AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0295130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0295130 MtrunA17_Chr2g0317251 94.537 421 23 0 1 421 1 421 0.0 840
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0295130 AT5G53860.2 65.957 423 141 3 1 421 1 422 0.0 583
Msa0295130 AT5G53860.4 60.217 460 143 3 1 421 1 459 0.0 563
Msa0295130 AT5G53860.1 62.884 423 134 4 1 421 1 402 0.0 544
Msa0295130 AT5G53860.5 59.142 443 158 5 1 421 1 442 0.0 526
Msa0295130 AT5G53860.3 64.762 315 109 2 1 314 1 314 8.02e-150 428

Find 136 sgRNAs with CRISPR-Local

Find 602 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGCTGCATATACAAAATT+AGG 0.145949 2_3:+47471105 None:intergenic
ATCCCGATATTGCTGAATTT+TGG 0.193778 2_3:-47476145 Msa0295130:CDS
CTCCACCAAGACCATCAAAT+TGG 0.246915 2_3:-47474630 Msa0295130:CDS
CAACCAAAATTCAGCAATAT+CGG 0.250137 2_3:+47476142 None:intergenic
CCATCTGCTGAAATCTTAAA+TGG 0.256318 2_3:+47477007 None:intergenic
TGAGAAGAACATTCATTTCA+TGG 0.262549 2_3:+47472317 None:intergenic
ATATCAAATGCAAGAGTTAA+AGG 0.266219 2_3:+47478996 None:intergenic
TTGTAGGCGGTTGCTACTTT+GGG 0.269453 2_3:-47478052 Msa0295130:intron
TTGACACGATGTGATGATTT+TGG 0.298652 2_3:-47471149 Msa0295130:exon
GACCTGGCCACGAGAAAATC+TGG 0.303548 2_3:-47475094 Msa0295130:CDS
ACTCTTGCATTTGATATTGC+TGG 0.312358 2_3:-47478990 Msa0295130:CDS
CACACATACACAAACCATTC+TGG 0.336708 2_3:+47470751 None:intergenic
GGAGTGAAGAGAACTTTAAA+AGG 0.352714 2_3:+47479017 None:intergenic
CATACCGTTCCATCGCAAAT+TGG 0.353463 2_3:+47477162 None:intergenic
GCATATACCATCATCCTCTT+TGG 0.355988 2_3:-47477217 Msa0295130:CDS
ATGTACAGTGGGAAACTAAA+TGG 0.356233 2_3:-47472261 Msa0295130:CDS
CCTAAACGACCTCGCGGTTT+CGG 0.373026 2_3:-47479125 Msa0295130:CDS
ATTGTAGGCGGTTGCTACTT+TGG 0.373157 2_3:-47478053 Msa0295130:intron
AAGGAATTCAACAACGCTTA+TGG 0.373978 2_3:-47479068 Msa0295130:CDS
GATATTGCACAGGGTGTAAT+GGG 0.374956 2_3:-47477055 Msa0295130:intron
GCCTTCTTAGCCTTGTAGTA+AGG 0.375119 2_3:+47474682 None:intergenic
AATCTAAATTGAACATCGTT+TGG 0.376893 2_3:+47470896 None:intergenic
GAAAAGGAAAGGTTTCTGTT+AGG 0.378415 2_3:-47470988 Msa0295130:three_prime_UTR
GACAATATTGTCAGATTATG+AGG 0.383127 2_3:-47476066 Msa0295130:intron
GGTTCTGCTCCTCGTGGCTT+TGG 0.391130 2_3:-47478969 Msa0295130:CDS
TCCACCAAGACCATCAAATT+GGG 0.392965 2_3:-47474629 Msa0295130:CDS
CGATATTGCACAGGGTGTAA+TGG 0.398676 2_3:-47477056 Msa0295130:intron
TGGCTTTGGTGTTCCTGAGC+TGG 0.400797 2_3:-47478955 Msa0295130:CDS
CAGATGCCATTGTCAACAAC+CGG 0.403168 2_3:-47477251 Msa0295130:CDS
AAATGACGACTGACCTCATA+TGG 0.403883 2_3:+47476790 None:intergenic
TTATCTATATTCTGAATGTA+TGG 0.405638 2_3:+47471922 None:intergenic
ACCTATCCACAGATTATGTA+TGG 0.408343 2_3:-47476116 Msa0295130:CDS
GGCAATTCTTCACTTGATAG+TGG 0.410251 2_3:+47477773 None:intergenic
TTCCATTGAGTCCATCATCT+TGG 0.413257 2_3:-47472372 Msa0295130:CDS
ATACATACACCCCAATTTGA+TGG 0.414935 2_3:+47474619 None:intergenic
TGAGAGTGAATGAAAGGGAG+TGG 0.419240 2_3:+47479175 None:intergenic
TTAGGGATACAAGCATGTTC+TGG 0.419987 2_3:+47471123 None:intergenic
TCCATTGAGTCCATCATCTT+GGG 0.423002 2_3:-47472371 Msa0295130:CDS
GTGCTGCATATACAAAATTA+GGG 0.424995 2_3:+47471106 None:intergenic
GTGTAACATCAGCTTAGGTT+TGG 0.432883 2_3:+47470922 None:intergenic
AAGAAATACACTTTATGAAA+AGG 0.447552 2_3:-47471004 Msa0295130:three_prime_UTR
AACTAAATGGCGTCAAGAAA+AGG 0.448622 2_3:-47472248 Msa0295130:intron
TATGACATTGCATTAAACTT+AGG 0.449811 2_3:-47478025 Msa0295130:CDS
TGTAACATCAGCTTAGGTTT+GGG 0.450348 2_3:+47470923 None:intergenic
ACTTATATCATTAGATAAAA+CGG 0.455022 2_3:+47470851 None:intergenic
GGATCATCCTTTGCACGGTC+AGG 0.455204 2_3:+47474724 None:intergenic
TGAGAGTGAGAGTGAATGAA+AGG 0.456725 2_3:+47479169 None:intergenic
AAGATAGATAGAGTTGAAAG+AGG 0.459254 2_3:+47479204 None:intergenic
CCCCAATTTGATGGTCTTGG+TGG 0.463299 2_3:+47474628 None:intergenic
CCCTTACTACAAGGCTAAGA+AGG 0.463570 2_3:-47474683 Msa0295130:CDS
GCGTGTGGGTTTAGGAATCC+AGG 0.463611 2_3:-47475135 Msa0295130:intron
CCGAAACCGCGAGGTCGTTT+AGG 0.466274 2_3:+47479125 None:intergenic
CAATTTGATGGTCTTGGTGG+AGG 0.466962 2_3:+47474631 None:intergenic
ATCTCGAAGTTGGTCCCACC+TGG 0.469525 2_3:+47475117 None:intergenic
TCGTTTAGGCATGGCGTGGC+GGG 0.470909 2_3:+47479139 None:intergenic
GACATTACGAGCTTGCCAAT+GGG 0.474351 2_3:+47476831 None:intergenic
TCCCAAGATGATGGACTCAA+TGG 0.474729 2_3:+47472370 None:intergenic
AACCAAAATTCAGCAATATC+GGG 0.480296 2_3:+47476143 None:intergenic
TCCTCTTCATCCCAAGATGA+TGG 0.481867 2_3:+47472361 None:intergenic
CCTTCTTAGCCTTGTAGTAA+GGG 0.484303 2_3:+47474683 None:intergenic
GGCAAGTGTAACATCAGCTT+AGG 0.485177 2_3:+47470917 None:intergenic
ACACCCCAATTTGATGGTCT+TGG 0.486633 2_3:+47474625 None:intergenic
TTTGTGGAGGAAACTATTGT+TGG 0.489910 2_3:-47471033 Msa0295130:three_prime_UTR
AGATAGAGTTGAAAGAGGGA+AGG 0.490465 2_3:+47479209 None:intergenic
GATAGAGTTGAAAGAGGGAA+GGG 0.491076 2_3:+47479210 None:intergenic
AAAGATGGATTATCCATATG+AGG 0.500991 2_3:-47476803 Msa0295130:intron
TTAGGTTTGGGTGTGCATGC+AGG 0.503415 2_3:+47470935 None:intergenic
TGTAGGCGGTTGCTACTTTG+GGG 0.503583 2_3:-47478051 Msa0295130:intron
AAAATCACAAAAGCAAGAAA+AGG 0.503674 2_3:-47471872 Msa0295130:intron
AGATAGATAGAGTTGAAAGA+GGG 0.504859 2_3:+47479205 None:intergenic
GAGAGTGAGAGTGAATGAAA+GGG 0.506005 2_3:+47479170 None:intergenic
TGTACCATGTGTCGAGGAAG+TGG 0.506981 2_3:-47477802 Msa0295130:CDS
TTTATGAAATGACGAGGTAG+TGG 0.507518 2_3:-47479246 None:intergenic
TTGGCAAGCTCGTAATGTCT+TGG 0.508846 2_3:-47476827 Msa0295130:CDS
TGCATTAAACTTAGGAAGGA+AGG 0.514974 2_3:-47478017 Msa0295130:CDS
TAAGAAGGCACTGGAGAAAG+AGG 0.516270 2_3:-47474668 Msa0295130:CDS
TCGTAATGTCTTGGAAAAGA+TGG 0.522844 2_3:-47476818 Msa0295130:CDS
CTTCTTTGCATTGTCGCCGT+AGG 0.529584 2_3:+47476088 None:intergenic
TTAAGATTATGGAGCCCCAT+TGG 0.533982 2_3:-47476846 Msa0295130:intron
TGAAGAATTGCCACTTGAAG+AGG 0.534970 2_3:-47477762 Msa0295130:intron
CCATTTAAGATTTCAGCAGA+TGG 0.536536 2_3:-47477007 Msa0295130:CDS
CCTTAAGGTGAATGAGATGC+TGG 0.537615 2_3:-47471959 Msa0295130:intron
ATACACTTTATGAAAAGGAA+AGG 0.539826 2_3:-47470999 Msa0295130:three_prime_UTR
CTACAAGGCTAAGAAGGCAC+TGG 0.545598 2_3:-47474677 Msa0295130:CDS
GTCGTTTAGGCATGGCGTGG+CGG 0.550911 2_3:+47479138 None:intergenic
AAATATATTGAATGTACAGT+GGG 0.552405 2_3:-47472272 Msa0295130:CDS
TCCATCATCTTGGGATGAAG+AGG 0.552918 2_3:-47472362 Msa0295130:CDS
AGACATTACGAGCTTGCCAA+TGG 0.557112 2_3:+47476830 None:intergenic
TGGCCAGGTCATCTCGAAGT+TGG 0.558388 2_3:+47475107 None:intergenic
ACCTGGCCACGAGAAAATCT+GGG 0.559362 2_3:-47475093 Msa0295130:CDS
GAGAGCTTAGAAACCAGCTC+AGG 0.573108 2_3:+47478942 None:intergenic
TTTGATGGTAATGGTATCTG+AGG 0.573297 2_3:+47477192 None:intergenic
CTCAGCCCGGTTGTTGACAA+TGG 0.574412 2_3:+47477245 None:intergenic
TGCAACATGTAGTGGATGGC+AGG 0.574458 2_3:-47477833 Msa0295130:CDS
CTGTCCAATTTGCGATGGAA+CGG 0.577259 2_3:-47477166 Msa0295130:intron
ATTATGTATGGATTTACCTA+CGG 0.578278 2_3:-47476104 Msa0295130:CDS
AAATGATGAACATGACAGCT+AGG 0.579018 2_3:+47471055 None:intergenic
AGGGACTGTGCAACATGTAG+TGG 0.583104 2_3:-47477841 Msa0295130:CDS
AGAAACATCGACAACGGAGG+TGG 0.586136 2_3:-47471180 Msa0295130:CDS
ACCGCGAGGTCGTTTAGGCA+TGG 0.588322 2_3:+47479130 None:intergenic
ACATTGCATTAAACTTAGGA+AGG 0.589476 2_3:-47478021 Msa0295130:CDS
TCCATACATAATCTGTGGAT+AGG 0.590215 2_3:+47476115 None:intergenic
TGAGGATCCAAAGAGGATGA+TGG 0.592909 2_3:+47477210 None:intergenic
AAAGACTGTCCAATTTGCGA+TGG 0.596544 2_3:-47477171 Msa0295130:CDS
TGTTCCACTTCCTCGACACA+TGG 0.602643 2_3:+47477798 None:intergenic
GAAGGAAGGTGATATGTCAA+AGG 0.603671 2_3:-47478003 Msa0295130:intron
TCGACACATGGTACACCGCA+TGG 0.606087 2_3:+47477810 None:intergenic
GTAAATCCATACATAATCTG+TGG 0.613426 2_3:+47476110 None:intergenic
ATACTTCAGAGATCGCTACA+AGG 0.615855 2_3:-47479087 Msa0295130:CDS
GGACCAACTTCGAGATGACC+TGG 0.616878 2_3:-47475110 Msa0295130:CDS
AAAATATATTGAATGTACAG+TGG 0.631461 2_3:-47472273 Msa0295130:CDS
TATAGATCCTGACCGTGCAA+AGG 0.632744 2_3:-47474731 Msa0295130:CDS
GTATATGCACTAACTCAGCC+CGG 0.638670 2_3:+47477232 None:intergenic
AAGATGATGGACTCAATGGA+AGG 0.647702 2_3:+47472374 None:intergenic
AGATGCCATTGTCAACAACC+GGG 0.647944 2_3:-47477250 Msa0295130:CDS
GGCCACGAGAAAATCTGGGT+GGG 0.648556 2_3:-47475089 Msa0295130:CDS
CCACCAAGACCATCAAATTG+GGG 0.650516 2_3:-47474628 Msa0295130:CDS
ATGCGGTGTACCATGTGTCG+AGG 0.655183 2_3:-47477808 Msa0295130:CDS
TGACAGGATCATCCTTTGCA+CGG 0.658143 2_3:+47474719 None:intergenic
AGAGTACTCACCTCTTCAAG+TGG 0.663437 2_3:+47477752 None:intergenic
ACATTACGAGCTTGCCAATG+GGG 0.667348 2_3:+47476832 None:intergenic
AATTGATTTATGAAATGACG+AGG 0.667525 2_3:-47479252 None:intergenic
ACGAAATTGCCGAAACCGCG+AGG 0.672302 2_3:+47479116 None:intergenic
ATTGCTGGTTCTGCTCCTCG+TGG 0.674679 2_3:-47478975 Msa0295130:CDS
GAGGTCGTTTAGGCATGGCG+TGG 0.680269 2_3:+47479135 None:intergenic
TGTGGGTTTAGGAATCCAGG+TGG 0.693474 2_3:-47475132 Msa0295130:intron
GTGGGTTTAGGAATCCAGGT+GGG 0.697770 2_3:-47475131 Msa0295130:intron
TGGTATCTGAGGATCCAAAG+AGG 0.699470 2_3:+47477203 None:intergenic
TGGCCACGAGAAAATCTGGG+TGG 0.699917 2_3:-47475090 Msa0295130:CDS
TAAGGTGAATGAGATGCTGG+AGG 0.704910 2_3:-47471956 Msa0295130:intron
TCTTGCAGAAACATCGACAA+CGG 0.710915 2_3:-47471186 Msa0295130:intron
TGCAGAAACATCGACAACGG+AGG 0.717170 2_3:-47471183 Msa0295130:intron
ACTGTGCAACATGTAGTGGA+TGG 0.720022 2_3:-47477837 Msa0295130:CDS
GCCATGCCTAAACGACCTCG+CGG 0.734651 2_3:-47479131 Msa0295130:CDS
GTAGTGGATGGCAGGCCATG+CGG 0.739709 2_3:-47477825 Msa0295130:CDS
TCAGGAACACCAAAGCCACG+AGG 0.752787 2_3:+47478960 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATCATAATTTCAT+AGG - chr2_3:47472487-47472506 Msa0295130:intron 10.0%
!! TTTAGAAAGAAAAAAAAAAT+CGG + chr2_3:47472900-47472919 None:intergenic 10.0%
!!! TTAAGTTTTAAGAATAAATA+GGG - chr2_3:47473325-47473344 Msa0295130:intron 10.0%
!!! TAAATTTTTTTTTGAAGAAA+AGG - chr2_3:47474491-47474510 Msa0295130:intron 10.0%
!!! TTTTGTGATTTTAATAAAAT+AGG + chr2_3:47477973-47477992 None:intergenic 10.0%
!! AATAAATGAAAAGTAATTAA+CGG - chr2_3:47478368-47478387 Msa0295130:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+AGG + chr2_3:47478053-47478072 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:47478053-47478072 None:intergenic 100.0%
!! AAAAAAAAAAAAATGCTACA+AGG + chr2_3:47472469-47472488 None:intergenic 15.0%
!!! GTTAAGTTTTAAGAATAAAT+AGG - chr2_3:47473324-47473343 Msa0295130:intron 15.0%
!!! TAAGTTTTAAGAATAAATAG+GGG - chr2_3:47473326-47473345 Msa0295130:intron 15.0%
!! AATATTATTCTGTAATCAAA+AGG - chr2_3:47473437-47473456 Msa0295130:intron 15.0%
!! ATATTATTCTGTAATCAAAA+GGG - chr2_3:47473438-47473457 Msa0295130:intron 15.0%
!! TGATATAGAAGAATAAAATA+GGG + chr2_3:47473469-47473488 None:intergenic 15.0%
!!! AAATTTTAGACAAATGAAAA+GGG + chr2_3:47475326-47475345 None:intergenic 15.0%
!!! AAAATTTTAGACAAATGAAA+AGG + chr2_3:47475327-47475346 None:intergenic 15.0%
!!! TTTTCTTAGAATTTTGATTT+AGG + chr2_3:47475519-47475538 None:intergenic 15.0%
!!! AATTATTCTTCACATTTTTT+TGG - chr2_3:47476526-47476545 Msa0295130:intron 15.0%
!!! ATTATTCTTCACATTTTTTT+GGG - chr2_3:47476527-47476546 Msa0295130:intron 15.0%
!! TTGTCTTTAAATAAATGATT+AGG + chr2_3:47477002-47477021 None:intergenic 15.0%
!! AAAGTTATTATTTATAAACC+CGG + chr2_3:47477209-47477228 None:intergenic 15.0%
!! AAAAATCCTAATAAATTTGA+AGG + chr2_3:47477308-47477327 None:intergenic 15.0%
!!! TTATTAGGATTTTTTATAAG+TGG - chr2_3:47477314-47477333 Msa0295130:intron 15.0%
!! TTTCAAAAAAAAAAATGCAA+AGG + chr2_3:47477386-47477405 None:intergenic 15.0%
!! AAAAAGATACAAAATTAACA+TGG + chr2_3:47477851-47477870 None:intergenic 15.0%
!! AACTAATTAACTTATTTGTT+TGG - chr2_3:47478296-47478315 Msa0295130:intron 15.0%
!! ACTTATATCATTAGATAAAA+CGG + chr2_3:47479005-47479024 None:intergenic 15.0%
!!! TTTAAAGCTAAAATCCAAAA+GGG + chr2_3:47470967-47470986 None:intergenic 20.0%
!!! TTTTAAAGCTAAAATCCAAA+AGG + chr2_3:47470968-47470987 None:intergenic 20.0%
!!! GTCAATTTTGTGTTTTTTTT+AGG - chr2_3:47471041-47471060 Msa0295130:three_prime_UTR 20.0%
!!! ATTGATTATTTCTTAGTTTC+TGG - chr2_3:47471140-47471159 Msa0295130:three_prime_UTR 20.0%
!!! TTGATTATTTCTTAGTTTCT+GGG - chr2_3:47471141-47471160 Msa0295130:three_prime_UTR 20.0%
!! CATTTCTTTCAAACTATTAT+CGG + chr2_3:47471278-47471297 None:intergenic 20.0%
!!! AATTTACTCAATACATTTTG+TGG + chr2_3:47471622-47471641 None:intergenic 20.0%
!! TTAGATTTCAATAATTCCAA+AGG + chr2_3:47471972-47471991 None:intergenic 20.0%
!! AAATAAACCATAAACTACAT+TGG + chr2_3:47472136-47472155 None:intergenic 20.0%
!! ACATCTGATTTATAACAATT+TGG - chr2_3:47472387-47472406 Msa0295130:intron 20.0%
!! CATCTGATTTATAACAATTT+GGG - chr2_3:47472388-47472407 Msa0295130:intron 20.0%
!!! TAAGGTATTTATACATTAGT+TGG + chr2_3:47472523-47472542 None:intergenic 20.0%
!! CATAATCTTAAACAAAGAAA+GGG + chr2_3:47472998-47473017 None:intergenic 20.0%
!!! ATTTTGATGATAATAGCAAT+TGG + chr2_3:47473115-47473134 None:intergenic 20.0%
!! ATAATTAATTAAGTCAGTAG+TGG - chr2_3:47473298-47473317 Msa0295130:intron 20.0%
!! TAATTAATTAAGTCAGTAGT+GGG - chr2_3:47473299-47473318 Msa0295130:intron 20.0%
!! CTGATATAGAAGAATAAAAT+AGG + chr2_3:47473470-47473489 None:intergenic 20.0%
!!! TTTAATATTTTCAGCACATA+AGG - chr2_3:47473672-47473691 Msa0295130:intron 20.0%
!!! TTAATATTTTCAGCACATAA+GGG - chr2_3:47473673-47473692 Msa0295130:intron 20.0%
!! TGAAAACATCTTAAAAAATG+AGG - chr2_3:47474120-47474139 Msa0295130:intron 20.0%
!! TTAGCAATAAAGAATAGTTA+TGG + chr2_3:47474317-47474336 None:intergenic 20.0%
!! TTTATAAGTTACATAATCAG+AGG + chr2_3:47474533-47474552 None:intergenic 20.0%
!! AGAAATACGAAGATTATTTA+TGG + chr2_3:47474695-47474714 None:intergenic 20.0%
!!! ATATTTAGCTAGTTGATAAA+TGG - chr2_3:47474904-47474923 Msa0295130:intron 20.0%
!!! TACAATTTTGTTGAAAATCA+AGG - chr2_3:47474943-47474962 Msa0295130:intron 20.0%
!!! AAGGTGATTTTTTAAATAGT+TGG - chr2_3:47474962-47474981 Msa0295130:intron 20.0%
!! ATATATAAATTTGTGCAAGA+GGG + chr2_3:47475053-47475072 None:intergenic 20.0%
!! AATATATAAATTTGTGCAAG+AGG + chr2_3:47475054-47475073 None:intergenic 20.0%
!!! TGGTTTAACTTCATTTTATT+TGG - chr2_3:47475664-47475683 Msa0295130:intron 20.0%
!! AAAGATTCCACTAAATTATT+CGG - chr2_3:47475770-47475789 Msa0295130:intron 20.0%
!!! TTTTATTTAAGCTTCACAAA+AGG - chr2_3:47475889-47475908 Msa0295130:intron 20.0%
!! AAAAATGAATTCCTCATAAT+AGG + chr2_3:47476240-47476259 None:intergenic 20.0%
!! AAATTCTTATAATTGGATGA+TGG + chr2_3:47476288-47476307 None:intergenic 20.0%
!! TCTAGCTAAATTCTTATAAT+TGG + chr2_3:47476295-47476314 None:intergenic 20.0%
!!! GAGATTTTATTTTTCTTCAT+TGG + chr2_3:47476715-47476734 None:intergenic 20.0%
!! AAATAAAATCTCATTCAAGA+TGG - chr2_3:47476723-47476742 Msa0295130:intron 20.0%
!!! AACTTTTAACAATCACTTAT+AGG - chr2_3:47477152-47477171 Msa0295130:intron 20.0%
!! AAAATATATTGAATGTACAG+TGG - chr2_3:47477580-47477599 Msa0295130:intron 20.0%
!! AAATATATTGAATGTACAGT+GGG - chr2_3:47477581-47477600 Msa0295130:intron 20.0%
!! TTATCTATATTCTGAATGTA+TGG + chr2_3:47477934-47477953 None:intergenic 20.0%
!! CAAATAAGTTAATTAGTTAG+AGG + chr2_3:47478294-47478313 None:intergenic 20.0%
!! TAACTTATTTGTTTGGTTAT+TGG - chr2_3:47478303-47478322 Msa0295130:intron 20.0%
!!! CATATTTTGAGAAAAGAAAA+AGG - chr2_3:47478544-47478563 Msa0295130:intron 20.0%
!! AAGAAATACACTTTATGAAA+AGG - chr2_3:47478849-47478868 Msa0295130:intron 20.0%
!!! ATTTAGATTATTCATTTTCC+AGG - chr2_3:47478971-47478990 Msa0295130:CDS 20.0%
!!! TTTAGATTATTCATTTTCCA+GGG - chr2_3:47478972-47478991 Msa0295130:CDS 20.0%
!!! TTATGACATTACTAAGTTTT+CGG - chr2_3:47479062-47479081 Msa0295130:CDS 20.0%
!!! TTTCAATATTTTTTCCAGAA+TGG - chr2_3:47479088-47479107 Msa0295130:CDS 20.0%
! ATATCAAATGCAAGAGTTAA+AGG + chr2_3:47470860-47470879 None:intergenic 25.0%
!! TTTTTGTGTTTTGCTTATCT+GGG - chr2_3:47470996-47471015 Msa0295130:three_prime_UTR 25.0%
! AATTGACAAATAGAACTAGT+TGG + chr2_3:47471028-47471047 None:intergenic 25.0%
!! TTTTGTTGAGGTTATGTTTT+TGG - chr2_3:47471076-47471095 Msa0295130:three_prime_UTR 25.0%
!! TTTGTTGAGGTTATGTTTTT+GGG - chr2_3:47471077-47471096 Msa0295130:three_prime_UTR 25.0%
!! TGCTTTGTTGAAAATTGAAA+TGG - chr2_3:47471193-47471212 Msa0295130:intron 25.0%
! TTGTTGAAAATTGAAATGGA+TGG - chr2_3:47471197-47471216 Msa0295130:intron 25.0%
!!! CAATTTGAATTTTGAAGTGT+CGG - chr2_3:47471351-47471370 Msa0295130:intron 25.0%
! TACATAGGTAATTTCATCAA+GGG - chr2_3:47471377-47471396 Msa0295130:intron 25.0%
! AGAAATTGATTACACAACTT+TGG - chr2_3:47471492-47471511 Msa0295130:intron 25.0%
! TGAGTTCATCAATTTATCAA+TGG - chr2_3:47471593-47471612 Msa0295130:intron 25.0%
! TATGACATTGCATTAAACTT+AGG - chr2_3:47471828-47471847 Msa0295130:intron 25.0%
! TAAATGTGTTATCAAGAACA+GGG - chr2_3:47471993-47472012 Msa0295130:intron 25.0%
! ATAAACTACATTGGAATACA+TGG + chr2_3:47472127-47472146 None:intergenic 25.0%
! ATGTATTCCAATGTAGTTTA+TGG - chr2_3:47472126-47472145 Msa0295130:intron 25.0%
!!! TTATCTTTTGGGTTCATTTT+TGG - chr2_3:47472261-47472280 Msa0295130:CDS 25.0%
! AAAATGGAGGTAGTTATTTA+CGG + chr2_3:47472442-47472461 None:intergenic 25.0%
! AAATTGAAGAAGCGAATATA+AGG + chr2_3:47472541-47472560 None:intergenic 25.0%
!!! TTCAATTTATCCACTTTTAG+TGG - chr2_3:47472553-47472572 Msa0295130:intron 25.0%
!! AGAAAAAAAAAATCGGTTCA+AGG + chr2_3:47472893-47472912 None:intergenic 25.0%
! CCATAATCTTAAACAAAGAA+AGG + chr2_3:47472999-47473018 None:intergenic 25.0%
!! CCTTTCTTTGTTTAAGATTA+TGG - chr2_3:47472996-47473015 Msa0295130:intron 25.0%
! ACTATAAATGTATAGCATCA+AGG + chr2_3:47473177-47473196 None:intergenic 25.0%
! AGTAGTTAATTATGCAGTTA+TGG - chr2_3:47473254-47473273 Msa0295130:intron 25.0%
! ATTATGTATGGATTTACCTA+CGG - chr2_3:47473749-47473768 Msa0295130:intron 25.0%
! ACTGAAACTGAAAAATAAGA+AGG + chr2_3:47473828-47473847 None:intergenic 25.0%
! ATAATTTGAATGAGCAAAGA+GGG + chr2_3:47473918-47473937 None:intergenic 25.0%
! AATAATTTGAATGAGCAAAG+AGG + chr2_3:47473919-47473938 None:intergenic 25.0%
!! CTCATTCAAATTATTCCTTT+TGG - chr2_3:47473924-47473943 Msa0295130:intron 25.0%
! ACATCAAAGAACAAAACTAA+TGG - chr2_3:47474018-47474037 Msa0295130:intron 25.0%
! TGCTTAACATAACAATAACA+CGG - chr2_3:47474069-47474088 Msa0295130:intron 25.0%
! TTGTCAGTTAGATAAATTAC+TGG + chr2_3:47474227-47474246 None:intergenic 25.0%
!! TTATGGAGTTATTTCCTTAT+TGG + chr2_3:47474300-47474319 None:intergenic 25.0%
! TGTAAGAAGAAATGTTTATG+CGG - chr2_3:47474400-47474419 Msa0295130:intron 25.0%
! CCAATATAAAATCCATTCAA+GGG + chr2_3:47474436-47474455 None:intergenic 25.0%
! ACCAATATAAAATCCATTCA+AGG + chr2_3:47474437-47474456 None:intergenic 25.0%
!!! TTGAATGGATTTTATATTGG+TGG - chr2_3:47474436-47474455 Msa0295130:intron 25.0%
!!! TGAATGGATTTTATATTGGT+GGG - chr2_3:47474437-47474456 Msa0295130:intron 25.0%
!!! CTTTAGAGCATAAATGTTAT+AGG + chr2_3:47474629-47474648 None:intergenic 25.0%
! AATACGAAGATTATTTATGG+AGG + chr2_3:47474692-47474711 None:intergenic 25.0%
!! AATATTGTTGCTTGTATTCA+TGG - chr2_3:47474825-47474844 Msa0295130:intron 25.0%
! TTATTCGGATCACATAAATT+TGG - chr2_3:47475785-47475804 Msa0295130:intron 25.0%
!! CTATTGGTTGAAATTAATGT+GGG + chr2_3:47475816-47475835 None:intergenic 25.0%
!!! CACATTTTTTCAACATAATC+TGG + chr2_3:47476013-47476032 None:intergenic 25.0%
! CAGATTATGTTGAAAAAATG+TGG - chr2_3:47476011-47476030 Msa0295130:intron 25.0%
!! GTTTATATAACCAGCATTTT+TGG + chr2_3:47476153-47476172 None:intergenic 25.0%
! TTATAAGAATTTAGCTAGAG+AGG - chr2_3:47476296-47476315 Msa0295130:intron 25.0%
!!! TTTTTGGGAAAGGATTTTAA+AGG - chr2_3:47476542-47476561 Msa0295130:intron 25.0%
!!! TTTTGGGAAAGGATTTTAAA+GGG - chr2_3:47476543-47476562 Msa0295130:intron 25.0%
!!! AAACTTTTAAGGCTTTGTTT+GGG + chr2_3:47476819-47476838 None:intergenic 25.0%
! GCTATATTAACGAATCTATT+AGG + chr2_3:47476873-47476892 None:intergenic 25.0%
! AGATTCGTTAATATAGCTAT+TGG - chr2_3:47476876-47476895 Msa0295130:intron 25.0%
! ATACTTCGTATATACTGTAT+TGG + chr2_3:47477106-47477125 None:intergenic 25.0%
! TAGGAAAAGAAAAGTTGAAT+TGG - chr2_3:47477171-47477190 Msa0295130:CDS 25.0%
! AAAAAGTGGGAAAATATGAA+AGG + chr2_3:47477266-47477285 None:intergenic 25.0%
! TCGGAAAGAAAAAAAAAAGT+GGG + chr2_3:47477279-47477298 None:intergenic 25.0%
! ATCGGAAAGAAAAAAAAAAG+TGG + chr2_3:47477280-47477299 None:intergenic 25.0%
!!! ATAAATTTGAAGGTGCTTAT+CGG + chr2_3:47477298-47477317 None:intergenic 25.0%
! TAAGCACCTTCAAATTTATT+AGG - chr2_3:47477299-47477318 Msa0295130:intron 25.0%
!! TCTGATAAATTGATCCTTTT+TGG + chr2_3:47477674-47477693 None:intergenic 25.0%
! AAAATCACAAAAGCAAGAAA+AGG - chr2_3:47477981-47478000 Msa0295130:intron 25.0%
! AAGATTAAAACGCAAGATTA+TGG + chr2_3:47478651-47478670 None:intergenic 25.0%
! ATACACTTTATGAAAAGGAA+AGG - chr2_3:47478854-47478873 Msa0295130:intron 25.0%
! AATCTAAATTGAACATCGTT+TGG + chr2_3:47478960-47478979 None:intergenic 25.0%
AGATAGATAGAGTTGAAAGA+GGG + chr2_3:47470651-47470670 None:intergenic 30.0%
AAGATAGATAGAGTTGAAAG+AGG + chr2_3:47470652-47470671 None:intergenic 30.0%
! CTTTTTGTGTTTTGCTTATC+TGG - chr2_3:47470995-47471014 Msa0295130:three_prime_UTR 30.0%
!!! TGAATTGTCTTGTTTTGTTG+AGG - chr2_3:47471064-47471083 Msa0295130:three_prime_UTR 30.0%
TGTTTGTATCTGATACATGT+CGG + chr2_3:47471325-47471344 None:intergenic 30.0%
CTACATAGGTAATTTCATCA+AGG - chr2_3:47471376-47471395 Msa0295130:intron 30.0%
ATTGATGAACTCAAAGTGAT+GGG + chr2_3:47471546-47471565 None:intergenic 30.0%
AATTGATGAACTCAAAGTGA+TGG + chr2_3:47471547-47471566 None:intergenic 30.0%
! GTTCTTCTTTTGATATTTGC+AGG - chr2_3:47471691-47471710 Msa0295130:intron 30.0%
TCAAAACAAAGAACTAACCA+TGG + chr2_3:47471740-47471759 None:intergenic 30.0%
! TGATAATGAATATTGCTGCA+TGG - chr2_3:47471773-47471792 Msa0295130:intron 30.0%
ACATTGCATTAAACTTAGGA+AGG - chr2_3:47471832-47471851 Msa0295130:intron 30.0%
CTAAATGTGTTATCAAGAAC+AGG - chr2_3:47471992-47472011 Msa0295130:intron 30.0%
! ACTCTGCAATCTTTATCTTT+TGG - chr2_3:47472249-47472268 Msa0295130:CDS 30.0%
! CTCTGCAATCTTTATCTTTT+GGG - chr2_3:47472250-47472269 Msa0295130:CDS 30.0%
!! ATACATGTCTAGTTTGTTCA+AGG - chr2_3:47472284-47472303 Msa0295130:CDS 30.0%
AATGCTACAAGGAATCAAAA+TGG + chr2_3:47472458-47472477 None:intergenic 30.0%
!! AGAATTTTTCGATATTGCAC+AGG - chr2_3:47472788-47472807 Msa0295130:intron 30.0%
!! GAATTTTTCGATATTGCACA+GGG - chr2_3:47472789-47472808 Msa0295130:intron 30.0%
!!! GGTAATTTGTTTTTGCATTC+AGG + chr2_3:47472828-47472847 None:intergenic 30.0%
!! AAAGATGGATTATCCATATG+AGG - chr2_3:47473050-47473069 Msa0295130:intron 30.0%
TGATGATAATAGCAATTGGT+CGG + chr2_3:47473111-47473130 None:intergenic 30.0%
!! TATAGCATCAAGGTTTGTTT+TGG + chr2_3:47473167-47473186 None:intergenic 30.0%
ATAATATTGCAGAACTTCGA+GGG + chr2_3:47473425-47473444 None:intergenic 30.0%
AATAATATTGCAGAACTTCG+AGG + chr2_3:47473426-47473445 None:intergenic 30.0%
CAAACTACTATTAGTTAAGC+AGG - chr2_3:47473562-47473581 Msa0295130:intron 30.0%
AACCAAAATTCAGCAATATC+GGG + chr2_3:47473713-47473732 None:intergenic 30.0%
CAACCAAAATTCAGCAATAT+CGG + chr2_3:47473714-47473733 None:intergenic 30.0%
GTAAATCCATACATAATCTG+TGG + chr2_3:47473746-47473765 None:intergenic 30.0%
GACAATATTGTCAGATTATG+AGG - chr2_3:47473787-47473806 Msa0295130:intron 30.0%
!! TATTGATTTGTCCCCTTATT+GGG - chr2_3:47473861-47473880 Msa0295130:intron 30.0%
AAGCATATCAAACCCAATAA+GGG + chr2_3:47473876-47473895 None:intergenic 30.0%
AAAGCATATCAAACCCAATA+AGG + chr2_3:47473877-47473896 None:intergenic 30.0%
!! ATAAATCCTTTGAAGTCAGT+AGG + chr2_3:47474050-47474069 None:intergenic 30.0%
! ATTGCAAAGGAAGATTGTTT+TGG + chr2_3:47474168-47474187 None:intergenic 30.0%
GTTAGATAAATTACTGGAAG+TGG + chr2_3:47474221-47474240 None:intergenic 30.0%
AAGACGTTCTTTGAACAAAA+TGG - chr2_3:47474261-47474280 Msa0295130:intron 30.0%
!!! TCCATTCATTTTTTGCACAA+TGG - chr2_3:47474347-47474366 Msa0295130:intron 30.0%
ACCATTGTGCAAAAAATGAA+TGG + chr2_3:47474351-47474370 None:intergenic 30.0%
GTAAGAAGAAATGTTTATGC+GGG - chr2_3:47474401-47474420 Msa0295130:intron 30.0%
!! CCCTTGAATGGATTTTATAT+TGG - chr2_3:47474433-47474452 Msa0295130:intron 30.0%
!! GAATGGATTTTATATTGGTG+GGG - chr2_3:47474438-47474457 Msa0295130:intron 30.0%
!!! TTTTTTGAAGAAAAGGCAGA+AGG - chr2_3:47474498-47474517 Msa0295130:intron 30.0%
ACTTGAAAAAGCTACTGTAT+GGG + chr2_3:47474573-47474592 None:intergenic 30.0%
AACTTGAAAAAGCTACTGTA+TGG + chr2_3:47474574-47474593 None:intergenic 30.0%
GTTATAGGTAATGTGTAGTT+AGG + chr2_3:47474614-47474633 None:intergenic 30.0%
TATAATCGTACTGTTATCAC+AGG - chr2_3:47475089-47475108 Msa0295130:CDS 30.0%
TAAAAACATCCCTTACTACA+AGG - chr2_3:47475161-47475180 Msa0295130:intron 30.0%
GATTTAGTGCTTATAAAGCA+TGG - chr2_3:47475449-47475468 Msa0295130:intron 30.0%
TAAGAAAAACCATAGTTGTC+TGG - chr2_3:47475531-47475550 Msa0295130:intron 30.0%
TTTGACAAATTCACTGGAAA+GGG + chr2_3:47475624-47475643 None:intergenic 30.0%
TCATTTGAACTTCAACCAAT+AGG + chr2_3:47475734-47475753 None:intergenic 30.0%
ATGTGATCCGAATAATTTAG+TGG + chr2_3:47475780-47475799 None:intergenic 30.0%
! CCTATTGGTTGAAATTAATG+TGG + chr2_3:47475817-47475836 None:intergenic 30.0%
CCACATTAATTTCAACCAAT+AGG - chr2_3:47475814-47475833 Msa0295130:intron 30.0%
CATTAATTTCAACCAATAGG+AGG - chr2_3:47475817-47475836 Msa0295130:intron 30.0%
GTATGTGAAAAACAGTTGAA+TGG - chr2_3:47475922-47475941 Msa0295130:intron 30.0%
TAAGCTTCTGTAAATCACTT+TGG - chr2_3:47475960-47475979 Msa0295130:intron 30.0%
AAGCTTCTGTAAATCACTTT+GGG - chr2_3:47475961-47475980 Msa0295130:intron 30.0%
TTTGGGAGATGATGAAAAAA+GGG - chr2_3:47475978-47475997 Msa0295130:intron 30.0%
AAGTTAACACAGAATGTAGT+GGG + chr2_3:47476204-47476223 None:intergenic 30.0%
! CTTATAATTGGATGATGGTT+GGG + chr2_3:47476283-47476302 None:intergenic 30.0%
! TCTTATAATTGGATGATGGT+TGG + chr2_3:47476284-47476303 None:intergenic 30.0%
!!! TCTTCACATTTTTTTGGGAA+AGG - chr2_3:47476532-47476551 Msa0295130:intron 30.0%
AACGATAAGGGAAGAATAAA+GGG + chr2_3:47476766-47476785 None:intergenic 30.0%
TAACGATAAGGGAAGAATAA+AGG + chr2_3:47476767-47476786 None:intergenic 30.0%
!!! CAAACTTTTAAGGCTTTGTT+TGG + chr2_3:47476820-47476839 None:intergenic 30.0%
! GTGTATAGTGCAAACTTTTA+AGG + chr2_3:47476830-47476849 None:intergenic 30.0%
!! TTAATATAGCTATTGGCTCA+TGG - chr2_3:47476883-47476902 Msa0295130:intron 30.0%
TCAAGATATAATGTCAGAGA+TGG + chr2_3:47476927-47476946 None:intergenic 30.0%
ATCTCTGACATTATATCTTG+AGG - chr2_3:47476926-47476945 Msa0295130:intron 30.0%
TCTCTGACATTATATCTTGA+GGG - chr2_3:47476927-47476946 Msa0295130:intron 30.0%
CATTTGATGCAGATAAATTG+AGG - chr2_3:47476963-47476982 Msa0295130:intron 30.0%
TAAAACACCTGACATTAGAA+TGG - chr2_3:47477066-47477085 Msa0295130:intron 30.0%
GAAGTATGATAGAGTTAGTT+TGG - chr2_3:47477119-47477138 Msa0295130:intron 30.0%
TTATTTATAAACCCGGTCAT+TGG + chr2_3:47477202-47477221 None:intergenic 30.0%
! TTCATTTCATGGAGTTTTTC+TGG + chr2_3:47477528-47477547 None:intergenic 30.0%
TGAGAAGAACATTCATTTCA+TGG + chr2_3:47477539-47477558 None:intergenic 30.0%
AAGGATCAATTTATCAGAAC+TGG - chr2_3:47477676-47477695 Msa0295130:intron 30.0%
AAGAATCAGACACTAATTGA+GGG + chr2_3:47477828-47477847 None:intergenic 30.0%
! TGATGCTTAATTTGACCTTA+AGG - chr2_3:47477879-47477898 Msa0295130:intron 30.0%
! ATTGATTATGCATGTTGACT+AGG - chr2_3:47478185-47478204 Msa0295130:intron 30.0%
CATACATATACTCATTGAGT+AGG + chr2_3:47478248-47478267 None:intergenic 30.0%
ACTCAATGAGTATATGTATG+CGG - chr2_3:47478248-47478267 Msa0295130:intron 30.0%
GAATGCAAAACTTCAAAGTT+TGG + chr2_3:47478476-47478495 None:intergenic 30.0%
TCATCATCACTATGACTAAT+GGG + chr2_3:47478622-47478641 None:intergenic 30.0%
GTGCTGCATATACAAAATTA+GGG + chr2_3:47478750-47478769 None:intergenic 30.0%
AGTGCTGCATATACAAAATT+AGG + chr2_3:47478751-47478770 None:intergenic 30.0%
!! TGTCATGTTCATCATTTTTG+TGG - chr2_3:47478804-47478823 Msa0295130:intron 30.0%
AAGGAATTCAACAACGCTTA+TGG - chr2_3:47470785-47470804 Msa0295130:three_prime_UTR 35.0%
GGAGTGAAGAGAACTTTAAA+AGG + chr2_3:47470839-47470858 None:intergenic 35.0%
ACTCTTGCATTTGATATTGC+TGG - chr2_3:47470863-47470882 Msa0295130:three_prime_UTR 35.0%
!! GTTAGTTTCTCTTACCCTTT+TGG - chr2_3:47470950-47470969 Msa0295130:three_prime_UTR 35.0%
!!! AGGTTATGTTTTTGGGTTTG+TGG - chr2_3:47471084-47471103 Msa0295130:three_prime_UTR 35.0%
!!! GGTTATGTTTTTGGGTTTGT+GGG - chr2_3:47471085-47471104 Msa0295130:three_prime_UTR 35.0%
!! TCTTAGTTTCTGGGTTTTGA+AGG - chr2_3:47471150-47471169 Msa0295130:exon 35.0%
TAACATTTGCCCTTGTCATT+AGG - chr2_3:47471406-47471425 Msa0295130:intron 35.0%
AACATTTGCCCTTGTCATTA+GGG - chr2_3:47471407-47471426 Msa0295130:intron 35.0%
! GCATTGAAAAGAGCAACTTT+TGG - chr2_3:47471462-47471481 Msa0295130:intron 35.0%
TTGATGAACTCAAAGTGATG+GGG + chr2_3:47471545-47471564 None:intergenic 35.0%
TGCATTAAACTTAGGAAGGA+AGG - chr2_3:47471836-47471855 Msa0295130:intron 35.0%
GACACAATGTGTATAATCTC+TGG - chr2_3:47471925-47471944 Msa0295130:CDS 35.0%
!! GCGACTCTTAGATTTTTAGA+AGG - chr2_3:47472348-47472367 Msa0295130:CDS 35.0%
! CAGATGTACGTTTTCTTAAG+AGG + chr2_3:47472374-47472393 None:intergenic 35.0%
!! TTTGATGGTAATGGTATCTG+AGG + chr2_3:47472664-47472683 None:intergenic 35.0%
! CAAATTGGACAGTCTTTTGA+TGG + chr2_3:47472679-47472698 None:intergenic 35.0%
ACGGTATGAACTCAATACAA+TGG - chr2_3:47472706-47472725 Msa0295130:intron 35.0%
ACAATGGCTGTTAACATGAT+TGG - chr2_3:47472722-47472741 Msa0295130:intron 35.0%
CCATCTGCTGAAATCTTAAA+TGG + chr2_3:47472849-47472868 None:intergenic 35.0%
! CCATTTAAGATTTCAGCAGA+TGG - chr2_3:47472846-47472865 Msa0295130:intron 35.0%
TCGTAATGTCTTGGAAAAGA+TGG - chr2_3:47473035-47473054 Msa0295130:intron 35.0%
! TTAATTAAGTCAGTAGTGGG+AGG - chr2_3:47473302-47473321 Msa0295130:intron 35.0%
AAGAATAAATAGGGGAGAGA+AGG - chr2_3:47473334-47473353 Msa0295130:intron 35.0%
AGAATAAATAGGGGAGAGAA+GGG - chr2_3:47473335-47473354 Msa0295130:intron 35.0%
! ATCCCGATATTGCTGAATTT+TGG - chr2_3:47473708-47473727 Msa0295130:intron 35.0%
ACCTATCCACAGATTATGTA+TGG - chr2_3:47473737-47473756 Msa0295130:intron 35.0%
TCCATACATAATCTGTGGAT+AGG + chr2_3:47473741-47473760 None:intergenic 35.0%
!! GTATTGATTTGTCCCCTTAT+TGG - chr2_3:47473860-47473879 Msa0295130:intron 35.0%
AGCATATCAAACCCAATAAG+GGG + chr2_3:47473875-47473894 None:intergenic 35.0%
AAGAACAAAACTAATGGAGC+CGG - chr2_3:47474024-47474043 Msa0295130:intron 35.0%
ATTTCCTCAGCAAATTGCAA+AGG + chr2_3:47474181-47474200 None:intergenic 35.0%
GTGTAGCTTATATGCCAATA+AGG - chr2_3:47474283-47474302 Msa0295130:intron 35.0%
! TTTTTGCACAATGGTGTGTT+AGG - chr2_3:47474356-47474375 Msa0295130:intron 35.0%
!!! GTAGCTTTTTCAAGTTAACC+AGG - chr2_3:47474578-47474597 Msa0295130:intron 35.0%
! TTCGTATTTCTTTTGCGTGT+GGG - chr2_3:47474704-47474723 Msa0295130:CDS 35.0%
!! GGGATGTTTTTAACTATGAC+AGG + chr2_3:47475153-47475172 None:intergenic 35.0%
ATACATACACCCCAATTTGA+TGG + chr2_3:47475237-47475256 None:intergenic 35.0%
! TCTAAAGTGTGGACTAATGT+TGG + chr2_3:47475382-47475401 None:intergenic 35.0%
! AGCACTAAACATCTAAAGTG+TGG + chr2_3:47475393-47475412 None:intergenic 35.0%
!! ACCTTACAAGTCAGTTTTGT+GGG - chr2_3:47475481-47475500 Msa0295130:intron 35.0%
GTTTGACAAATTCACTGGAA+AGG + chr2_3:47475625-47475644 None:intergenic 35.0%
AAATGAAGTTAAACCACCCT+AGG + chr2_3:47475660-47475679 None:intergenic 35.0%
TTCGGATCACATAAATTTGG+TGG - chr2_3:47475788-47475807 Msa0295130:intron 35.0%
TCGGATCACATAAATTTGGT+GGG - chr2_3:47475789-47475808 Msa0295130:intron 35.0%
! CTTTGGGAGATGATGAAAAA+AGG - chr2_3:47475977-47475996 Msa0295130:intron 35.0%
! CCTTTTTGCATTGTTCTCTT+GGG - chr2_3:47476113-47476132 Msa0295130:CDS 35.0%
!! AGCATTTTTGGACACCTAAT+GGG + chr2_3:47476141-47476160 None:intergenic 35.0%
GAAGTTAACACAGAATGTAG+TGG + chr2_3:47476205-47476224 None:intergenic 35.0%
TAAACCTGCTACCTATTATG+AGG - chr2_3:47476226-47476245 Msa0295130:intron 35.0%
AATTCCTCATAATAGGTAGC+AGG + chr2_3:47476233-47476252 None:intergenic 35.0%
AAGAATTTAGCTAGAGAGGT+AGG - chr2_3:47476300-47476319 Msa0295130:intron 35.0%
GTCAAACATTGGATTGAGAT+GGG - chr2_3:47476374-47476393 Msa0295130:intron 35.0%
! TTATCACGTCTCTTTTGTCA+TGG - chr2_3:47476412-47476431 Msa0295130:intron 35.0%
! TATCACGTCTCTTTTGTCAT+GGG - chr2_3:47476413-47476432 Msa0295130:intron 35.0%
!! GAAAGGATTTTAAAGGGAGT+GGG - chr2_3:47476549-47476568 Msa0295130:intron 35.0%
ATAAGGGAAGAATAAAGGGA+AGG + chr2_3:47476762-47476781 None:intergenic 35.0%
CTCTGACATTATATCTTGAG+GGG - chr2_3:47476928-47476947 Msa0295130:intron 35.0%
TCTGACATTATATCTTGAGG+GGG - chr2_3:47476929-47476948 Msa0295130:intron 35.0%
TTCTCATCCATTCTAATGTC+AGG + chr2_3:47477076-47477095 None:intergenic 35.0%
! GATAGAGTTAGTTTGGACTT+TGG - chr2_3:47477126-47477145 Msa0295130:intron 35.0%
!!! GAATTGGTTTTACCAATGAC+CGG - chr2_3:47477187-47477206 Msa0295130:CDS 35.0%
!!! AATTGGTTTTACCAATGACC+GGG - chr2_3:47477188-47477207 Msa0295130:CDS 35.0%
GGGAAAATATGAAAGGATTG+AGG + chr2_3:47477259-47477278 None:intergenic 35.0%
ATGTACAGTGGGAAACTAAA+TGG - chr2_3:47477592-47477611 Msa0295130:intron 35.0%
AACTAAATGGCGTCAAGAAA+AGG - chr2_3:47477605-47477624 Msa0295130:intron 35.0%
TTTGTTTGCTTGTGCCAAAA+AGG - chr2_3:47477657-47477676 Msa0295130:intron 35.0%
AGTTGTAATGTACATGCTGT+TGG + chr2_3:47477743-47477762 None:intergenic 35.0%
TACCGATAGTTCAGAATCAT+AGG - chr2_3:47477785-47477804 Msa0295130:CDS 35.0%
ACCGATAGTTCAGAATCATA+GGG - chr2_3:47477786-47477805 Msa0295130:CDS 35.0%
ACCCTATGATTCTGAACTAT+CGG + chr2_3:47477790-47477809 None:intergenic 35.0%
AGAATCAGACACTAATTGAG+GGG + chr2_3:47477827-47477846 None:intergenic 35.0%
GAAGAATCAGACACTAATTG+AGG + chr2_3:47477829-47477848 None:intergenic 35.0%
! TGTGTGTGTGTGTTTTATCT+GGG - chr2_3:47478153-47478172 Msa0295130:intron 35.0%
GTGACTCACAACTTTCTATT+TGG - chr2_3:47478211-47478230 Msa0295130:intron 35.0%
CTCAATGAGTATATGTATGC+GGG - chr2_3:47478249-47478268 Msa0295130:intron 35.0%
CGGGAAGATTTATTTACTTG+TGG - chr2_3:47478268-47478287 Msa0295130:intron 35.0%
! TCCAAGTGTTTGACATTTTC+TGG - chr2_3:47478426-47478445 Msa0295130:intron 35.0%
! CCAAGTGTTTGACATTTTCT+GGG - chr2_3:47478427-47478446 Msa0295130:intron 35.0%
! CAAGTGTTTGACATTTTCTG+GGG - chr2_3:47478428-47478447 Msa0295130:intron 35.0%
GAAGCAGATACTGAAACTTA+AGG - chr2_3:47478508-47478527 Msa0295130:intron 35.0%
GTCATCATCACTATGACTAA+TGG + chr2_3:47478623-47478642 None:intergenic 35.0%
! TTGACACGATGTGATGATTT+TGG - chr2_3:47478704-47478723 Msa0295130:intron 35.0%
AAATGATGAACATGACAGCT+AGG + chr2_3:47478801-47478820 None:intergenic 35.0%
!! CATGTTCATCATTTTTGTGG+AGG - chr2_3:47478807-47478826 Msa0295130:intron 35.0%
TTTGTGGAGGAAACTATTGT+TGG - chr2_3:47478820-47478839 Msa0295130:intron 35.0%
GAAAAGGAAAGGTTTCTGTT+AGG - chr2_3:47478865-47478884 Msa0295130:intron 35.0%
TGTAACATCAGCTTAGGTTT+GGG + chr2_3:47478933-47478952 None:intergenic 35.0%
GATAGAGTTGAAAGAGGGAA+GGG + chr2_3:47470646-47470665 None:intergenic 40.0%
AGATAGAGTTGAAAGAGGGA+AGG + chr2_3:47470647-47470666 None:intergenic 40.0%
GAGAGTGAGAGTGAATGAAA+GGG + chr2_3:47470686-47470705 None:intergenic 40.0%
TGAGAGTGAGAGTGAATGAA+AGG + chr2_3:47470687-47470706 None:intergenic 40.0%
ATACTTCAGAGATCGCTACA+AGG - chr2_3:47470766-47470785 Msa0295130:three_prime_UTR 40.0%
!! TTTGGGTTTGTGGGTTTTTG+TGG - chr2_3:47471094-47471113 Msa0295130:three_prime_UTR 40.0%
ATTGTATGCAAGCATCACCA+TGG - chr2_3:47471720-47471739 Msa0295130:intron 40.0%
GAAGGAAGGTGATATGTCAA+AGG - chr2_3:47471850-47471869 Msa0295130:intron 40.0%
!! GATTGTTGTTTCCTCACTTG+AGG - chr2_3:47471903-47471922 Msa0295130:CDS 40.0%
! GCAGTATTGTTTGTTGCCTT+TGG - chr2_3:47471953-47471972 Msa0295130:CDS 40.0%
GGCAATTCTTCACTTGATAG+TGG + chr2_3:47472083-47472102 None:intergenic 40.0%
! TGAAGAATTGCCACTTGAAG+AGG - chr2_3:47472091-47472110 Msa0295130:intron 40.0%
GCTACAAGGAATCAAAATGG+AGG + chr2_3:47472455-47472474 None:intergenic 40.0%
! TTTTAGTGGAGAGAAAGCGA+CGG - chr2_3:47472567-47472586 Msa0295130:intron 40.0%
GCATATACCATCATCCTCTT+TGG - chr2_3:47472636-47472655 Msa0295130:intron 40.0%
!! GGACAGTCTTTTGATGGTAA+TGG + chr2_3:47472673-47472692 None:intergenic 40.0%
AAAGACTGTCCAATTTGCGA+TGG - chr2_3:47472682-47472701 Msa0295130:intron 40.0%
ACCACAAATCACAACAGCAT+TGG + chr2_3:47472765-47472784 None:intergenic 40.0%
GATATTGCACAGGGTGTAAT+GGG - chr2_3:47472798-47472817 Msa0295130:intron 40.0%
! AAAGAAAGGGCACGTAAAAG+TGG + chr2_3:47472985-47473004 None:intergenic 40.0%
TTAAGATTATGGAGCCCCAT+TGG - chr2_3:47473007-47473026 Msa0295130:intron 40.0%
AAATGACGACTGACCTCATA+TGG + chr2_3:47473066-47473085 None:intergenic 40.0%
GCAATTGGTCGGATAGAATT+AGG + chr2_3:47473100-47473119 None:intergenic 40.0%
CTGATGGTAATAGTACAGAG+AGG + chr2_3:47473510-47473529 None:intergenic 40.0%
!! AAGAGAAGCATTCACTCTGA+TGG + chr2_3:47473526-47473545 None:intergenic 40.0%
! AGTTAAGCAGGAGTATGACA+AGG - chr2_3:47473574-47473593 Msa0295130:intron 40.0%
! GTTAAGCAGGAGTATGACAA+GGG - chr2_3:47473575-47473594 Msa0295130:intron 40.0%
! TTAAGCAGGAGTATGACAAG+GGG - chr2_3:47473576-47473595 Msa0295130:intron 40.0%
!! CTAGCATTGACAAGTCCAAA+AGG + chr2_3:47473942-47473961 None:intergenic 40.0%
! GCTAGTACTGAACTACTTAG+AGG - chr2_3:47473957-47473976 Msa0295130:intron 40.0%
AACAATAACACGGTTGTGCT+CGG - chr2_3:47474079-47474098 Msa0295130:intron 40.0%
!! TCTTCCTTTGCAATTTGCTG+AGG - chr2_3:47474174-47474193 Msa0295130:intron 40.0%
! GGATTTTATATTGGTGGGGA+AGG - chr2_3:47474442-47474461 Msa0295130:intron 40.0%
TGAAAAAGCTACTGTATGGG+AGG + chr2_3:47474570-47474589 None:intergenic 40.0%
! CTTCGTATTTCTTTTGCGTG+TGG - chr2_3:47474703-47474722 Msa0295130:CDS 40.0%
! TTTCTTTTGCGTGTGGGTTT+AGG - chr2_3:47474710-47474729 Msa0295130:CDS 40.0%
! TTGTTGCTTGTATTCATGGC+TGG - chr2_3:47474829-47474848 Msa0295130:intron 40.0%
!! CCTTCTTAGCCTTGTAGTAA+GGG + chr2_3:47475173-47475192 None:intergenic 40.0%
TCCACCAAGACCATCAAATT+GGG - chr2_3:47475224-47475243 Msa0295130:intron 40.0%
! AAAGTGTGGACTAATGTTGG+TGG + chr2_3:47475379-47475398 None:intergenic 40.0%
!! CAAAACTGACTTGTAAGGTG+AGG + chr2_3:47475480-47475499 None:intergenic 40.0%
! CACCTTACAAGTCAGTTTTG+TGG - chr2_3:47475480-47475499 Msa0295130:intron 40.0%
!! TCCCACAAAACTGACTTGTA+AGG + chr2_3:47475485-47475504 None:intergenic 40.0%
TAGTCTAGTCCAGACAACTA+TGG + chr2_3:47475543-47475562 None:intergenic 40.0%
TCTGGGTTTGACAAATTCAC+TGG + chr2_3:47475630-47475649 None:intergenic 40.0%
AAACCCAGATGAAACACCTA+GGG - chr2_3:47475641-47475660 Msa0295130:intron 40.0%
CTCAATGCACTTCTTCCTAT+TGG - chr2_3:47475716-47475735 Msa0295130:intron 40.0%
TTCAACACACTTCCTCCTAT+TGG + chr2_3:47475832-47475851 None:intergenic 40.0%
! GCCTTTTTGCATTGTTCTCT+TGG - chr2_3:47476112-47476131 Msa0295130:CDS 40.0%
CCCAAGAGAACAATGCAAAA+AGG + chr2_3:47476116-47476135 None:intergenic 40.0%
!! GCATTTTTGGACACCTAATG+GGG + chr2_3:47476140-47476159 None:intergenic 40.0%
!! CAGCATTTTTGGACACCTAA+TGG + chr2_3:47476142-47476161 None:intergenic 40.0%
CATTAGGTGTCCAAAAATGC+TGG - chr2_3:47476140-47476159 Msa0295130:CDS 40.0%
! GGTTGGGTTAGAAACTAGAT+AGG + chr2_3:47476267-47476286 None:intergenic 40.0%
ACTCGTCATTCGTCAAACAT+TGG - chr2_3:47476363-47476382 Msa0295130:intron 40.0%
CGTCAAACATTGGATTGAGA+TGG - chr2_3:47476373-47476392 Msa0295130:intron 40.0%
!! GCTTTGTTTGGGAGTTAAGA+GGG - chr2_3:47476455-47476474 Msa0295130:intron 40.0%
TTTGGGAGTTAAGAGGGAAA+TGG - chr2_3:47476461-47476480 Msa0295130:intron 40.0%
!! GGAAAGGATTTTAAAGGGAG+TGG - chr2_3:47476548-47476567 Msa0295130:intron 40.0%
GGGAACGGAAAAAATGCATT+GGG + chr2_3:47476674-47476693 None:intergenic 40.0%
!!! CATTTTTTCCGTTCCCCTAT+TGG - chr2_3:47476678-47476697 Msa0295130:intron 40.0%
TGGACTAAAACCCTCCAATA+GGG + chr2_3:47476695-47476714 None:intergenic 40.0%
TTGGACTAAAACCCTCCAAT+AGG + chr2_3:47476696-47476715 None:intergenic 40.0%
!! GCTTTGTTTGGGAGTTTGAA+GGG + chr2_3:47476808-47476827 None:intergenic 40.0%
!!! TGTCAGGTGTTTTAACTAGC+AGG + chr2_3:47477060-47477079 None:intergenic 40.0%
ACTAACCACAGAGAATTGAC+AGG - chr2_3:47477449-47477468 Msa0295130:intron 40.0%
!! AAGATGATGGACTCAATGGA+AGG + chr2_3:47477482-47477501 None:intergenic 40.0%
TTCCATTGAGTCCATCATCT+TGG - chr2_3:47477481-47477500 Msa0295130:intron 40.0%
TCCATTGAGTCCATCATCTT+GGG - chr2_3:47477482-47477501 Msa0295130:intron 40.0%
AAATGGCGTCAAGAAAAGGT+TGG - chr2_3:47477609-47477628 Msa0295130:intron 40.0%
ACAAGCAAACAAACAGGAGA+TGG + chr2_3:47477650-47477669 None:intergenic 40.0%
TTTGGCACAAGCAAACAAAC+AGG + chr2_3:47477656-47477675 None:intergenic 40.0%
! TCAGAATCATAGGGTGTTCT+TGG - chr2_3:47477795-47477814 Msa0295130:CDS 40.0%
! GTGTGTGTGTGTGTTTTATC+TGG - chr2_3:47478152-47478171 Msa0295130:intron 40.0%
CCCAGAAAATGTCAAACACT+TGG + chr2_3:47478430-47478449 None:intergenic 40.0%
TCACTATGACTAATGGGAGA+AGG + chr2_3:47478616-47478635 None:intergenic 40.0%
TCTTGCAGAAACATCGACAA+CGG - chr2_3:47478667-47478686 Msa0295130:intron 40.0%
TTAGGGATACAAGCATGTTC+TGG + chr2_3:47478733-47478752 None:intergenic 40.0%
GTGTAACATCAGCTTAGGTT+TGG + chr2_3:47478934-47478953 None:intergenic 40.0%
GATAAAACGGAAAAACACCC+TGG + chr2_3:47478992-47479011 None:intergenic 40.0%
CACACATACACAAACCATTC+TGG + chr2_3:47479105-47479124 None:intergenic 40.0%
TGAGAGTGAATGAAAGGGAG+TGG + chr2_3:47470681-47470700 None:intergenic 45.0%
GTTAGTGTCATGTCTCGTGT+AGG + chr2_3:47471246-47471265 None:intergenic 45.0%
!! TTGAAGTGTCGGTGCTACAT+AGG - chr2_3:47471362-47471381 Msa0295130:intron 45.0%
GACATGTGCCCTAATGACAA+GGG + chr2_3:47471418-47471437 None:intergenic 45.0%
TGACATGTGCCCTAATGACA+AGG + chr2_3:47471419-47471438 None:intergenic 45.0%
TGTCATTAGGGCACATGTCA+AGG - chr2_3:47471419-47471438 Msa0295130:intron 45.0%
TTGCTGCATGGCTTGATTGT+AGG - chr2_3:47471785-47471804 Msa0295130:intron 45.0%
! ATTGTAGGCGGTTGCTACTT+TGG - chr2_3:47471800-47471819 Msa0295130:intron 45.0%
!! TTGTAGGCGGTTGCTACTTT+GGG - chr2_3:47471801-47471820 Msa0295130:intron 45.0%
ACACATTGTGTCCTCAAGTG+AGG + chr2_3:47471917-47471936 None:intergenic 45.0%
! ACTGTGCAACATGTAGTGGA+TGG - chr2_3:47472016-47472035 Msa0295130:intron 45.0%
! AGAGTACTCACCTCTTCAAG+TGG + chr2_3:47472104-47472123 None:intergenic 45.0%
CGCTTTCTCTCCACTAAAAG+TGG + chr2_3:47472566-47472585 None:intergenic 45.0%
CAGATGCCATTGTCAACAAC+CGG - chr2_3:47472602-47472621 Msa0295130:intron 45.0%
AGATGCCATTGTCAACAACC+GGG - chr2_3:47472603-47472622 Msa0295130:intron 45.0%
GTATATGCACTAACTCAGCC+CGG + chr2_3:47472624-47472643 None:intergenic 45.0%
TGAGGATCCAAAGAGGATGA+TGG + chr2_3:47472646-47472665 None:intergenic 45.0%
TGGTATCTGAGGATCCAAAG+AGG + chr2_3:47472653-47472672 None:intergenic 45.0%
CTGTCCAATTTGCGATGGAA+CGG - chr2_3:47472687-47472706 Msa0295130:intron 45.0%
CATACCGTTCCATCGCAAAT+TGG + chr2_3:47472694-47472713 None:intergenic 45.0%
GCCAATGCTGTTGTGATTTG+TGG - chr2_3:47472761-47472780 Msa0295130:intron 45.0%
CGATATTGCACAGGGTGTAA+TGG - chr2_3:47472797-47472816 Msa0295130:intron 45.0%
ACATTACGAGCTTGCCAATG+GGG + chr2_3:47473024-47473043 None:intergenic 45.0%
GACATTACGAGCTTGCCAAT+GGG + chr2_3:47473025-47473044 None:intergenic 45.0%
AGACATTACGAGCTTGCCAA+TGG + chr2_3:47473026-47473045 None:intergenic 45.0%
TTGGCAAGCTCGTAATGTCT+TGG - chr2_3:47473026-47473045 Msa0295130:intron 45.0%
ATCTGAGGATTTGACTGGGA+AGG - chr2_3:47473371-47473390 Msa0295130:intron 45.0%
TCTGAGGATTTGACTGGGAA+GGG - chr2_3:47473372-47473391 Msa0295130:intron 45.0%
!! AAGGGGCCATTTTGGCATTA+GGG - chr2_3:47473390-47473409 Msa0295130:intron 45.0%
!! GAGCAAAGAGGGCATTCAAA+CGG + chr2_3:47473907-47473926 None:intergenic 45.0%
!! ATCCTTTGAAGTCAGTAGGC+CGG + chr2_3:47474046-47474065 None:intergenic 45.0%
TGCTCGGTAGTGATGAAGAT+GGG - chr2_3:47474095-47474114 Msa0295130:intron 45.0%
ACAATGGTGTGTTAGGCGTA+TGG - chr2_3:47474363-47474382 Msa0295130:intron 45.0%
TATAGATCCTGACCGTGCAA+AGG - chr2_3:47475122-47475141 Msa0295130:CDS 45.0%
TGACAGGATCATCCTTTGCA+CGG + chr2_3:47475137-47475156 None:intergenic 45.0%
CCCTTACTACAAGGCTAAGA+AGG - chr2_3:47475170-47475189 Msa0295130:intron 45.0%
!! GCCTTCTTAGCCTTGTAGTA+AGG + chr2_3:47475174-47475193 None:intergenic 45.0%
!! TAAGAAGGCACTGGAGAAAG+AGG - chr2_3:47475185-47475204 Msa0295130:intron 45.0%
! CAATTTGATGGTCTTGGTGG+AGG + chr2_3:47475225-47475244 None:intergenic 45.0%
CTCCACCAAGACCATCAAAT+TGG - chr2_3:47475223-47475242 Msa0295130:intron 45.0%
CCACCAAGACCATCAAATTG+GGG - chr2_3:47475225-47475244 Msa0295130:intron 45.0%
! ACACCCCAATTTGATGGTCT+TGG + chr2_3:47475231-47475250 None:intergenic 45.0%
! CTGACTTGTAAGGTGAGGAA+TGG + chr2_3:47475475-47475494 None:intergenic 45.0%
! TTGTCTGGACTAGACTACTG+TGG - chr2_3:47475546-47475565 Msa0295130:intron 45.0%
TCGCAGGTTACAAGTCAAAC+TGG + chr2_3:47475572-47475591 None:intergenic 45.0%
CAAACCCAGATGAAACACCT+AGG - chr2_3:47475640-47475659 Msa0295130:intron 45.0%
AGTTTCCTGCGAAAGCTCTA+CGG - chr2_3:47476061-47476080 Msa0295130:intron 45.0%
TTAAACCGTAGAGCTTTCGC+AGG + chr2_3:47476069-47476088 None:intergenic 45.0%
GGGACAAATAACAAACCCTC+AGG - chr2_3:47476433-47476452 Msa0295130:intron 45.0%
!! ACAAACCCTCAGGCTTTGTT+TGG - chr2_3:47476443-47476462 Msa0295130:intron 45.0%
!! CAAACCCTCAGGCTTTGTTT+GGG - chr2_3:47476444-47476463 Msa0295130:intron 45.0%
AACTCCCAAACAAAGCCTGA+GGG + chr2_3:47476451-47476470 None:intergenic 45.0%
TAACTCCCAAACAAAGCCTG+AGG + chr2_3:47476452-47476471 None:intergenic 45.0%
!! GGCTTTGTTTGGGAGTTAAG+AGG - chr2_3:47476454-47476473 Msa0295130:intron 45.0%
GGAGTTAAGAGGGAAATGGA+GGG - chr2_3:47476465-47476484 Msa0295130:intron 45.0%
GAGTTAAGAGGGAAATGGAG+GGG - chr2_3:47476466-47476485 Msa0295130:intron 45.0%
AAATGCATTGGGAGAGAGCT+TGG + chr2_3:47476663-47476682 None:intergenic 45.0%
GGGGAACGGAAAAAATGCAT+TGG + chr2_3:47476675-47476694 None:intergenic 45.0%
! TTTTTCCGTTCCCCTATTGG+AGG - chr2_3:47476681-47476700 Msa0295130:intron 45.0%
! TTTTCCGTTCCCCTATTGGA+GGG - chr2_3:47476682-47476701 Msa0295130:intron 45.0%
AAAACCCTCCAATAGGGGAA+CGG + chr2_3:47476689-47476708 None:intergenic 45.0%
GGACTAAAACCCTCCAATAG+GGG + chr2_3:47476694-47476713 None:intergenic 45.0%
GGGGAGGGATTTAACGATAA+GGG + chr2_3:47476778-47476797 None:intergenic 45.0%
AGGGGAGGGATTTAACGATA+AGG + chr2_3:47476779-47476798 None:intergenic 45.0%
GAGTTTGAAGGGAAAGGAAG+GGG + chr2_3:47476797-47476816 None:intergenic 45.0%
GGAGTTTGAAGGGAAAGGAA+GGG + chr2_3:47476798-47476817 None:intergenic 45.0%
GTTTGGGAGTTTGAAGGGAA+AGG + chr2_3:47476803-47476822 None:intergenic 45.0%
!! GGCTTTGTTTGGGAGTTTGA+AGG + chr2_3:47476809-47476828 None:intergenic 45.0%
! ATTGGCTCATGGATGCTTTG+TGG - chr2_3:47476894-47476913 Msa0295130:intron 45.0%
CAGTTCCTGTCAATTCTCTG+TGG + chr2_3:47477457-47477476 None:intergenic 45.0%
CACAGAGAATTGACAGGAAC+TGG - chr2_3:47477455-47477474 Msa0295130:intron 45.0%
!! TCCCAAGATGATGGACTCAA+TGG + chr2_3:47477486-47477505 None:intergenic 45.0%
TCCATCATCTTGGGATGAAG+AGG - chr2_3:47477491-47477510 Msa0295130:intron 45.0%
TCCTCTTCATCCCAAGATGA+TGG + chr2_3:47477495-47477514 None:intergenic 45.0%
TCATTGCATGAAGCGTGACT+AGG + chr2_3:47477709-47477728 None:intergenic 45.0%
! GAACTATCGGTAAGAGCACA+AGG + chr2_3:47477777-47477796 None:intergenic 45.0%
CCAGCATCTCATTCACCTTA+AGG + chr2_3:47477897-47477916 None:intergenic 45.0%
CCTTAAGGTGAATGAGATGC+TGG - chr2_3:47477894-47477913 Msa0295130:intron 45.0%
TAAGGTGAATGAGATGCTGG+AGG - chr2_3:47477897-47477916 Msa0295130:intron 45.0%
AACACACACACACACAGAGA+GGG + chr2_3:47478147-47478166 None:intergenic 45.0%
AAACACACACACACACAGAG+AGG + chr2_3:47478148-47478167 None:intergenic 45.0%
GGCAAGTGTAACATCAGCTT+AGG + chr2_3:47478939-47478958 None:intergenic 45.0%
GAGAGCTTAGAAACCAGCTC+AGG + chr2_3:47470914-47470933 None:intergenic 50.0%
CTGCATGGCTTGATTGTAGG+CGG - chr2_3:47471788-47471807 Msa0295130:intron 50.0%
!! TGTAGGCGGTTGCTACTTTG+GGG - chr2_3:47471802-47471821 Msa0295130:intron 50.0%
AGGGACTGTGCAACATGTAG+TGG - chr2_3:47472012-47472031 Msa0295130:intron 50.0%
!! TGCAACATGTAGTGGATGGC+AGG - chr2_3:47472020-47472039 Msa0295130:intron 50.0%
TGTACCATGTGTCGAGGAAG+TGG - chr2_3:47472051-47472070 Msa0295130:intron 50.0%
TGTTCCACTTCCTCGACACA+TGG + chr2_3:47472058-47472077 None:intergenic 50.0%
GGGAGAGAAGGGAAGATTGA+GGG - chr2_3:47473346-47473365 Msa0295130:intron 50.0%
GGAGAGAAGGGAAGATTGAG+GGG - chr2_3:47473347-47473366 Msa0295130:intron 50.0%
GGGCATCTGAGGATTTGACT+GGG - chr2_3:47473367-47473386 Msa0295130:intron 50.0%
CTGAGGATTTGACTGGGAAG+GGG - chr2_3:47473373-47473392 Msa0295130:intron 50.0%
!! GAAGGGGCCATTTTGGCATT+AGG - chr2_3:47473389-47473408 Msa0295130:intron 50.0%
GCACCTCCCTAATGCCAAAA+TGG + chr2_3:47473399-47473418 None:intergenic 50.0%
CTTCTTTGCATTGTCGCCGT+AGG + chr2_3:47473768-47473787 None:intergenic 50.0%
GTGCTCGGTAGTGATGAAGA+TGG - chr2_3:47474094-47474113 Msa0295130:intron 50.0%
GGGCTTGAGTAACCCTTGAA+TGG - chr2_3:47474421-47474440 Msa0295130:intron 50.0%
TAGTTAGGCTGCATGATGCC+TGG + chr2_3:47474599-47474618 None:intergenic 50.0%
TGTGGGTTTAGGAATCCAGG+TGG - chr2_3:47474721-47474740 Msa0295130:CDS 50.0%
GTGGGTTTAGGAATCCAGGT+GGG - chr2_3:47474722-47474741 Msa0295130:CDS 50.0%
ACCTGGCCACGAGAAAATCT+GGG - chr2_3:47474760-47474779 Msa0295130:intron 50.0%
! TTCATGGCTGGCTATGCTCT+TGG - chr2_3:47474841-47474860 Msa0295130:intron 50.0%
! CTACAAGGCTAAGAAGGCAC+TGG - chr2_3:47475176-47475195 Msa0295130:intron 50.0%
! CCCCAATTTGATGGTCTTGG+TGG + chr2_3:47475228-47475247 None:intergenic 50.0%
CTTGTAACCTGCGAGTAAGC+TGG - chr2_3:47475578-47475597 Msa0295130:intron 50.0%
GTTTAGACCAGCTTACTCGC+AGG + chr2_3:47475588-47475607 None:intergenic 50.0%
CCACCCTAGGTGTTTCATCT+GGG + chr2_3:47475647-47475666 None:intergenic 50.0%
ACCACCCTAGGTGTTTCATC+TGG + chr2_3:47475648-47475667 None:intergenic 50.0%
TGTTCTCTTGGGACCCCATT+AGG - chr2_3:47476124-47476143 Msa0295130:CDS 50.0%
GGGAGTTAAGAGGGAAATGG+AGG - chr2_3:47476464-47476483 Msa0295130:intron 50.0%
TTAAGAGGGAAATGGAGGGG+AGG - chr2_3:47476469-47476488 Msa0295130:intron 50.0%
TAAGAGGGAAATGGAGGGGA+GGG - chr2_3:47476470-47476489 Msa0295130:intron 50.0%
TTGAAGGGAAAGGAAGGGGA+GGG + chr2_3:47476793-47476812 None:intergenic 50.0%
TTTGAAGGGAAAGGAAGGGG+AGG + chr2_3:47476794-47476813 None:intergenic 50.0%
GGGAGTTTGAAGGGAAAGGA+AGG + chr2_3:47476799-47476818 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + chr2_3:47478011-47478030 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr2_3:47478010-47478029 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+GGG + chr2_3:47478010-47478029 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG + chr2_3:47478011-47478030 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr2_3:47478010-47478029 None:intergenic 50.0%
!!! GACATTTTCTGGGGTCACTG+TGG - chr2_3:47478437-47478456 Msa0295130:intron 50.0%
TGCAGAAACATCGACAACGG+AGG - chr2_3:47478670-47478689 Msa0295130:intron 50.0%
AGAAACATCGACAACGGAGG+TGG - chr2_3:47478673-47478692 Msa0295130:intron 50.0%
TTAGGTTTGGGTGTGCATGC+AGG + chr2_3:47478921-47478940 None:intergenic 50.0%
CCTAAACGACCTCGCGGTTT+CGG - chr2_3:47470728-47470747 Msa0295130:three_prime_UTR 55.0%
ACGAAATTGCCGAAACCGCG+AGG + chr2_3:47470740-47470759 None:intergenic 55.0%
!! ATTGCTGGTTCTGCTCCTCG+TGG - chr2_3:47470878-47470897 Msa0295130:three_prime_UTR 55.0%
TCAGGAACACCAAAGCCACG+AGG + chr2_3:47470896-47470915 None:intergenic 55.0%
!! TGGCTTTGGTGTTCCTGAGC+TGG - chr2_3:47470898-47470917 Msa0295130:three_prime_UTR 55.0%
TCGACACATGGTACACCGCA+TGG + chr2_3:47472046-47472065 None:intergenic 55.0%
ATGCGGTGTACCATGTGTCG+AGG - chr2_3:47472045-47472064 Msa0295130:intron 55.0%
CTCAGCCCGGTTGTTGACAA+TGG + chr2_3:47472611-47472630 None:intergenic 55.0%
GGGGAGAGAAGGGAAGATTG+AGG - chr2_3:47473345-47473364 Msa0295130:intron 55.0%
!! GGAAGATTGAGGGGCATCTG+AGG - chr2_3:47473356-47473375 Msa0295130:intron 55.0%
! GGGGCATCTGAGGATTTGAC+TGG - chr2_3:47473366-47473385 Msa0295130:intron 55.0%
! TGACTGGGAAGGGGCCATTT+TGG - chr2_3:47473382-47473401 Msa0295130:intron 55.0%
!! GGGCCATTTTGGCATTAGGG+AGG - chr2_3:47473393-47473412 Msa0295130:intron 55.0%
!! AGCCGGCCTACTGACTTCAA+AGG - chr2_3:47474041-47474060 Msa0295130:intron 55.0%
GCGTGTGGGTTTAGGAATCC+AGG - chr2_3:47474718-47474737 Msa0295130:CDS 55.0%
! ATCTCGAAGTTGGTCCCACC+TGG + chr2_3:47474739-47474758 None:intergenic 55.0%
GGACCAACTTCGAGATGACC+TGG - chr2_3:47474743-47474762 Msa0295130:CDS 55.0%
TGGCCAGGTCATCTCGAAGT+TGG + chr2_3:47474749-47474768 None:intergenic 55.0%
GACCTGGCCACGAGAAAATC+TGG - chr2_3:47474759-47474778 Msa0295130:intron 55.0%
! ACCCAGATTTTCTCGTGGCC+AGG + chr2_3:47474764-47474783 None:intergenic 55.0%
TGGCCACGAGAAAATCTGGG+TGG - chr2_3:47474763-47474782 Msa0295130:intron 55.0%
GGCCACGAGAAAATCTGGGT+GGG - chr2_3:47474764-47474783 Msa0295130:intron 55.0%
! CTCCCACCCAGATTTTCTCG+TGG + chr2_3:47474769-47474788 None:intergenic 55.0%
GGATCATCCTTTGCACGGTC+AGG + chr2_3:47475132-47475151 None:intergenic 55.0%
CCCAGATGAAACACCTAGGG+TGG - chr2_3:47475644-47475663 Msa0295130:intron 55.0%
TGCATTGGGAGAGAGCTTGG+AGG + chr2_3:47476660-47476679 None:intergenic 55.0%
GCATGAAGCGTGACTAGGAC+AGG + chr2_3:47477704-47477723 None:intergenic 55.0%
AGAGAGAGAGAGAGAGAGGG+TGG + chr2_3:47478008-47478027 None:intergenic 55.0%
AGAGAGAGAGAGAGAGAGGG+GGG + chr2_3:47478008-47478027 None:intergenic 55.0%
GAGAGAGAGAGAGAGAGAGG+GGG + chr2_3:47478009-47478028 None:intergenic 55.0%
ACACACACAGAGAGGGAGAG+GGG + chr2_3:47478140-47478159 None:intergenic 55.0%
CACACACACAGAGAGGGAGA+GGG + chr2_3:47478141-47478160 None:intergenic 55.0%
ACACACACACAGAGAGGGAG+AGG + chr2_3:47478142-47478161 None:intergenic 55.0%
TCGTTTAGGCATGGCGTGGC+GGG + chr2_3:47470717-47470736 None:intergenic 60.0%
GTCGTTTAGGCATGGCGTGG+CGG + chr2_3:47470718-47470737 None:intergenic 60.0%
GAGGTCGTTTAGGCATGGCG+TGG + chr2_3:47470721-47470740 None:intergenic 60.0%
GCCATGCCTAAACGACCTCG+CGG - chr2_3:47470722-47470741 Msa0295130:three_prime_UTR 60.0%
ACCGCGAGGTCGTTTAGGCA+TGG + chr2_3:47470726-47470745 None:intergenic 60.0%
CCGAAACCGCGAGGTCGTTT+AGG + chr2_3:47470731-47470750 None:intergenic 60.0%
GGTTCTGCTCCTCGTGGCTT+TGG - chr2_3:47470884-47470903 Msa0295130:three_prime_UTR 60.0%
!! GTAGTGGATGGCAGGCCATG+CGG - chr2_3:47472028-47472047 Msa0295130:intron 60.0%
GCTGGCTATGCTCTTGGCTG+TGG - chr2_3:47474847-47474866 Msa0295130:intron 60.0%
GGAAATGGAGGGGAGGGCTT+TGG - chr2_3:47476476-47476495 Msa0295130:intron 60.0%
! AATGGAGGGGAGGGCTTTGG+AGG - chr2_3:47476479-47476498 Msa0295130:intron 60.0%
!! ATGGAGGGGAGGGCTTTGGA+GGG - chr2_3:47476480-47476499 Msa0295130:intron 60.0%
! CTTTGGAGGGAAGGGGAGGA+AGG - chr2_3:47476493-47476512 Msa0295130:intron 60.0%
AGAGAGAGAGAGAGAGGGGG+GGG + chr2_3:47478071-47478090 None:intergenic 60.0%
GAGAGAGAGAGAGAGAGGGG+GGG + chr2_3:47478072-47478091 None:intergenic 60.0%
ACACACAGAGAGGGAGAGGG+GGG + chr2_3:47478138-47478157 None:intergenic 60.0%
CACACACAGAGAGGGAGAGG+GGG + chr2_3:47478139-47478158 None:intergenic 60.0%
!! AGGGGAGGGCTTTGGAGGGA+AGG - chr2_3:47476484-47476503 Msa0295130:intron 65.0%
!! GGGGAGGGCTTTGGAGGGAA+GGG - chr2_3:47476485-47476504 Msa0295130:intron 65.0%
!! GGGAGGGCTTTGGAGGGAAG+GGG - chr2_3:47476486-47476505 Msa0295130:intron 65.0%
!! AGGGCTTTGGAGGGAAGGGG+AGG - chr2_3:47476489-47476508 Msa0295130:intron 65.0%
AGAGAGAGAGAGAGGGGGGG+GGG + chr2_3:47478069-47478088 None:intergenic 65.0%
GAGAGAGAGAGAGAGGGGGG+GGG + chr2_3:47478070-47478089 None:intergenic 65.0%
ACACAGAGAGGGAGAGGGGG+GGG + chr2_3:47478136-47478155 None:intergenic 65.0%
CACACAGAGAGGGAGAGGGG+GGG + chr2_3:47478137-47478156 None:intergenic 65.0%
AGAGAGAGAGAGGGGGGGGG+GGG + chr2_3:47478067-47478086 None:intergenic 70.0%
GAGAGAGAGAGAGGGGGGGG+GGG + chr2_3:47478068-47478087 None:intergenic 70.0%
AGAGGGAGAGGGGGGGGAGA+GGG + chr2_3:47478130-47478149 None:intergenic 70.0%
GGGGAGGGAGAGGGAGAGGG+GGG + chr2_3:47478037-47478056 None:intergenic 75.0%
GGGGGAGGGAGAGGGAGAGG+GGG + chr2_3:47478038-47478057 None:intergenic 75.0%
GGGGGGAGGGAGAGGGAGAG+GGG + chr2_3:47478039-47478058 None:intergenic 75.0%
GGGGGGGAGGGAGAGGGAGA+GGG + chr2_3:47478040-47478059 None:intergenic 75.0%
AGAGAGAGAGGGGGGGGGGG+GGG + chr2_3:47478065-47478084 None:intergenic 75.0%
GAGAGAGAGAGGGGGGGGGG+GGG + chr2_3:47478066-47478085 None:intergenic 75.0%
GAGAGGGAGAGGGGGGGGAG+AGG + chr2_3:47478131-47478150 None:intergenic 75.0%
! GGGGGGGGAGGGAGAGGGAG+AGG + chr2_3:47478041-47478060 None:intergenic 80.0%
! AGAGAGAGGGGGGGGGGGGG+GGG + chr2_3:47478063-47478082 None:intergenic 80.0%
! GAGAGAGAGGGGGGGGGGGG+GGG + chr2_3:47478064-47478083 None:intergenic 80.0%
! GGGGGGGGGGGGGAGGGAGA+GGG + chr2_3:47478046-47478065 None:intergenic 85.0%
! AGAGAGGGGGGGGGGGGGGG+GGG + chr2_3:47478061-47478080 None:intergenic 85.0%
! GAGAGAGGGGGGGGGGGGGG+GGG + chr2_3:47478062-47478081 None:intergenic 85.0%
! GGGGGGGGGGGGGGAGGGAG+AGG + chr2_3:47478047-47478066 None:intergenic 90.0%
! AGAGGGGGGGGGGGGGGGGG+GGG + chr2_3:47478059-47478078 None:intergenic 90.0%
! GAGAGGGGGGGGGGGGGGGG+GGG + chr2_3:47478060-47478079 None:intergenic 90.0%
! GGGGGGGGGGGGGGGGGGGA+GGG + chr2_3:47478052-47478071 None:intergenic 95.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:47478057-47478076 None:intergenic 95.0%
! GAGGGGGGGGGGGGGGGGGG+GGG + chr2_3:47478058-47478077 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 47470616 47479259 47470616 ID=Msa0295130;Name=Msa0295130
chr2_3 mRNA 47470616 47479259 47470616 ID=Msa0295130-mRNA-1;Parent=Msa0295130;Name=Msa0295130-mRNA-1;_AED=0.05;_eAED=0.05;_QI=109|1|1|1|0.81|0.83|12|552|421
chr2_3 exon 47470616 47471200 47470616 ID=Msa0295130-mRNA-1:exon:14839;Parent=Msa0295130-mRNA-1
chr2_3 exon 47471873 47471974 47471873 ID=Msa0295130-mRNA-1:exon:14838;Parent=Msa0295130-mRNA-1
chr2_3 exon 47472249 47472404 47472249 ID=Msa0295130-mRNA-1:exon:14837;Parent=Msa0295130-mRNA-1
chr2_3 exon 47474627 47474764 47474627 ID=Msa0295130-mRNA-1:exon:14836;Parent=Msa0295130-mRNA-1
chr2_3 exon 47475075 47475143 47475075 ID=Msa0295130-mRNA-1:exon:14835;Parent=Msa0295130-mRNA-1
chr2_3 exon 47476067 47476189 47476067 ID=Msa0295130-mRNA-1:exon:14834;Parent=Msa0295130-mRNA-1
chr2_3 exon 47476804 47476863 47476804 ID=Msa0295130-mRNA-1:exon:14833;Parent=Msa0295130-mRNA-1
chr2_3 exon 47477006 47477065 47477006 ID=Msa0295130-mRNA-1:exon:14832;Parent=Msa0295130-mRNA-1
chr2_3 exon 47477167 47477302 47477167 ID=Msa0295130-mRNA-1:exon:14831;Parent=Msa0295130-mRNA-1
chr2_3 exon 47477763 47477861 47477763 ID=Msa0295130-mRNA-1:exon:14830;Parent=Msa0295130-mRNA-1
chr2_3 exon 47478004 47478068 47478004 ID=Msa0295130-mRNA-1:exon:14829;Parent=Msa0295130-mRNA-1
chr2_3 exon 47478926 47479259 47478926 ID=Msa0295130-mRNA-1:exon:14828;Parent=Msa0295130-mRNA-1
chr2_3 five_prime_UTR 47479151 47479259 47479151 ID=Msa0295130-mRNA-1:five_prime_utr;Parent=Msa0295130-mRNA-1
chr2_3 CDS 47478926 47479150 47478926 ID=Msa0295130-mRNA-1:cds;Parent=Msa0295130-mRNA-1
chr2_3 CDS 47478004 47478068 47478004 ID=Msa0295130-mRNA-1:cds;Parent=Msa0295130-mRNA-1
chr2_3 CDS 47477763 47477861 47477763 ID=Msa0295130-mRNA-1:cds;Parent=Msa0295130-mRNA-1
chr2_3 CDS 47477167 47477302 47477167 ID=Msa0295130-mRNA-1:cds;Parent=Msa0295130-mRNA-1
chr2_3 CDS 47477006 47477065 47477006 ID=Msa0295130-mRNA-1:cds;Parent=Msa0295130-mRNA-1
chr2_3 CDS 47476804 47476863 47476804 ID=Msa0295130-mRNA-1:cds;Parent=Msa0295130-mRNA-1
chr2_3 CDS 47476067 47476189 47476067 ID=Msa0295130-mRNA-1:cds;Parent=Msa0295130-mRNA-1
chr2_3 CDS 47475075 47475143 47475075 ID=Msa0295130-mRNA-1:cds;Parent=Msa0295130-mRNA-1
chr2_3 CDS 47474627 47474764 47474627 ID=Msa0295130-mRNA-1:cds;Parent=Msa0295130-mRNA-1
chr2_3 CDS 47472249 47472404 47472249 ID=Msa0295130-mRNA-1:cds;Parent=Msa0295130-mRNA-1
chr2_3 CDS 47471873 47471974 47471873 ID=Msa0295130-mRNA-1:cds;Parent=Msa0295130-mRNA-1
chr2_3 CDS 47471168 47471200 47471168 ID=Msa0295130-mRNA-1:cds;Parent=Msa0295130-mRNA-1
chr2_3 three_prime_UTR 47470616 47471167 47470616 ID=Msa0295130-mRNA-1:three_prime_utr;Parent=Msa0295130-mRNA-1
Gene Sequence

>Msa0295130

ATGCCTAAACGACCTCGCGGTTTCGGCAATTTCGTCAAGAAATACTTCAGAGATCGCTACAAGGAATTCAACAACGCTTATGGCGAAACAGTTAGCGATGTCTTTGCTTTTCCTTTTAAAGTTCTCTTCACTCCTTTAACTCTTGCATTTGATATTGCTGGTTCTGCTCCTCGTGGCTTTGGTGTTCCTGAGCTGGTTTCTAAGCTCTCTGCTGCTTCTGTTTTTGCGGTTGCTACTTTGGGGACTTATGACATTGCATTAAACTTAGGAAGGAAGGTGATATGTCAAAGGGACTGTGCAACATGTAGTGGATGGCAGGCCATGCGGTGTACCATGTGTCGAGGAAGTGGAACAGTCCACTATCAAGTGAAGAATTGCCACTTGAAGAGTGGAGAGAAAGCGACGGTCGAATCTGTTGCAGATGCCATTGTCAACAACCGGGCTGAGTTAGTGCATATACCATCATCCTCTTTGGATCCTCAGATACCATTACCATCAAAAGACTGTCCAATTTGCGATGGAACGGGTGTAATGGGATGTCCTGAATGCAAAAACAAATTACCATTTAAGATTTCAGCAGATGGTATTATGGAGCCCCATTGGCAAGCTCGTAATGTCTTGGAAAAGATGGATTATCCATATGAGCACATAAGGGATAGCATGAAAGATCCCGATATTGCTGAATTTTGGTTGATTACCTATCCACAGATTATGTATGGATTTACCTACGGCGACAATGCAAAGAAGACAATATTGTCAGATTATGAGGAATCCAGGTGGGACCAACTTCGAGATGACCTGGCCACGAGAAAATCTGGGTGGGAGTTTCTGCATGATGTCTTGATATCTATAGATCCTGACCGTGCAAAGGATGATCCTGTCATAGTTAAAAACATCCCTTACTACAAGGCTAAGAAGGCACTGGAGAAAGAGGTTATGAAGCTTGATCCTCCACCAAGACCATCAAATTGGGGTGAACTGGACCTTCCATTGAGTCCATCATCTTGGGATGAAGAGGATCTCAAAAATCCAGAAAAACTCCATGAAATGAATGTTCTTCTCAATGCTCAAAGAGAAATCTCTGAAAATATATTGAATGTACAGTGGGAAACTAAATGGCGTCAAGAAAAGGTGAATGAGATGCTGGAGGAAAAGTTGCAGCCATACATTCAGAATATAGATAATGAAGTTCTTTCTGAACCTATTTTATTAAAATCACAAAAGCAAGAAAAGAAACATCGACAACGGAGGTGGTTCTTCTTTTGA

Protein sequence

>Msa0295130

MPKRPRGFGNFVKKYFRDRYKEFNNAYGETVSDVFAFPFKVLFTPLTLAFDIAGSAPRGFGVPELVSKLSAASVFAVATLGTYDIALNLGRKVICQRDCATCSGWQAMRCTMCRGSGTVHYQVKNCHLKSGEKATVESVADAIVNNRAELVHIPSSSLDPQIPLPSKDCPICDGTGVMGCPECKNKLPFKISADGIMEPHWQARNVLEKMDYPYEHIRDSMKDPDIAEFWLITYPQIMYGFTYGDNAKKTILSDYEESRWDQLRDDLATRKSGWEFLHDVLISIDPDRAKDDPVIVKNIPYYKAKKALEKEVMKLDPPPRPSNWGELDLPLSPSSWDEEDLKNPEKLHEMNVLLNAQREISENILNVQWETKWRQEKVNEMLEEKLQPYIQNIDNEVLSEPILLKSQKQEKKHRQRRWFFF*