AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0320090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0320090 MtrunA17_Chr2g0294911 95.717 607 24 2 1 606 1 606 0.0 1170
Msa0320090 MtrunA17_Chr4g0067981 62.225 683 172 13 1 601 2 680 0.0 767
Msa0320090 MtrunA17_Chr1g0161431 59.091 308 117 3 25 325 8 313 4.12e-115 356
Msa0320090 MtrunA17_Chr3g0137101 48.588 354 157 8 26 356 6 357 2.81e-101 321
Msa0320090 MtrunA17_Chr3g0123131 58.462 260 92 3 28 277 13 266 3.90e-95 303
Msa0320090 MtrunA17_Chr8g0376881 57.874 254 105 1 26 277 23 276 2.14e-92 295
Msa0320090 MtrunA17_Chr1g0149841 44.444 378 174 9 24 385 1 358 1.13e-91 291
Msa0320090 MtrunA17_Chr7g0275891 49.827 289 120 5 24 291 1 285 1.13e-84 268
Msa0320090 MtrunA17_Chr2g0304841 53.307 257 107 1 24 267 14 270 2.88e-83 275
Msa0320090 MtrunA17_Chr4g0074401 42.703 370 172 6 17 368 6 353 1.47e-81 268
Msa0320090 MtrunA17_Chr1g0149851 52.045 269 110 3 24 273 1 269 1.93e-79 261
Msa0320090 MtrunA17_Chr4g0074411 44.706 340 149 8 22 346 12 327 1.57e-77 257
Msa0320090 MtrunA17_Chr7g0275401 47.751 289 139 4 24 303 1 286 5.80e-75 241
Msa0320090 MtrunA17_Chr4g0074421 51.515 198 73 3 78 264 2 187 3.54e-59 196
Msa0320090 MtrunA17_Chr3g0134461 47.034 236 76 2 25 259 5 192 6.30e-59 195
Msa0320090 MtrunA17_Chr3g0134481 43.882 237 75 2 25 261 5 183 8.15e-57 189
Msa0320090 MtrunA17_Chr4g0009851 43.096 239 112 5 28 266 11 225 1.89e-56 193
Msa0320090 MtrunA17_Chr1g0149831 50.739 203 79 4 87 278 1 193 4.10e-56 189
Msa0320090 MtrunA17_Chr4g0009901 42.917 240 113 4 28 267 10 225 2.50e-55 189
Msa0320090 MtrunA17_Chr6g0471041 38.843 242 120 6 27 266 13 228 4.35e-45 165
Msa0320090 MtrunA17_Chr4g0009981 41.753 194 90 1 73 266 2 172 2.55e-44 158
Msa0320090 MtrunA17_Chr8g0391911 34.766 256 141 6 28 269 9 252 1.90e-35 134
Msa0320090 MtrunA17_Chr6g0473731 38.000 200 89 7 108 298 10 183 2.00e-29 121
Msa0320090 MtrunA17_Chr8g0383961 42.754 138 76 1 27 164 13 147 1.37e-28 115
Msa0320090 MtrunA17_Chr8g0350761 30.000 270 165 6 30 277 19 286 1.13e-27 116
Msa0320090 MtrunA17_Chr4g0011071 35.220 159 80 3 78 236 39 174 4.07e-27 108
Msa0320090 MtrunA17_Chr4g0031961 50.909 110 45 3 186 286 99 208 2.82e-24 103
Msa0320090 MtrunA17_Chr4g0009991 39.286 140 61 2 120 259 1 116 7.38e-23 94.4
Msa0320090 MtrunA17_Chr6g0456631 36.220 127 78 2 26 150 7 132 1.26e-21 92.4
Msa0320090 MtrunA17_Chr7g0276361 38.971 136 74 2 29 158 11 143 1.61e-21 99.0
Msa0320090 MtrunA17_Chr4g0030271 35.333 150 91 3 6 150 62 210 4.05e-21 98.2
Msa0320090 MtrunA17_Chr3g0127941 27.273 407 255 13 32 411 56 448 4.07e-21 97.8
Msa0320090 MtrunA17_Chr7g0255711 57.971 69 29 0 203 271 84 152 4.11e-21 94.4
Msa0320090 MtrunA17_Chr1g0181811 39.344 122 71 1 32 150 85 206 1.13e-20 96.7
Msa0320090 MtrunA17_Chr3g0091641 35.971 139 84 2 19 152 9 147 1.84e-20 95.5
Msa0320090 MtrunA17_Chr4g0061021 35.507 138 84 2 18 152 21 156 6.52e-19 90.5
Msa0320090 MtrunA17_Chr8g0345901 39.344 122 67 3 34 150 38 157 9.97e-19 90.1
Msa0320090 MtrunA17_Chr5g0400241 37.903 124 68 2 145 268 255 369 6.81e-17 84.0
Msa0320090 MtrunA17_Chr5g0400241 37.008 127 76 2 28 153 14 137 6.75e-14 74.7
Msa0320090 MtrunA17_Chr1g0198601 37.692 130 74 4 198 325 199 323 4.79e-16 80.5
Msa0320090 MtrunA17_Chr5g0423031 45.679 81 43 1 28 108 10 89 6.12e-16 76.3
Msa0320090 MtrunA17_Chr4g0010001 44.444 81 44 1 28 108 10 89 7.62e-16 73.2
Msa0320090 MtrunA17_Chr5g0417521 55.714 70 24 2 206 274 11 74 4.93e-15 77.0
Msa0320090 MtrunA17_Chr4g0054981 47.887 71 37 0 209 279 309 379 8.05e-15 77.8
Msa0320090 MtrunA17_Chr4g0054981 36.220 127 77 2 28 153 14 137 1.67e-13 73.6
Msa0320090 MtrunA17_Chr4g0040481 41.379 87 46 1 209 295 157 238 8.30e-15 77.0
Msa0320090 MtrunA17_Chr6g0469321 63.462 52 19 0 227 278 71 122 3.76e-14 70.9
Msa0320090 MtrunA17_Chr4g0042451 55.932 59 25 1 206 263 13 71 7.74e-14 73.2
Msa0320090 MtrunA17_Chr2g0324891 53.333 60 28 0 209 268 160 219 7.84e-14 73.9
Msa0320090 MtrunA17_Chr2g0321461 55.932 59 25 1 206 263 41 99 8.87e-14 73.6
Msa0320090 MtrunA17_Chr6g0461641 51.667 60 28 1 205 263 37 96 2.08e-13 72.4
Msa0320090 MtrunA17_Chr5g0422621 30.220 182 115 5 151 325 133 309 4.23e-13 71.2
Msa0320090 MtrunA17_Chr5g0402631 50.000 72 35 1 207 277 211 282 7.51e-13 70.1
Msa0320090 MtrunA17_Chr2g0310011 54.237 59 26 1 206 263 31 89 2.54e-12 68.6
Msa0320090 MtrunA17_Chr4g0045361 50.746 67 32 1 207 272 271 337 2.75e-12 68.9
Msa0320090 MtrunA17_Chr8g0356501 54.237 59 26 1 206 263 33 91 3.06e-12 68.6
Msa0320090 MtrunA17_Chr1g0197171 52.308 65 27 2 203 263 34 98 8.78e-12 66.2
Msa0320090 MtrunA17_Chr7g0274471 59.259 54 21 1 210 262 218 271 1.22e-11 67.0
Msa0320090 MtrunA17_Chr4g0062921 36.283 113 66 3 166 273 188 299 1.80e-11 66.6
Msa0320090 MtrunA17_Chr7g0261911 49.206 63 31 1 206 267 258 320 2.16e-11 66.6
Msa0320090 MtrunA17_Chr1g0190301 50.847 59 28 1 205 262 170 228 5.82e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0320090 AT3G16857.2 46.834 679 249 19 21 601 26 690 3.66e-175 513
Msa0320090 AT3G16857.1 46.341 656 241 18 21 578 26 668 7.27e-165 486
Msa0320090 AT3G16857.3 44.322 634 241 19 66 601 1 620 2.43e-144 432
Msa0320090 AT2G25180.1 59.924 262 93 3 26 281 11 266 9.92e-96 305
Msa0320090 AT2G01760.1 45.263 380 162 8 24 373 3 366 2.95e-95 297
Msa0320090 AT2G01760.2 42.157 408 162 9 24 373 3 394 5.67e-89 282
Msa0320090 AT4G31920.1 53.903 269 97 3 24 283 9 259 7.44e-87 281
Msa0320090 AT1G67710.1 49.702 336 128 9 29 333 8 333 1.16e-85 277
Msa0320090 AT5G58080.1 46.875 320 128 7 26 324 12 310 2.27e-78 261
Msa0320090 AT2G01760.3 42.271 317 137 9 87 373 1 301 1.05e-61 207
Msa0320090 AT1G67710.2 45.683 278 110 9 87 333 1 268 2.60e-56 197
Msa0320090 AT5G49240.1 42.915 247 134 3 18 259 28 272 9.23e-54 185
Msa0320090 AT1G49190.1 36.364 275 134 6 27 277 29 286 8.18e-46 167
Msa0320090 AT3G62670.1 39.407 236 128 5 33 262 42 268 1.92e-45 167
Msa0320090 AT1G67710.3 41.473 258 110 9 107 333 12 259 2.05e-40 153
Msa0320090 AT5G07210.2 33.955 268 145 6 32 269 16 281 7.50e-39 151
Msa0320090 AT5G07210.1 32.971 276 145 7 32 269 16 289 3.14e-36 144
Msa0320090 AT2G27070.1 32.103 271 147 7 32 268 16 283 3.79e-33 134
Msa0320090 AT1G49190.2 44.800 125 69 0 27 151 29 153 2.80e-29 123
Msa0320090 AT5G59570.2 52.083 96 43 1 194 286 125 220 3.99e-25 106
Msa0320090 AT5G59570.1 52.083 96 43 1 194 286 125 220 3.99e-25 106
Msa0320090 AT3G46640.2 51.064 94 45 1 194 286 128 221 1.85e-23 102
Msa0320090 AT3G46640.1 51.064 94 45 1 194 286 128 221 1.85e-23 102
Msa0320090 AT3G46640.3 51.064 94 45 1 194 286 128 221 2.77e-23 101
Msa0320090 AT2G46790.1 40.650 123 68 2 32 150 37 158 5.54e-23 102
Msa0320090 AT2G46790.3 40.650 123 68 2 32 150 37 158 5.84e-23 102
Msa0320090 AT5G24470.1 39.200 125 71 2 31 151 49 172 5.43e-21 97.4
Msa0320090 AT5G60100.7 39.837 123 69 2 32 150 64 185 6.81e-21 95.9
Msa0320090 AT5G60100.6 39.837 123 69 2 32 150 64 185 6.81e-21 95.9
Msa0320090 AT5G60100.4 39.837 123 69 2 32 150 64 185 6.81e-21 95.9
Msa0320090 AT2G40970.1 60.606 66 26 0 203 268 98 163 8.90e-21 92.4
Msa0320090 AT5G60100.5 39.837 123 69 2 32 150 64 185 9.89e-21 96.3
Msa0320090 AT5G60100.3 39.837 123 69 2 32 150 64 185 9.89e-21 96.3
Msa0320090 AT5G60100.1 39.837 123 69 2 32 150 64 185 9.89e-21 96.3
Msa0320090 AT5G60100.2 39.837 123 69 2 32 150 64 185 1.96e-20 95.5
Msa0320090 AT5G05090.1 59.091 66 27 0 203 268 74 139 2.74e-20 91.7
Msa0320090 AT3G10760.1 59.091 66 27 0 203 268 98 163 4.40e-20 92.4
Msa0320090 AT5G61380.1 38.710 124 73 1 32 152 19 142 4.53e-20 94.7
Msa0320090 AT5G02810.1 40.164 122 70 1 32 150 78 199 6.27e-20 94.7
Msa0320090 AT5G44190.2 50.649 77 38 0 203 279 140 216 8.01e-18 85.9
Msa0320090 AT5G44190.1 50.649 77 38 0 203 279 140 216 1.12e-17 85.9
Msa0320090 AT2G20570.1 39.823 113 63 2 170 277 108 220 4.58e-16 81.3
Msa0320090 AT2G20570.2 38.060 134 77 2 145 277 108 236 2.11e-14 76.3
Msa0320090 AT3G04030.1 51.282 78 30 3 206 282 41 111 3.62e-14 75.1
Msa0320090 AT3G04030.3 51.282 78 30 3 206 282 41 111 4.42e-14 74.7
Msa0320090 AT5G18240.2 50.000 82 37 3 205 285 40 118 5.96e-14 74.3
Msa0320090 AT5G18240.3 50.000 82 37 3 205 285 40 118 5.96e-14 74.3
Msa0320090 AT5G18240.5 50.000 82 37 3 205 285 40 118 6.50e-14 74.3
Msa0320090 AT5G18240.1 50.000 82 37 3 205 285 40 118 7.00e-14 74.3
Msa0320090 AT5G18240.4 50.000 82 37 3 205 285 40 118 7.00e-14 74.3
Msa0320090 AT4G18020.8 36.029 136 78 3 26 154 12 145 4.85e-13 72.0
Msa0320090 AT4G18020.8 51.613 62 29 1 207 268 294 354 6.59e-13 71.6
Msa0320090 AT4G18020.11 36.029 136 78 3 26 154 12 145 4.85e-13 72.0
Msa0320090 AT4G18020.11 51.613 62 29 1 207 268 294 354 6.59e-13 71.6
Msa0320090 AT4G18020.4 36.029 136 78 3 26 154 12 145 4.85e-13 72.0
Msa0320090 AT4G18020.4 51.613 62 29 1 207 268 294 354 6.59e-13 71.6
Msa0320090 AT4G18020.5 36.029 136 78 3 26 154 12 145 4.85e-13 72.0
Msa0320090 AT4G18020.5 51.613 62 29 1 207 268 294 354 6.59e-13 71.6
Msa0320090 AT4G18020.10 36.029 136 78 3 26 154 12 145 4.85e-13 72.0
Msa0320090 AT4G18020.10 51.613 62 29 1 207 268 294 354 6.59e-13 71.6
Msa0320090 AT4G18020.7 36.029 136 78 3 26 154 12 145 4.85e-13 72.0
Msa0320090 AT4G18020.7 51.613 62 29 1 207 268 294 354 6.59e-13 71.6
Msa0320090 AT3G04030.2 48.052 77 33 2 206 282 41 110 5.16e-13 71.6
Msa0320090 AT4G18020.3 36.029 136 78 3 26 154 12 145 6.97e-13 72.0
Msa0320090 AT4G18020.3 51.613 62 29 1 207 268 294 354 7.34e-13 71.6
Msa0320090 AT4G18020.2 36.029 136 78 3 26 154 12 145 6.97e-13 72.0
Msa0320090 AT4G18020.2 51.613 62 29 1 207 268 294 354 7.34e-13 71.6
Msa0320090 AT4G18020.1 36.029 136 78 3 26 154 12 145 6.97e-13 72.0
Msa0320090 AT4G18020.1 51.613 62 29 1 207 268 294 354 7.34e-13 71.6
Msa0320090 AT4G18020.6 36.029 136 78 3 26 154 12 145 6.97e-13 72.0
Msa0320090 AT4G18020.6 51.613 62 29 1 207 268 294 354 7.34e-13 71.6
Msa0320090 AT4G18020.9 36.029 136 78 3 26 154 12 145 6.97e-13 72.0
Msa0320090 AT4G18020.9 51.613 62 29 1 207 268 294 354 7.34e-13 71.6
Msa0320090 AT1G69580.2 54.237 59 26 1 206 263 30 88 8.06e-13 70.5
Msa0320090 AT1G69580.1 54.237 59 26 1 206 263 30 88 8.14e-13 70.5
Msa0320090 AT3G24120.1 52.308 65 27 2 203 263 31 95 3.32e-12 68.2
Msa0320090 AT3G24120.2 52.308 65 27 2 203 263 31 95 3.46e-12 68.2
Msa0320090 AT1G79430.2 53.333 60 27 1 205 263 29 88 3.76e-12 68.6
Msa0320090 AT3G25790.1 38.655 119 61 4 214 330 200 308 7.67e-12 67.8
Msa0320090 AT4G13640.1 52.308 65 27 2 203 263 27 91 7.71e-12 67.0
Msa0320090 AT4G13640.2 52.308 65 27 2 203 263 27 91 7.73e-12 67.0
Msa0320090 AT1G49560.1 36.283 113 64 2 209 313 191 303 2.51e-11 65.9
Msa0320090 AT3G12730.1 49.275 69 28 2 202 263 9 77 2.99e-11 64.3
Msa0320090 AT1G25550.1 45.070 71 38 1 198 267 197 267 3.59e-11 65.5
Msa0320090 AT1G68670.1 45.679 81 42 2 194 272 198 278 5.43e-11 65.1
Msa0320090 AT5G29000.4 45.714 70 35 2 196 262 215 284 6.00e-11 64.3
Msa0320090 AT2G03500.1 47.059 68 35 1 207 273 230 297 8.33e-11 65.1

Find 142 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGCTTCATCAACAGTTTA+TGG 0.134096 2_4:-20357602 Msa0320090:CDS
CTTCAAACCCTTTCAGCTTC+TGG 0.197138 2_4:-20355860 Msa0320090:CDS
CCTTATCTCCGACCAGTTTC+CGG 0.220153 2_4:-20358654 Msa0320090:CDS
GTTGTTGTTGTTGAGTTTCA+TGG 0.237423 2_4:+20358721 None:intergenic
GAAGCTACTTCGGGAATTAA+AGG 0.286940 2_4:-20355407 Msa0320090:CDS
TATGGATGGATTCAAACTTT+TGG 0.295920 2_4:-20358094 Msa0320090:CDS
ATTAAACTAAGAAAATTAAT+TGG 0.296217 2_4:+20358853 None:intergenic
GATAATGAGTTTGACTTAGA+TGG 0.303961 2_4:-20354899 Msa0320090:CDS
TGCAAGTTACAACTGTTATA+AGG 0.306416 2_4:-20358911 Msa0320090:five_prime_UTR
AGTACGCCAGAGTCAATATT+TGG 0.308653 2_4:-20355908 Msa0320090:CDS
CACCAGTCTGCTCAATCCTT+TGG 0.321223 2_4:-20355665 Msa0320090:CDS
TTGAAGATCAATTTCATTTA+CGG 0.326626 2_4:+20355877 None:intergenic
GAGAACTCAAAACTAAGATT+TGG 0.328580 2_4:-20355782 Msa0320090:CDS
TTCAGCTTCTGGCCAGTTCT+CGG 0.333161 2_4:-20355849 Msa0320090:CDS
ACTTCGGGAATTAAAGGATT+AGG 0.335057 2_4:-20355401 Msa0320090:CDS
AAGAAGATGAAGCAGATGAT+AGG 0.337750 2_4:-20357669 Msa0320090:CDS
AAGAAAATTAATTGGTTTGT+GGG 0.341269 2_4:+20358861 None:intergenic
TGCTTTGGCTCAATGTTGAT+AGG 0.342601 2_4:+20355701 None:intergenic
TTGAGCAGACTGGTGAAAAT+TGG 0.352834 2_4:+20355673 None:intergenic
TGAGGTGTTGACCAACATTA+TGG 0.359965 2_4:+20355171 None:intergenic
TGAAAATTGGCAAACTGCTT+TGG 0.368522 2_4:+20355686 None:intergenic
CGACGTGCATATGCCTGATA+TGG 0.368808 2_4:-20358112 Msa0320090:CDS
TCGAGGCTTTGAAGAATATA+TGG 0.369544 2_4:-20357843 Msa0320090:CDS
CTTCGGGAATTAAAGGATTA+GGG 0.371380 2_4:-20355400 Msa0320090:CDS
AAACAATGCTTACTAATAAC+AGG 0.383212 2_4:+20358045 None:intergenic
CTATTGACTGATATTCCATT+TGG 0.387671 2_4:+20355491 None:intergenic
CACGGAGACCCGCCGGAAAC+TGG 0.388410 2_4:+20358642 None:intergenic
TAAGAAAATTAATTGGTTTG+TGG 0.396703 2_4:+20358860 None:intergenic
TTCGGAAGAGAAAGAATAAC+TGG 0.397525 2_4:-20357810 Msa0320090:CDS
TCATTTAGCATCTGACCTCT+TGG 0.399993 2_4:+20355569 None:intergenic
CTAGACTTTGCACCGAGAAC+TGG 0.401730 2_4:+20355837 None:intergenic
AAACGTTGCCAGTCATCTTC+AGG 0.402049 2_4:-20357228 Msa0320090:intron
TAACAGGATCTGTTATAAAC+TGG 0.403457 2_4:+20354857 None:intergenic
AACCTCAGCTCTCTTGCATT+TGG 0.403620 2_4:+20358185 None:intergenic
CCATCAAAAGTCCAATGATT+GGG 0.406485 2_4:-20355348 Msa0320090:CDS
ATTTGCTAATCCCCAATCAT+TGG 0.406561 2_4:+20355337 None:intergenic
CAAAGAAGCCTCGAGTTGTT+TGG 0.412556 2_4:-20357630 Msa0320090:CDS
TATTCAAGTTACTTTGCTGC+TGG 0.418842 2_4:+20355942 None:intergenic
ATGGAAATGATGAATGTTCC+TGG 0.426157 2_4:-20357263 Msa0320090:CDS
AGTTTGAATCCATCCATATC+AGG 0.428415 2_4:+20358099 None:intergenic
TCCATCAAAAGTCCAATGAT+TGG 0.430749 2_4:-20355349 Msa0320090:CDS
ATAAGGTTGCCGGAGTTTGA+TGG 0.460200 2_4:+20358671 None:intergenic
TATGGCTGTTGTGAATCAAT+TGG 0.460490 2_4:-20357584 Msa0320090:CDS
TGATTAGAAAGAGAGCTAAC+AGG 0.464856 2_4:+20354841 None:intergenic
TGGAAAGATCTGAAGCAATC+TGG 0.465336 2_4:-20357790 Msa0320090:CDS
TTCTCGCAGCACAAAGGCGT+TGG 0.468445 2_4:-20354929 Msa0320090:intron
CCGGAAACTGGTCGGAGATA+AGG 0.470882 2_4:+20358654 None:intergenic
TTGTCGAGTCTGTTGGATAG+AGG 0.472904 2_4:+20355223 None:intergenic
ATGGCTGTTGTGAATCAATT+GGG 0.473696 2_4:-20357583 Msa0320090:CDS
ATGCAACCTACAGGACCAAA+TGG 0.473881 2_4:-20355506 Msa0320090:CDS
ACATATGAGCAGCAGTAAAC+CGG 0.474063 2_4:-20355744 Msa0320090:CDS
CTTAATGAATTGTCGACAAA+AGG 0.475530 2_4:+20355143 None:intergenic
CTAGCCAAGCTTCAAGCAGC+AGG 0.477941 2_4:-20355818 Msa0320090:CDS
GGAACATATTGGATTGGAGA+TGG 0.480393 2_4:-20358073 Msa0320090:CDS
AGAAGATGAAGCAGATGATA+GGG 0.481453 2_4:-20357668 Msa0320090:CDS
AGATCAATGTTGCCTTGTAA+AGG 0.489412 2_4:+20355278 None:intergenic
TTCCCTCTTAGATGCACTCC+GGG 0.489466 2_4:-20355467 Msa0320090:CDS
GTAGGTTGCATTAAAGATGA+TGG 0.494028 2_4:+20355518 None:intergenic
CAACATGCAAATCCTTTACA+AGG 0.495519 2_4:-20355290 Msa0320090:CDS
TACTCATCTTCAACGAATGA+AGG 0.499328 2_4:-20357718 Msa0320090:CDS
GATATTCCATTTGGTCCTGT+AGG 0.499380 2_4:+20355500 None:intergenic
GCTTTGGCTCAATGTTGATA+GGG 0.500235 2_4:+20355702 None:intergenic
CAAAACTAAGATTTGGAGAT+GGG 0.507173 2_4:-20355775 Msa0320090:CDS
CAAGGATCATGAGGCAAGTA+GGG 0.508406 2_4:+20358600 None:intergenic
CTGGTCGGAGATAAGGTTGC+CGG 0.509887 2_4:+20358661 None:intergenic
ATTCAAGTTACTTTGCTGCT+GGG 0.515195 2_4:+20355943 None:intergenic
GTTGAGAAGCATCATATGTC+AGG 0.515544 2_4:+20355309 None:intergenic
CATGAGCGTATTTCTGAACC+AGG 0.515894 2_4:-20355045 Msa0320090:intron
GATTGGGGATTAGCAAATAC+AGG 0.520281 2_4:-20355332 Msa0320090:CDS
TTCAAAGCCTCGATTCGCAC+AGG 0.523205 2_4:+20357853 None:intergenic
ATATATGGCAGCATGTGGTT+CGG 0.524503 2_4:-20357828 Msa0320090:CDS
TCAAGGATCATGAGGCAAGT+AGG 0.525643 2_4:+20358599 None:intergenic
ATATCCAGTAGCAGTACAAA+AGG 0.527621 2_4:-20355443 Msa0320090:CDS
TGACTGACTTGATCAGAGAA+GGG 0.534175 2_4:+20355077 None:intergenic
AAACCGGTGAACTTTCTTCA+CGG 0.535622 2_4:-20355728 Msa0320090:CDS
ATACAAATTCTCATGCTACA+AGG 0.536556 2_4:-20355544 Msa0320090:CDS
TCAAAACTAAGATTTGGAGA+TGG 0.536886 2_4:-20355776 Msa0320090:CDS
TTGACTGACTTGATCAGAGA+AGG 0.537467 2_4:+20355076 None:intergenic
TTGTATCTTCGAAGGTTGAG+TGG 0.537963 2_4:-20355971 Msa0320090:CDS
GAACTGGCCAGAAGCTGAAA+GGG 0.541735 2_4:+20355853 None:intergenic
ATCTCCGACCAGTTTCCGGC+GGG 0.544362 2_4:-20358650 Msa0320090:CDS
TCGCATATTTGCGCTGCCAA+AGG 0.548078 2_4:+20355649 None:intergenic
AATACCGTTTGTATCTTCGA+AGG 0.548651 2_4:-20355979 Msa0320090:CDS
AGAACTGGCCAGAAGCTGAA+AGG 0.554761 2_4:+20355852 None:intergenic
TCATCTTTAATGCAACCTAC+AGG 0.556863 2_4:-20355515 Msa0320090:CDS
TTAGTGATGTCGGCTGATGA+TGG 0.559693 2_4:-20357931 Msa0320090:intron
ATACCCGGAGTGCATCTAAG+AGG 0.561462 2_4:+20355464 None:intergenic
ATATCATACCTGAAGATGAC+TGG 0.562314 2_4:+20357220 None:intergenic
AAGCCCTTGGTTGATGCAGA+TGG 0.564484 2_4:-20355603 Msa0320090:CDS
TAGTTGCCAATGTAAATAGT+TGG 0.567960 2_4:-20354818 Msa0320090:three_prime_UTR
GGAACACCAACTATTTACAT+TGG 0.570285 2_4:+20354812 None:intergenic
CTCTGATCAAGTCAGTCAAG+AGG 0.573459 2_4:-20355072 Msa0320090:CDS
TTGATCTCAATGTTTGTACT+CGG 0.576687 2_4:+20355101 None:intergenic
ATTCCGTGAAGAAAGTTCAC+CGG 0.576781 2_4:+20355725 None:intergenic
GTTCCTCCAAATATTGACTC+TGG 0.578483 2_4:+20355902 None:intergenic
TGCCAAAGGATTGAGCAGAC+TGG 0.579512 2_4:+20355663 None:intergenic
TTTCCCTCTTAGATGCACTC+CGG 0.583189 2_4:-20355468 Msa0320090:CDS
TTTGTCGACAATTCATTAAG+GGG 0.583507 2_4:-20355140 Msa0320090:CDS
TGACTCTGGCGTACTCATGA+AGG 0.583909 2_4:+20355916 None:intergenic
GCAAGAGCTCAAAGAAGAGG+AGG 0.587165 2_4:-20357696 Msa0320090:CDS
GACTGACTTGATCAGAGAAG+GGG 0.587939 2_4:+20355078 None:intergenic
ACAAGTACACGGAGACCCGC+CGG 0.589774 2_4:+20358635 None:intergenic
CAAGGTGATCACCATAATGT+TGG 0.591086 2_4:-20355182 Msa0320090:CDS
AAGTCCTGCTGCTTGAAGCT+TGG 0.592461 2_4:+20355814 None:intergenic
TGTCGACAAAAGGTGTATTG+AGG 0.593503 2_4:+20355153 None:intergenic
AGATGAGTAATTAGCATCAG+TGG 0.594629 2_4:+20357732 None:intergenic
CTGCTGCAAAGAGAAGCCCT+TGG 0.595593 2_4:-20355616 Msa0320090:CDS
TGGTGAAGTTGAGGTTGACA+TGG 0.599570 2_4:+20358691 None:intergenic
AAGATCAATTTCATTTACGG+AGG 0.607064 2_4:+20355880 None:intergenic
GAGCCATCTGCATCAACCAA+GGG 0.609724 2_4:+20355600 None:intergenic
TGAGCCATCTGCATCAACCA+AGG 0.610874 2_4:+20355599 None:intergenic
AATAGAGATGGTATGAGTCA+AGG 0.612883 2_4:-20355200 Msa0320090:CDS
TCAACCTTCGAAGATACAAA+CGG 0.613662 2_4:+20355975 None:intergenic
AATCAAACCTGTGCGAATCG+AGG 0.614923 2_4:-20357860 Msa0320090:CDS
TCAACTTCACCATCAAACTC+CGG 0.617812 2_4:-20358680 Msa0320090:CDS
TACCCGGAGTGCATCTAAGA+GGG 0.617885 2_4:+20355465 None:intergenic
CATCAAAAGTCCAATGATTG+GGG 0.619687 2_4:-20355347 Msa0320090:CDS
GTGCATATGCCTGATATGGA+TGG 0.621582 2_4:-20358108 Msa0320090:CDS
CAGACTCGACAAAATAGAGA+TGG 0.622886 2_4:-20355212 Msa0320090:CDS
AAGATTGAAGACCTTCATAG+AGG 0.625198 2_4:+20358558 None:intergenic
GCATTCTTTCAAGGATCATG+AGG 0.625199 2_4:+20358591 None:intergenic
TGGAAATGATGAATGTTCCT+GGG 0.628797 2_4:-20357262 Msa0320090:CDS
AAAGATCTGAAGCAATCTGG+TGG 0.628824 2_4:-20357787 Msa0320090:CDS
TATCTCCGACCAGTTTCCGG+CGG 0.629363 2_4:-20358651 Msa0320090:CDS
GAAGAATATATGGCAGCATG+TGG 0.629609 2_4:-20357833 Msa0320090:CDS
TTCGGGAATTAAAGGATTAG+GGG 0.632056 2_4:-20355399 Msa0320090:CDS
TTGTATTTCTCGCAGCACAA+AGG 0.634173 2_4:-20354935 Msa0320090:intron
CCACGATGGCCTAAAATCGA+CGG 0.634519 2_4:+20355251 None:intergenic
AAGGCAAGAGCTCAAAGAAG+AGG 0.635070 2_4:-20357699 Msa0320090:CDS
TCGGGAATTAAAGGATTAGG+GGG 0.636049 2_4:-20355398 Msa0320090:CDS
ACGCCAGAGTCAATATTTGG+AGG 0.638077 2_4:-20355905 Msa0320090:CDS
TCAATAGACCAAACAACTCG+AGG 0.639848 2_4:+20357622 None:intergenic
GGAGTTTGATGGTGAAGTTG+AGG 0.651951 2_4:+20358682 None:intergenic
CATCATCAACAACAAGTACA+CGG 0.653506 2_4:+20358624 None:intergenic
GAGACCCGCCGGAAACTGGT+CGG 0.661705 2_4:+20358646 None:intergenic
CAAGAGCTCAAAGAAGAGGA+GGG 0.663100 2_4:-20357695 Msa0320090:CDS
TACCAAATGCAAGAGAGCTG+AGG 0.664673 2_4:-20358187 Msa0320090:CDS
GAGTGATGATTAGATTCATG+TGG 0.665667 2_4:+20354791 None:intergenic
GTACTGCTACTGGATATACC+CGG 0.685345 2_4:+20355449 None:intergenic
ATGGCTCAGTCTCAACCAAG+AGG 0.702081 2_4:-20355584 Msa0320090:CDS
GTAATGAAAGGTGTGACACA+CGG 0.719143 2_4:-20357898 Msa0320090:CDS
ATAAACTGGAATGTTGTCTG+CGG 0.732217 2_4:+20354871 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAACTAAGAAAATTAAT+TGG + chr2_4:20354714-20354733 None:intergenic 10.0%
!! TCAGAACTAAAAATAAAAAT+GGG + chr2_4:20355165-20355184 None:intergenic 15.0%
!! ATCAGAACTAAAAATAAAAA+TGG + chr2_4:20355166-20355185 None:intergenic 15.0%
!!! AGAAATATTTAAGATTCTAT+GGG + chr2_4:20356183-20356202 None:intergenic 15.0%
!! TTTAACAATAACAAAAATAG+AGG + chr2_4:20356388-20356407 None:intergenic 15.0%
!! TAAAGCCTATTTAATTAAAT+AGG - chr2_4:20356654-20356673 Msa0320090:intron 15.0%
!! TTATACATAAAAAGCTTAAT+AGG + chr2_4:20356725-20356744 None:intergenic 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr2_4:20356855-20356874 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr2_4:20356982-20357001 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr2_4:20356981-20357000 Msa0320090:intron 15.0%
!! TAAATAATGAAATCTTACAA+AGG + chr2_4:20357121-20357140 None:intergenic 15.0%
!!! AATAAATGATTTGTCTATAA+AGG + chr2_4:20358594-20358613 None:intergenic 15.0%
!! TTAGTTTATGTAAAAATTTC+AGG - chr2_4:20358845-20358864 Msa0320090:five_prime_UTR 15.0%
!!! AAGAAAATTAATTGGTTTGT+GGG + chr2_4:20354706-20354725 None:intergenic 20.0%
!!! TAAGAAAATTAATTGGTTTG+TGG + chr2_4:20354707-20354726 None:intergenic 20.0%
!!! TTTTTTTGTTGTCTACTATT+TGG - chr2_4:20354811-20354830 Msa0320090:three_prime_UTR 20.0%
!!! TTTTAACACTAATTCATGAT+GGG + chr2_4:20355051-20355070 None:intergenic 20.0%
!!! TTTTTAACACTAATTCATGA+TGG + chr2_4:20355052-20355071 None:intergenic 20.0%
!! AAAAACTCAATCAAACAAAA+GGG + chr2_4:20355133-20355152 None:intergenic 20.0%
!! AAAAAACTCAATCAAACAAA+AGG + chr2_4:20355134-20355153 None:intergenic 20.0%
!!! TAAGTGTTTTTTTCAACTAT+TGG - chr2_4:20355254-20355273 Msa0320090:CDS 20.0%
!! ATATCTTGGAAAAACTTTAA+GGG + chr2_4:20356109-20356128 None:intergenic 20.0%
!! TATATCTTGGAAAAACTTTA+AGG + chr2_4:20356110-20356129 None:intergenic 20.0%
!!! AAATATTTAAGATTCTATGG+GGG + chr2_4:20356181-20356200 None:intergenic 20.0%
!!! GAAATATTTAAGATTCTATG+GGG + chr2_4:20356182-20356201 None:intergenic 20.0%
!!! CAGAAATATTTAAGATTCTA+TGG + chr2_4:20356184-20356203 None:intergenic 20.0%
!!! ATCATTTCCATAATCTTTTT+AGG + chr2_4:20356292-20356311 None:intergenic 20.0%
!! CTTCTAAACTAACTTATTAT+AGG + chr2_4:20356436-20356455 None:intergenic 20.0%
!!! ATAATAAGTTAGTTTAGAAG+TGG - chr2_4:20356436-20356455 Msa0320090:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr2_4:20356895-20356914 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr2_4:20356972-20356991 Msa0320090:intron 20.0%
!!! AGTAAAATAGGCTTTTAAAT+AGG - chr2_4:20357224-20357243 Msa0320090:intron 20.0%
!! TTGAAGATCAATTTCATTTA+CGG + chr2_4:20357690-20357709 None:intergenic 20.0%
!! TAAGGAAACATAGATATTTA+GGG + chr2_4:20358566-20358585 None:intergenic 20.0%
!! AGTGAAAAGTGATGATTTTA+TGG + chr2_4:20354755-20354774 None:intergenic 25.0%
! AGCATAATTCAAAAGAAAGA+TGG + chr2_4:20355201-20355220 None:intergenic 25.0%
!! GCTTTTGATATGATTTAGTA+TGG - chr2_4:20355218-20355237 Msa0320090:CDS 25.0%
!! AAAGTCTCAAACTTTAACTT+TGG + chr2_4:20355288-20355307 None:intergenic 25.0%
! CTTCTTAGAGAGAATAAAAA+CGG - chr2_4:20355411-20355430 Msa0320090:CDS 25.0%
! TTCTTAGAGAGAATAAAAAC+GGG - chr2_4:20355412-20355431 Msa0320090:CDS 25.0%
!!! TTCAAACTTTTGGAACATAT+TGG - chr2_4:20355480-20355499 Msa0320090:CDS 25.0%
! AAACAATGCTTACTAATAAC+AGG + chr2_4:20355522-20355541 None:intergenic 25.0%
! CAAGGACATAACATAATTAA+GGG + chr2_4:20356023-20356042 None:intergenic 25.0%
! AAATTGATATTGATATGCAG+AGG - chr2_4:20356261-20356280 Msa0320090:intron 25.0%
! CCTGACCTATTTAATTAAAT+AGG + chr2_4:20356662-20356681 None:intergenic 25.0%
! CCTATTTAATTAAATAGGTC+AGG - chr2_4:20356659-20356678 Msa0320090:intron 25.0%
! AACTTCAACGATATCAATAA+TGG + chr2_4:20356756-20356775 None:intergenic 25.0%
! CTAAATAACCAATCATATGA+AGG + chr2_4:20356798-20356817 None:intergenic 25.0%
!!! TTCAAAATGAGTGTCATTTT+AGG + chr2_4:20357063-20357082 None:intergenic 25.0%
!!! AAATGACACTCATTTTGAAA+CGG - chr2_4:20357064-20357083 Msa0320090:intron 25.0%
! ATGTAAGTCTACTACTAAAT+AGG + chr2_4:20357187-20357206 None:intergenic 25.0%
!! TTTTGTCGACAATTCATTAA+GGG - chr2_4:20358423-20358442 Msa0320090:intron 25.0%
! GTAAGGAAACATAGATATTT+AGG + chr2_4:20358567-20358586 None:intergenic 25.0%
! TTGTCTATAAAGGAAAAGTA+AGG + chr2_4:20358584-20358603 None:intergenic 25.0%
TGCAAGTTACAACTGTTATA+AGG - chr2_4:20354653-20354672 Msa0320090:intron 30.0%
! TTTGATTCTGTTTTGCTTGT+TGG - chr2_4:20355338-20355357 Msa0320090:CDS 30.0%
! TTGATTCTGTTTTGCTTGTT+GGG - chr2_4:20355339-20355358 Msa0320090:CDS 30.0%
!! TATGGATGGATTCAAACTTT+TGG - chr2_4:20355470-20355489 Msa0320090:CDS 30.0%
!!! ACTTTTGGAACATATTGGAT+TGG - chr2_4:20355485-20355504 Msa0320090:CDS 30.0%
!!! TGAATGTGTTTTAGTGATGT+CGG - chr2_4:20355623-20355642 Msa0320090:CDS 30.0%
GCAAGGACATAACATAATTA+AGG + chr2_4:20356024-20356043 None:intergenic 30.0%
! TGAAAGAGAACATTTTTGCA+AGG + chr2_4:20356041-20356060 None:intergenic 30.0%
!! TCATCTTTGTTTGTTTTCCA+CGG - chr2_4:20356058-20356077 Msa0320090:intron 30.0%
! TTGGAAAAACTTTAAGGGAA+TGG + chr2_4:20356104-20356123 None:intergenic 30.0%
GAATCACAAGGATTATATCT+TGG + chr2_4:20356123-20356142 None:intergenic 30.0%
AACAATCTTGTAGAATCACA+AGG + chr2_4:20356135-20356154 None:intergenic 30.0%
! ATAAGTTAGTTTAGAAGTGG+TGG - chr2_4:20356439-20356458 Msa0320090:intron 30.0%
!! TCGTACAAACTGATTTTGTA+AGG - chr2_4:20356472-20356491 Msa0320090:intron 30.0%
!! CGTACAAACTGATTTTGTAA+GGG - chr2_4:20356473-20356492 Msa0320090:intron 30.0%
CCTATATAAGATCTCATGTA+GGG - chr2_4:20356528-20356547 Msa0320090:intron 30.0%
CTATATAAGATCTCATGTAG+GGG - chr2_4:20356529-20356548 Msa0320090:intron 30.0%
TAATTAAATAGGTCAGGCTA+AGG - chr2_4:20356665-20356684 Msa0320090:intron 30.0%
ACATAAAAAGCTTAATAGGC+CGG + chr2_4:20356721-20356740 None:intergenic 30.0%
CACATATATTCATGTGCTTT+AGG - chr2_4:20357145-20357164 Msa0320090:intron 30.0%
AAATAGGCCAAAATTTACGA+AGG + chr2_4:20357171-20357190 None:intergenic 30.0%
!! GCTAGACTTTAGAGTAAAAT+AGG - chr2_4:20357212-20357231 Msa0320090:intron 30.0%
! TAGGCTTTTAAATAGGCTTT+CGG - chr2_4:20357231-20357250 Msa0320090:CDS 30.0%
!!! AGGCCTATAATTTTTGAAGT+AGG - chr2_4:20357326-20357345 Msa0320090:intron 30.0%
TGGCCTACTTCAAAAATTAT+AGG + chr2_4:20357332-20357351 None:intergenic 30.0%
!!! TATAATTTTTGAAGTAGGCC+AGG - chr2_4:20357331-20357350 Msa0320090:intron 30.0%
ACTGTAACTCTTAACATTCA+AGG + chr2_4:20357504-20357523 None:intergenic 30.0%
AAGATCAATTTCATTTACGG+AGG + chr2_4:20357687-20357706 None:intergenic 30.0%
!!! AATCTTAGTTTTGAGTTCTC+AGG + chr2_4:20357782-20357801 None:intergenic 30.0%
GAGAACTCAAAACTAAGATT+TGG - chr2_4:20357782-20357801 Msa0320090:CDS 30.0%
TCAAAACTAAGATTTGGAGA+TGG - chr2_4:20357788-20357807 Msa0320090:CDS 30.0%
CAAAACTAAGATTTGGAGAT+GGG - chr2_4:20357789-20357808 Msa0320090:CDS 30.0%
ATACAAATTCTCATGCTACA+AGG - chr2_4:20358020-20358039 Msa0320090:intron 30.0%
! CTATTGACTGATATTCCATT+TGG + chr2_4:20358076-20358095 None:intergenic 30.0%
CTTAATGAATTGTCGACAAA+AGG + chr2_4:20358424-20358443 None:intergenic 30.0%
! CTTTTGTCGACAATTCATTA+AGG - chr2_4:20358422-20358441 Msa0320090:intron 30.0%
TTTGTCGACAATTCATTAAG+GGG - chr2_4:20358424-20358443 Msa0320090:intron 30.0%
TTGATCTCAATGTTTGTACT+CGG + chr2_4:20358466-20358485 None:intergenic 30.0%
! GATAATGAGTTTGACTTAGA+TGG - chr2_4:20358665-20358684 Msa0320090:CDS 30.0%
TAACAGGATCTGTTATAAAC+TGG + chr2_4:20358710-20358729 None:intergenic 30.0%
TAGTTGCCAATGTAAATAGT+TGG - chr2_4:20358746-20358765 Msa0320090:five_prime_UTR 30.0%
ATGTAAAAATTTCAGGCTTC+AGG - chr2_4:20358852-20358871 Msa0320090:five_prime_UTR 30.0%
TGTAAAAATTTCAGGCTTCA+GGG - chr2_4:20358853-20358872 Msa0320090:five_prime_UTR 30.0%
! GTTGTTGTTGTTGAGTTTCA+TGG + chr2_4:20354846-20354865 None:intergenic 35.0%
CATCATCAACAACAAGTACA+CGG + chr2_4:20354943-20354962 None:intergenic 35.0%
! AAAAACGGAGCATTCTTTCA+AGG + chr2_4:20354985-20355004 None:intergenic 35.0%
AAGATTGAAGACCTTCATAG+AGG + chr2_4:20355009-20355028 None:intergenic 35.0%
AGTTTGAATCCATCCATATC+AGG + chr2_4:20355468-20355487 None:intergenic 35.0%
! GGAAAAAACGTGGTAATGAA+AGG - chr2_4:20355654-20355673 Msa0320090:CDS 35.0%
!! TCGAGGCTTTGAAGAATATA+TGG - chr2_4:20355721-20355740 Msa0320090:CDS 35.0%
TTCGGAAGAGAAAGAATAAC+TGG - chr2_4:20355754-20355773 Msa0320090:CDS 35.0%
AGATGAGTAATTAGCATCAG+TGG + chr2_4:20355835-20355854 None:intergenic 35.0%
TACTCATCTTCAACGAATGA+AGG - chr2_4:20355846-20355865 Msa0320090:CDS 35.0%
AAGAAGATGAAGCAGATGAT+AGG - chr2_4:20355895-20355914 Msa0320090:CDS 35.0%
AGAAGATGAAGCAGATGATA+GGG - chr2_4:20355896-20355915 Msa0320090:CDS 35.0%
TGAGCTTCATCAACAGTTTA+TGG - chr2_4:20355962-20355981 Msa0320090:CDS 35.0%
TATGGCTGTTGTGAATCAAT+TGG - chr2_4:20355980-20355999 Msa0320090:CDS 35.0%
ATGGCTGTTGTGAATCAATT+GGG - chr2_4:20355981-20356000 Msa0320090:CDS 35.0%
TAAGATTCTATGGGGGAAAA+GGG + chr2_4:20356174-20356193 None:intergenic 35.0%
TTAAGATTCTATGGGGGAAA+AGG + chr2_4:20356175-20356194 None:intergenic 35.0%
GGCTGTTCCTAAAAAGATTA+TGG - chr2_4:20356282-20356301 Msa0320090:intron 35.0%
ATGGAAATGATGAATGTTCC+TGG - chr2_4:20356301-20356320 Msa0320090:intron 35.0%
TGGAAATGATGAATGTTCCT+GGG - chr2_4:20356302-20356321 Msa0320090:intron 35.0%
ATATCATACCTGAAGATGAC+TGG + chr2_4:20356347-20356366 None:intergenic 35.0%
CAAAATCAGTTTGTACGATG+AGG + chr2_4:20356470-20356489 None:intergenic 35.0%
GCCTATATAAGATCTCATGT+AGG - chr2_4:20356527-20356546 Msa0320090:intron 35.0%
CCCTACATGAGATCTTATAT+AGG + chr2_4:20356531-20356550 None:intergenic 35.0%
CTTTATAAAAAGCTTGAGCC+TGG + chr2_4:20356639-20356658 None:intergenic 35.0%
AACTCAAGCCTTCATATGAT+TGG - chr2_4:20356787-20356806 Msa0320090:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr2_4:20356829-20356848 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr2_4:20356929-20356948 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr2_4:20356933-20356952 None:intergenic 35.0%
! CTTTAGGCCTTCGTAAATTT+TGG - chr2_4:20357161-20357180 Msa0320090:intron 35.0%
! AGGCTTTTAAATAGGCTTTC+GGG - chr2_4:20357232-20357251 Msa0320090:CDS 35.0%
GTAACTCTTAACATTCAAGG+TGG + chr2_4:20357501-20357520 None:intergenic 35.0%
AATACCGTTTGTATCTTCGA+AGG - chr2_4:20357585-20357604 Msa0320090:CDS 35.0%
TCAACCTTCGAAGATACAAA+CGG + chr2_4:20357592-20357611 None:intergenic 35.0%
! ATTCAAGTTACTTTGCTGCT+GGG + chr2_4:20357624-20357643 None:intergenic 35.0%
! TATTCAAGTTACTTTGCTGC+TGG + chr2_4:20357625-20357644 None:intergenic 35.0%
TGAAAATTGGCAAACTGCTT+TGG + chr2_4:20357881-20357900 None:intergenic 35.0%
GTAGGTTGCATTAAAGATGA+TGG + chr2_4:20358049-20358068 None:intergenic 35.0%
TCATCTTTAATGCAACCTAC+AGG - chr2_4:20358049-20358068 Msa0320090:intron 35.0%
ATATCCAGTAGCAGTACAAA+AGG - chr2_4:20358121-20358140 Msa0320090:CDS 35.0%
!! TACAAAAGGCGTGTTTTATG+CGG - chr2_4:20358135-20358154 Msa0320090:CDS 35.0%
ACTTCGGGAATTAAAGGATT+AGG - chr2_4:20358163-20358182 Msa0320090:CDS 35.0%
CTTCGGGAATTAAAGGATTA+GGG - chr2_4:20358164-20358183 Msa0320090:CDS 35.0%
TTCGGGAATTAAAGGATTAG+GGG - chr2_4:20358165-20358184 Msa0320090:CDS 35.0%
TCCATCAAAAGTCCAATGAT+TGG - chr2_4:20358215-20358234 Msa0320090:intron 35.0%
CCATCAAAAGTCCAATGATT+GGG - chr2_4:20358216-20358235 Msa0320090:intron 35.0%
CATCAAAAGTCCAATGATTG+GGG - chr2_4:20358217-20358236 Msa0320090:intron 35.0%
! ATTTGCTAATCCCCAATCAT+TGG + chr2_4:20358230-20358249 None:intergenic 35.0%
CAACATGCAAATCCTTTACA+AGG - chr2_4:20358274-20358293 Msa0320090:intron 35.0%
AGATCAATGTTGCCTTGTAA+AGG + chr2_4:20358289-20358308 None:intergenic 35.0%
AATAGAGATGGTATGAGTCA+AGG - chr2_4:20358364-20358383 Msa0320090:intron 35.0%
! GATATTTAGGGTCAACAGAA+AGG + chr2_4:20358554-20358573 None:intergenic 35.0%
ATAAACTGGAATGTTGTCTG+CGG + chr2_4:20358696-20358715 None:intergenic 35.0%
TGATTAGAAAGAGAGCTAAC+AGG + chr2_4:20358726-20358745 None:intergenic 35.0%
GGAACACCAACTATTTACAT+TGG + chr2_4:20358755-20358774 None:intergenic 35.0%
GAGTGATGATTAGATTCATG+TGG + chr2_4:20358776-20358795 None:intergenic 35.0%
TCAACTTCACCATCAAACTC+CGG - chr2_4:20354884-20354903 Msa0320090:CDS 40.0%
GCATTCTTTCAAGGATCATG+AGG + chr2_4:20354976-20354995 None:intergenic 40.0%
GACCTTCATAGAGGCAAAAA+CGG + chr2_4:20355000-20355019 None:intergenic 40.0%
! GGAACATATTGGATTGGAGA+TGG - chr2_4:20355491-20355510 Msa0320090:CDS 40.0%
! GTAATGAAAGGTGTGACACA+CGG - chr2_4:20355666-20355685 Msa0320090:CDS 40.0%
GAAGAATATATGGCAGCATG+TGG - chr2_4:20355731-20355750 Msa0320090:CDS 40.0%
ATATATGGCAGCATGTGGTT+CGG - chr2_4:20355736-20355755 Msa0320090:CDS 40.0%
! TGGAAAGATCTGAAGCAATC+TGG - chr2_4:20355774-20355793 Msa0320090:CDS 40.0%
! AAAGATCTGAAGCAATCTGG+TGG - chr2_4:20355777-20355796 Msa0320090:CDS 40.0%
TCAATAGACCAAACAACTCG+AGG + chr2_4:20355945-20355964 None:intergenic 40.0%
GGTCATATCTCATCTAACGT+GGG + chr2_4:20356415-20356434 None:intergenic 40.0%
AGGTCATATCTCATCTAACG+TGG + chr2_4:20356416-20356435 None:intergenic 40.0%
TATAAGATCTCATGTAGGGG+TGG - chr2_4:20356532-20356551 Msa0320090:intron 40.0%
ATAAGATCTCATGTAGGGGT+GGG - chr2_4:20356533-20356552 Msa0320090:intron 40.0%
CTTTAAATAGGCTAGGCCAT+AGG + chr2_4:20356584-20356603 None:intergenic 40.0%
!! AGCTAGGCTTTAAATAGGCT+AGG + chr2_4:20356591-20356610 None:intergenic 40.0%
! AGCCTATTTAAAGCCTAGCT+CGG - chr2_4:20356591-20356610 Msa0320090:intron 40.0%
! GCCTTGTTAATAAACGAGCT+GGG + chr2_4:20356617-20356636 None:intergenic 40.0%
AAAAAGCCTATTAAGCCCGT+CGG - chr2_4:20356694-20356713 Msa0320090:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr2_4:20357068-20357087 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr2_4:20356930-20356949 None:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG - chr2_4:20357067-20357086 Msa0320090:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2_4:20357068-20357087 Msa0320090:intron 40.0%
GGAGGGAGTAGTAGATATAT+TGG - chr2_4:20357085-20357104 Msa0320090:intron 40.0%
GCTTCATCAGGCCTTTAAAT+AGG - chr2_4:20357254-20357273 Msa0320090:CDS 40.0%
AAAAATTATAGGCCTGAGCC+TGG + chr2_4:20357321-20357340 None:intergenic 40.0%
ATGTCCACTTATCAGTGTGA+GGG - chr2_4:20357454-20357473 Msa0320090:intron 40.0%
TTGTATCTTCGAAGGTTGAG+TGG - chr2_4:20357593-20357612 Msa0320090:CDS 40.0%
AGTACGCCAGAGTCAATATT+TGG - chr2_4:20357656-20357675 Msa0320090:CDS 40.0%
!! GTTCCTCCAAATATTGACTC+TGG + chr2_4:20357665-20357684 None:intergenic 40.0%
ACATATGAGCAGCAGTAAAC+CGG - chr2_4:20357820-20357839 Msa0320090:CDS 40.0%
AAACCGGTGAACTTTCTTCA+CGG - chr2_4:20357836-20357855 Msa0320090:CDS 40.0%
ATTCCGTGAAGAAAGTTCAC+CGG + chr2_4:20357842-20357861 None:intergenic 40.0%
! GCTTTGGCTCAATGTTGATA+GGG + chr2_4:20357865-20357884 None:intergenic 40.0%
! TGCTTTGGCTCAATGTTGAT+AGG + chr2_4:20357866-20357885 None:intergenic 40.0%
TTGAGCAGACTGGTGAAAAT+TGG + chr2_4:20357894-20357913 None:intergenic 40.0%
TCATTTAGCATCTGACCTCT+TGG + chr2_4:20357998-20358017 None:intergenic 40.0%
GATATTCCATTTGGTCCTGT+AGG + chr2_4:20358067-20358086 None:intergenic 40.0%
! GTTTTATGCGGAAGCTACTT+CGG - chr2_4:20358147-20358166 Msa0320090:CDS 40.0%
! TTTTATGCGGAAGCTACTTC+GGG - chr2_4:20358148-20358167 Msa0320090:CDS 40.0%
GAAGCTACTTCGGGAATTAA+AGG - chr2_4:20358157-20358176 Msa0320090:CDS 40.0%
TCGGGAATTAAAGGATTAGG+GGG - chr2_4:20358166-20358185 Msa0320090:CDS 40.0%
! CCCAATCATTGGACTTTTGA+TGG + chr2_4:20358219-20358238 None:intergenic 40.0%
! GATTGGGGATTAGCAAATAC+AGG - chr2_4:20358232-20358251 Msa0320090:intron 40.0%
!! GTTGAGAAGCATCATATGTC+AGG + chr2_4:20358258-20358277 None:intergenic 40.0%
! CTCTATTTTGTCGAGTCTGT+TGG + chr2_4:20358351-20358370 None:intergenic 40.0%
CAGACTCGACAAAATAGAGA+TGG - chr2_4:20358352-20358371 Msa0320090:intron 40.0%
CAAGGTGATCACCATAATGT+TGG - chr2_4:20358382-20358401 Msa0320090:intron 40.0%
!! TGAGGTGTTGACCAACATTA+TGG + chr2_4:20358396-20358415 None:intergenic 40.0%
! TGTCGACAAAAGGTGTATTG+AGG + chr2_4:20358414-20358433 None:intergenic 40.0%
!! TGACTGACTTGATCAGAGAA+GGG + chr2_4:20358490-20358509 None:intergenic 40.0%
!! TTGACTGACTTGATCAGAGA+AGG + chr2_4:20358491-20358510 None:intergenic 40.0%
ACAGAAAGGAAAAACCAACC+TGG + chr2_4:20358540-20358559 None:intergenic 40.0%
TTGTATTTCTCGCAGCACAA+AGG - chr2_4:20358629-20358648 Msa0320090:CDS 40.0%
TGGTGAAGTTGAGGTTGACA+TGG + chr2_4:20354876-20354895 None:intergenic 45.0%
!! GGAGTTTGATGGTGAAGTTG+AGG + chr2_4:20354885-20354904 None:intergenic 45.0%
ATAAGGTTGCCGGAGTTTGA+TGG + chr2_4:20354896-20354915 None:intergenic 45.0%
CAAGGATCATGAGGCAAGTA+GGG + chr2_4:20354967-20354986 None:intergenic 45.0%
TCAAGGATCATGAGGCAAGT+AGG + chr2_4:20354968-20354987 None:intergenic 45.0%
!! CTCCGTTTTTGCCTCTATGA+AGG - chr2_4:20354995-20355014 Msa0320090:intron 45.0%
TACCAAATGCAAGAGAGCTG+AGG - chr2_4:20355377-20355396 Msa0320090:CDS 45.0%
AACCTCAGCTCTCTTGCATT+TGG + chr2_4:20355382-20355401 None:intergenic 45.0%
GTGCATATGCCTGATATGGA+TGG - chr2_4:20355456-20355475 Msa0320090:CDS 45.0%
! TTAGTGATGTCGGCTGATGA+TGG - chr2_4:20355633-20355652 Msa0320090:CDS 45.0%
!! GGCTGATGATGGAAAAAACG+TGG - chr2_4:20355644-20355663 Msa0320090:CDS 45.0%
AATCAAACCTGTGCGAATCG+AGG - chr2_4:20355704-20355723 Msa0320090:CDS 45.0%
AAGGCAAGAGCTCAAAGAAG+AGG - chr2_4:20355865-20355884 Msa0320090:CDS 45.0%
CAAGAGCTCAAAGAAGAGGA+GGG - chr2_4:20355869-20355888 Msa0320090:CDS 45.0%
! CAAAGAAGCCTCGAGTTGTT+TGG - chr2_4:20355934-20355953 Msa0320090:CDS 45.0%
GTACGTTAGATGAGATACCG+TGG + chr2_4:20356078-20356097 None:intergenic 45.0%
AAACGTTGCCAGTCATCTTC+AGG - chr2_4:20356336-20356355 Msa0320090:intron 45.0%
GCCCAGCTCGTTTATTAACA+AGG - chr2_4:20356613-20356632 Msa0320090:intron 45.0%
!! GGCCTTGTTAATAAACGAGC+TGG + chr2_4:20356618-20356637 None:intergenic 45.0%
GCTCGTTTATTAACAAGGCC+AGG - chr2_4:20356618-20356637 Msa0320090:intron 45.0%
AAAAGCCTATTAAGCCCGTC+GGG - chr2_4:20356695-20356714 Msa0320090:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr2_4:20356826-20356845 None:intergenic 45.0%
ATCAGGCCTTTAAATAGGCC+AGG - chr2_4:20357259-20357278 Msa0320090:CDS 45.0%
CCTCGAAATTGAGCCTATGA+CGG - chr2_4:20357287-20357306 Msa0320090:intron 45.0%
CTCGAAATTGAGCCTATGAC+GGG - chr2_4:20357288-20357307 Msa0320090:intron 45.0%
!! TTGAGCCTATGACGGGTAAT+AGG - chr2_4:20357295-20357314 Msa0320090:intron 45.0%
!!! TTTTTGAAGTAGGCCAGGCT+TGG - chr2_4:20357336-20357355 Msa0320090:intron 45.0%
!!! TTTTGAAGTAGGCCAGGCTT+GGG - chr2_4:20357337-20357356 Msa0320090:intron 45.0%
TAGCCTATTTCCACCCTCAT+GGG - chr2_4:20357382-20357401 Msa0320090:intron 45.0%
CACACTGATAAGTGGACATC+TGG + chr2_4:20357453-20357472 None:intergenic 45.0%
GATGTCCACTTATCAGTGTG+AGG - chr2_4:20357453-20357472 Msa0320090:intron 45.0%
TGTCCACTTATCAGTGTGAG+GGG - chr2_4:20357455-20357474 Msa0320090:intron 45.0%
ACGCCAGAGTCAATATTTGG+AGG - chr2_4:20357659-20357678 Msa0320090:CDS 45.0%
CTTCAAACCCTTTCAGCTTC+TGG - chr2_4:20357704-20357723 Msa0320090:CDS 45.0%
ATGCAACCTACAGGACCAAA+TGG - chr2_4:20358058-20358077 Msa0320090:CDS 45.0%
TTTCCCTCTTAGATGCACTC+CGG - chr2_4:20358096-20358115 Msa0320090:CDS 45.0%
GTACTGCTACTGGATATACC+CGG + chr2_4:20358118-20358137 None:intergenic 45.0%
GGATAGAGGAAAAACCACGA+TGG + chr2_4:20358330-20358349 None:intergenic 45.0%
TTGTCGAGTCTGTTGGATAG+AGG + chr2_4:20358344-20358363 None:intergenic 45.0%
!! GACTGACTTGATCAGAGAAG+GGG + chr2_4:20358489-20358508 None:intergenic 45.0%
CTCTGATCAAGTCAGTCAAG+AGG - chr2_4:20358492-20358511 Msa0320090:intron 45.0%
! CATGAGCGTATTTCTGAACC+AGG - chr2_4:20358519-20358538 Msa0320090:intron 45.0%
! AGCGTATTTCTGAACCAGGT+TGG - chr2_4:20358523-20358542 Msa0320090:intron 45.0%
!!! TTTTTTTTTTTTTATTGATT+TGG - chr2_4:20355541-20355560 Msa0320090:CDS 5.0%
CCTTATCTCCGACCAGTTTC+CGG - chr2_4:20354910-20354929 Msa0320090:CDS 50.0%
CGACGTGCATATGCCTGATA+TGG - chr2_4:20355452-20355471 Msa0320090:CDS 50.0%
! TTCAAAGCCTCGATTCGCAC+AGG + chr2_4:20355714-20355733 None:intergenic 50.0%
GCAAGAGCTCAAAGAAGAGG+AGG - chr2_4:20355868-20355887 Msa0320090:CDS 50.0%
! ACGTTTTCTCTAGTGAGCCC+AGG + chr2_4:20356322-20356341 None:intergenic 50.0%
!! GGCCGAGCTAGGCTTTAAAT+AGG + chr2_4:20356596-20356615 None:intergenic 50.0%
ATAGGCTTTCGGGCTTCATC+AGG - chr2_4:20357242-20357261 Msa0320090:CDS 50.0%
ATAGGCTCAATTTCGAGGCC+TGG + chr2_4:20357285-20357304 None:intergenic 50.0%
CCGTCATAGGCTCAATTTCG+AGG + chr2_4:20357290-20357309 None:intergenic 50.0%
CATGAGGGTGGAAATAGGCT+AGG + chr2_4:20357383-20357402 None:intergenic 50.0%
CTAGCCTATTTCCACCCTCA+TGG - chr2_4:20357381-20357400 Msa0320090:intron 50.0%
GGCTATCAAGTCACCGCTAT+TGG - chr2_4:20357410-20357429 Msa0320090:intron 50.0%
GTCCACTTATCAGTGTGAGG+GGG - chr2_4:20357456-20357475 Msa0320090:intron 50.0%
TGACTCTGGCGTACTCATGA+AGG + chr2_4:20357651-20357670 None:intergenic 50.0%
GAACTGGCCAGAAGCTGAAA+GGG + chr2_4:20357714-20357733 None:intergenic 50.0%
AGAACTGGCCAGAAGCTGAA+AGG + chr2_4:20357715-20357734 None:intergenic 50.0%
TTCAGCTTCTGGCCAGTTCT+CGG - chr2_4:20357715-20357734 Msa0320090:CDS 50.0%
CTAGACTTTGCACCGAGAAC+TGG + chr2_4:20357730-20357749 None:intergenic 50.0%
! AAGTCCTGCTGCTTGAAGCT+TGG + chr2_4:20357753-20357772 None:intergenic 50.0%
CACCAGTCTGCTCAATCCTT+TGG - chr2_4:20357899-20357918 Msa0320090:CDS 50.0%
TGCCAAAGGATTGAGCAGAC+TGG + chr2_4:20357904-20357923 None:intergenic 50.0%
TCGCATATTTGCGCTGCCAA+AGG + chr2_4:20357918-20357937 None:intergenic 50.0%
! AAGCCCTTGGTTGATGCAGA+TGG - chr2_4:20357961-20357980 Msa0320090:intron 50.0%
GAGCCATCTGCATCAACCAA+GGG + chr2_4:20357967-20357986 None:intergenic 50.0%
TGAGCCATCTGCATCAACCA+AGG + chr2_4:20357968-20357987 None:intergenic 50.0%
ATGGCTCAGTCTCAACCAAG+AGG - chr2_4:20357980-20357999 Msa0320090:intron 50.0%
TTCCCTCTTAGATGCACTCC+GGG - chr2_4:20358097-20358116 Msa0320090:CDS 50.0%
TACCCGGAGTGCATCTAAGA+GGG + chr2_4:20358102-20358121 None:intergenic 50.0%
ATACCCGGAGTGCATCTAAG+AGG + chr2_4:20358103-20358122 None:intergenic 50.0%
! CACGCCTTTTGTACTGCTAC+TGG + chr2_4:20358128-20358147 None:intergenic 50.0%
!!! GATCTCTCGCCGTCGATTTT+AGG - chr2_4:20358304-20358323 Msa0320090:intron 50.0%
CCACGATGGCCTAAAATCGA+CGG + chr2_4:20358316-20358335 None:intergenic 50.0%
CTGGTCGGAGATAAGGTTGC+CGG + chr2_4:20354906-20354925 None:intergenic 55.0%
CCGGAAACTGGTCGGAGATA+AGG + chr2_4:20354913-20354932 None:intergenic 55.0%
TATCTCCGACCAGTTTCCGG+CGG - chr2_4:20354913-20354932 Msa0320090:CDS 55.0%
TCTCATGTAGGGGTGGGAAC+AGG - chr2_4:20356539-20356558 Msa0320090:intron 55.0%
GCCTTTAAATAGGCCAGGCC+AGG - chr2_4:20357264-20357283 Msa0320090:CDS 55.0%
GCCTGGCCTGGCCTATTTAA+AGG + chr2_4:20357268-20357287 None:intergenic 55.0%
CCTGGCCTATTACCCGTCAT+AGG + chr2_4:20357303-20357322 None:intergenic 55.0%
!! CCTATGACGGGTAATAGGCC+AGG - chr2_4:20357300-20357319 Msa0320090:intron 55.0%
AGGGTGGAAATAGGCTAGGC+CGG + chr2_4:20357379-20357398 None:intergenic 55.0%
TGGCCCATGAGGGTGGAAAT+AGG + chr2_4:20357388-20357407 None:intergenic 55.0%
TGATAGCCAGTGGCCCATGA+GGG + chr2_4:20357398-20357417 None:intergenic 55.0%
! TTGATAGCCAGTGGCCCATG+AGG + chr2_4:20357399-20357418 None:intergenic 55.0%
! AGCGGTGACTTGATAGCCAG+TGG + chr2_4:20357408-20357427 None:intergenic 55.0%
! ATCTGGAGTGTGACTCGAGC+GGG + chr2_4:20357436-20357455 None:intergenic 55.0%
! CATCTGGAGTGTGACTCGAG+CGG + chr2_4:20357437-20357456 None:intergenic 55.0%
CACCCCCTCACACTGATAAG+TGG + chr2_4:20357461-20357480 None:intergenic 55.0%
CTAGCCAAGCTTCAAGCAGC+AGG - chr2_4:20357746-20357765 Msa0320090:CDS 55.0%
CTGCTGCAAAGAGAAGCCCT+TGG - chr2_4:20357948-20357967 Msa0320090:intron 55.0%
!!! CCGTCGATTTTAGGCCATCG+TGG - chr2_4:20358313-20358332 Msa0320090:intron 55.0%
! TTCTCGCAGCACAAAGGCGT+TGG - chr2_4:20358635-20358654 Msa0320090:CDS 55.0%
ATCTCCGACCAGTTTCCGGC+GGG - chr2_4:20354914-20354933 Msa0320090:CDS 60.0%
ACAAGTACACGGAGACCCGC+CGG + chr2_4:20354932-20354951 None:intergenic 60.0%
TAAACGAGCTGGGCCGAGCT+AGG + chr2_4:20356607-20356626 None:intergenic 60.0%
AGCTTAATAGGCCGGCCCGA+CGG + chr2_4:20356713-20356732 None:intergenic 60.0%
CTCAATTTCGAGGCCTGGCC+TGG + chr2_4:20357280-20357299 None:intergenic 60.0%
ACGGGTAATAGGCCAGGCTC+AGG - chr2_4:20357306-20357325 Msa0320090:intron 60.0%
! GGCTTTGTAAGGCCCAAGCC+TGG + chr2_4:20357352-20357371 None:intergenic 60.0%
GGCTTGGGCCTTACAAAGCC+CGG - chr2_4:20357352-20357371 Msa0320090:intron 60.0%
GGGTGGAAATAGGCTAGGCC+GGG + chr2_4:20357378-20357397 None:intergenic 60.0%
TTTCCACCCTCATGGGCCAC+TGG - chr2_4:20357389-20357408 Msa0320090:intron 60.0%
TGACTCGAGCGGGCCAATAG+CGG + chr2_4:20357426-20357445 None:intergenic 60.0%
GAGACCCGCCGGAAACTGGT+CGG + chr2_4:20354921-20354940 None:intergenic 65.0%
TGTAGGGGTGGGAACAGGCC+AGG - chr2_4:20356544-20356563 Msa0320090:intron 65.0%
GCTAGGCCATAGGCCCCTGT+CGG + chr2_4:20356574-20356593 None:intergenic 65.0%
GCCTATTAAGCCCGTCGGGC+CGG - chr2_4:20356699-20356718 Msa0320090:intron 65.0%
GCTTAATAGGCCGGCCCGAC+GGG + chr2_4:20356712-20356731 None:intergenic 65.0%
GAAATAGGCTAGGCCGGGCC+GGG + chr2_4:20357373-20357392 None:intergenic 65.0%
GGAAATAGGCTAGGCCGGGC+CGG + chr2_4:20357374-20357393 None:intergenic 65.0%
TAGCCAGTGGCCCATGAGGG+TGG + chr2_4:20357395-20357414 None:intergenic 65.0%
CACGGAGACCCGCCGGAAAC+TGG + chr2_4:20354925-20354944 None:intergenic 70.0%
AACAGGCCAGGCCGTCCGAC+AGG - chr2_4:20356556-20356575 Msa0320090:intron 70.0%
ACAGGCCAGGCCGTCCGACA+GGG - chr2_4:20356557-20356576 Msa0320090:intron 70.0%
GGCCATAGGCCCCTGTCGGA+CGG + chr2_4:20356570-20356589 None:intergenic 70.0%
! GCCGGCCCGACGGGCTTAAT+AGG + chr2_4:20356703-20356722 None:intergenic 70.0%
GGGCCTTACAAAGCCCGGCC+CGG - chr2_4:20357357-20357376 Msa0320090:intron 70.0%
! AGGCCGGGCCGGGCTTTGTA+AGG + chr2_4:20357363-20357382 None:intergenic 70.0%
CAGGCCAGGCCGTCCGACAG+GGG - chr2_4:20356558-20356577 Msa0320090:intron 75.0%
TAGGCCCCTGTCGGACGGCC+TGG + chr2_4:20356565-20356584 None:intergenic 75.0%
GGCCGTCCGACAGGGGCCTA+TGG - chr2_4:20356565-20356584 Msa0320090:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 20354640 20358946 20354640 ID=Msa0320090;Name=Msa0320090
chr2_4 mRNA 20354640 20358946 20354640 ID=Msa0320090-mRNA-1;Parent=Msa0320090;Name=Msa0320090-mRNA-1;_AED=0.04;_eAED=0.04;_QI=205|1|1|1|0.83|0.71|7|196|606
chr2_4 exon 20354640 20354671 20354640 ID=Msa0320090-mRNA-1:exon:7518;Parent=Msa0320090-mRNA-1
chr2_4 exon 20354692 20354942 20354692 ID=Msa0320090-mRNA-1:exon:7517;Parent=Msa0320090-mRNA-1
chr2_4 exon 20355046 20356002 20355046 ID=Msa0320090-mRNA-1:exon:7516;Parent=Msa0320090-mRNA-1
chr2_4 exon 20357229 20357305 20357229 ID=Msa0320090-mRNA-1:exon:7515;Parent=Msa0320090-mRNA-1
chr2_4 exon 20357575 20357949 20357575 ID=Msa0320090-mRNA-1:exon:7514;Parent=Msa0320090-mRNA-1
chr2_4 exon 20358058 20358210 20358058 ID=Msa0320090-mRNA-1:exon:7513;Parent=Msa0320090-mRNA-1
chr2_4 exon 20358570 20358946 20358570 ID=Msa0320090-mRNA-1:exon:7512;Parent=Msa0320090-mRNA-1
chr2_4 five_prime_UTR 20358742 20358946 20358742 ID=Msa0320090-mRNA-1:five_prime_utr;Parent=Msa0320090-mRNA-1
chr2_4 CDS 20358570 20358741 20358570 ID=Msa0320090-mRNA-1:cds;Parent=Msa0320090-mRNA-1
chr2_4 CDS 20358058 20358210 20358058 ID=Msa0320090-mRNA-1:cds;Parent=Msa0320090-mRNA-1
chr2_4 CDS 20357575 20357949 20357575 ID=Msa0320090-mRNA-1:cds;Parent=Msa0320090-mRNA-1
chr2_4 CDS 20357229 20357305 20357229 ID=Msa0320090-mRNA-1:cds;Parent=Msa0320090-mRNA-1
chr2_4 CDS 20355046 20356002 20355046 ID=Msa0320090-mRNA-1:cds;Parent=Msa0320090-mRNA-1
chr2_4 CDS 20354856 20354942 20354856 ID=Msa0320090-mRNA-1:cds;Parent=Msa0320090-mRNA-1
chr2_4 three_prime_UTR 20354692 20354855 20354692 ID=Msa0320090-mRNA-1:three_prime_utr;Parent=Msa0320090-mRNA-1
chr2_4 three_prime_UTR 20354640 20354671 20354640 ID=Msa0320090-mRNA-1:three_prime_utr;Parent=Msa0320090-mRNA-1
Gene Sequence

>Msa0320090

ATGAAACTCAACAACAACAACAAAATTTCCATGTCAACCTCAACTTCACCATCAAACTCCGGCAACCTTATCTCCGACCAGTTTCCGGCGGGTCTCCGTGTACTTGTTGTTGATGATGACCCTACTTGCCTCATGATCCTTGAAAGAATGCTCCGTTTTTGCCTCTATGAAGTTACCAAATGCAAGAGAGCTGAGGTTGCATTATCACTTCTTAGAGAGAATAAAAACGGGTTCGACATTGTTTTAAGCGACGTGCATATGCCTGATATGGATGGATTCAAACTTTTGGAACATATTGGATTGGAGATGGATCTTCCTGTTATTATGATGTCGGCTGATGATGGAAAAAACGTGGTAATGAAAGGTGTGACACACGGTGCTTGTGATTATCTAATCAAACCTGTGCGAATCGAGGCTTTGAAGAATATATGGCAGCATGTGGTTCGGAAGAGAAAGAATAACTGGAAAGATCTGAAGCAATCTGGTGGATTAGATGAAAGAGATCGAGAAAAAATTGTGTCCACTGATGCTAATTACTCATCTTCAACGAATGAAGGCAAGAGCTCAAAGAAGAGGAGGGATGAAGAAGATGAAGCAGATGATAGGGATGATTGTTCGACGTCAAAGAAGCCTCGAGTTGTTTGGTCTATTGAGCTTCATCAACAGTTTATGGCTGTTGTGAATCAATTGGGATTAGACAAGGCTGTTCCTAAAAAGATTATGGAAATGATGAATGTTCCTGGGCTCACTAGAGAAAACGTTGCCAGTCATCTTCAGAAATACCGTTTGTATCTTCGAAGGTTGAGTGGAGTTTCCCAGCAGCAAAGTAACTTGAATAACTCCTTCATGAGTACGCCAGAGTCAATATTTGGAGGAACCTCCGTAAATGAAATTGATCTTCAAACCCTTTCAGCTTCTGGCCAGTTCTCGGTGCAAAGTCTAGCCAAGCTTCAAGCAGCAGGACTTTACAGTCCTGAGAACTCAAAACTAAGATTTGGAGATGGGCAACTGCAACATATGAGCAGCAGTAAACCGGTGAACTTTCTTCACGGAATCCCTATCAACATTGAGCCAAAGCAGTTTGCCAATTTTCACCAGTCTGCTCAATCCTTTGGCAGCGCAAATATGCGAGTCAATGCTTCTGCTGCAAAGAGAAGCCCTTGGTTGATGCAGATGGCTCAGTCTCAACCAAGAGGTCAGATGCTAAATGAGAATACAAATTCTCATGCTACAAGGTTTCCATCATCTTTAATGCAACCTACAGGACCAAATGGAATATCAGTCAATAGTTTCCCTCTTAGATGCACTCCGGGTATATCCAGTAGCAGTACAAAAGGCGTGTTTTATGCGGAAGCTACTTCGGGAATTAAAGGATTAGGGGGATTTAGTTATGATGTTTATAATGAACTCCATCAAAAGTCCAATGATTGGGGATTAGCAAATACAGGCCTGACATATGATGCTTCTCAACATGCAAATCCTTTACAAGGCAACATTGATCTCTCGCCGTCGATTTTAGGCCATCGTGGTTTTTCCTCTATCCAACAGACTCGACAAAATAGAGATGGTATGAGTCAAGGTGATCACCATAATGTTGGTCAACACCTCAATACACCTTTTGTCGACAATTCATTAAGGGGTAAGAGTGAAAGAATTCCGAGTACAAACATTGAGATCAACCCCTTCTCTGATCAAGTCAGTCAAGAGGATCTCATGAGCGTATTTCTGAACCAGCACAAAGGCGTTGGACAAGTTGATAATGAGTTTGACTTAGATGGATATTCCGCAGACAACATTCCAGTTTATAACAGATCCTGTTAG
Protein sequence

>Msa0320090

MKLNNNNKISMSTSTSPSNSGNLISDQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNNWKDLKQSGGLDERDREKIVSTDANYSSSTNEGKSSKKRRDEEDEADDRDDCSTSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVASHLQKYRLYLRRLSGVSQQQSNLNNSFMSTPESIFGGTSVNEIDLQTLSASGQFSVQSLAKLQAAGLYSPENSKLRFGDGQLQHMSSSKPVNFLHGIPINIEPKQFANFHQSAQSFGSANMRVNASAAKRSPWLMQMAQSQPRGQMLNENTNSHATRFPSSLMQPTGPNGISVNSFPLRCTPGISSSSTKGVFYAEATSGIKGLGGFSYDVYNELHQKSNDWGLANTGLTYDASQHANPLQGNIDLSPSILGHRGFSSIQQTRQNRDGMSQGDHHNVGQHLNTPFVDNSLRGKSERIPSTNIEINPFSDQVSQEDLMSVFLNQHKGVGQVDNEFDLDGYSADNIPVYNRSC*