACTTCCACCATTGTACCCTAAACCAAGAACAAACACAATTTCATTACAAAAACCTTCAAAGATTAGATTTTTAAGCAAAACAACCAAAAGGGTATCTTCAGATCTAAGGTTTAAACCAAAAACATGGGAATTAAGAGTGAGTGCTCCTTCAAGGGTTGCAGAGGAAGAAGAAGAAAAAGGTGGAGGGGTAGTTCAGGAATTTCCAAATTTTGACCCTGGTGCACCACCACCTTTTACATTAGGTGATATAAGAGCAGCTATACCTAAACATTGTTGGGTTAAGGATCCTTGGAAATCTATGAGCTATGTTGTTAGGGATGTTGTTGTGGTTTTTGGTTTGGCTGTTGTTGCTGCTTATGTTAATAGTTGGTTTGTTTGGCCACTTTATTGGGCTGCTCAAGGAACCATGTTTTGGGCTCTCTTTGTTCTTGGTCATGATTGTGGTCATGGAAGCTTTTCAAACAATCCTAAGTTAAACAGTGTTGCGGGGCATTTGCTGCATTCATCAATCCTAGTACCATATCATGGATGGAGAATTAGTCATAGAACACATCATCAAAACCATGGCCATGTTGAAAATGATGAATCTTGGCACCCGTTGCCAGAGAAAATCTTCAAGAGCTTGGACAATGCAACAAAAATGTTAAGATTTACAATACCTTTTCCAATGCTTGCATATCCTTTCTACCTTTGGAGCAGGAGTCCTGGGAAGAGTGGTTCTCACTTTGACCCAAATAGTGACTTGTTTGTGCCAAATGAGAGAAAAGATGTTATTACCTCAACAGTATGTTGGACAGCTATGGCTGCTTTGCTTGTAGGTTTAGGATTTGTAATGGGTCCAATTCAATTACTCAAGCTTTATGGCATTCCTTATGTGCTTTTTGTCATGTGGTTGGATTTGGTGACCTATTTGCATCACCATGGCCATGAAGACAAATTACCATGGTATCGTGGACAGGAATGGAGCTACCTTAGAGGCGGACTTACAACTCTCGATCGTGACTATGGATTGATAAATAACATCCATCATGACATTGGAACTCATGTCATTCATCACTTATTTCCTCAAATCCCACACTACCACTTAATTGAAGCTACTGAGGCAGCTAAACCAGTTCTTGGAAGATATTACAAAGAGCCAAAGAAATCTAGTCCTTTACCATTTCACCTCCTTGGAGATTTAATAAAAAGCATGAAAAAAGACCATTTTGTCAGTGACACTGGTGATATTGTTTACTATCAAACAGACCCTAACCTTAGTGGCTCTTCTACATCAAAATAA

Protein sequence

>Msa1425570

MATMFLSECGLRPLPPLYPKPRTNTISLQKPSKIRFLSKTTKRVSSDLRFKPKTWELRVSAPSRVAEEEEEKGGGVVQEFPNFDPGAPPPFTLGDIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAVVAAYVNSWFVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFKSLDNATKMLRFTIPFPMLAYPFYLWSRSPGKSGSHFDPNSDLFVPNERKDVITSTVCWTAMAALLVGLGFVMGPIQLLKLYGIPYVLFVMWLDLVTYLHHHGHEDKLPWYRGQEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGRYYKEPKKSSPLPFHLLGDLIKSMKKDHFVSDTGDIVYYQTDPNLSGSSTSK*