AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1420630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1420630 MtrunA17_Chr4g0006241 97.955 440 8 1 1 439 1 440 0.0 889
Msa1420630 MtrunA17_Chr7g0242601 74.273 447 106 2 1 439 1 446 0.0 690
Msa1420630 MtrunA17_Chr5g0430241 68.617 376 110 1 65 432 10 385 0.0 555
Msa1420630 MtrunA17_Chr3g0105171 71.508 358 102 0 82 439 26 383 0.0 540
Msa1420630 MtrunA17_Chr1g0175301 38.509 322 180 5 85 390 26 345 2.26e-68 222
Msa1420630 MtrunA17_Chr7g0258651 36.932 352 193 8 58 391 6 346 3.19e-65 214
Msa1420630 MtrunA17_Chr1g0210511 37.826 230 132 4 171 391 14 241 1.24e-40 146
Msa1420630 MtrunA17_Chr4g0074071 29.118 340 215 12 62 392 75 397 3.50e-33 130
Msa1420630 MtrunA17_Chr2g0305881 32.624 141 91 3 60 198 70 208 8.83e-16 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1420630 AT5G05580.1 74.208 442 102 4 1 437 1 435 0.0 680
Msa1420630 AT3G11170.1 71.493 442 117 2 1 435 1 440 0.0 650
Msa1420630 AT5G05580.2 73.506 385 90 4 1 380 1 378 0.0 586
Msa1420630 AT2G29980.1 68.766 381 119 0 59 439 2 382 0.0 556
Msa1420630 AT2G29980.2 67.153 274 90 0 59 332 2 275 2.19e-134 388
Msa1420630 AT3G12120.1 37.654 324 182 8 85 391 25 345 5.63e-67 219
Msa1420630 AT3G12120.2 37.654 324 182 8 85 391 25 345 5.63e-67 219
Msa1420630 AT4G30950.1 29.586 338 215 12 59 389 74 395 1.44e-31 125

Find 118 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCAATTACTCAAGCTTTA+TGG 0.136027 tig0024833:+43295 Msa1420630:CDS
GGCACAAACAAGTCACTATT+TGG 0.140954 tig0024833:-43184 None:intergenic
CTGCTCAAGGAACCATGTTT+TGG 0.171359 tig0024833:+41618 Msa1420630:CDS
GGTTTGTTTGGCCACTTTAT+TGG 0.187935 tig0024833:+41594 Msa1420630:CDS
ATTTCACTCTTAATATTTAT+AGG 0.191977 tig0024833:-44846 None:intergenic
GCTATGGCTGCTTTGCTTGT+AGG 0.251364 tig0024833:+43250 Msa1420630:CDS
TTGTGTTTGTTCTTGGTTTA+GGG 0.253549 tig0024833:-41241 None:intergenic
CTTATATCACCTAATGTAAA+AGG 0.263942 tig0024833:-41455 None:intergenic
GGTGCACCAGGGTCAAAATT+TGG 0.265489 tig0024833:-41428 None:intergenic
AATGAAATTGTGTTTGTTCT+TGG 0.270224 tig0024833:-41248 None:intergenic
GTGGAGGGTGGTGTTGGATT+TGG 0.274206 tig0024833:-41122 None:intergenic
ATTGTGTTTGTTCTTGGTTT+AGG 0.275137 tig0024833:-41242 None:intergenic
GCTGCTTTGCTTGTAGGTTT+AGG 0.278162 tig0024833:+43256 Msa1420630:CDS
AATCTATGAGCTATGTTGTT+AGG 0.285313 tig0024833:+41519 Msa1420630:CDS
GGTAAAGGACTAGATTTCTT+TGG 0.287183 tig0024833:-44580 None:intergenic
GGAAGAGGTGCTTTACAAAT+TGG 0.287961 tig0024833:+44886 Msa1420630:three_prime_UTR
TCTTCCTCTGCAACCCTTGA+AGG 0.290001 tig0024833:-41371 None:intergenic
GTTTGTTTGGCCACTTTATT+GGG 0.291498 tig0024833:+41595 Msa1420630:CDS
TCTAAAGTTGTTGTTGGATT+TGG 0.310519 tig0024833:-41098 None:intergenic
AAAGGGTATCTTCAGATCTA+AGG 0.313778 tig0024833:+41312 Msa1420630:CDS
AAAAGGTGGAGGGGTAGTTC+AGG 0.318396 tig0024833:+41400 Msa1420630:CDS
ATGTTAATAGTTGGTTTGTT+TGG 0.321832 tig0024833:+41582 Msa1420630:CDS
ACCATGGTAATTTGTCTTCA+TGG 0.346135 tig0024833:-43482 None:intergenic
TCTTTGTTCTTGGTCATGAT+TGG 0.352865 tig0024833:+41645 Msa1420630:CDS
CACCAGTGTCACTGACAAAA+TGG 0.361992 tig0024833:-44645 None:intergenic
ACCTAAACATTGTTGGGTTA+AGG 0.363933 tig0024833:+41487 Msa1420630:CDS
GCAGAGGAAGAAGAAGAAAA+AGG 0.365509 tig0024833:+41383 Msa1420630:CDS
TAGATCTGAAGATACCCTTT+TGG 0.370698 tig0024833:-41309 None:intergenic
GAGGCAGCTAAACCAGTTCT+TGG 0.371883 tig0024833:+44541 Msa1420630:CDS
TTGTAATATCTTCCAAGAAC+TGG 0.377558 tig0024833:-44553 None:intergenic
TAAACATACCATCCATGATA+TGG 0.377797 tig0024833:-42294 None:intergenic
ACAACTCTCGATCGTGACTA+TGG 0.378968 tig0024833:+43795 Msa1420630:CDS
ATTGAGTGATTATTATTGAA+TGG 0.380102 tig0024833:+45063 Msa1420630:three_prime_UTR
CCTAAGTTAAACAGTGTTGC+GGG 0.381423 tig0024833:+42243 Msa1420630:CDS
CAGCTATACCTAAACATTGT+TGG 0.384073 tig0024833:+41480 Msa1420630:CDS
TAAAGCTTGAGTAATTGAAT+TGG 0.388459 tig0024833:-43292 None:intergenic
GTAGAAGAGCCACTAAGGTT+AGG 0.394730 tig0024833:-44691 None:intergenic
CAGGAATGGAGCTACCTTAG+AGG 0.397812 tig0024833:+43765 Msa1420630:intron
GAGTTGTAAGTCCGCCTCTA+AGG 0.398628 tig0024833:-43779 None:intergenic
ATTGTTGGGTTAAGGATCCT+TGG 0.399359 tig0024833:+41495 Msa1420630:CDS
AAGTGGTAGTGTGGGATTTG+AGG 0.405657 tig0024833:-43873 None:intergenic
CCTTTACCATTTCACCTCCT+TGG 0.406643 tig0024833:+44595 Msa1420630:CDS
TCCTTAACCCAACAATGTTT+AGG 0.408115 tig0024833:-41488 None:intergenic
TGAAGGGAGTTATGTCTTCA+TGG 0.410198 tig0024833:+45007 Msa1420630:three_prime_UTR
TTTGGTTCTAAAGTTGTTGT+TGG 0.413285 tig0024833:-41104 None:intergenic
TTGCTGCTTATGTTAATAGT+TGG 0.419399 tig0024833:+41573 Msa1420630:CDS
GTAGGTTTAGGATTTGTAAT+GGG 0.420064 tig0024833:+43268 Msa1420630:CDS
AGCTATACCTAAACATTGTT+GGG 0.420218 tig0024833:+41481 Msa1420630:CDS
GGAATGGAATTTACCACATA+AGG 0.420459 tig0024833:-43322 None:intergenic
TGTAGGTTTAGGATTTGTAA+TGG 0.421486 tig0024833:+43267 Msa1420630:CDS
TAAGAGTGAGTGCTCCTTCA+AGG 0.422040 tig0024833:+41357 Msa1420630:CDS
AAATCTCCAAGGAGGTGAAA+TGG 0.440919 tig0024833:-44601 None:intergenic
GCTTTATGGCATTCCTTATG+TGG 0.442119 tig0024833:+43309 Msa1420630:CDS
GTAAAAGGTGGTGGTGCACC+AGG 0.442471 tig0024833:-41440 None:intergenic
CAAACAGACCCTAACCTTAG+TGG 0.442623 tig0024833:+44682 Msa1420630:CDS
ATGGCCATGGTGATGCAAAT+AGG 0.454958 tig0024833:-43463 None:intergenic
GCACAAACAAGTCACTATTT+GGG 0.459556 tig0024833:-43183 None:intergenic
ATCTATGAGCTATGTTGTTA+GGG 0.462681 tig0024833:+41520 Msa1420630:CDS
GTGTTTGAATTCAGTGGAGC+AGG 0.468799 tig0024833:+43131 Msa1420630:intron
CATGCACATTGTCAAGGTTG+TGG 0.469530 tig0024833:+45129 Msa1420630:three_prime_UTR
AAATTGTTTATTCTTGATGA+AGG 0.474936 tig0024833:+44990 Msa1420630:three_prime_UTR
AGAGAAAATCTTCAAGAGCT+TGG 0.481339 tig0024833:+42792 Msa1420630:CDS
CAAATTGGACTGTTGTAACT+TGG 0.483581 tig0024833:+44901 Msa1420630:three_prime_UTR
CCCGCAACACTGTTTAACTT+AGG 0.489628 tig0024833:-42243 None:intergenic
TACTCACAGCTTCAATTAAG+TGG 0.489994 tig0024833:-43890 None:intergenic
TAGAAGAGCCACTAAGGTTA+GGG 0.494714 tig0024833:-44690 None:intergenic
TTCAGTGGAGCAGGAGTCCT+GGG 0.495423 tig0024833:+43140 Msa1420630:intron
ATTCAGTGGAGCAGGAGTCC+TGG 0.502823 tig0024833:+43139 Msa1420630:intron
TTTAAGCAAAACAACCAAAA+GGG 0.507525 tig0024833:+41295 Msa1420630:CDS
TGTTGTTAGGGATGTTGTTG+TGG 0.508034 tig0024833:+41532 Msa1420630:CDS
TCCTCATAAGAAAAGGGAAG+AGG 0.511687 tig0024833:+44871 Msa1420630:three_prime_UTR
TAGAAAGGATATGCAAGCAT+TGG 0.513379 tig0024833:-42853 None:intergenic
TTGATGTAGAAGAGCCACTA+AGG 0.513464 tig0024833:-44696 None:intergenic
AAGTGAGAACCACTCTTCCC+AGG 0.513601 tig0024833:-43157 None:intergenic
CTTTGTCATGCACATTGTCA+AGG 0.515814 tig0024833:+45123 Msa1420630:three_prime_UTR
CCACTTTATTGGGCTGCTCA+AGG 0.516126 tig0024833:+41605 Msa1420630:CDS
GGATATGCAAGCATTGGAAA+AGG 0.516624 tig0024833:-42847 None:intergenic
TTATTACCTCAACAGTATGT+TGG 0.518216 tig0024833:+43224 Msa1420630:CDS
GAGTGAAACTAAAGTATGAA+AGG 0.518890 tig0024833:-41157 None:intergenic
GTTCTTGGTTTAGGGTACAA+TGG 0.520187 tig0024833:-41233 None:intergenic
TTACAACTTACAAGGTAGAA+AGG 0.522153 tig0024833:-42868 None:intergenic
TTAGGGTACAATGGTGGAAG+TGG 0.522625 tig0024833:-41224 None:intergenic
ACCATCCATGATATGGTACT+AGG 0.523521 tig0024833:-42287 None:intergenic
TCAATCCTAGTACCATATCA+TGG 0.529822 tig0024833:+42282 Msa1420630:CDS
AACAGTATGTTGGACAGCTA+TGG 0.530932 tig0024833:+43234 Msa1420630:CDS
TACTCATTGATTGAAGCAAA+AGG 0.534663 tig0024833:+44927 Msa1420630:three_prime_UTR
AATTGTTTATTCTTGATGAA+GGG 0.541167 tig0024833:+44991 Msa1420630:three_prime_UTR
AATAACATCCATCATGACAT+TGG 0.543696 tig0024833:+43825 Msa1420630:CDS
TGCTCCTTCAAGGGTTGCAG+AGG 0.544094 tig0024833:+41367 Msa1420630:CDS
ATTACCATGGTATCGTGGAC+AGG 0.548527 tig0024833:+43494 Msa1420630:CDS
CCAAGGAGGTGAAATGGTAA+AGG 0.549624 tig0024833:-44595 None:intergenic
ATGTTGAAAATGATGAATCT+TGG 0.550797 tig0024833:+42457 Msa1420630:CDS
AAGAGTGAGTGCTCCTTCAA+GGG 0.557691 tig0024833:+41358 Msa1420630:CDS
TCACCTAATGTAAAAGGTGG+TGG 0.560118 tig0024833:-41449 None:intergenic
CTTCAATTAAGTGGTAGTGT+GGG 0.565641 tig0024833:-43881 None:intergenic
TCCTAGTACCATATCATGGA+TGG 0.566773 tig0024833:+42286 Msa1420630:CDS
TCCTAAGTTAAACAGTGTTG+CGG 0.570080 tig0024833:+42242 Msa1420630:CDS
GCTTCAATTAAGTGGTAGTG+TGG 0.575416 tig0024833:-43882 None:intergenic
TAGTTTCACTCACTCACCAA+TGG 0.576236 tig0024833:+41169 Msa1420630:exon
CCTTGAGCAGCCCAATAAAG+TGG 0.583743 tig0024833:-41605 None:intergenic
CATGAGTTCCAATGTCATGA+TGG 0.588288 tig0024833:-43833 None:intergenic
AGCAGGAGTCCTGGGAAGAG+TGG 0.590625 tig0024833:+43148 Msa1420630:CDS
GTGACCTATTTGCATCACCA+TGG 0.611816 tig0024833:+43459 Msa1420630:CDS
ATATCACCTAATGTAAAAGG+TGG 0.614456 tig0024833:-41452 None:intergenic
CATATGACATATGAATTATG+TGG 0.619695 tig0024833:-44767 None:intergenic
AACAAAGAGAGCCCAAAACA+TGG 0.628713 tig0024833:-41630 None:intergenic
GACAAATTACCATGGTATCG+TGG 0.635203 tig0024833:+43489 Msa1420630:CDS
ACATAGCTCATAGATTTCCA+AGG 0.638388 tig0024833:-41512 None:intergenic
GTAATTTGTCTTCATGGCCA+TGG 0.639785 tig0024833:-43476 None:intergenic
GATACCTGTCCACGATACCA+TGG 0.640882 tig0024833:-43498 None:intergenic
AAATGATGAATCTTGGCACC+CGG 0.642419 tig0024833:+42464 Msa1420630:CDS
CTTGGTTTAGGGTACAATGG+TGG 0.643600 tig0024833:-41230 None:intergenic
AGCTGTCCAACATACTGTTG+AGG 0.647019 tig0024833:-43230 None:intergenic
GAATGGAGCTACCTTAGAGG+CGG 0.680144 tig0024833:+43768 Msa1420630:CDS
AGAACACATCATCAAAACCA+TGG 0.681922 tig0024833:+42432 Msa1420630:CDS
TAAAAGGTGGTGGTGCACCA+GGG 0.683201 tig0024833:-41439 None:intergenic
CTAAGTTAAACAGTGTTGCG+GGG 0.690117 tig0024833:+42244 Msa1420630:CDS
GCCATGAAGACAAATTACCA+TGG 0.707625 tig0024833:+43481 Msa1420630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTATCATAATATAAAC+TGG - tig0024833:42168-42187 None:intergenic 10.0%
!! CTAAAAATAGATTAAAATAA+AGG - tig0024833:43575-43594 None:intergenic 10.0%
!! TAAATTAATAGTATTAATCA+CGG - tig0024833:43998-44017 None:intergenic 10.0%
!! TTAATTATCATAATATAAAC+TGG - tig0024833:42168-42187 None:intergenic 10.0%
!! CTAAAAATAGATTAAAATAA+AGG - tig0024833:43575-43594 None:intergenic 10.0%
!! TAAATTAATAGTATTAATCA+CGG - tig0024833:43998-44017 None:intergenic 10.0%
!!! AAATATGGTATTTTTATTCT+TGG + tig0024833:41866-41885 Msa1420630:intron 15.0%
!! TGAACAAAAATTAACATTAA+AGG - tig0024833:41948-41967 None:intergenic 15.0%
!! AAAAAAGAGTTAAAAAAAAG+TGG - tig0024833:43373-43392 None:intergenic 15.0%
!! AAATTAATAGTATTAATCAC+GGG - tig0024833:43997-44016 None:intergenic 15.0%
!! TTAATACTATTAATTTACCT+TGG + tig0024833:44001-44020 Msa1420630:intron 15.0%
!! TAATACTATTAATTTACCTT+GGG + tig0024833:44002-44021 Msa1420630:intron 15.0%
!!! TAGTATATTTATGGTATTTT+AGG + tig0024833:44153-44172 Msa1420630:intron 15.0%
!! ATTTCACTCTTAATATTTAT+AGG - tig0024833:44849-44868 None:intergenic 15.0%
!!! AAATATGGTATTTTTATTCT+TGG + tig0024833:41866-41885 Msa1420630:intron 15.0%
!! TGAACAAAAATTAACATTAA+AGG - tig0024833:41948-41967 None:intergenic 15.0%
!! AAAAAAGAGTTAAAAAAAAG+TGG - tig0024833:43373-43392 None:intergenic 15.0%
!! AAATTAATAGTATTAATCAC+GGG - tig0024833:43997-44016 None:intergenic 15.0%
!! TTAATACTATTAATTTACCT+TGG + tig0024833:44001-44020 Msa1420630:intron 15.0%
!! TAATACTATTAATTTACCTT+GGG + tig0024833:44002-44021 Msa1420630:intron 15.0%
!!! TAGTATATTTATGGTATTTT+AGG + tig0024833:44153-44172 Msa1420630:intron 15.0%
!! ATTTCACTCTTAATATTTAT+AGG - tig0024833:44849-44868 None:intergenic 15.0%
!! CTTAAAAATCTAATCTTTGA+AGG - tig0024833:41281-41300 None:intergenic 20.0%
!! GAACTGAAAATCAATATTAA+AGG - tig0024833:41712-41731 None:intergenic 20.0%
!! TAAAGAAAAAACAACCAAAT+TGG - tig0024833:41752-41771 None:intergenic 20.0%
!!! GATTTTTGCTCAATTATTAT+TGG + tig0024833:41786-41805 Msa1420630:intron 20.0%
!! GCTATGATAATTGATAAATA+TGG + tig0024833:41851-41870 Msa1420630:intron 20.0%
!! TAGGTTGTTATAAATACTAA+TGG + tig0024833:41895-41914 Msa1420630:intron 20.0%
!!! TGTTGATTTTTTTTTCTTAG+TGG + tig0024833:41977-41996 Msa1420630:intron 20.0%
!!! TTTTGATGATTTTTTTTTCC+CGG + tig0024833:42020-42039 Msa1420630:intron 20.0%
!! TGATAATTAATAATCATGTC+TGG + tig0024833:42178-42197 Msa1420630:intron 20.0%
!! AAGTTTCTTATATGAAATCA+TGG - tig0024833:42535-42554 None:intergenic 20.0%
!!! TTTTTAAATAACTGCTAAAG+CGG + tig0024833:42570-42589 Msa1420630:intron 20.0%
!!! CTATTTCACAACATTTTTAA+TGG - tig0024833:42635-42654 None:intergenic 20.0%
!!! AGATTTGGAATTAAATGTAA+TGG - tig0024833:42762-42781 None:intergenic 20.0%
!! TTGTTAATCTTATCTTATGA+TGG + tig0024833:43109-43128 Msa1420630:intron 20.0%
!! AGAATTTATAAGGAAAAGAA+TGG - tig0024833:43529-43548 None:intergenic 20.0%
!! ATTTGATGAGAGAATTTATA+AGG - tig0024833:43539-43558 None:intergenic 20.0%
!! AATTTATTCCAAATGAGTAA+AGG - tig0024833:43620-43639 None:intergenic 20.0%
!!! AAGTTTATTTCTTGTTTATG+TGG + tig0024833:43685-43704 Msa1420630:intron 20.0%
!! AGCTTAAAGTAGTATATTTA+TGG + tig0024833:44144-44163 Msa1420630:intron 20.0%
!!! AATTTGATGATATTTAAGAC+TGG + tig0024833:44208-44227 Msa1420630:intron 20.0%
!! TTGATGAATGAATAATTGAA+TGG + tig0024833:44479-44498 Msa1420630:intron 20.0%
!!! AAATTTTCCTCATAAGAAAA+GGG + tig0024833:44865-44884 Msa1420630:three_prime_UTR 20.0%
!! AAATTGTTTATTCTTGATGA+AGG + tig0024833:44990-45009 Msa1420630:three_prime_UTR 20.0%
!! AATTGTTTATTCTTGATGAA+GGG + tig0024833:44991-45010 Msa1420630:three_prime_UTR 20.0%
!!! AATAATCACTCAATTTTTTG+AGG - tig0024833:45057-45076 None:intergenic 20.0%
!! ATTGAGTGATTATTATTGAA+TGG + tig0024833:45063-45082 Msa1420630:three_prime_UTR 20.0%
!! CTTAAAAATCTAATCTTTGA+AGG - tig0024833:41281-41300 None:intergenic 20.0%
!! GAACTGAAAATCAATATTAA+AGG - tig0024833:41712-41731 None:intergenic 20.0%
!! TAAAGAAAAAACAACCAAAT+TGG - tig0024833:41752-41771 None:intergenic 20.0%
!!! GATTTTTGCTCAATTATTAT+TGG + tig0024833:41786-41805 Msa1420630:intron 20.0%
!! GCTATGATAATTGATAAATA+TGG + tig0024833:41851-41870 Msa1420630:intron 20.0%
!! TAGGTTGTTATAAATACTAA+TGG + tig0024833:41895-41914 Msa1420630:intron 20.0%
!!! TGTTGATTTTTTTTTCTTAG+TGG + tig0024833:41977-41996 Msa1420630:intron 20.0%
!!! TTTTGATGATTTTTTTTTCC+CGG + tig0024833:42020-42039 Msa1420630:intron 20.0%
!! TGATAATTAATAATCATGTC+TGG + tig0024833:42178-42197 Msa1420630:intron 20.0%
!! AAGTTTCTTATATGAAATCA+TGG - tig0024833:42535-42554 None:intergenic 20.0%
!!! TTTTTAAATAACTGCTAAAG+CGG + tig0024833:42570-42589 Msa1420630:intron 20.0%
!!! CTATTTCACAACATTTTTAA+TGG - tig0024833:42635-42654 None:intergenic 20.0%
!!! AGATTTGGAATTAAATGTAA+TGG - tig0024833:42762-42781 None:intergenic 20.0%
!! TTGTTAATCTTATCTTATGA+TGG + tig0024833:43109-43128 Msa1420630:intron 20.0%
!! AGAATTTATAAGGAAAAGAA+TGG - tig0024833:43529-43548 None:intergenic 20.0%
!! ATTTGATGAGAGAATTTATA+AGG - tig0024833:43539-43558 None:intergenic 20.0%
!! AATTTATTCCAAATGAGTAA+AGG - tig0024833:43620-43639 None:intergenic 20.0%
!!! AAGTTTATTTCTTGTTTATG+TGG + tig0024833:43685-43704 Msa1420630:intron 20.0%
!! AGCTTAAAGTAGTATATTTA+TGG + tig0024833:44144-44163 Msa1420630:intron 20.0%
!!! AATTTGATGATATTTAAGAC+TGG + tig0024833:44208-44227 Msa1420630:intron 20.0%
!! TTGATGAATGAATAATTGAA+TGG + tig0024833:44479-44498 Msa1420630:intron 20.0%
!!! AAATTTTCCTCATAAGAAAA+GGG + tig0024833:44865-44884 Msa1420630:three_prime_UTR 20.0%
!! AAATTGTTTATTCTTGATGA+AGG + tig0024833:44990-45009 Msa1420630:three_prime_UTR 20.0%
!! AATTGTTTATTCTTGATGAA+GGG + tig0024833:44991-45010 Msa1420630:three_prime_UTR 20.0%
!!! AATAATCACTCAATTTTTTG+AGG - tig0024833:45057-45076 None:intergenic 20.0%
!! ATTGAGTGATTATTATTGAA+TGG + tig0024833:45063-45082 Msa1420630:three_prime_UTR 20.0%
!!! ACAATGTTTTTATCAGAATG+TGG + tig0024833:41194-41213 Msa1420630:CDS 25.0%
! AATGAAATTGTGTTTGTTCT+TGG - tig0024833:41251-41270 None:intergenic 25.0%
!! TTTTAAGCAAAACAACCAAA+AGG + tig0024833:41294-41313 Msa1420630:CDS 25.0%
! TTTAAGCAAAACAACCAAAA+GGG + tig0024833:41295-41314 Msa1420630:CDS 25.0%
! TAAGGTTTAAACCAAAAACA+TGG + tig0024833:41330-41349 Msa1420630:CDS 25.0%
! AAGGTTTAAACCAAAAACAT+GGG + tig0024833:41331-41350 Msa1420630:CDS 25.0%
! CTTATATCACCTAATGTAAA+AGG - tig0024833:41458-41477 None:intergenic 25.0%
!!! ATGTTAATAGTTGGTTTGTT+TGG + tig0024833:41582-41601 Msa1420630:CDS 25.0%
!! ATTTTCAGTTCAGTTACTAT+TGG + tig0024833:41721-41740 Msa1420630:intron 25.0%
!! TTTTTATTCTTGGTCATGAT+AGG + tig0024833:41876-41895 Msa1420630:intron 25.0%
! ACATAACAGATAGACTAAAT+TGG - tig0024833:41921-41940 None:intergenic 25.0%
! TATATTAACATCTTCCTATC+CGG - tig0024833:42042-42061 None:intergenic 25.0%
! GATAATGCATATTATATGCA+GGG + tig0024833:42101-42120 Msa1420630:intron 25.0%
! ATAATGCATATTATATGCAG+GGG + tig0024833:42102-42121 Msa1420630:intron 25.0%
!! AAGATTCATCATTTTCAACA+TGG - tig0024833:42458-42477 None:intergenic 25.0%
! ATGTTGAAAATGATGAATCT+TGG + tig0024833:42457-42476 Msa1420630:CDS 25.0%
!!! ATATTCACTGTTCTAGTTTA+TGG + tig0024833:42494-42513 Msa1420630:intron 25.0%
! TATCAAATAGCAGAAAATAG+AGG - tig0024833:42702-42721 None:intergenic 25.0%
! CAAACTATGGTAAAATAGTT+AGG - tig0024833:42896-42915 None:intergenic 25.0%
!!! ACATGTTTTGCTATTAGTTA+TGG + tig0024833:42917-42936 Msa1420630:intron 25.0%
!! TATTTTCAGTGTTTACATGT+CGG - tig0024833:42984-43003 None:intergenic 25.0%
!! ATAACATCTTTTCTCTCATT+TGG - tig0024833:43208-43227 None:intergenic 25.0%
! TAAAGCTTGAGTAATTGAAT+TGG - tig0024833:43295-43314 None:intergenic 25.0%
! ATTCAATTACTCAAGCTTTA+TGG + tig0024833:43295-43314 Msa1420630:CDS 25.0%
! GGAATAAATTTAGAAGCAAT+TGG + tig0024833:43630-43649 Msa1420630:intron 25.0%
!! GCTTTATCTTTCATTTTGTA+TGG + tig0024833:43741-43760 Msa1420630:intron 25.0%
! CGGGTATATTTGAAAAAAAT+AGG - tig0024833:43978-43997 None:intergenic 25.0%
!!! ACTTTAATTTTTATCTCCCA+AGG - tig0024833:44021-44040 None:intergenic 25.0%
! TGGGAGATAAAAATTAAAGT+TGG + tig0024833:44021-44040 Msa1420630:intron 25.0%
! GGGAGATAAAAATTAAAGTT+GGG + tig0024833:44022-44041 Msa1420630:intron 25.0%
!!! TATAAACACGAGAGTATTTT+CGG + tig0024833:44049-44068 Msa1420630:intron 25.0%
!! TAATGTGACTATTTTGTGTA+TGG - tig0024833:44080-44099 None:intergenic 25.0%
! CAAAAACAGAGTTGAAATAT+GGG - tig0024833:44341-44360 None:intergenic 25.0%
!! TTTTTATTAAATCTCCAAGG+AGG - tig0024833:44612-44631 None:intergenic 25.0%
!!! TGCTTTTTATTAAATCTCCA+AGG - tig0024833:44615-44634 None:intergenic 25.0%
! CATATGACATATGAATTATG+TGG - tig0024833:44770-44789 None:intergenic 25.0%
!! GAAATTTTCCTCATAAGAAA+AGG + tig0024833:44864-44883 Msa1420630:three_prime_UTR 25.0%
! ACTCTTGAAAAATACATAAG+TGG - tig0024833:45157-45176 None:intergenic 25.0%
!!! ACTTATGTATTTTTCAAGAG+TGG + tig0024833:45156-45175 Msa1420630:three_prime_UTR 25.0%
!!! ACAATGTTTTTATCAGAATG+TGG + tig0024833:41194-41213 Msa1420630:CDS 25.0%
! AATGAAATTGTGTTTGTTCT+TGG - tig0024833:41251-41270 None:intergenic 25.0%
!! TTTTAAGCAAAACAACCAAA+AGG + tig0024833:41294-41313 Msa1420630:CDS 25.0%
! TTTAAGCAAAACAACCAAAA+GGG + tig0024833:41295-41314 Msa1420630:CDS 25.0%
! TAAGGTTTAAACCAAAAACA+TGG + tig0024833:41330-41349 Msa1420630:CDS 25.0%
! AAGGTTTAAACCAAAAACAT+GGG + tig0024833:41331-41350 Msa1420630:CDS 25.0%
! CTTATATCACCTAATGTAAA+AGG - tig0024833:41458-41477 None:intergenic 25.0%
!!! ATGTTAATAGTTGGTTTGTT+TGG + tig0024833:41582-41601 Msa1420630:CDS 25.0%
!! ATTTTCAGTTCAGTTACTAT+TGG + tig0024833:41721-41740 Msa1420630:intron 25.0%
!! TTTTTATTCTTGGTCATGAT+AGG + tig0024833:41876-41895 Msa1420630:intron 25.0%
! ACATAACAGATAGACTAAAT+TGG - tig0024833:41921-41940 None:intergenic 25.0%
! TATATTAACATCTTCCTATC+CGG - tig0024833:42042-42061 None:intergenic 25.0%
! GATAATGCATATTATATGCA+GGG + tig0024833:42101-42120 Msa1420630:intron 25.0%
! ATAATGCATATTATATGCAG+GGG + tig0024833:42102-42121 Msa1420630:intron 25.0%
!! AAGATTCATCATTTTCAACA+TGG - tig0024833:42458-42477 None:intergenic 25.0%
! ATGTTGAAAATGATGAATCT+TGG + tig0024833:42457-42476 Msa1420630:CDS 25.0%
!!! ATATTCACTGTTCTAGTTTA+TGG + tig0024833:42494-42513 Msa1420630:intron 25.0%
! TATCAAATAGCAGAAAATAG+AGG - tig0024833:42702-42721 None:intergenic 25.0%
! CAAACTATGGTAAAATAGTT+AGG - tig0024833:42896-42915 None:intergenic 25.0%
!!! ACATGTTTTGCTATTAGTTA+TGG + tig0024833:42917-42936 Msa1420630:intron 25.0%
!! TATTTTCAGTGTTTACATGT+CGG - tig0024833:42984-43003 None:intergenic 25.0%
!! ATAACATCTTTTCTCTCATT+TGG - tig0024833:43208-43227 None:intergenic 25.0%
! TAAAGCTTGAGTAATTGAAT+TGG - tig0024833:43295-43314 None:intergenic 25.0%
! ATTCAATTACTCAAGCTTTA+TGG + tig0024833:43295-43314 Msa1420630:CDS 25.0%
! GGAATAAATTTAGAAGCAAT+TGG + tig0024833:43630-43649 Msa1420630:intron 25.0%
!! GCTTTATCTTTCATTTTGTA+TGG + tig0024833:43741-43760 Msa1420630:intron 25.0%
! CGGGTATATTTGAAAAAAAT+AGG - tig0024833:43978-43997 None:intergenic 25.0%
!!! ACTTTAATTTTTATCTCCCA+AGG - tig0024833:44021-44040 None:intergenic 25.0%
! TGGGAGATAAAAATTAAAGT+TGG + tig0024833:44021-44040 Msa1420630:intron 25.0%
! GGGAGATAAAAATTAAAGTT+GGG + tig0024833:44022-44041 Msa1420630:intron 25.0%
!!! TATAAACACGAGAGTATTTT+CGG + tig0024833:44049-44068 Msa1420630:intron 25.0%
!! TAATGTGACTATTTTGTGTA+TGG - tig0024833:44080-44099 None:intergenic 25.0%
! CAAAAACAGAGTTGAAATAT+GGG - tig0024833:44341-44360 None:intergenic 25.0%
!! TTTTTATTAAATCTCCAAGG+AGG - tig0024833:44612-44631 None:intergenic 25.0%
!!! TGCTTTTTATTAAATCTCCA+AGG - tig0024833:44615-44634 None:intergenic 25.0%
! CATATGACATATGAATTATG+TGG - tig0024833:44770-44789 None:intergenic 25.0%
!! GAAATTTTCCTCATAAGAAA+AGG + tig0024833:44864-44883 Msa1420630:three_prime_UTR 25.0%
! ACTCTTGAAAAATACATAAG+TGG - tig0024833:45157-45176 None:intergenic 25.0%
!!! ACTTATGTATTTTTCAAGAG+TGG + tig0024833:45156-45175 Msa1420630:three_prime_UTR 25.0%
! TCTAAAGTTGTTGTTGGATT+TGG - tig0024833:41101-41120 None:intergenic 30.0%
!! TTTGGTTCTAAAGTTGTTGT+TGG - tig0024833:41107-41126 None:intergenic 30.0%
!!! TGAAAGGAAGAAGTTTTTTG+TGG - tig0024833:41144-41163 None:intergenic 30.0%
GAGTGAAACTAAAGTATGAA+AGG - tig0024833:41160-41179 None:intergenic 30.0%
GATAAAAACATTGTTGCCAT+TGG - tig0024833:41188-41207 None:intergenic 30.0%
TTGTGTTTGTTCTTGGTTTA+GGG - tig0024833:41244-41263 None:intergenic 30.0%
ATTGTGTTTGTTCTTGGTTT+AGG - tig0024833:41245-41264 None:intergenic 30.0%
! ACTCTTAATTCCCATGTTTT+TGG - tig0024833:41344-41363 None:intergenic 30.0%
ATATCACCTAATGTAAAAGG+TGG - tig0024833:41455-41474 None:intergenic 30.0%
AGCTATACCTAAACATTGTT+GGG + tig0024833:41481-41500 Msa1420630:CDS 30.0%
AATCTATGAGCTATGTTGTT+AGG + tig0024833:41519-41538 Msa1420630:CDS 30.0%
ATCTATGAGCTATGTTGTTA+GGG + tig0024833:41520-41539 Msa1420630:CDS 30.0%
! TTGCTGCTTATGTTAATAGT+TGG + tig0024833:41573-41592 Msa1420630:CDS 30.0%
!! TACTATTGGTTCAACCAATT+TGG + tig0024833:41735-41754 Msa1420630:intron 30.0%
TTTGCTCAATTATTATTGGC+TGG + tig0024833:41790-41809 Msa1420630:intron 30.0%
!!! ATGATTTTTTTTTCCCGGAT+AGG + tig0024833:42025-42044 Msa1420630:intron 30.0%
ATATTAACATCTTCCTATCC+GGG - tig0024833:42041-42060 None:intergenic 30.0%
GGATAATGCATATTATATGC+AGG + tig0024833:42100-42119 Msa1420630:intron 30.0%
! AATAATCATGTCTGGTGTTT+TGG + tig0024833:42186-42205 Msa1420630:intron 30.0%
!! TGGTGTTTTGGATATTTTAG+TGG + tig0024833:42198-42217 Msa1420630:intron 30.0%
!!! TTTGGATATTTTAGTGGTCA+TGG + tig0024833:42204-42223 Msa1420630:intron 30.0%
TAAACATACCATCCATGATA+TGG - tig0024833:42297-42316 None:intergenic 30.0%
AACAGTGAATATAAGCTTAC+CGG - tig0024833:42486-42505 None:intergenic 30.0%
TTACAACTTACAAGGTAGAA+AGG - tig0024833:42871-42890 None:intergenic 30.0%
GTTAGGTATTACAACTTACA+AGG - tig0024833:42879-42898 None:intergenic 30.0%
AGCAAAACATGTTCAAACTA+TGG - tig0024833:42909-42928 None:intergenic 30.0%
TTACATGCAATTACAAGTGT+CGG + tig0024833:43024-43043 Msa1420630:intron 30.0%
TTATTACCTCAACAGTATGT+TGG + tig0024833:43224-43243 Msa1420630:CDS 30.0%
! TGTAGGTTTAGGATTTGTAA+TGG + tig0024833:43267-43286 Msa1420630:CDS 30.0%
! GTAGGTTTAGGATTTGTAAT+GGG + tig0024833:43268-43287 Msa1420630:CDS 30.0%
TTCATGGTTAGAAAAAGTGA+TGG - tig0024833:43346-43365 None:intergenic 30.0%
!!! CACTTTTTCTAACCATGAAT+TGG + tig0024833:43347-43366 Msa1420630:intron 30.0%
AAAAAAAAGTGGCCAATTCA+TGG - tig0024833:43362-43381 None:intergenic 30.0%
!!! GCTTGGTTTTTTCTTTCTAT+CGG - tig0024833:43598-43617 None:intergenic 30.0%
! ATCTTTCATTTTGTATGGAC+AGG + tig0024833:43746-43765 Msa1420630:intron 30.0%
AATAACATCCATCATGACAT+TGG + tig0024833:43825-43844 Msa1420630:CDS 30.0%
! GTTTTGCTTATAATCAAGAG+CGG - tig0024833:43942-43961 None:intergenic 30.0%
TTACTTATATTCAAGACCAG+AGG + tig0024833:44250-44269 Msa1420630:intron 30.0%
ACCACTAAATCAAGATTAGA+CGG + tig0024833:44314-44333 Msa1420630:intron 30.0%
CCAAAAACAGAGTTGAAATA+TGG - tig0024833:44342-44361 None:intergenic 30.0%
! CCATATTTCAACTCTGTTTT+TGG + tig0024833:44339-44358 Msa1420630:intron 30.0%
TCATCAAGAATAGTGTAAAG+AGG - tig0024833:44466-44485 None:intergenic 30.0%
TTGTAATATCTTCCAAGAAC+TGG - tig0024833:44556-44575 None:intergenic 30.0%
! TACTCATTGATTGAAGCAAA+AGG + tig0024833:44927-44946 Msa1420630:three_prime_UTR 30.0%
! TCTAAAGTTGTTGTTGGATT+TGG - tig0024833:41101-41120 None:intergenic 30.0%
!! TTTGGTTCTAAAGTTGTTGT+TGG - tig0024833:41107-41126 None:intergenic 30.0%
!!! TGAAAGGAAGAAGTTTTTTG+TGG - tig0024833:41144-41163 None:intergenic 30.0%
GAGTGAAACTAAAGTATGAA+AGG - tig0024833:41160-41179 None:intergenic 30.0%
GATAAAAACATTGTTGCCAT+TGG - tig0024833:41188-41207 None:intergenic 30.0%
TTGTGTTTGTTCTTGGTTTA+GGG - tig0024833:41244-41263 None:intergenic 30.0%
ATTGTGTTTGTTCTTGGTTT+AGG - tig0024833:41245-41264 None:intergenic 30.0%
! ACTCTTAATTCCCATGTTTT+TGG - tig0024833:41344-41363 None:intergenic 30.0%
ATATCACCTAATGTAAAAGG+TGG - tig0024833:41455-41474 None:intergenic 30.0%
AGCTATACCTAAACATTGTT+GGG + tig0024833:41481-41500 Msa1420630:CDS 30.0%
AATCTATGAGCTATGTTGTT+AGG + tig0024833:41519-41538 Msa1420630:CDS 30.0%
ATCTATGAGCTATGTTGTTA+GGG + tig0024833:41520-41539 Msa1420630:CDS 30.0%
! TTGCTGCTTATGTTAATAGT+TGG + tig0024833:41573-41592 Msa1420630:CDS 30.0%
!! TACTATTGGTTCAACCAATT+TGG + tig0024833:41735-41754 Msa1420630:intron 30.0%
TTTGCTCAATTATTATTGGC+TGG + tig0024833:41790-41809 Msa1420630:intron 30.0%
!!! ATGATTTTTTTTTCCCGGAT+AGG + tig0024833:42025-42044 Msa1420630:intron 30.0%
ATATTAACATCTTCCTATCC+GGG - tig0024833:42041-42060 None:intergenic 30.0%
GGATAATGCATATTATATGC+AGG + tig0024833:42100-42119 Msa1420630:intron 30.0%
! AATAATCATGTCTGGTGTTT+TGG + tig0024833:42186-42205 Msa1420630:intron 30.0%
!! TGGTGTTTTGGATATTTTAG+TGG + tig0024833:42198-42217 Msa1420630:intron 30.0%
!!! TTTGGATATTTTAGTGGTCA+TGG + tig0024833:42204-42223 Msa1420630:intron 30.0%
TAAACATACCATCCATGATA+TGG - tig0024833:42297-42316 None:intergenic 30.0%
AACAGTGAATATAAGCTTAC+CGG - tig0024833:42486-42505 None:intergenic 30.0%
TTACAACTTACAAGGTAGAA+AGG - tig0024833:42871-42890 None:intergenic 30.0%
GTTAGGTATTACAACTTACA+AGG - tig0024833:42879-42898 None:intergenic 30.0%
AGCAAAACATGTTCAAACTA+TGG - tig0024833:42909-42928 None:intergenic 30.0%
TTACATGCAATTACAAGTGT+CGG + tig0024833:43024-43043 Msa1420630:intron 30.0%
TTATTACCTCAACAGTATGT+TGG + tig0024833:43224-43243 Msa1420630:CDS 30.0%
! TGTAGGTTTAGGATTTGTAA+TGG + tig0024833:43267-43286 Msa1420630:CDS 30.0%
! GTAGGTTTAGGATTTGTAAT+GGG + tig0024833:43268-43287 Msa1420630:CDS 30.0%
TTCATGGTTAGAAAAAGTGA+TGG - tig0024833:43346-43365 None:intergenic 30.0%
!!! CACTTTTTCTAACCATGAAT+TGG + tig0024833:43347-43366 Msa1420630:intron 30.0%
AAAAAAAAGTGGCCAATTCA+TGG - tig0024833:43362-43381 None:intergenic 30.0%
!!! GCTTGGTTTTTTCTTTCTAT+CGG - tig0024833:43598-43617 None:intergenic 30.0%
! ATCTTTCATTTTGTATGGAC+AGG + tig0024833:43746-43765 Msa1420630:intron 30.0%
AATAACATCCATCATGACAT+TGG + tig0024833:43825-43844 Msa1420630:CDS 30.0%
! GTTTTGCTTATAATCAAGAG+CGG - tig0024833:43942-43961 None:intergenic 30.0%
TTACTTATATTCAAGACCAG+AGG + tig0024833:44250-44269 Msa1420630:intron 30.0%
ACCACTAAATCAAGATTAGA+CGG + tig0024833:44314-44333 Msa1420630:intron 30.0%
CCAAAAACAGAGTTGAAATA+TGG - tig0024833:44342-44361 None:intergenic 30.0%
! CCATATTTCAACTCTGTTTT+TGG + tig0024833:44339-44358 Msa1420630:intron 30.0%
TCATCAAGAATAGTGTAAAG+AGG - tig0024833:44466-44485 None:intergenic 30.0%
TTGTAATATCTTCCAAGAAC+TGG - tig0024833:44556-44575 None:intergenic 30.0%
! TACTCATTGATTGAAGCAAA+AGG + tig0024833:44927-44946 Msa1420630:three_prime_UTR 30.0%
!!! AGGAAGAAGTTTTTTGTGGA+GGG - tig0024833:41140-41159 None:intergenic 35.0%
!!! AAGGAAGAAGTTTTTTGTGG+AGG - tig0024833:41141-41160 None:intergenic 35.0%
! TAGATCTGAAGATACCCTTT+TGG - tig0024833:41312-41331 None:intergenic 35.0%
!! AAAGGGTATCTTCAGATCTA+AGG + tig0024833:41312-41331 Msa1420630:CDS 35.0%
AAGAAGAAGAAAAAGGTGGA+GGG + tig0024833:41390-41409 Msa1420630:CDS 35.0%
!! GAATTTCCAAATTTTGACCC+TGG + tig0024833:41422-41441 Msa1420630:CDS 35.0%
CAGCTATACCTAAACATTGT+TGG + tig0024833:41480-41499 Msa1420630:CDS 35.0%
ACCTAAACATTGTTGGGTTA+AGG + tig0024833:41487-41506 Msa1420630:CDS 35.0%
TCCTTAACCCAACAATGTTT+AGG - tig0024833:41491-41510 None:intergenic 35.0%
ACATAGCTCATAGATTTCCA+AGG - tig0024833:41515-41534 None:intergenic 35.0%
!!! TGTTGTTGTGGTTTTTGGTT+TGG + tig0024833:41544-41563 Msa1420630:CDS 35.0%
! GTTTGTTTGGCCACTTTATT+GGG + tig0024833:41595-41614 Msa1420630:CDS 35.0%
TCTTTGTTCTTGGTCATGAT+TGG + tig0024833:41645-41664 Msa1420630:CDS 35.0%
!!! ATTGGCTGGTATTTTTTTCC+TGG + tig0024833:41804-41823 Msa1420630:intron 35.0%
TCCTAAGTTAAACAGTGTTG+CGG + tig0024833:42242-42261 Msa1420630:CDS 35.0%
TCAATCCTAGTACCATATCA+TGG + tig0024833:42282-42301 Msa1420630:CDS 35.0%
CATGGATGGTATGTTTATGT+AGG + tig0024833:42300-42319 Msa1420630:intron 35.0%
AGAACACATCATCAAAACCA+TGG + tig0024833:42432-42451 Msa1420630:CDS 35.0%
ACAGTGAATATAAGCTTACC+GGG - tig0024833:42485-42504 None:intergenic 35.0%
CTATAACGCTATAGTGTAGT+GGG + tig0024833:42595-42614 Msa1420630:intron 35.0%
TAGCAGAAAATAGAGGTTAC+AGG - tig0024833:42695-42714 None:intergenic 35.0%
! AAGCTCTTGAAGATTTTCTC+TGG - tig0024833:42793-42812 None:intergenic 35.0%
AGAGAAAATCTTCAAGAGCT+TGG + tig0024833:42792-42811 Msa1420630:CDS 35.0%
TAGAAAGGATATGCAAGCAT+TGG - tig0024833:42856-42875 None:intergenic 35.0%
GGTGTATGAATTGATCTATG+AGG + tig0024833:42938-42957 Msa1420630:intron 35.0%
! ATGATGGTGTTTGAATTCAG+TGG + tig0024833:43125-43144 Msa1420630:intron 35.0%
GCACAAACAAGTCACTATTT+GGG - tig0024833:43186-43205 None:intergenic 35.0%
GGAATGGAATTTACCACATA+AGG - tig0024833:43325-43344 None:intergenic 35.0%
! GGTTAGAAAAAGTGATGGAA+TGG - tig0024833:43341-43360 None:intergenic 35.0%
! ACTTGAAGCTTTTTGTCATG+TGG + tig0024833:43427-43446 Msa1420630:intron 35.0%
! TTTTGTCATGTGGTTGGATT+TGG + tig0024833:43437-43456 Msa1420630:CDS 35.0%
! ACCATGGTAATTTGTCTTCA+TGG - tig0024833:43485-43504 None:intergenic 35.0%
AAACCAAGCCTTTACTCATT+TGG + tig0024833:43609-43628 Msa1420630:intron 35.0%
ATTCCAAATGAGTAAAGGCT+TGG - tig0024833:43615-43634 None:intergenic 35.0%
! TCATTTTGTATGGACAGGAA+TGG + tig0024833:43751-43770 Msa1420630:intron 35.0%
! CTTCAATTAAGTGGTAGTGT+GGG - tig0024833:43884-43903 None:intergenic 35.0%
TACTCACAGCTTCAATTAAG+TGG - tig0024833:43893-43912 None:intergenic 35.0%
CCACTAAATCAAGATTAGAC+GGG + tig0024833:44315-44334 Msa1420630:intron 35.0%
GGTAAAGGACTAGATTTCTT+TGG - tig0024833:44583-44602 None:intergenic 35.0%
!!! CTTCTCTCTTGTTTTACAAG+AGG - tig0024833:44747-44766 None:intergenic 35.0%
CAAATTGGACTGTTGTAACT+TGG + tig0024833:44901-44920 Msa1420630:three_prime_UTR 35.0%
!!! AGGAAGAAGTTTTTTGTGGA+GGG - tig0024833:41140-41159 None:intergenic 35.0%
!!! AAGGAAGAAGTTTTTTGTGG+AGG - tig0024833:41141-41160 None:intergenic 35.0%
! TAGATCTGAAGATACCCTTT+TGG - tig0024833:41312-41331 None:intergenic 35.0%
!! AAAGGGTATCTTCAGATCTA+AGG + tig0024833:41312-41331 Msa1420630:CDS 35.0%
AAGAAGAAGAAAAAGGTGGA+GGG + tig0024833:41390-41409 Msa1420630:CDS 35.0%
!! GAATTTCCAAATTTTGACCC+TGG + tig0024833:41422-41441 Msa1420630:CDS 35.0%
CAGCTATACCTAAACATTGT+TGG + tig0024833:41480-41499 Msa1420630:CDS 35.0%
ACCTAAACATTGTTGGGTTA+AGG + tig0024833:41487-41506 Msa1420630:CDS 35.0%
TCCTTAACCCAACAATGTTT+AGG - tig0024833:41491-41510 None:intergenic 35.0%
ACATAGCTCATAGATTTCCA+AGG - tig0024833:41515-41534 None:intergenic 35.0%
!!! TGTTGTTGTGGTTTTTGGTT+TGG + tig0024833:41544-41563 Msa1420630:CDS 35.0%
! GTTTGTTTGGCCACTTTATT+GGG + tig0024833:41595-41614 Msa1420630:CDS 35.0%
TCTTTGTTCTTGGTCATGAT+TGG + tig0024833:41645-41664 Msa1420630:CDS 35.0%
!!! ATTGGCTGGTATTTTTTTCC+TGG + tig0024833:41804-41823 Msa1420630:intron 35.0%
TCCTAAGTTAAACAGTGTTG+CGG + tig0024833:42242-42261 Msa1420630:CDS 35.0%
TCAATCCTAGTACCATATCA+TGG + tig0024833:42282-42301 Msa1420630:CDS 35.0%
CATGGATGGTATGTTTATGT+AGG + tig0024833:42300-42319 Msa1420630:intron 35.0%
AGAACACATCATCAAAACCA+TGG + tig0024833:42432-42451 Msa1420630:CDS 35.0%
ACAGTGAATATAAGCTTACC+GGG - tig0024833:42485-42504 None:intergenic 35.0%
CTATAACGCTATAGTGTAGT+GGG + tig0024833:42595-42614 Msa1420630:intron 35.0%
TAGCAGAAAATAGAGGTTAC+AGG - tig0024833:42695-42714 None:intergenic 35.0%
! AAGCTCTTGAAGATTTTCTC+TGG - tig0024833:42793-42812 None:intergenic 35.0%
AGAGAAAATCTTCAAGAGCT+TGG + tig0024833:42792-42811 Msa1420630:CDS 35.0%
TAGAAAGGATATGCAAGCAT+TGG - tig0024833:42856-42875 None:intergenic 35.0%
GGTGTATGAATTGATCTATG+AGG + tig0024833:42938-42957 Msa1420630:intron 35.0%
! ATGATGGTGTTTGAATTCAG+TGG + tig0024833:43125-43144 Msa1420630:intron 35.0%
GCACAAACAAGTCACTATTT+GGG - tig0024833:43186-43205 None:intergenic 35.0%
GGAATGGAATTTACCACATA+AGG - tig0024833:43325-43344 None:intergenic 35.0%
! GGTTAGAAAAAGTGATGGAA+TGG - tig0024833:43341-43360 None:intergenic 35.0%
! ACTTGAAGCTTTTTGTCATG+TGG + tig0024833:43427-43446 Msa1420630:intron 35.0%
! TTTTGTCATGTGGTTGGATT+TGG + tig0024833:43437-43456 Msa1420630:CDS 35.0%
! ACCATGGTAATTTGTCTTCA+TGG - tig0024833:43485-43504 None:intergenic 35.0%
AAACCAAGCCTTTACTCATT+TGG + tig0024833:43609-43628 Msa1420630:intron 35.0%
ATTCCAAATGAGTAAAGGCT+TGG - tig0024833:43615-43634 None:intergenic 35.0%
! TCATTTTGTATGGACAGGAA+TGG + tig0024833:43751-43770 Msa1420630:intron 35.0%
! CTTCAATTAAGTGGTAGTGT+GGG - tig0024833:43884-43903 None:intergenic 35.0%
TACTCACAGCTTCAATTAAG+TGG - tig0024833:43893-43912 None:intergenic 35.0%
CCACTAAATCAAGATTAGAC+GGG + tig0024833:44315-44334 Msa1420630:intron 35.0%
GGTAAAGGACTAGATTTCTT+TGG - tig0024833:44583-44602 None:intergenic 35.0%
!!! CTTCTCTCTTGTTTTACAAG+AGG - tig0024833:44747-44766 None:intergenic 35.0%
CAAATTGGACTGTTGTAACT+TGG + tig0024833:44901-44920 Msa1420630:three_prime_UTR 35.0%
!!! AAGAAGTTTTTTGTGGAGGG+TGG - tig0024833:41137-41156 None:intergenic 40.0%
TAGTTTCACTCACTCACCAA+TGG + tig0024833:41169-41188 Msa1420630:exon 40.0%
! GTTCTTGGTTTAGGGTACAA+TGG - tig0024833:41236-41255 None:intergenic 40.0%
GCAGAGGAAGAAGAAGAAAA+AGG + tig0024833:41383-41402 Msa1420630:CDS 40.0%
GAGGAAGAAGAAGAAAAAGG+TGG + tig0024833:41386-41405 Msa1420630:CDS 40.0%
GAAGAAGAAGAAAAAGGTGG+AGG + tig0024833:41389-41408 Msa1420630:CDS 40.0%
AGAAGAAGAAAAAGGTGGAG+GGG + tig0024833:41391-41410 Msa1420630:CDS 40.0%
TCACCTAATGTAAAAGGTGG+TGG - tig0024833:41452-41471 None:intergenic 40.0%
ATTGTTGGGTTAAGGATCCT+TGG + tig0024833:41495-41514 Msa1420630:CDS 40.0%
TGTTGTTAGGGATGTTGTTG+TGG + tig0024833:41532-41551 Msa1420630:CDS 40.0%
! AGGGATGTTGTTGTGGTTTT+TGG + tig0024833:41539-41558 Msa1420630:CDS 40.0%
! GGTTTGTTTGGCCACTTTAT+TGG + tig0024833:41594-41613 Msa1420630:CDS 40.0%
! TGCTCAAGGAACCATGTTTT+GGG + tig0024833:41619-41638 Msa1420630:CDS 40.0%
AACAAAGAGAGCCCAAAACA+TGG - tig0024833:41633-41652 None:intergenic 40.0%
! TTTTGGGCTCTCTTTGTTCT+TGG + tig0024833:41635-41654 Msa1420630:CDS 40.0%
AAAAGTCAAACTTTGCCACC+AGG - tig0024833:41825-41844 None:intergenic 40.0%
ACCAACTGAGTTAAGCTCAT+GGG - tig0024833:42078-42097 None:intergenic 40.0%
TACCAACTGAGTTAAGCTCA+TGG - tig0024833:42079-42098 None:intergenic 40.0%
ATGAGCTTAACTCAGTTGGT+AGG + tig0024833:42078-42097 Msa1420630:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+GGG + tig0024833:42079-42098 Msa1420630:intron 40.0%
TGCATATTATATGCAGGGGT+CGG + tig0024833:42106-42125 Msa1420630:intron 40.0%
CCTAAGTTAAACAGTGTTGC+GGG + tig0024833:42243-42262 Msa1420630:CDS 40.0%
CTAAGTTAAACAGTGTTGCG+GGG + tig0024833:42244-42263 Msa1420630:CDS 40.0%
TCCTAGTACCATATCATGGA+TGG + tig0024833:42286-42305 Msa1420630:CDS 40.0%
ACCATCCATGATATGGTACT+AGG - tig0024833:42290-42309 None:intergenic 40.0%
! GTGCGTTTTACTAATTGTGC+AGG + tig0024833:42397-42416 Msa1420630:intron 40.0%
! CATCATTTTCAACATGGCCA+TGG - tig0024833:42452-42471 None:intergenic 40.0%
AAATGATGAATCTTGGCACC+CGG + tig0024833:42464-42483 Msa1420630:CDS 40.0%
GCTATAACGCTATAGTGTAG+TGG + tig0024833:42594-42613 Msa1420630:intron 40.0%
!! GGATATGCAAGCATTGGAAA+AGG - tig0024833:42850-42869 None:intergenic 40.0%
GGCACAAACAAGTCACTATT+TGG - tig0024833:43187-43206 None:intergenic 40.0%
AACAGTATGTTGGACAGCTA+TGG + tig0024833:43234-43253 Msa1420630:CDS 40.0%
GCTTTATGGCATTCCTTATG+TGG + tig0024833:43309-43328 Msa1420630:CDS 40.0%
! GAAGCTTTTTGTCATGTGGT+TGG + tig0024833:43431-43450 Msa1420630:intron 40.0%
! GTAATTTGTCTTCATGGCCA+TGG - tig0024833:43479-43498 None:intergenic 40.0%
GCCATGAAGACAAATTACCA+TGG + tig0024833:43481-43500 Msa1420630:CDS 40.0%
GACAAATTACCATGGTATCG+TGG + tig0024833:43489-43508 Msa1420630:CDS 40.0%
CATGAGTTCCAATGTCATGA+TGG - tig0024833:43836-43855 None:intergenic 40.0%
! GCTTCAATTAAGTGGTAGTG+TGG - tig0024833:43885-43904 None:intergenic 40.0%
TGCTTATAATCAAGAGCGGA+CGG - tig0024833:43938-43957 None:intergenic 40.0%
CCCGTCTAATCTTGATTTAG+TGG - tig0024833:44318-44337 None:intergenic 40.0%
ACCGTCTGATCTTAATCCAA+CGG + tig0024833:44389-44408 Msa1420630:intron 40.0%
ACCGTTGGATTAAGATCAGA+CGG - tig0024833:44393-44412 None:intergenic 40.0%
TTCTTTCCTCTTGTAGACTG+AGG + tig0024833:44522-44541 Msa1420630:intron 40.0%
AAATCTCCAAGGAGGTGAAA+TGG - tig0024833:44604-44623 None:intergenic 40.0%
TAGAAGAGCCACTAAGGTTA+GGG - tig0024833:44693-44712 None:intergenic 40.0%
TTGATGTAGAAGAGCCACTA+AGG - tig0024833:44699-44718 None:intergenic 40.0%
TCCTCATAAGAAAAGGGAAG+AGG + tig0024833:44871-44890 Msa1420630:three_prime_UTR 40.0%
! ACCTCTTCCCTTTTCTTATG+AGG - tig0024833:44875-44894 None:intergenic 40.0%
!! GGAAGAGGTGCTTTACAAAT+TGG + tig0024833:44886-44905 Msa1420630:three_prime_UTR 40.0%
TGAAGGGAGTTATGTCTTCA+TGG + tig0024833:45007-45026 Msa1420630:three_prime_UTR 40.0%
CTTTGTCATGCACATTGTCA+AGG + tig0024833:45123-45142 Msa1420630:three_prime_UTR 40.0%
!!! AAGAAGTTTTTTGTGGAGGG+TGG - tig0024833:41137-41156 None:intergenic 40.0%
TAGTTTCACTCACTCACCAA+TGG + tig0024833:41169-41188 Msa1420630:exon 40.0%
! GTTCTTGGTTTAGGGTACAA+TGG - tig0024833:41236-41255 None:intergenic 40.0%
GCAGAGGAAGAAGAAGAAAA+AGG + tig0024833:41383-41402 Msa1420630:CDS 40.0%
GAGGAAGAAGAAGAAAAAGG+TGG + tig0024833:41386-41405 Msa1420630:CDS 40.0%
GAAGAAGAAGAAAAAGGTGG+AGG + tig0024833:41389-41408 Msa1420630:CDS 40.0%
AGAAGAAGAAAAAGGTGGAG+GGG + tig0024833:41391-41410 Msa1420630:CDS 40.0%
TCACCTAATGTAAAAGGTGG+TGG - tig0024833:41452-41471 None:intergenic 40.0%
ATTGTTGGGTTAAGGATCCT+TGG + tig0024833:41495-41514 Msa1420630:CDS 40.0%
TGTTGTTAGGGATGTTGTTG+TGG + tig0024833:41532-41551 Msa1420630:CDS 40.0%
! AGGGATGTTGTTGTGGTTTT+TGG + tig0024833:41539-41558 Msa1420630:CDS 40.0%
! GGTTTGTTTGGCCACTTTAT+TGG + tig0024833:41594-41613 Msa1420630:CDS 40.0%
! TGCTCAAGGAACCATGTTTT+GGG + tig0024833:41619-41638 Msa1420630:CDS 40.0%
AACAAAGAGAGCCCAAAACA+TGG - tig0024833:41633-41652 None:intergenic 40.0%
! TTTTGGGCTCTCTTTGTTCT+TGG + tig0024833:41635-41654 Msa1420630:CDS 40.0%
AAAAGTCAAACTTTGCCACC+AGG - tig0024833:41825-41844 None:intergenic 40.0%
ACCAACTGAGTTAAGCTCAT+GGG - tig0024833:42078-42097 None:intergenic 40.0%
TACCAACTGAGTTAAGCTCA+TGG - tig0024833:42079-42098 None:intergenic 40.0%
ATGAGCTTAACTCAGTTGGT+AGG + tig0024833:42078-42097 Msa1420630:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+GGG + tig0024833:42079-42098 Msa1420630:intron 40.0%
TGCATATTATATGCAGGGGT+CGG + tig0024833:42106-42125 Msa1420630:intron 40.0%
CCTAAGTTAAACAGTGTTGC+GGG + tig0024833:42243-42262 Msa1420630:CDS 40.0%
CTAAGTTAAACAGTGTTGCG+GGG + tig0024833:42244-42263 Msa1420630:CDS 40.0%
TCCTAGTACCATATCATGGA+TGG + tig0024833:42286-42305 Msa1420630:CDS 40.0%
ACCATCCATGATATGGTACT+AGG - tig0024833:42290-42309 None:intergenic 40.0%
! GTGCGTTTTACTAATTGTGC+AGG + tig0024833:42397-42416 Msa1420630:intron 40.0%
! CATCATTTTCAACATGGCCA+TGG - tig0024833:42452-42471 None:intergenic 40.0%
AAATGATGAATCTTGGCACC+CGG + tig0024833:42464-42483 Msa1420630:CDS 40.0%
GCTATAACGCTATAGTGTAG+TGG + tig0024833:42594-42613 Msa1420630:intron 40.0%
!! GGATATGCAAGCATTGGAAA+AGG - tig0024833:42850-42869 None:intergenic 40.0%
GGCACAAACAAGTCACTATT+TGG - tig0024833:43187-43206 None:intergenic 40.0%
AACAGTATGTTGGACAGCTA+TGG + tig0024833:43234-43253 Msa1420630:CDS 40.0%
GCTTTATGGCATTCCTTATG+TGG + tig0024833:43309-43328 Msa1420630:CDS 40.0%
! GAAGCTTTTTGTCATGTGGT+TGG + tig0024833:43431-43450 Msa1420630:intron 40.0%
! GTAATTTGTCTTCATGGCCA+TGG - tig0024833:43479-43498 None:intergenic 40.0%
GCCATGAAGACAAATTACCA+TGG + tig0024833:43481-43500 Msa1420630:CDS 40.0%
GACAAATTACCATGGTATCG+TGG + tig0024833:43489-43508 Msa1420630:CDS 40.0%
CATGAGTTCCAATGTCATGA+TGG - tig0024833:43836-43855 None:intergenic 40.0%
! GCTTCAATTAAGTGGTAGTG+TGG - tig0024833:43885-43904 None:intergenic 40.0%
TGCTTATAATCAAGAGCGGA+CGG - tig0024833:43938-43957 None:intergenic 40.0%
CCCGTCTAATCTTGATTTAG+TGG - tig0024833:44318-44337 None:intergenic 40.0%
ACCGTCTGATCTTAATCCAA+CGG + tig0024833:44389-44408 Msa1420630:intron 40.0%
ACCGTTGGATTAAGATCAGA+CGG - tig0024833:44393-44412 None:intergenic 40.0%
TTCTTTCCTCTTGTAGACTG+AGG + tig0024833:44522-44541 Msa1420630:intron 40.0%
AAATCTCCAAGGAGGTGAAA+TGG - tig0024833:44604-44623 None:intergenic 40.0%
TAGAAGAGCCACTAAGGTTA+GGG - tig0024833:44693-44712 None:intergenic 40.0%
TTGATGTAGAAGAGCCACTA+AGG - tig0024833:44699-44718 None:intergenic 40.0%
TCCTCATAAGAAAAGGGAAG+AGG + tig0024833:44871-44890 Msa1420630:three_prime_UTR 40.0%
! ACCTCTTCCCTTTTCTTATG+AGG - tig0024833:44875-44894 None:intergenic 40.0%
!! GGAAGAGGTGCTTTACAAAT+TGG + tig0024833:44886-44905 Msa1420630:three_prime_UTR 40.0%
TGAAGGGAGTTATGTCTTCA+TGG + tig0024833:45007-45026 Msa1420630:three_prime_UTR 40.0%
CTTTGTCATGCACATTGTCA+AGG + tig0024833:45123-45142 Msa1420630:three_prime_UTR 40.0%
!!! TTTTTTGTGGAGGGTGGTGT+TGG - tig0024833:41131-41150 None:intergenic 45.0%
! TTAGGGTACAATGGTGGAAG+TGG - tig0024833:41227-41246 None:intergenic 45.0%
! CTTGGTTTAGGGTACAATGG+TGG - tig0024833:41233-41252 None:intergenic 45.0%
TAAGAGTGAGTGCTCCTTCA+AGG + tig0024833:41357-41376 Msa1420630:CDS 45.0%
AAGAGTGAGTGCTCCTTCAA+GGG + tig0024833:41358-41377 Msa1420630:CDS 45.0%
! GCACCACCACCTTTTACATT+AGG + tig0024833:41446-41465 Msa1420630:CDS 45.0%
! CTGCTCAAGGAACCATGTTT+TGG + tig0024833:41618-41637 Msa1420630:CDS 45.0%
!!! GGCTGGTATTTTTTTCCTGG+TGG + tig0024833:41807-41826 Msa1420630:intron 45.0%
CCAACTGAGTTAAGCTCATG+GGG - tig0024833:42077-42096 None:intergenic 45.0%
GCATATTATATGCAGGGGTC+GGG + tig0024833:42107-42126 Msa1420630:intron 45.0%
CATATTATATGCAGGGGTCG+GGG + tig0024833:42108-42127 Msa1420630:intron 45.0%
! CCCGCAACACTGTTTAACTT+AGG - tig0024833:42246-42265 None:intergenic 45.0%
TCTCTGGCAACTGCAAGATT+TGG - tig0024833:42777-42796 None:intergenic 45.0%
!! AAGTGTCGGTGTTGAACACT+CGG + tig0024833:43038-43057 Msa1420630:intron 45.0%
TGTAGCACAGACACTTCAGA+TGG - tig0024833:43073-43092 None:intergenic 45.0%
GTGTTTGAATTCAGTGGAGC+AGG + tig0024833:43131-43150 Msa1420630:intron 45.0%
AGCTGTCCAACATACTGTTG+AGG - tig0024833:43233-43252 None:intergenic 45.0%
! GCTGCTTTGCTTGTAGGTTT+AGG + tig0024833:43256-43275 Msa1420630:CDS 45.0%
GTGACCTATTTGCATCACCA+TGG + tig0024833:43459-43478 Msa1420630:CDS 45.0%
! ATGGCCATGGTGATGCAAAT+AGG - tig0024833:43466-43485 None:intergenic 45.0%
ATTACCATGGTATCGTGGAC+AGG + tig0024833:43494-43513 Msa1420630:CDS 45.0%
ACAACTCTCGATCGTGACTA+TGG + tig0024833:43795-43814 Msa1420630:CDS 45.0%
! AAGTGGTAGTGTGGGATTTG+AGG - tig0024833:43876-43895 None:intergenic 45.0%
TAGAATCCAAACACTGCCTC+TGG - tig0024833:44269-44288 None:intergenic 45.0%
CAGTTACGCACATTTGACAC+AGG - tig0024833:44428-44447 None:intergenic 45.0%
CCAAGGAGGTGAAATGGTAA+AGG - tig0024833:44598-44617 None:intergenic 45.0%
CCTTTACCATTTCACCTCCT+TGG + tig0024833:44595-44614 Msa1420630:CDS 45.0%
! GACCATTTTGTCAGTGACAC+TGG + tig0024833:44643-44662 Msa1420630:CDS 45.0%
! CACCAGTGTCACTGACAAAA+TGG - tig0024833:44648-44667 None:intergenic 45.0%
CAAACAGACCCTAACCTTAG+TGG + tig0024833:44682-44701 Msa1420630:CDS 45.0%
GTAGAAGAGCCACTAAGGTT+AGG - tig0024833:44694-44713 None:intergenic 45.0%
CATGCACATTGTCAAGGTTG+TGG + tig0024833:45129-45148 Msa1420630:three_prime_UTR 45.0%
!!! TTTTTTGTGGAGGGTGGTGT+TGG - tig0024833:41131-41150 None:intergenic 45.0%
! TTAGGGTACAATGGTGGAAG+TGG - tig0024833:41227-41246 None:intergenic 45.0%
! CTTGGTTTAGGGTACAATGG+TGG - tig0024833:41233-41252 None:intergenic 45.0%
TAAGAGTGAGTGCTCCTTCA+AGG + tig0024833:41357-41376 Msa1420630:CDS 45.0%
AAGAGTGAGTGCTCCTTCAA+GGG + tig0024833:41358-41377 Msa1420630:CDS 45.0%
! GCACCACCACCTTTTACATT+AGG + tig0024833:41446-41465 Msa1420630:CDS 45.0%
! CTGCTCAAGGAACCATGTTT+TGG + tig0024833:41618-41637 Msa1420630:CDS 45.0%
!!! GGCTGGTATTTTTTTCCTGG+TGG + tig0024833:41807-41826 Msa1420630:intron 45.0%
CCAACTGAGTTAAGCTCATG+GGG - tig0024833:42077-42096 None:intergenic 45.0%
GCATATTATATGCAGGGGTC+GGG + tig0024833:42107-42126 Msa1420630:intron 45.0%
CATATTATATGCAGGGGTCG+GGG + tig0024833:42108-42127 Msa1420630:intron 45.0%
! CCCGCAACACTGTTTAACTT+AGG - tig0024833:42246-42265 None:intergenic 45.0%
TCTCTGGCAACTGCAAGATT+TGG - tig0024833:42777-42796 None:intergenic 45.0%
!! AAGTGTCGGTGTTGAACACT+CGG + tig0024833:43038-43057 Msa1420630:intron 45.0%
TGTAGCACAGACACTTCAGA+TGG - tig0024833:43073-43092 None:intergenic 45.0%
GTGTTTGAATTCAGTGGAGC+AGG + tig0024833:43131-43150 Msa1420630:intron 45.0%
AGCTGTCCAACATACTGTTG+AGG - tig0024833:43233-43252 None:intergenic 45.0%
! GCTGCTTTGCTTGTAGGTTT+AGG + tig0024833:43256-43275 Msa1420630:CDS 45.0%
GTGACCTATTTGCATCACCA+TGG + tig0024833:43459-43478 Msa1420630:CDS 45.0%
! ATGGCCATGGTGATGCAAAT+AGG - tig0024833:43466-43485 None:intergenic 45.0%
ATTACCATGGTATCGTGGAC+AGG + tig0024833:43494-43513 Msa1420630:CDS 45.0%
ACAACTCTCGATCGTGACTA+TGG + tig0024833:43795-43814 Msa1420630:CDS 45.0%
! AAGTGGTAGTGTGGGATTTG+AGG - tig0024833:43876-43895 None:intergenic 45.0%
TAGAATCCAAACACTGCCTC+TGG - tig0024833:44269-44288 None:intergenic 45.0%
CAGTTACGCACATTTGACAC+AGG - tig0024833:44428-44447 None:intergenic 45.0%
CCAAGGAGGTGAAATGGTAA+AGG - tig0024833:44598-44617 None:intergenic 45.0%
CCTTTACCATTTCACCTCCT+TGG + tig0024833:44595-44614 Msa1420630:CDS 45.0%
! GACCATTTTGTCAGTGACAC+TGG + tig0024833:44643-44662 Msa1420630:CDS 45.0%
! CACCAGTGTCACTGACAAAA+TGG - tig0024833:44648-44667 None:intergenic 45.0%
CAAACAGACCCTAACCTTAG+TGG + tig0024833:44682-44701 Msa1420630:CDS 45.0%
GTAGAAGAGCCACTAAGGTT+AGG - tig0024833:44694-44713 None:intergenic 45.0%
CATGCACATTGTCAAGGTTG+TGG + tig0024833:45129-45148 Msa1420630:three_prime_UTR 45.0%
TCTTCCTCTGCAACCCTTGA+AGG - tig0024833:41374-41393 None:intergenic 50.0%
AAAAGGTGGAGGGGTAGTTC+AGG + tig0024833:41400-41419 Msa1420630:CDS 50.0%
GGTGCACCAGGGTCAAAATT+TGG - tig0024833:41431-41450 None:intergenic 50.0%
! TAAAAGGTGGTGGTGCACCA+GGG - tig0024833:41442-41461 None:intergenic 50.0%
CCTTGAGCAGCCCAATAAAG+TGG - tig0024833:41608-41627 None:intergenic 50.0%
CCACTTTATTGGGCTGCTCA+AGG + tig0024833:41605-41624 Msa1420630:CDS 50.0%
CCCCATGAGCTTAACTCAGT+TGG + tig0024833:42074-42093 Msa1420630:intron 50.0%
ACTATAGCACTAGCGTGCAG+CGG + tig0024833:42657-42676 Msa1420630:intron 50.0%
AAGTGAGAACCACTCTTCCC+AGG - tig0024833:43160-43179 None:intergenic 50.0%
! GCTATGGCTGCTTTGCTTGT+AGG + tig0024833:43250-43269 Msa1420630:CDS 50.0%
GATACCTGTCCACGATACCA+TGG - tig0024833:43501-43520 None:intergenic 50.0%
CAGGAATGGAGCTACCTTAG+AGG + tig0024833:43765-43784 Msa1420630:intron 50.0%
GAATGGAGCTACCTTAGAGG+CGG + tig0024833:43768-43787 Msa1420630:CDS 50.0%
GAGTTGTAAGTCCGCCTCTA+AGG - tig0024833:43782-43801 None:intergenic 50.0%
TCAAGACCAGAGGCAGTGTT+TGG + tig0024833:44260-44279 Msa1420630:intron 50.0%
AGGCACGCTATCTTAACCGT+TGG - tig0024833:44408-44427 None:intergenic 50.0%
TAGCTGCCTCAGTCTACAAG+AGG - tig0024833:44531-44550 None:intergenic 50.0%
GAGGCAGCTAAACCAGTTCT+TGG + tig0024833:44541-44560 Msa1420630:CDS 50.0%
TCTTCCTCTGCAACCCTTGA+AGG - tig0024833:41374-41393 None:intergenic 50.0%
AAAAGGTGGAGGGGTAGTTC+AGG + tig0024833:41400-41419 Msa1420630:CDS 50.0%
GGTGCACCAGGGTCAAAATT+TGG - tig0024833:41431-41450 None:intergenic 50.0%
! TAAAAGGTGGTGGTGCACCA+GGG - tig0024833:41442-41461 None:intergenic 50.0%
CCTTGAGCAGCCCAATAAAG+TGG - tig0024833:41608-41627 None:intergenic 50.0%
CCACTTTATTGGGCTGCTCA+AGG + tig0024833:41605-41624 Msa1420630:CDS 50.0%
CCCCATGAGCTTAACTCAGT+TGG + tig0024833:42074-42093 Msa1420630:intron 50.0%
ACTATAGCACTAGCGTGCAG+CGG + tig0024833:42657-42676 Msa1420630:intron 50.0%
AAGTGAGAACCACTCTTCCC+AGG - tig0024833:43160-43179 None:intergenic 50.0%
! GCTATGGCTGCTTTGCTTGT+AGG + tig0024833:43250-43269 Msa1420630:CDS 50.0%
GATACCTGTCCACGATACCA+TGG - tig0024833:43501-43520 None:intergenic 50.0%
CAGGAATGGAGCTACCTTAG+AGG + tig0024833:43765-43784 Msa1420630:intron 50.0%
GAATGGAGCTACCTTAGAGG+CGG + tig0024833:43768-43787 Msa1420630:CDS 50.0%
GAGTTGTAAGTCCGCCTCTA+AGG - tig0024833:43782-43801 None:intergenic 50.0%
TCAAGACCAGAGGCAGTGTT+TGG + tig0024833:44260-44279 Msa1420630:intron 50.0%
AGGCACGCTATCTTAACCGT+TGG - tig0024833:44408-44427 None:intergenic 50.0%
TAGCTGCCTCAGTCTACAAG+AGG - tig0024833:44531-44550 None:intergenic 50.0%
GAGGCAGCTAAACCAGTTCT+TGG + tig0024833:44541-44560 Msa1420630:CDS 50.0%
! GTGGAGGGTGGTGTTGGATT+TGG - tig0024833:41125-41144 None:intergenic 55.0%
TGCTCCTTCAAGGGTTGCAG+AGG + tig0024833:41367-41386 Msa1420630:CDS 55.0%
! GTAAAAGGTGGTGGTGCACC+AGG - tig0024833:41443-41462 None:intergenic 55.0%
ATTCAGTGGAGCAGGAGTCC+TGG + tig0024833:43139-43158 Msa1420630:intron 55.0%
TTCAGTGGAGCAGGAGTCCT+GGG + tig0024833:43140-43159 Msa1420630:intron 55.0%
! GTGGAGGGTGGTGTTGGATT+TGG - tig0024833:41125-41144 None:intergenic 55.0%
TGCTCCTTCAAGGGTTGCAG+AGG + tig0024833:41367-41386 Msa1420630:CDS 55.0%
! GTAAAAGGTGGTGGTGCACC+AGG - tig0024833:41443-41462 None:intergenic 55.0%
ATTCAGTGGAGCAGGAGTCC+TGG + tig0024833:43139-43158 Msa1420630:intron 55.0%
TTCAGTGGAGCAGGAGTCCT+GGG + tig0024833:43140-43159 Msa1420630:intron 55.0%
AGCAGGAGTCCTGGGAAGAG+TGG + tig0024833:43148-43167 Msa1420630:CDS 60.0%
AGCAGGAGTCCTGGGAAGAG+TGG + tig0024833:43148-43167 Msa1420630:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0024833 gene 41085 45180 41085 ID=Msa1420630;Name=Msa1420630
tig0024833 mRNA 41085 45180 41085 ID=Msa1420630-mRNA-1;Parent=Msa1420630;Name=Msa1420630-mRNA-1;_AED=0.05;_eAED=0.05;_QI=103|1|1|1|1|1|8|457|439
tig0024833 exon 41085 41666 41085 ID=Msa1420630-mRNA-1:exon:1605;Parent=Msa1420630-mRNA-1
tig0024833 exon 42218 42307 42218 ID=Msa1420630-mRNA-1:exon:1606;Parent=Msa1420630-mRNA-1
tig0024833 exon 42419 42485 42419 ID=Msa1420630-mRNA-1:exon:1607;Parent=Msa1420630-mRNA-1
tig0024833 exon 42787 42879 42787 ID=Msa1420630-mRNA-1:exon:1608;Parent=Msa1420630-mRNA-1
tig0024833 exon 43145 43330 43145 ID=Msa1420630-mRNA-1:exon:1609;Parent=Msa1420630-mRNA-1
tig0024833 exon 43435 43515 43435 ID=Msa1420630-mRNA-1:exon:1610;Parent=Msa1420630-mRNA-1
tig0024833 exon 43768 43905 43768 ID=Msa1420630-mRNA-1:exon:1611;Parent=Msa1420630-mRNA-1
tig0024833 exon 44538 45180 44538 ID=Msa1420630-mRNA-1:exon:1612;Parent=Msa1420630-mRNA-1
tig0024833 five_prime_UTR 41085 41187 41085 ID=Msa1420630-mRNA-1:five_prime_utr;Parent=Msa1420630-mRNA-1
tig0024833 CDS 41188 41666 41188 ID=Msa1420630-mRNA-1:cds;Parent=Msa1420630-mRNA-1
tig0024833 CDS 42218 42307 42218 ID=Msa1420630-mRNA-1:cds;Parent=Msa1420630-mRNA-1
tig0024833 CDS 42419 42485 42419 ID=Msa1420630-mRNA-1:cds;Parent=Msa1420630-mRNA-1
tig0024833 CDS 42787 42879 42787 ID=Msa1420630-mRNA-1:cds;Parent=Msa1420630-mRNA-1
tig0024833 CDS 43145 43330 43145 ID=Msa1420630-mRNA-1:cds;Parent=Msa1420630-mRNA-1
tig0024833 CDS 43435 43515 43435 ID=Msa1420630-mRNA-1:cds;Parent=Msa1420630-mRNA-1
tig0024833 CDS 43768 43905 43768 ID=Msa1420630-mRNA-1:cds;Parent=Msa1420630-mRNA-1
tig0024833 CDS 44538 44723 44538 ID=Msa1420630-mRNA-1:cds;Parent=Msa1420630-mRNA-1
tig0024833 three_prime_UTR 44724 45180 44724 ID=Msa1420630-mRNA-1:three_prime_utr;Parent=Msa1420630-mRNA-1
Gene Sequence

>Msa1420630

ATGGCAACAATGTTTTTATCAGAATGTGGCTTAAGACCACTTCCACCATTGTACCCTAAACCAAGAACAAACACAATTTCATTACAAAAACCTTCAAAGATTAGATTTTTAAGCAAAACAACCAAAAGGGTATCTTCAGATCTAAGGTTTAAACCAAAAACATGGGAATTAAGAGTGAGTGCTCCTTCAAGGGTTGCAGAGGAAGAAGAAGAAAAAGGTGGAGGGGTAGTTCAGGAATTTCCAAATTTTGACCCTGGTGCACCACCACCTTTTACATTAGGTGATATAAGAGCAGCTATACCTAAACATTGTTGGGTTAAGGATCCTTGGAAATCTATGAGCTATGTTGTTAGGGATGTTGTTGTGGTTTTTGGTTTGGCTGTTGTTGCTGCTTATGTTAATAGTTGGTTTGTTTGGCCACTTTATTGGGCTGCTCAAGGAACCATGTTTTGGGCTCTCTTTGTTCTTGGTCATGATTGTGGTCATGGAAGCTTTTCAAACAATCCTAAGTTAAACAGTGTTGCGGGGCATTTGCTGCATTCATCAATCCTAGTACCATATCATGGATGGAGAATTAGTCATAGAACACATCATCAAAACCATGGCCATGTTGAAAATGATGAATCTTGGCACCCGTTGCCAGAGAAAATCTTCAAGAGCTTGGACAATGCAACAAAAATGTTAAGATTTACAATACCTTTTCCAATGCTTGCATATCCTTTCTACCTTTGGAGCAGGAGTCCTGGGAAGAGTGGTTCTCACTTTGACCCAAATAGTGACTTGTTTGTGCCAAATGAGAGAAAAGATGTTATTACCTCAACAGTATGTTGGACAGCTATGGCTGCTTTGCTTGTAGGTTTAGGATTTGTAATGGGTCCAATTCAATTACTCAAGCTTTATGGCATTCCTTATGTGCTTTTTGTCATGTGGTTGGATTTGGTGACCTATTTGCATCACCATGGCCATGAAGACAAATTACCATGGTATCGTGGACAGGAATGGAGCTACCTTAGAGGCGGACTTACAACTCTCGATCGTGACTATGGATTGATAAATAACATCCATCATGACATTGGAACTCATGTCATTCATCACTTATTTCCTCAAATCCCACACTACCACTTAATTGAAGCTACTGAGGCAGCTAAACCAGTTCTTGGAAGATATTACAAAGAGCCAAAGAAATCTAGTCCTTTACCATTTCACCTCCTTGGAGATTTAATAAAAAGCATGAAAAAAGACCATTTTGTCAGTGACACTGGTGATATTGTTTACTATCAAACAGACCCTAACCTTAGTGGCTCTTCTACATCAAAATAA

Protein sequence

>Msa1420630

MATMFLSECGLRPLPPLYPKPRTNTISLQKPSKIRFLSKTTKRVSSDLRFKPKTWELRVSAPSRVAEEEEEKGGGVVQEFPNFDPGAPPPFTLGDIRAAIPKHCWVKDPWKSMSYVVRDVVVVFGLAVVAAYVNSWFVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVAGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFKSLDNATKMLRFTIPFPMLAYPFYLWSRSPGKSGSHFDPNSDLFVPNERKDVITSTVCWTAMAALLVGLGFVMGPIQLLKLYGIPYVLFVMWLDLVTYLHHHGHEDKLPWYRGQEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGRYYKEPKKSSPLPFHLLGDLIKSMKKDHFVSDTGDIVYYQTDPNLSGSSTSK*