AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1173990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1173990 MtrunA17_Chr2g0294911 95.717 607 24 2 1 606 1 606 0.0 1170
Msa1173990 MtrunA17_Chr4g0067981 62.225 683 172 13 1 601 2 680 0.0 767
Msa1173990 MtrunA17_Chr1g0161431 59.091 308 117 3 25 325 8 313 4.12e-115 356
Msa1173990 MtrunA17_Chr3g0137101 48.588 354 157 8 26 356 6 357 2.81e-101 321
Msa1173990 MtrunA17_Chr3g0123131 58.462 260 92 3 28 277 13 266 3.90e-95 303
Msa1173990 MtrunA17_Chr8g0376881 57.874 254 105 1 26 277 23 276 2.14e-92 295
Msa1173990 MtrunA17_Chr1g0149841 44.444 378 174 9 24 385 1 358 1.13e-91 291
Msa1173990 MtrunA17_Chr7g0275891 49.827 289 120 5 24 291 1 285 1.13e-84 268
Msa1173990 MtrunA17_Chr2g0304841 53.307 257 107 1 24 267 14 270 2.88e-83 275
Msa1173990 MtrunA17_Chr4g0074401 42.703 370 172 6 17 368 6 353 1.47e-81 268
Msa1173990 MtrunA17_Chr1g0149851 52.045 269 110 3 24 273 1 269 1.93e-79 261
Msa1173990 MtrunA17_Chr4g0074411 44.706 340 149 8 22 346 12 327 1.57e-77 257
Msa1173990 MtrunA17_Chr7g0275401 47.751 289 139 4 24 303 1 286 5.80e-75 241
Msa1173990 MtrunA17_Chr4g0074421 51.515 198 73 3 78 264 2 187 3.54e-59 196
Msa1173990 MtrunA17_Chr3g0134461 47.034 236 76 2 25 259 5 192 6.30e-59 195
Msa1173990 MtrunA17_Chr3g0134481 43.882 237 75 2 25 261 5 183 8.15e-57 189
Msa1173990 MtrunA17_Chr4g0009851 43.096 239 112 5 28 266 11 225 1.89e-56 193
Msa1173990 MtrunA17_Chr1g0149831 50.739 203 79 4 87 278 1 193 4.10e-56 189
Msa1173990 MtrunA17_Chr4g0009901 42.917 240 113 4 28 267 10 225 2.50e-55 189
Msa1173990 MtrunA17_Chr6g0471041 38.843 242 120 6 27 266 13 228 4.35e-45 165
Msa1173990 MtrunA17_Chr4g0009981 41.753 194 90 1 73 266 2 172 2.55e-44 158
Msa1173990 MtrunA17_Chr8g0391911 34.766 256 141 6 28 269 9 252 1.90e-35 134
Msa1173990 MtrunA17_Chr6g0473731 38.000 200 89 7 108 298 10 183 2.00e-29 121
Msa1173990 MtrunA17_Chr8g0383961 42.754 138 76 1 27 164 13 147 1.37e-28 115
Msa1173990 MtrunA17_Chr8g0350761 30.000 270 165 6 30 277 19 286 1.13e-27 116
Msa1173990 MtrunA17_Chr4g0011071 35.220 159 80 3 78 236 39 174 4.07e-27 108
Msa1173990 MtrunA17_Chr4g0031961 50.909 110 45 3 186 286 99 208 2.82e-24 103
Msa1173990 MtrunA17_Chr4g0009991 39.286 140 61 2 120 259 1 116 7.38e-23 94.4
Msa1173990 MtrunA17_Chr6g0456631 36.220 127 78 2 26 150 7 132 1.26e-21 92.4
Msa1173990 MtrunA17_Chr7g0276361 38.971 136 74 2 29 158 11 143 1.61e-21 99.0
Msa1173990 MtrunA17_Chr4g0030271 35.333 150 91 3 6 150 62 210 4.05e-21 98.2
Msa1173990 MtrunA17_Chr3g0127941 27.273 407 255 13 32 411 56 448 4.07e-21 97.8
Msa1173990 MtrunA17_Chr7g0255711 57.971 69 29 0 203 271 84 152 4.11e-21 94.4
Msa1173990 MtrunA17_Chr1g0181811 39.344 122 71 1 32 150 85 206 1.13e-20 96.7
Msa1173990 MtrunA17_Chr3g0091641 35.971 139 84 2 19 152 9 147 1.84e-20 95.5
Msa1173990 MtrunA17_Chr4g0061021 35.507 138 84 2 18 152 21 156 6.52e-19 90.5
Msa1173990 MtrunA17_Chr8g0345901 39.344 122 67 3 34 150 38 157 9.97e-19 90.1
Msa1173990 MtrunA17_Chr5g0400241 37.903 124 68 2 145 268 255 369 6.81e-17 84.0
Msa1173990 MtrunA17_Chr5g0400241 37.008 127 76 2 28 153 14 137 6.75e-14 74.7
Msa1173990 MtrunA17_Chr1g0198601 37.692 130 74 4 198 325 199 323 4.79e-16 80.5
Msa1173990 MtrunA17_Chr5g0423031 45.679 81 43 1 28 108 10 89 6.12e-16 76.3
Msa1173990 MtrunA17_Chr4g0010001 44.444 81 44 1 28 108 10 89 7.62e-16 73.2
Msa1173990 MtrunA17_Chr5g0417521 55.714 70 24 2 206 274 11 74 4.93e-15 77.0
Msa1173990 MtrunA17_Chr4g0054981 47.887 71 37 0 209 279 309 379 8.05e-15 77.8
Msa1173990 MtrunA17_Chr4g0054981 36.220 127 77 2 28 153 14 137 1.67e-13 73.6
Msa1173990 MtrunA17_Chr4g0040481 41.379 87 46 1 209 295 157 238 8.30e-15 77.0
Msa1173990 MtrunA17_Chr6g0469321 63.462 52 19 0 227 278 71 122 3.76e-14 70.9
Msa1173990 MtrunA17_Chr4g0042451 55.932 59 25 1 206 263 13 71 7.74e-14 73.2
Msa1173990 MtrunA17_Chr2g0324891 53.333 60 28 0 209 268 160 219 7.84e-14 73.9
Msa1173990 MtrunA17_Chr2g0321461 55.932 59 25 1 206 263 41 99 8.87e-14 73.6
Msa1173990 MtrunA17_Chr6g0461641 51.667 60 28 1 205 263 37 96 2.08e-13 72.4
Msa1173990 MtrunA17_Chr5g0422621 30.220 182 115 5 151 325 133 309 4.23e-13 71.2
Msa1173990 MtrunA17_Chr5g0402631 50.000 72 35 1 207 277 211 282 7.51e-13 70.1
Msa1173990 MtrunA17_Chr2g0310011 54.237 59 26 1 206 263 31 89 2.54e-12 68.6
Msa1173990 MtrunA17_Chr4g0045361 50.746 67 32 1 207 272 271 337 2.75e-12 68.9
Msa1173990 MtrunA17_Chr8g0356501 54.237 59 26 1 206 263 33 91 3.06e-12 68.6
Msa1173990 MtrunA17_Chr1g0197171 52.308 65 27 2 203 263 34 98 8.78e-12 66.2
Msa1173990 MtrunA17_Chr7g0274471 59.259 54 21 1 210 262 218 271 1.22e-11 67.0
Msa1173990 MtrunA17_Chr4g0062921 36.283 113 66 3 166 273 188 299 1.80e-11 66.6
Msa1173990 MtrunA17_Chr7g0261911 49.206 63 31 1 206 267 258 320 2.16e-11 66.6
Msa1173990 MtrunA17_Chr1g0190301 50.847 59 28 1 205 262 170 228 5.82e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1173990 AT3G16857.2 46.834 679 249 19 21 601 26 690 3.66e-175 513
Msa1173990 AT3G16857.1 46.341 656 241 18 21 578 26 668 7.27e-165 486
Msa1173990 AT3G16857.3 44.322 634 241 19 66 601 1 620 2.43e-144 432
Msa1173990 AT2G25180.1 59.924 262 93 3 26 281 11 266 9.92e-96 305
Msa1173990 AT2G01760.1 45.263 380 162 8 24 373 3 366 2.95e-95 297
Msa1173990 AT2G01760.2 42.157 408 162 9 24 373 3 394 5.67e-89 282
Msa1173990 AT4G31920.1 53.903 269 97 3 24 283 9 259 7.44e-87 281
Msa1173990 AT1G67710.1 49.702 336 128 9 29 333 8 333 1.16e-85 277
Msa1173990 AT5G58080.1 46.875 320 128 7 26 324 12 310 2.27e-78 261
Msa1173990 AT2G01760.3 42.271 317 137 9 87 373 1 301 1.05e-61 207
Msa1173990 AT1G67710.2 45.683 278 110 9 87 333 1 268 2.60e-56 197
Msa1173990 AT5G49240.1 42.915 247 134 3 18 259 28 272 9.23e-54 185
Msa1173990 AT1G49190.1 36.364 275 134 6 27 277 29 286 8.18e-46 167
Msa1173990 AT3G62670.1 39.407 236 128 5 33 262 42 268 1.92e-45 167
Msa1173990 AT1G67710.3 41.473 258 110 9 107 333 12 259 2.05e-40 153
Msa1173990 AT5G07210.2 33.955 268 145 6 32 269 16 281 7.50e-39 151
Msa1173990 AT5G07210.1 32.971 276 145 7 32 269 16 289 3.14e-36 144
Msa1173990 AT2G27070.1 32.103 271 147 7 32 268 16 283 3.79e-33 134
Msa1173990 AT1G49190.2 44.800 125 69 0 27 151 29 153 2.80e-29 123
Msa1173990 AT5G59570.2 52.083 96 43 1 194 286 125 220 3.99e-25 106
Msa1173990 AT5G59570.1 52.083 96 43 1 194 286 125 220 3.99e-25 106
Msa1173990 AT3G46640.2 51.064 94 45 1 194 286 128 221 1.85e-23 102
Msa1173990 AT3G46640.1 51.064 94 45 1 194 286 128 221 1.85e-23 102
Msa1173990 AT3G46640.3 51.064 94 45 1 194 286 128 221 2.77e-23 101
Msa1173990 AT2G46790.1 40.650 123 68 2 32 150 37 158 5.54e-23 102
Msa1173990 AT2G46790.3 40.650 123 68 2 32 150 37 158 5.84e-23 102
Msa1173990 AT5G24470.1 39.200 125 71 2 31 151 49 172 5.43e-21 97.4
Msa1173990 AT5G60100.7 39.837 123 69 2 32 150 64 185 6.81e-21 95.9
Msa1173990 AT5G60100.6 39.837 123 69 2 32 150 64 185 6.81e-21 95.9
Msa1173990 AT5G60100.4 39.837 123 69 2 32 150 64 185 6.81e-21 95.9
Msa1173990 AT2G40970.1 60.606 66 26 0 203 268 98 163 8.90e-21 92.4
Msa1173990 AT5G60100.5 39.837 123 69 2 32 150 64 185 9.89e-21 96.3
Msa1173990 AT5G60100.3 39.837 123 69 2 32 150 64 185 9.89e-21 96.3
Msa1173990 AT5G60100.1 39.837 123 69 2 32 150 64 185 9.89e-21 96.3
Msa1173990 AT5G60100.2 39.837 123 69 2 32 150 64 185 1.96e-20 95.5
Msa1173990 AT5G05090.1 59.091 66 27 0 203 268 74 139 2.74e-20 91.7
Msa1173990 AT3G10760.1 59.091 66 27 0 203 268 98 163 4.40e-20 92.4
Msa1173990 AT5G61380.1 38.710 124 73 1 32 152 19 142 4.53e-20 94.7
Msa1173990 AT5G02810.1 40.164 122 70 1 32 150 78 199 6.27e-20 94.7
Msa1173990 AT5G44190.2 50.649 77 38 0 203 279 140 216 8.01e-18 85.9
Msa1173990 AT5G44190.1 50.649 77 38 0 203 279 140 216 1.12e-17 85.9
Msa1173990 AT2G20570.1 39.823 113 63 2 170 277 108 220 4.58e-16 81.3
Msa1173990 AT2G20570.2 38.060 134 77 2 145 277 108 236 2.11e-14 76.3
Msa1173990 AT3G04030.1 51.282 78 30 3 206 282 41 111 3.62e-14 75.1
Msa1173990 AT3G04030.3 51.282 78 30 3 206 282 41 111 4.42e-14 74.7
Msa1173990 AT5G18240.2 50.000 82 37 3 205 285 40 118 5.96e-14 74.3
Msa1173990 AT5G18240.3 50.000 82 37 3 205 285 40 118 5.96e-14 74.3
Msa1173990 AT5G18240.5 50.000 82 37 3 205 285 40 118 6.50e-14 74.3
Msa1173990 AT5G18240.1 50.000 82 37 3 205 285 40 118 7.00e-14 74.3
Msa1173990 AT5G18240.4 50.000 82 37 3 205 285 40 118 7.00e-14 74.3
Msa1173990 AT4G18020.8 36.029 136 78 3 26 154 12 145 4.85e-13 72.0
Msa1173990 AT4G18020.8 51.613 62 29 1 207 268 294 354 6.59e-13 71.6
Msa1173990 AT4G18020.11 36.029 136 78 3 26 154 12 145 4.85e-13 72.0
Msa1173990 AT4G18020.11 51.613 62 29 1 207 268 294 354 6.59e-13 71.6
Msa1173990 AT4G18020.4 36.029 136 78 3 26 154 12 145 4.85e-13 72.0
Msa1173990 AT4G18020.4 51.613 62 29 1 207 268 294 354 6.59e-13 71.6
Msa1173990 AT4G18020.5 36.029 136 78 3 26 154 12 145 4.85e-13 72.0
Msa1173990 AT4G18020.5 51.613 62 29 1 207 268 294 354 6.59e-13 71.6
Msa1173990 AT4G18020.10 36.029 136 78 3 26 154 12 145 4.85e-13 72.0
Msa1173990 AT4G18020.10 51.613 62 29 1 207 268 294 354 6.59e-13 71.6
Msa1173990 AT4G18020.7 36.029 136 78 3 26 154 12 145 4.85e-13 72.0
Msa1173990 AT4G18020.7 51.613 62 29 1 207 268 294 354 6.59e-13 71.6
Msa1173990 AT3G04030.2 48.052 77 33 2 206 282 41 110 5.16e-13 71.6
Msa1173990 AT4G18020.3 36.029 136 78 3 26 154 12 145 6.97e-13 72.0
Msa1173990 AT4G18020.3 51.613 62 29 1 207 268 294 354 7.34e-13 71.6
Msa1173990 AT4G18020.2 36.029 136 78 3 26 154 12 145 6.97e-13 72.0
Msa1173990 AT4G18020.2 51.613 62 29 1 207 268 294 354 7.34e-13 71.6
Msa1173990 AT4G18020.1 36.029 136 78 3 26 154 12 145 6.97e-13 72.0
Msa1173990 AT4G18020.1 51.613 62 29 1 207 268 294 354 7.34e-13 71.6
Msa1173990 AT4G18020.6 36.029 136 78 3 26 154 12 145 6.97e-13 72.0
Msa1173990 AT4G18020.6 51.613 62 29 1 207 268 294 354 7.34e-13 71.6
Msa1173990 AT4G18020.9 36.029 136 78 3 26 154 12 145 6.97e-13 72.0
Msa1173990 AT4G18020.9 51.613 62 29 1 207 268 294 354 7.34e-13 71.6
Msa1173990 AT1G69580.2 54.237 59 26 1 206 263 30 88 8.06e-13 70.5
Msa1173990 AT1G69580.1 54.237 59 26 1 206 263 30 88 8.14e-13 70.5
Msa1173990 AT3G24120.1 52.308 65 27 2 203 263 31 95 3.32e-12 68.2
Msa1173990 AT3G24120.2 52.308 65 27 2 203 263 31 95 3.46e-12 68.2
Msa1173990 AT1G79430.2 53.333 60 27 1 205 263 29 88 3.76e-12 68.6
Msa1173990 AT3G25790.1 38.655 119 61 4 214 330 200 308 7.67e-12 67.8
Msa1173990 AT4G13640.1 52.308 65 27 2 203 263 27 91 7.71e-12 67.0
Msa1173990 AT4G13640.2 52.308 65 27 2 203 263 27 91 7.73e-12 67.0
Msa1173990 AT1G49560.1 36.283 113 64 2 209 313 191 303 2.51e-11 65.9
Msa1173990 AT3G12730.1 49.275 69 28 2 202 263 9 77 2.99e-11 64.3
Msa1173990 AT1G25550.1 45.070 71 38 1 198 267 197 267 3.59e-11 65.5
Msa1173990 AT1G68670.1 45.679 81 42 2 194 272 198 278 5.43e-11 65.1
Msa1173990 AT5G29000.4 45.714 70 35 2 196 262 215 284 6.00e-11 64.3
Msa1173990 AT2G03500.1 47.059 68 35 1 207 273 230 297 8.33e-11 65.1

Find 141 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGCTTCATCAACAGTTTA+TGG 0.134096 8_1:-5002882 Msa1173990:CDS
CTTCAAACCCTTTCAGCTTC+TGG 0.197138 8_1:-5001140 Msa1173990:CDS
CCTTATCTCCGACCAGTTTC+CGG 0.220153 8_1:-5003933 Msa1173990:CDS
GTTGTTGTTGTTGAGTTTCA+TGG 0.237423 8_1:+5004000 None:intergenic
GAAGCTACTTCGGGAATTAA+AGG 0.286940 8_1:-5000687 Msa1173990:CDS
TATGGATGGATTCAAACTTT+TGG 0.295920 8_1:-5003373 Msa1173990:CDS
ATTAAACTAAGAAAATTAAT+TGG 0.296217 8_1:+5004132 None:intergenic
GATAATGAGTTTGACTTAGA+TGG 0.303961 8_1:-5000178 Msa1173990:CDS
TGCAAGTTACAACTGTTATA+AGG 0.306416 8_1:-5004190 Msa1173990:five_prime_UTR
AGTACGCCAGAGTCAATATT+TGG 0.308653 8_1:-5001188 Msa1173990:CDS
CACCAGTCTGCTCAATCCTT+TGG 0.321223 8_1:-5000945 Msa1173990:CDS
TTGAAGATCAATTTCATTTA+CGG 0.326626 8_1:+5001157 None:intergenic
GAGAACTCAAAACTAAGATT+TGG 0.328580 8_1:-5001062 Msa1173990:CDS
TTCAGCTTCTGGCCAGTTCT+CGG 0.333161 8_1:-5001129 Msa1173990:CDS
ACTTCGGGAATTAAAGGATT+AGG 0.335057 8_1:-5000681 Msa1173990:CDS
AAGAAGATGAAGCAGATGAT+AGG 0.337750 8_1:-5002949 Msa1173990:CDS
AAGAAAATTAATTGGTTTGT+GGG 0.341269 8_1:+5004140 None:intergenic
TGCTTTGGCTCAATGTTGAT+AGG 0.342601 8_1:+5000981 None:intergenic
TTGAGCAGACTGGTGAAAAT+TGG 0.352834 8_1:+5000953 None:intergenic
TGAGGTGTTGACCAACATTA+TGG 0.359965 8_1:+5000451 None:intergenic
TGAAAATTGGCAAACTGCTT+TGG 0.368522 8_1:+5000966 None:intergenic
CGACGTGCATATGCCTGATA+TGG 0.368808 8_1:-5003391 Msa1173990:CDS
TCGAGGCTTTGAAGAATATA+TGG 0.369544 8_1:-5003123 Msa1173990:CDS
CTTCGGGAATTAAAGGATTA+GGG 0.371380 8_1:-5000680 Msa1173990:CDS
CTATTGACTGATATTCCATT+TGG 0.387671 8_1:+5000771 None:intergenic
CACGGAGACCCGCCGGAAAC+TGG 0.388410 8_1:+5003921 None:intergenic
TAAGAAAATTAATTGGTTTG+TGG 0.396703 8_1:+5004139 None:intergenic
TTCGGAAGAGAAAGAATAAC+TGG 0.397525 8_1:-5003090 Msa1173990:CDS
TCATTTAGCATCTGACCTCT+TGG 0.399993 8_1:+5000849 None:intergenic
CTAGACTTTGCACCGAGAAC+TGG 0.401730 8_1:+5001117 None:intergenic
AAACGTTGCCAGTCATCTTC+AGG 0.402049 8_1:-5002508 Msa1173990:intron
TAACAGGATCTGTTATAAAC+TGG 0.403457 8_1:+5000136 None:intergenic
AACCTCAGCTCTCTTGCATT+TGG 0.403620 8_1:+5003464 None:intergenic
CCATCAAAAGTCCAATGATT+GGG 0.406485 8_1:-5000628 Msa1173990:CDS
ATTTGCTAATCCCCAATCAT+TGG 0.406561 8_1:+5000617 None:intergenic
CAAAGAAGCCTCGAGTTGTT+TGG 0.412556 8_1:-5002910 Msa1173990:CDS
TATTCAAGTTACTTTGCTGC+TGG 0.418842 8_1:+5001222 None:intergenic
ATGGAAATGATGAATGTTCC+TGG 0.426157 8_1:-5002543 Msa1173990:CDS
AGTTTGAATCCATCCATATC+AGG 0.428415 8_1:+5003378 None:intergenic
TCCATCAAAAGTCCAATGAT+TGG 0.430749 8_1:-5000629 Msa1173990:CDS
ATAAGGTTGCCGGAGTTTGA+TGG 0.460200 8_1:+5003950 None:intergenic
TATGGCTGTTGTGAATCAAT+TGG 0.460490 8_1:-5002864 Msa1173990:CDS
TGATTAGAAAGAGAGCTAAC+AGG 0.464856 8_1:+5000120 None:intergenic
TGGAAAGATCTGAAGCAATC+TGG 0.465336 8_1:-5003070 Msa1173990:CDS
TTCTCGCAGCACAAAGGCGT+TGG 0.468445 8_1:-5000208 Msa1173990:intron
CCGGAAACTGGTCGGAGATA+AGG 0.470882 8_1:+5003933 None:intergenic
TTGTCGAGTCTGTTGGATAG+AGG 0.472904 8_1:+5000503 None:intergenic
ATGGCTGTTGTGAATCAATT+GGG 0.473696 8_1:-5002863 Msa1173990:CDS
ATGCAACCTACAGGACCAAA+TGG 0.473881 8_1:-5000786 Msa1173990:CDS
ACATATGAGCAGCAGTAAAC+CGG 0.474063 8_1:-5001024 Msa1173990:CDS
CTTAATGAATTGTCGACAAA+AGG 0.475530 8_1:+5000423 None:intergenic
CTAGCCAAGCTTCAAGCAGC+AGG 0.477941 8_1:-5001098 Msa1173990:CDS
GGAACATATTGGATTGGAGA+TGG 0.480393 8_1:-5003352 Msa1173990:CDS
AGAAGATGAAGCAGATGATA+GGG 0.481453 8_1:-5002948 Msa1173990:CDS
AGATCAATGTTGCCTTGTAA+AGG 0.489412 8_1:+5000558 None:intergenic
TTCCCTCTTAGATGCACTCC+GGG 0.489466 8_1:-5000747 Msa1173990:CDS
GTAGGTTGCATTAAAGATGA+TGG 0.494028 8_1:+5000798 None:intergenic
CAACATGCAAATCCTTTACA+AGG 0.495519 8_1:-5000570 Msa1173990:CDS
TACTCATCTTCAACGAATGA+AGG 0.499328 8_1:-5002998 Msa1173990:CDS
GATATTCCATTTGGTCCTGT+AGG 0.499380 8_1:+5000780 None:intergenic
GCTTTGGCTCAATGTTGATA+GGG 0.500235 8_1:+5000982 None:intergenic
CAAAACTAAGATTTGGAGAT+GGG 0.507173 8_1:-5001055 Msa1173990:CDS
CAAGGATCATGAGGCAAGTA+GGG 0.508406 8_1:+5003879 None:intergenic
CTGGTCGGAGATAAGGTTGC+CGG 0.509887 8_1:+5003940 None:intergenic
ATTCAAGTTACTTTGCTGCT+GGG 0.515195 8_1:+5001223 None:intergenic
GTTGAGAAGCATCATATGTC+AGG 0.515544 8_1:+5000589 None:intergenic
CATGAGCGTATTTCTGAACC+AGG 0.515894 8_1:-5000325 Msa1173990:intron
GATTGGGGATTAGCAAATAC+AGG 0.520281 8_1:-5000612 Msa1173990:CDS
TTCAAAGCCTCGATTCGCAC+AGG 0.523205 8_1:+5003133 None:intergenic
ATATATGGCAGCATGTGGTT+CGG 0.524503 8_1:-5003108 Msa1173990:CDS
TCAAGGATCATGAGGCAAGT+AGG 0.525643 8_1:+5003878 None:intergenic
ATATCCAGTAGCAGTACAAA+AGG 0.527621 8_1:-5000723 Msa1173990:CDS
TGACTGACTTGATCAGAGAA+GGG 0.534175 8_1:+5000357 None:intergenic
AAACCGGTGAACTTTCTTCA+CGG 0.535622 8_1:-5001008 Msa1173990:CDS
ATACAAATTCTCATGCTACA+AGG 0.536556 8_1:-5000824 Msa1173990:CDS
TCAAAACTAAGATTTGGAGA+TGG 0.536886 8_1:-5001056 Msa1173990:CDS
TTGACTGACTTGATCAGAGA+AGG 0.537467 8_1:+5000356 None:intergenic
TTGTATCTTCGAAGGTTGAG+TGG 0.537963 8_1:-5001251 Msa1173990:CDS
GAACTGGCCAGAAGCTGAAA+GGG 0.541735 8_1:+5001133 None:intergenic
ATCTCCGACCAGTTTCCGGC+GGG 0.544362 8_1:-5003929 Msa1173990:CDS
TCGCATATTTGCGCTGCCAA+AGG 0.548078 8_1:+5000929 None:intergenic
AATACCGTTTGTATCTTCGA+AGG 0.548651 8_1:-5001259 Msa1173990:CDS
AGAACTGGCCAGAAGCTGAA+AGG 0.554761 8_1:+5001132 None:intergenic
TCATCTTTAATGCAACCTAC+AGG 0.556863 8_1:-5000795 Msa1173990:CDS
TTAGTGATGTCGGCTGATGA+TGG 0.559693 8_1:-5003211 Msa1173990:intron
ATACCCGGAGTGCATCTAAG+AGG 0.561462 8_1:+5000744 None:intergenic
ATATCATACCTGAAGATGAC+TGG 0.562314 8_1:+5002500 None:intergenic
AAGCCCTTGGTTGATGCAGA+TGG 0.564484 8_1:-5000883 Msa1173990:CDS
TAGTTGCCAATGTAAATAGT+TGG 0.567960 8_1:-5000097 Msa1173990:three_prime_UTR
GGAACACCAACTATTTACAT+TGG 0.570285 8_1:+5000091 None:intergenic
CTCTGATCAAGTCAGTCAAG+AGG 0.573459 8_1:-5000352 Msa1173990:CDS
TTGATCTCAATGTTTGTACT+CGG 0.576687 8_1:+5000381 None:intergenic
ATTCCGTGAAGAAAGTTCAC+CGG 0.576781 8_1:+5001005 None:intergenic
GTTCCTCCAAATATTGACTC+TGG 0.578483 8_1:+5001182 None:intergenic
TGCCAAAGGATTGAGCAGAC+TGG 0.579512 8_1:+5000943 None:intergenic
TTTCCCTCTTAGATGCACTC+CGG 0.583189 8_1:-5000748 Msa1173990:CDS
TTTGTCGACAATTCATTAAG+GGG 0.583507 8_1:-5000420 Msa1173990:CDS
TGACTCTGGCGTACTCATGA+AGG 0.583909 8_1:+5001196 None:intergenic
GCAAGAGCTCAAAGAAGAGG+AGG 0.587165 8_1:-5002976 Msa1173990:CDS
GACTGACTTGATCAGAGAAG+GGG 0.587939 8_1:+5000358 None:intergenic
ACAAGTACACGGAGACCCGC+CGG 0.589774 8_1:+5003914 None:intergenic
CAAGGTGATCACCATAATGT+TGG 0.591086 8_1:-5000462 Msa1173990:CDS
AAGTCCTGCTGCTTGAAGCT+TGG 0.592461 8_1:+5001094 None:intergenic
TGTCGACAAAAGGTGTATTG+AGG 0.593503 8_1:+5000433 None:intergenic
AGATGAGTAATTAGCATCAG+TGG 0.594629 8_1:+5003012 None:intergenic
CTGCTGCAAAGAGAAGCCCT+TGG 0.595593 8_1:-5000896 Msa1173990:CDS
TGGTGAAGTTGAGGTTGACA+TGG 0.599570 8_1:+5003970 None:intergenic
AAGATCAATTTCATTTACGG+AGG 0.607064 8_1:+5001160 None:intergenic
GAGCCATCTGCATCAACCAA+GGG 0.609724 8_1:+5000880 None:intergenic
TGAGCCATCTGCATCAACCA+AGG 0.610874 8_1:+5000879 None:intergenic
AATAGAGATGGTATGAGTCA+AGG 0.612883 8_1:-5000480 Msa1173990:CDS
TCAACCTTCGAAGATACAAA+CGG 0.613662 8_1:+5001255 None:intergenic
AATCAAACCTGTGCGAATCG+AGG 0.614923 8_1:-5003140 Msa1173990:CDS
TCAACTTCACCATCAAACTC+CGG 0.617812 8_1:-5003959 Msa1173990:CDS
TACCCGGAGTGCATCTAAGA+GGG 0.617885 8_1:+5000745 None:intergenic
CATCAAAAGTCCAATGATTG+GGG 0.619687 8_1:-5000627 Msa1173990:CDS
GTGCATATGCCTGATATGGA+TGG 0.621582 8_1:-5003387 Msa1173990:CDS
CAGACTCGACAAAATAGAGA+TGG 0.622886 8_1:-5000492 Msa1173990:CDS
AAGATTGAAGACCTTCATAG+AGG 0.625198 8_1:+5003837 None:intergenic
GCATTCTTTCAAGGATCATG+AGG 0.625199 8_1:+5003870 None:intergenic
TGGAAATGATGAATGTTCCT+GGG 0.628797 8_1:-5002542 Msa1173990:CDS
AAAGATCTGAAGCAATCTGG+TGG 0.628824 8_1:-5003067 Msa1173990:CDS
TATCTCCGACCAGTTTCCGG+CGG 0.629363 8_1:-5003930 Msa1173990:CDS
GAAGAATATATGGCAGCATG+TGG 0.629609 8_1:-5003113 Msa1173990:CDS
TTCGGGAATTAAAGGATTAG+GGG 0.632056 8_1:-5000679 Msa1173990:CDS
TTGTATTTCTCGCAGCACAA+AGG 0.634173 8_1:-5000214 Msa1173990:intron
CCACGATGGCCTAAAATCGA+CGG 0.634519 8_1:+5000531 None:intergenic
AAGGCAAGAGCTCAAAGAAG+AGG 0.635070 8_1:-5002979 Msa1173990:CDS
TCGGGAATTAAAGGATTAGG+GGG 0.636049 8_1:-5000678 Msa1173990:CDS
ACGCCAGAGTCAATATTTGG+AGG 0.638077 8_1:-5001185 Msa1173990:CDS
TCAATAGACCAAACAACTCG+AGG 0.639848 8_1:+5002902 None:intergenic
GGAGTTTGATGGTGAAGTTG+AGG 0.651951 8_1:+5003961 None:intergenic
CATCATCAACAACAAGTACA+CGG 0.653506 8_1:+5003903 None:intergenic
GAGACCCGCCGGAAACTGGT+CGG 0.661705 8_1:+5003925 None:intergenic
CAAGAGCTCAAAGAAGAGGA+GGG 0.663100 8_1:-5002975 Msa1173990:CDS
TACCAAATGCAAGAGAGCTG+AGG 0.664673 8_1:-5003466 Msa1173990:CDS
GAGTGATGATTAGATTCATG+TGG 0.665667 8_1:+5000070 None:intergenic
GTACTGCTACTGGATATACC+CGG 0.685345 8_1:+5000729 None:intergenic
ATGGCTCAGTCTCAACCAAG+AGG 0.702081 8_1:-5000864 Msa1173990:CDS
GTAATGAAAGGTGTGACACA+CGG 0.719143 8_1:-5003178 Msa1173990:CDS
ATAAACTGGAATGTTGTCTG+CGG 0.732217 8_1:+5000150 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAACTAAGAAAATTAAT+TGG + chr8_1:4999992-5000011 None:intergenic 10.0%
!! TCAGAACTAAAAATAAAAAT+GGG + chr8_1:5000443-5000462 None:intergenic 15.0%
!! ATCAGAACTAAAAATAAAAA+TGG + chr8_1:5000444-5000463 None:intergenic 15.0%
!!! AGAAATATTTAAGATTCTAT+GGG + chr8_1:5001460-5001479 None:intergenic 15.0%
!! TTTAACAATAACAAAAATAG+AGG + chr8_1:5001665-5001684 None:intergenic 15.0%
!! TAAAGCCTATTTAATTAAAT+AGG - chr8_1:5001931-5001950 Msa1173990:intron 15.0%
!! TTATACATAAAAAGCTTAAT+AGG + chr8_1:5002002-5002021 None:intergenic 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr8_1:5002132-5002151 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr8_1:5002259-5002278 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr8_1:5002258-5002277 Msa1173990:intron 15.0%
!! TAAATAATGAAATCTTACAA+AGG + chr8_1:5002398-5002417 None:intergenic 15.0%
!!! AATAAATGATTTGTCTATAA+AGG + chr8_1:5003871-5003890 None:intergenic 15.0%
!! TTAGTTTATGTAAAAATTTC+AGG - chr8_1:5004123-5004142 Msa1173990:five_prime_UTR 15.0%
!!! AAGAAAATTAATTGGTTTGT+GGG + chr8_1:4999984-5000003 None:intergenic 20.0%
!!! TAAGAAAATTAATTGGTTTG+TGG + chr8_1:4999985-5000004 None:intergenic 20.0%
!!! TTTTTTTGTTGTCTACTATT+TGG - chr8_1:5000089-5000108 Msa1173990:three_prime_UTR 20.0%
!!! TTTTAACACTAATTCATGAT+GGG + chr8_1:5000329-5000348 None:intergenic 20.0%
!!! TTTTTAACACTAATTCATGA+TGG + chr8_1:5000330-5000349 None:intergenic 20.0%
!! AAAAACTCAATCAAACAAAA+GGG + chr8_1:5000411-5000430 None:intergenic 20.0%
!! AAAAAACTCAATCAAACAAA+AGG + chr8_1:5000412-5000431 None:intergenic 20.0%
!!! TAAGTGTTTTTTTCAACTAT+TGG - chr8_1:5000532-5000551 Msa1173990:CDS 20.0%
!! AAAAAATGCTTACTAATAAC+AGG + chr8_1:5000800-5000819 None:intergenic 20.0%
!! ATATCTTGGAAAAACTTTAA+GGG + chr8_1:5001386-5001405 None:intergenic 20.0%
!! TATATCTTGGAAAAACTTTA+AGG + chr8_1:5001387-5001406 None:intergenic 20.0%
!!! AAATATTTAAGATTCTATGG+GGG + chr8_1:5001458-5001477 None:intergenic 20.0%
!!! GAAATATTTAAGATTCTATG+GGG + chr8_1:5001459-5001478 None:intergenic 20.0%
!!! CAGAAATATTTAAGATTCTA+TGG + chr8_1:5001461-5001480 None:intergenic 20.0%
!!! ATCATTTCCATAATCTTTTT+AGG + chr8_1:5001569-5001588 None:intergenic 20.0%
!! CTTCTAAACTAACTTATTAT+AGG + chr8_1:5001713-5001732 None:intergenic 20.0%
!!! ATAATAAGTTAGTTTAGAAG+TGG - chr8_1:5001713-5001732 Msa1173990:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr8_1:5002172-5002191 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr8_1:5002249-5002268 Msa1173990:intron 20.0%
!!! AGTAAAATAGGCTTTTAAAT+AGG - chr8_1:5002501-5002520 Msa1173990:intron 20.0%
!! TTGAAGATCAATTTCATTTA+CGG + chr8_1:5002967-5002986 None:intergenic 20.0%
!! TAAGGAAACATAGATATTTA+GGG + chr8_1:5003843-5003862 None:intergenic 20.0%
!! AGTGAAAAGTGATGATTTTA+TGG + chr8_1:5000033-5000052 None:intergenic 25.0%
! AGCATAATTCAAAAGAAAGA+TGG + chr8_1:5000479-5000498 None:intergenic 25.0%
!! GCTTTTGATATGATTTAGTA+TGG - chr8_1:5000496-5000515 Msa1173990:CDS 25.0%
!! AAAGTCTCAAACTTTAACTT+TGG + chr8_1:5000566-5000585 None:intergenic 25.0%
! CTTCTTAGAGAGAATAAAAA+CGG - chr8_1:5000689-5000708 Msa1173990:CDS 25.0%
! TTCTTAGAGAGAATAAAAAC+GGG - chr8_1:5000690-5000709 Msa1173990:CDS 25.0%
!!! TTCAAACTTTTGGAACATAT+TGG - chr8_1:5000758-5000777 Msa1173990:CDS 25.0%
! CAAGGACATAACATAATTAA+GGG + chr8_1:5001300-5001319 None:intergenic 25.0%
! AAATTGATATTGATATGCAG+AGG - chr8_1:5001538-5001557 Msa1173990:intron 25.0%
! CCTGACCTATTTAATTAAAT+AGG + chr8_1:5001939-5001958 None:intergenic 25.0%
! CCTATTTAATTAAATAGGTC+AGG - chr8_1:5001936-5001955 Msa1173990:intron 25.0%
! AACTTCAACGATATCAATAA+TGG + chr8_1:5002033-5002052 None:intergenic 25.0%
! CTAAATAACCAATCATATGA+AGG + chr8_1:5002075-5002094 None:intergenic 25.0%
!!! TTCAAAATGAGTGTCATTTT+AGG + chr8_1:5002340-5002359 None:intergenic 25.0%
!!! AAATGACACTCATTTTGAAA+CGG - chr8_1:5002341-5002360 Msa1173990:intron 25.0%
! ATGTAAGTCTACTACTAAAT+AGG + chr8_1:5002464-5002483 None:intergenic 25.0%
!! TTTTGTCGACAATTCATTAA+GGG - chr8_1:5003700-5003719 Msa1173990:intron 25.0%
! GTAAGGAAACATAGATATTT+AGG + chr8_1:5003844-5003863 None:intergenic 25.0%
! TTGTCTATAAAGGAAAAGTA+AGG + chr8_1:5003861-5003880 None:intergenic 25.0%
TGCAAGTTACAACTGTTATA+AGG - chr8_1:4999931-4999950 Msa1173990:three_prime_UTR 30.0%
! TTTGATTCTGTTTTGCTTGT+TGG - chr8_1:5000616-5000635 Msa1173990:CDS 30.0%
! TTGATTCTGTTTTGCTTGTT+GGG - chr8_1:5000617-5000636 Msa1173990:CDS 30.0%
!! TATGGATGGATTCAAACTTT+TGG - chr8_1:5000748-5000767 Msa1173990:CDS 30.0%
!!! ACTTTTGGAACATATTGGAT+TGG - chr8_1:5000763-5000782 Msa1173990:CDS 30.0%
!!! TGAATGTGTTTTAGTGATGT+CGG - chr8_1:5000900-5000919 Msa1173990:CDS 30.0%
GCAAGGACATAACATAATTA+AGG + chr8_1:5001301-5001320 None:intergenic 30.0%
! TGAAAGAGAACATTTTTGCA+AGG + chr8_1:5001318-5001337 None:intergenic 30.0%
!! TCATCTTTGTTTGTTTTCCA+CGG - chr8_1:5001335-5001354 Msa1173990:intron 30.0%
! TTGGAAAAACTTTAAGGGAA+TGG + chr8_1:5001381-5001400 None:intergenic 30.0%
GAATCACAAGGATTATATCT+TGG + chr8_1:5001400-5001419 None:intergenic 30.0%
AACAATCTTGTAGAATCACA+AGG + chr8_1:5001412-5001431 None:intergenic 30.0%
! ATAAGTTAGTTTAGAAGTGG+TGG - chr8_1:5001716-5001735 Msa1173990:intron 30.0%
!! TCGTACAAACTGATTTTGTA+AGG - chr8_1:5001749-5001768 Msa1173990:intron 30.0%
!! CGTACAAACTGATTTTGTAA+GGG - chr8_1:5001750-5001769 Msa1173990:intron 30.0%
CCTATATAAGATCTCATGTA+GGG - chr8_1:5001805-5001824 Msa1173990:intron 30.0%
CTATATAAGATCTCATGTAG+GGG - chr8_1:5001806-5001825 Msa1173990:intron 30.0%
TAATTAAATAGGTCAGGCTA+AGG - chr8_1:5001942-5001961 Msa1173990:intron 30.0%
ACATAAAAAGCTTAATAGGC+CGG + chr8_1:5001998-5002017 None:intergenic 30.0%
CACATATATTCATGTGCTTT+AGG - chr8_1:5002422-5002441 Msa1173990:intron 30.0%
AAATAGGCCAAAATTTACGA+AGG + chr8_1:5002448-5002467 None:intergenic 30.0%
!! GCTAGACTTTAGAGTAAAAT+AGG - chr8_1:5002489-5002508 Msa1173990:intron 30.0%
! TAGGCTTTTAAATAGGCTTT+CGG - chr8_1:5002508-5002527 Msa1173990:intron 30.0%
!!! AGGCCTATAATTTTTGAAGT+AGG - chr8_1:5002603-5002622 Msa1173990:intron 30.0%
TGGCCTACTTCAAAAATTAT+AGG + chr8_1:5002609-5002628 None:intergenic 30.0%
!!! TATAATTTTTGAAGTAGGCC+AGG - chr8_1:5002608-5002627 Msa1173990:intron 30.0%
ACTGTAACTCTTAACATTCA+AGG + chr8_1:5002781-5002800 None:intergenic 30.0%
AAGATCAATTTCATTTACGG+AGG + chr8_1:5002964-5002983 None:intergenic 30.0%
!!! AATCTTAGTTTTGAGTTCTC+AGG + chr8_1:5003059-5003078 None:intergenic 30.0%
GAGAACTCAAAACTAAGATT+TGG - chr8_1:5003059-5003078 Msa1173990:CDS 30.0%
TCAAAACTAAGATTTGGAGA+TGG - chr8_1:5003065-5003084 Msa1173990:CDS 30.0%
CAAAACTAAGATTTGGAGAT+GGG - chr8_1:5003066-5003085 Msa1173990:CDS 30.0%
ATACAAATTCTCATGCTACA+AGG - chr8_1:5003297-5003316 Msa1173990:intron 30.0%
! CTATTGACTGATATTCCATT+TGG + chr8_1:5003353-5003372 None:intergenic 30.0%
CTTAATGAATTGTCGACAAA+AGG + chr8_1:5003701-5003720 None:intergenic 30.0%
! CTTTTGTCGACAATTCATTA+AGG - chr8_1:5003699-5003718 Msa1173990:intron 30.0%
TTTGTCGACAATTCATTAAG+GGG - chr8_1:5003701-5003720 Msa1173990:intron 30.0%
TTGATCTCAATGTTTGTACT+CGG + chr8_1:5003743-5003762 None:intergenic 30.0%
! GATAATGAGTTTGACTTAGA+TGG - chr8_1:5003943-5003962 Msa1173990:CDS 30.0%
TAACAGGATCTGTTATAAAC+TGG + chr8_1:5003988-5004007 None:intergenic 30.0%
TAGTTGCCAATGTAAATAGT+TGG - chr8_1:5004024-5004043 Msa1173990:five_prime_UTR 30.0%
ATGTAAAAATTTCAGGCTTC+AGG - chr8_1:5004130-5004149 Msa1173990:five_prime_UTR 30.0%
TGTAAAAATTTCAGGCTTCA+GGG - chr8_1:5004131-5004150 Msa1173990:five_prime_UTR 30.0%
! GTTGTTGTTGTTGAGTTTCA+TGG + chr8_1:5000124-5000143 None:intergenic 35.0%
CATCATCAACAACAAGTACA+CGG + chr8_1:5000221-5000240 None:intergenic 35.0%
! AAAAACGGAGCATTCTTTCA+AGG + chr8_1:5000263-5000282 None:intergenic 35.0%
AAGATTGAAGACCTTCATAG+AGG + chr8_1:5000287-5000306 None:intergenic 35.0%
AGTTTGAATCCATCCATATC+AGG + chr8_1:5000746-5000765 None:intergenic 35.0%
! GGAAAAAACGTGGTAATGAA+AGG - chr8_1:5000931-5000950 Msa1173990:CDS 35.0%
!! TCGAGGCTTTGAAGAATATA+TGG - chr8_1:5000998-5001017 Msa1173990:CDS 35.0%
TTCGGAAGAGAAAGAATAAC+TGG - chr8_1:5001031-5001050 Msa1173990:CDS 35.0%
AGATGAGTAATTAGCATCAG+TGG + chr8_1:5001112-5001131 None:intergenic 35.0%
TACTCATCTTCAACGAATGA+AGG - chr8_1:5001123-5001142 Msa1173990:CDS 35.0%
AAGAAGATGAAGCAGATGAT+AGG - chr8_1:5001172-5001191 Msa1173990:CDS 35.0%
AGAAGATGAAGCAGATGATA+GGG - chr8_1:5001173-5001192 Msa1173990:CDS 35.0%
TGAGCTTCATCAACAGTTTA+TGG - chr8_1:5001239-5001258 Msa1173990:CDS 35.0%
TATGGCTGTTGTGAATCAAT+TGG - chr8_1:5001257-5001276 Msa1173990:CDS 35.0%
ATGGCTGTTGTGAATCAATT+GGG - chr8_1:5001258-5001277 Msa1173990:CDS 35.0%
TAAGATTCTATGGGGGAAAA+GGG + chr8_1:5001451-5001470 None:intergenic 35.0%
TTAAGATTCTATGGGGGAAA+AGG + chr8_1:5001452-5001471 None:intergenic 35.0%
GGCTGTTCCTAAAAAGATTA+TGG - chr8_1:5001559-5001578 Msa1173990:intron 35.0%
ATGGAAATGATGAATGTTCC+TGG - chr8_1:5001578-5001597 Msa1173990:intron 35.0%
TGGAAATGATGAATGTTCCT+GGG - chr8_1:5001579-5001598 Msa1173990:intron 35.0%
ATATCATACCTGAAGATGAC+TGG + chr8_1:5001624-5001643 None:intergenic 35.0%
CAAAATCAGTTTGTACGATG+AGG + chr8_1:5001747-5001766 None:intergenic 35.0%
GCCTATATAAGATCTCATGT+AGG - chr8_1:5001804-5001823 Msa1173990:intron 35.0%
CCCTACATGAGATCTTATAT+AGG + chr8_1:5001808-5001827 None:intergenic 35.0%
CTTTATAAAAAGCTTGAGCC+TGG + chr8_1:5001916-5001935 None:intergenic 35.0%
AACTCAAGCCTTCATATGAT+TGG - chr8_1:5002064-5002083 Msa1173990:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr8_1:5002106-5002125 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr8_1:5002206-5002225 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr8_1:5002210-5002229 None:intergenic 35.0%
! CTTTAGGCCTTCGTAAATTT+TGG - chr8_1:5002438-5002457 Msa1173990:intron 35.0%
! AGGCTTTTAAATAGGCTTTC+GGG - chr8_1:5002509-5002528 Msa1173990:CDS 35.0%
GTAACTCTTAACATTCAAGG+TGG + chr8_1:5002778-5002797 None:intergenic 35.0%
AATACCGTTTGTATCTTCGA+AGG - chr8_1:5002862-5002881 Msa1173990:CDS 35.0%
TCAACCTTCGAAGATACAAA+CGG + chr8_1:5002869-5002888 None:intergenic 35.0%
! ATTCAAGTTACTTTGCTGCT+GGG + chr8_1:5002901-5002920 None:intergenic 35.0%
! TATTCAAGTTACTTTGCTGC+TGG + chr8_1:5002902-5002921 None:intergenic 35.0%
TGAAAATTGGCAAACTGCTT+TGG + chr8_1:5003158-5003177 None:intergenic 35.0%
GTAGGTTGCATTAAAGATGA+TGG + chr8_1:5003326-5003345 None:intergenic 35.0%
TCATCTTTAATGCAACCTAC+AGG - chr8_1:5003326-5003345 Msa1173990:intron 35.0%
ATATCCAGTAGCAGTACAAA+AGG - chr8_1:5003398-5003417 Msa1173990:CDS 35.0%
!! TACAAAAGGCGTGTTTTATG+CGG - chr8_1:5003412-5003431 Msa1173990:CDS 35.0%
ACTTCGGGAATTAAAGGATT+AGG - chr8_1:5003440-5003459 Msa1173990:CDS 35.0%
CTTCGGGAATTAAAGGATTA+GGG - chr8_1:5003441-5003460 Msa1173990:CDS 35.0%
TTCGGGAATTAAAGGATTAG+GGG - chr8_1:5003442-5003461 Msa1173990:CDS 35.0%
TCCATCAAAAGTCCAATGAT+TGG - chr8_1:5003492-5003511 Msa1173990:intron 35.0%
CCATCAAAAGTCCAATGATT+GGG - chr8_1:5003493-5003512 Msa1173990:intron 35.0%
CATCAAAAGTCCAATGATTG+GGG - chr8_1:5003494-5003513 Msa1173990:intron 35.0%
! ATTTGCTAATCCCCAATCAT+TGG + chr8_1:5003507-5003526 None:intergenic 35.0%
CAACATGCAAATCCTTTACA+AGG - chr8_1:5003551-5003570 Msa1173990:intron 35.0%
AGATCAATGTTGCCTTGTAA+AGG + chr8_1:5003566-5003585 None:intergenic 35.0%
AATAGAGATGGTATGAGTCA+AGG - chr8_1:5003641-5003660 Msa1173990:intron 35.0%
! GATATTTAGGGTCAACAGAA+AGG + chr8_1:5003831-5003850 None:intergenic 35.0%
ATAAACTGGAATGTTGTCTG+CGG + chr8_1:5003974-5003993 None:intergenic 35.0%
TGATTAGAAAGAGAGCTAAC+AGG + chr8_1:5004004-5004023 None:intergenic 35.0%
GGAACACCAACTATTTACAT+TGG + chr8_1:5004033-5004052 None:intergenic 35.0%
GAGTGATGATTAGATTCATG+TGG + chr8_1:5004054-5004073 None:intergenic 35.0%
TCAACTTCACCATCAAACTC+CGG - chr8_1:5000162-5000181 Msa1173990:CDS 40.0%
GCATTCTTTCAAGGATCATG+AGG + chr8_1:5000254-5000273 None:intergenic 40.0%
GACCTTCATAGAGGCAAAAA+CGG + chr8_1:5000278-5000297 None:intergenic 40.0%
! GGAACATATTGGATTGGAGA+TGG - chr8_1:5000769-5000788 Msa1173990:CDS 40.0%
! GTAATGAAAGGTGTGACACA+CGG - chr8_1:5000943-5000962 Msa1173990:CDS 40.0%
GAAGAATATATGGCAGCATG+TGG - chr8_1:5001008-5001027 Msa1173990:CDS 40.0%
ATATATGGCAGCATGTGGTT+CGG - chr8_1:5001013-5001032 Msa1173990:CDS 40.0%
! TGGAAAGATCTGAAGCAATC+TGG - chr8_1:5001051-5001070 Msa1173990:CDS 40.0%
! AAAGATCTGAAGCAATCTGG+TGG - chr8_1:5001054-5001073 Msa1173990:CDS 40.0%
TCAATAGACCAAACAACTCG+AGG + chr8_1:5001222-5001241 None:intergenic 40.0%
GGTCATATCTCATCTAACGT+GGG + chr8_1:5001692-5001711 None:intergenic 40.0%
AGGTCATATCTCATCTAACG+TGG + chr8_1:5001693-5001712 None:intergenic 40.0%
TATAAGATCTCATGTAGGGG+TGG - chr8_1:5001809-5001828 Msa1173990:intron 40.0%
ATAAGATCTCATGTAGGGGT+GGG - chr8_1:5001810-5001829 Msa1173990:intron 40.0%
CTTTAAATAGGCTAGGCCAT+AGG + chr8_1:5001861-5001880 None:intergenic 40.0%
!! AGCTAGGCTTTAAATAGGCT+AGG + chr8_1:5001868-5001887 None:intergenic 40.0%
! AGCCTATTTAAAGCCTAGCT+CGG - chr8_1:5001868-5001887 Msa1173990:intron 40.0%
! GCCTTGTTAATAAACGAGCT+GGG + chr8_1:5001894-5001913 None:intergenic 40.0%
AAAAAGCCTATTAAGCCCGT+CGG - chr8_1:5001971-5001990 Msa1173990:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr8_1:5002345-5002364 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr8_1:5002207-5002226 None:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG - chr8_1:5002344-5002363 Msa1173990:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr8_1:5002345-5002364 Msa1173990:intron 40.0%
GGAGGGAGTAGTAGATATAT+TGG - chr8_1:5002362-5002381 Msa1173990:intron 40.0%
GCTTCATCAGGCCTTTAAAT+AGG - chr8_1:5002531-5002550 Msa1173990:CDS 40.0%
AAAAATTATAGGCCTGAGCC+TGG + chr8_1:5002598-5002617 None:intergenic 40.0%
ATGTCCACTTATCAGTGTGA+GGG - chr8_1:5002731-5002750 Msa1173990:intron 40.0%
TTGTATCTTCGAAGGTTGAG+TGG - chr8_1:5002870-5002889 Msa1173990:CDS 40.0%
AGTACGCCAGAGTCAATATT+TGG - chr8_1:5002933-5002952 Msa1173990:CDS 40.0%
!! GTTCCTCCAAATATTGACTC+TGG + chr8_1:5002942-5002961 None:intergenic 40.0%
ACATATGAGCAGCAGTAAAC+CGG - chr8_1:5003097-5003116 Msa1173990:CDS 40.0%
AAACCGGTGAACTTTCTTCA+CGG - chr8_1:5003113-5003132 Msa1173990:CDS 40.0%
ATTCCGTGAAGAAAGTTCAC+CGG + chr8_1:5003119-5003138 None:intergenic 40.0%
! GCTTTGGCTCAATGTTGATA+GGG + chr8_1:5003142-5003161 None:intergenic 40.0%
! TGCTTTGGCTCAATGTTGAT+AGG + chr8_1:5003143-5003162 None:intergenic 40.0%
TTGAGCAGACTGGTGAAAAT+TGG + chr8_1:5003171-5003190 None:intergenic 40.0%
TCATTTAGCATCTGACCTCT+TGG + chr8_1:5003275-5003294 None:intergenic 40.0%
GATATTCCATTTGGTCCTGT+AGG + chr8_1:5003344-5003363 None:intergenic 40.0%
! GTTTTATGCGGAAGCTACTT+CGG - chr8_1:5003424-5003443 Msa1173990:CDS 40.0%
! TTTTATGCGGAAGCTACTTC+GGG - chr8_1:5003425-5003444 Msa1173990:CDS 40.0%
GAAGCTACTTCGGGAATTAA+AGG - chr8_1:5003434-5003453 Msa1173990:CDS 40.0%
TCGGGAATTAAAGGATTAGG+GGG - chr8_1:5003443-5003462 Msa1173990:CDS 40.0%
! CCCAATCATTGGACTTTTGA+TGG + chr8_1:5003496-5003515 None:intergenic 40.0%
! GATTGGGGATTAGCAAATAC+AGG - chr8_1:5003509-5003528 Msa1173990:intron 40.0%
!! GTTGAGAAGCATCATATGTC+AGG + chr8_1:5003535-5003554 None:intergenic 40.0%
! CTCTATTTTGTCGAGTCTGT+TGG + chr8_1:5003628-5003647 None:intergenic 40.0%
CAGACTCGACAAAATAGAGA+TGG - chr8_1:5003629-5003648 Msa1173990:intron 40.0%
CAAGGTGATCACCATAATGT+TGG - chr8_1:5003659-5003678 Msa1173990:intron 40.0%
!! TGAGGTGTTGACCAACATTA+TGG + chr8_1:5003673-5003692 None:intergenic 40.0%
! TGTCGACAAAAGGTGTATTG+AGG + chr8_1:5003691-5003710 None:intergenic 40.0%
!! TGACTGACTTGATCAGAGAA+GGG + chr8_1:5003767-5003786 None:intergenic 40.0%
!! TTGACTGACTTGATCAGAGA+AGG + chr8_1:5003768-5003787 None:intergenic 40.0%
ACAGAAAGGAAAAACCAACC+TGG + chr8_1:5003817-5003836 None:intergenic 40.0%
TTGTATTTCTCGCAGCACAA+AGG - chr8_1:5003907-5003926 Msa1173990:CDS 40.0%
TGGTGAAGTTGAGGTTGACA+TGG + chr8_1:5000154-5000173 None:intergenic 45.0%
!! GGAGTTTGATGGTGAAGTTG+AGG + chr8_1:5000163-5000182 None:intergenic 45.0%
ATAAGGTTGCCGGAGTTTGA+TGG + chr8_1:5000174-5000193 None:intergenic 45.0%
CAAGGATCATGAGGCAAGTA+GGG + chr8_1:5000245-5000264 None:intergenic 45.0%
TCAAGGATCATGAGGCAAGT+AGG + chr8_1:5000246-5000265 None:intergenic 45.0%
!! CTCCGTTTTTGCCTCTATGA+AGG - chr8_1:5000273-5000292 Msa1173990:intron 45.0%
TACCAAATGCAAGAGAGCTG+AGG - chr8_1:5000655-5000674 Msa1173990:CDS 45.0%
AACCTCAGCTCTCTTGCATT+TGG + chr8_1:5000660-5000679 None:intergenic 45.0%
GTGCATATGCCTGATATGGA+TGG - chr8_1:5000734-5000753 Msa1173990:CDS 45.0%
! TTAGTGATGTCGGCTGATGA+TGG - chr8_1:5000910-5000929 Msa1173990:CDS 45.0%
!! GGCTGATGATGGAAAAAACG+TGG - chr8_1:5000921-5000940 Msa1173990:CDS 45.0%
AATCAAACCTGTGCGAATCG+AGG - chr8_1:5000981-5001000 Msa1173990:CDS 45.0%
AAGGCAAGAGCTCAAAGAAG+AGG - chr8_1:5001142-5001161 Msa1173990:CDS 45.0%
CAAGAGCTCAAAGAAGAGGA+GGG - chr8_1:5001146-5001165 Msa1173990:CDS 45.0%
! CAAAGAAGCCTCGAGTTGTT+TGG - chr8_1:5001211-5001230 Msa1173990:CDS 45.0%
GTACGTTAGATGAGATACCG+TGG + chr8_1:5001355-5001374 None:intergenic 45.0%
AAACGTTGCCAGTCATCTTC+AGG - chr8_1:5001613-5001632 Msa1173990:intron 45.0%
GCCCAGCTCGTTTATTAACA+AGG - chr8_1:5001890-5001909 Msa1173990:intron 45.0%
!! GGCCTTGTTAATAAACGAGC+TGG + chr8_1:5001895-5001914 None:intergenic 45.0%
GCTCGTTTATTAACAAGGCC+AGG - chr8_1:5001895-5001914 Msa1173990:intron 45.0%
AAAAGCCTATTAAGCCCGTC+GGG - chr8_1:5001972-5001991 Msa1173990:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr8_1:5002103-5002122 None:intergenic 45.0%
ATCAGGCCTTTAAATAGGCC+AGG - chr8_1:5002536-5002555 Msa1173990:CDS 45.0%
CCTCGAAATTGAGCCTATGA+CGG - chr8_1:5002564-5002583 Msa1173990:CDS 45.0%
CTCGAAATTGAGCCTATGAC+GGG - chr8_1:5002565-5002584 Msa1173990:CDS 45.0%
!! TTGAGCCTATGACGGGTAAT+AGG - chr8_1:5002572-5002591 Msa1173990:intron 45.0%
!!! TTTTTGAAGTAGGCCAGGCT+TGG - chr8_1:5002613-5002632 Msa1173990:intron 45.0%
!!! TTTTGAAGTAGGCCAGGCTT+GGG - chr8_1:5002614-5002633 Msa1173990:intron 45.0%
TAGCCTATTTCCACCCTCAT+GGG - chr8_1:5002659-5002678 Msa1173990:intron 45.0%
CACACTGATAAGTGGACATC+TGG + chr8_1:5002730-5002749 None:intergenic 45.0%
GATGTCCACTTATCAGTGTG+AGG - chr8_1:5002730-5002749 Msa1173990:intron 45.0%
TGTCCACTTATCAGTGTGAG+GGG - chr8_1:5002732-5002751 Msa1173990:intron 45.0%
ACGCCAGAGTCAATATTTGG+AGG - chr8_1:5002936-5002955 Msa1173990:CDS 45.0%
CTTCAAACCCTTTCAGCTTC+TGG - chr8_1:5002981-5003000 Msa1173990:CDS 45.0%
ATGCAACCTACAGGACCAAA+TGG - chr8_1:5003335-5003354 Msa1173990:intron 45.0%
TTTCCCTCTTAGATGCACTC+CGG - chr8_1:5003373-5003392 Msa1173990:CDS 45.0%
GTACTGCTACTGGATATACC+CGG + chr8_1:5003395-5003414 None:intergenic 45.0%
GGATAGAGGAAAAACCACGA+TGG + chr8_1:5003607-5003626 None:intergenic 45.0%
TTGTCGAGTCTGTTGGATAG+AGG + chr8_1:5003621-5003640 None:intergenic 45.0%
!! GACTGACTTGATCAGAGAAG+GGG + chr8_1:5003766-5003785 None:intergenic 45.0%
CTCTGATCAAGTCAGTCAAG+AGG - chr8_1:5003769-5003788 Msa1173990:intron 45.0%
! CATGAGCGTATTTCTGAACC+AGG - chr8_1:5003796-5003815 Msa1173990:intron 45.0%
! AGCGTATTTCTGAACCAGGT+TGG - chr8_1:5003800-5003819 Msa1173990:intron 45.0%
!!! TTTTTTTTTTTTTATTGATT+TGG - chr8_1:5000818-5000837 Msa1173990:CDS 5.0%
CCTTATCTCCGACCAGTTTC+CGG - chr8_1:5000188-5000207 Msa1173990:CDS 50.0%
CGACGTGCATATGCCTGATA+TGG - chr8_1:5000730-5000749 Msa1173990:CDS 50.0%
! TTCAAAGCCTCGATTCGCAC+AGG + chr8_1:5000991-5001010 None:intergenic 50.0%
GCAAGAGCTCAAAGAAGAGG+AGG - chr8_1:5001145-5001164 Msa1173990:CDS 50.0%
! ACGTTTTCTCTAGTGAGCCC+AGG + chr8_1:5001599-5001618 None:intergenic 50.0%
!! GGCCGAGCTAGGCTTTAAAT+AGG + chr8_1:5001873-5001892 None:intergenic 50.0%
ATAGGCTTTCGGGCTTCATC+AGG - chr8_1:5002519-5002538 Msa1173990:CDS 50.0%
ATAGGCTCAATTTCGAGGCC+TGG + chr8_1:5002562-5002581 None:intergenic 50.0%
CCGTCATAGGCTCAATTTCG+AGG + chr8_1:5002567-5002586 None:intergenic 50.0%
CATGAGGGTGGAAATAGGCT+AGG + chr8_1:5002660-5002679 None:intergenic 50.0%
CTAGCCTATTTCCACCCTCA+TGG - chr8_1:5002658-5002677 Msa1173990:intron 50.0%
GGCTATCAAGTCACCGCTAT+TGG - chr8_1:5002687-5002706 Msa1173990:intron 50.0%
GTCCACTTATCAGTGTGAGG+GGG - chr8_1:5002733-5002752 Msa1173990:intron 50.0%
TGACTCTGGCGTACTCATGA+AGG + chr8_1:5002928-5002947 None:intergenic 50.0%
GAACTGGCCAGAAGCTGAAA+GGG + chr8_1:5002991-5003010 None:intergenic 50.0%
AGAACTGGCCAGAAGCTGAA+AGG + chr8_1:5002992-5003011 None:intergenic 50.0%
TTCAGCTTCTGGCCAGTTCT+CGG - chr8_1:5002992-5003011 Msa1173990:CDS 50.0%
CTAGACTTTGCACCGAGAAC+TGG + chr8_1:5003007-5003026 None:intergenic 50.0%
! AAGTCCTGCTGCTTGAAGCT+TGG + chr8_1:5003030-5003049 None:intergenic 50.0%
CACCAGTCTGCTCAATCCTT+TGG - chr8_1:5003176-5003195 Msa1173990:CDS 50.0%
TGCCAAAGGATTGAGCAGAC+TGG + chr8_1:5003181-5003200 None:intergenic 50.0%
TCGCATATTTGCGCTGCCAA+AGG + chr8_1:5003195-5003214 None:intergenic 50.0%
! AAGCCCTTGGTTGATGCAGA+TGG - chr8_1:5003238-5003257 Msa1173990:intron 50.0%
GAGCCATCTGCATCAACCAA+GGG + chr8_1:5003244-5003263 None:intergenic 50.0%
TGAGCCATCTGCATCAACCA+AGG + chr8_1:5003245-5003264 None:intergenic 50.0%
ATGGCTCAGTCTCAACCAAG+AGG - chr8_1:5003257-5003276 Msa1173990:intron 50.0%
TTCCCTCTTAGATGCACTCC+GGG - chr8_1:5003374-5003393 Msa1173990:CDS 50.0%
TACCCGGAGTGCATCTAAGA+GGG + chr8_1:5003379-5003398 None:intergenic 50.0%
ATACCCGGAGTGCATCTAAG+AGG + chr8_1:5003380-5003399 None:intergenic 50.0%
! CACGCCTTTTGTACTGCTAC+TGG + chr8_1:5003405-5003424 None:intergenic 50.0%
!!! GATCTCTCGCCGTCGATTTT+AGG - chr8_1:5003581-5003600 Msa1173990:intron 50.0%
CCACGATGGCCTAAAATCGA+CGG + chr8_1:5003593-5003612 None:intergenic 50.0%
CTGGTCGGAGATAAGGTTGC+CGG + chr8_1:5000184-5000203 None:intergenic 55.0%
CCGGAAACTGGTCGGAGATA+AGG + chr8_1:5000191-5000210 None:intergenic 55.0%
TATCTCCGACCAGTTTCCGG+CGG - chr8_1:5000191-5000210 Msa1173990:CDS 55.0%
TCTCATGTAGGGGTGGGAAC+AGG - chr8_1:5001816-5001835 Msa1173990:intron 55.0%
GCCTTTAAATAGGCCAGGCC+AGG - chr8_1:5002541-5002560 Msa1173990:CDS 55.0%
GCCTGGCCTGGCCTATTTAA+AGG + chr8_1:5002545-5002564 None:intergenic 55.0%
CCTGGCCTATTACCCGTCAT+AGG + chr8_1:5002580-5002599 None:intergenic 55.0%
!! CCTATGACGGGTAATAGGCC+AGG - chr8_1:5002577-5002596 Msa1173990:intron 55.0%
AGGGTGGAAATAGGCTAGGC+CGG + chr8_1:5002656-5002675 None:intergenic 55.0%
TGGCCCATGAGGGTGGAAAT+AGG + chr8_1:5002665-5002684 None:intergenic 55.0%
TGATAGCCAGTGGCCCATGA+GGG + chr8_1:5002675-5002694 None:intergenic 55.0%
! TTGATAGCCAGTGGCCCATG+AGG + chr8_1:5002676-5002695 None:intergenic 55.0%
! AGCGGTGACTTGATAGCCAG+TGG + chr8_1:5002685-5002704 None:intergenic 55.0%
! ATCTGGAGTGTGACTCGAGC+GGG + chr8_1:5002713-5002732 None:intergenic 55.0%
! CATCTGGAGTGTGACTCGAG+CGG + chr8_1:5002714-5002733 None:intergenic 55.0%
CACCCCCTCACACTGATAAG+TGG + chr8_1:5002738-5002757 None:intergenic 55.0%
CTAGCCAAGCTTCAAGCAGC+AGG - chr8_1:5003023-5003042 Msa1173990:CDS 55.0%
CTGCTGCAAAGAGAAGCCCT+TGG - chr8_1:5003225-5003244 Msa1173990:intron 55.0%
!!! CCGTCGATTTTAGGCCATCG+TGG - chr8_1:5003590-5003609 Msa1173990:intron 55.0%
! TTCTCGCAGCACAAAGGCGT+TGG - chr8_1:5003913-5003932 Msa1173990:CDS 55.0%
ATCTCCGACCAGTTTCCGGC+GGG - chr8_1:5000192-5000211 Msa1173990:CDS 60.0%
ACAAGTACACGGAGACCCGC+CGG + chr8_1:5000210-5000229 None:intergenic 60.0%
TAAACGAGCTGGGCCGAGCT+AGG + chr8_1:5001884-5001903 None:intergenic 60.0%
AGCTTAATAGGCCGGCCCGA+CGG + chr8_1:5001990-5002009 None:intergenic 60.0%
CTCAATTTCGAGGCCTGGCC+TGG + chr8_1:5002557-5002576 None:intergenic 60.0%
ACGGGTAATAGGCCAGGCTC+AGG - chr8_1:5002583-5002602 Msa1173990:intron 60.0%
! GGCTTTGTAAGGCCCAAGCC+TGG + chr8_1:5002629-5002648 None:intergenic 60.0%
GGCTTGGGCCTTACAAAGCC+CGG - chr8_1:5002629-5002648 Msa1173990:intron 60.0%
GGGTGGAAATAGGCTAGGCC+GGG + chr8_1:5002655-5002674 None:intergenic 60.0%
TTTCCACCCTCATGGGCCAC+TGG - chr8_1:5002666-5002685 Msa1173990:intron 60.0%
TGACTCGAGCGGGCCAATAG+CGG + chr8_1:5002703-5002722 None:intergenic 60.0%
GAGACCCGCCGGAAACTGGT+CGG + chr8_1:5000199-5000218 None:intergenic 65.0%
TGTAGGGGTGGGAACAGGCC+AGG - chr8_1:5001821-5001840 Msa1173990:intron 65.0%
GCTAGGCCATAGGCCCCTGT+CGG + chr8_1:5001851-5001870 None:intergenic 65.0%
GCCTATTAAGCCCGTCGGGC+CGG - chr8_1:5001976-5001995 Msa1173990:intron 65.0%
GCTTAATAGGCCGGCCCGAC+GGG + chr8_1:5001989-5002008 None:intergenic 65.0%
GAAATAGGCTAGGCCGGGCC+GGG + chr8_1:5002650-5002669 None:intergenic 65.0%
GGAAATAGGCTAGGCCGGGC+CGG + chr8_1:5002651-5002670 None:intergenic 65.0%
TAGCCAGTGGCCCATGAGGG+TGG + chr8_1:5002672-5002691 None:intergenic 65.0%
CACGGAGACCCGCCGGAAAC+TGG + chr8_1:5000203-5000222 None:intergenic 70.0%
AACAGGCCAGGCCGTCCGAC+AGG - chr8_1:5001833-5001852 Msa1173990:intron 70.0%
ACAGGCCAGGCCGTCCGACA+GGG - chr8_1:5001834-5001853 Msa1173990:intron 70.0%
GGCCATAGGCCCCTGTCGGA+CGG + chr8_1:5001847-5001866 None:intergenic 70.0%
! GCCGGCCCGACGGGCTTAAT+AGG + chr8_1:5001980-5001999 None:intergenic 70.0%
GGGCCTTACAAAGCCCGGCC+CGG - chr8_1:5002634-5002653 Msa1173990:intron 70.0%
! AGGCCGGGCCGGGCTTTGTA+AGG + chr8_1:5002640-5002659 None:intergenic 70.0%
CAGGCCAGGCCGTCCGACAG+GGG - chr8_1:5001835-5001854 Msa1173990:intron 75.0%
TAGGCCCCTGTCGGACGGCC+TGG + chr8_1:5001842-5001861 None:intergenic 75.0%
GGCCGTCCGACAGGGGCCTA+TGG - chr8_1:5001842-5001861 Msa1173990:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 4999918 5004225 4999918 ID=Msa1173990;Name=Msa1173990
chr8_1 mRNA 4999918 5004225 4999918 ID=Msa1173990-mRNA-1;Parent=Msa1173990;Name=Msa1173990-mRNA-1;_AED=0.03;_eAED=0.03;_QI=205|1|1|1|0.83|0.71|7|197|606
chr8_1 exon 4999918 4999950 4999918 ID=Msa1173990-mRNA-1:exon:1686;Parent=Msa1173990-mRNA-1
chr8_1 exon 4999971 5000221 4999971 ID=Msa1173990-mRNA-1:exon:1685;Parent=Msa1173990-mRNA-1
chr8_1 exon 5000326 5001282 5000326 ID=Msa1173990-mRNA-1:exon:1684;Parent=Msa1173990-mRNA-1
chr8_1 exon 5002509 5002585 5002509 ID=Msa1173990-mRNA-1:exon:1683;Parent=Msa1173990-mRNA-1
chr8_1 exon 5002855 5003229 5002855 ID=Msa1173990-mRNA-1:exon:1682;Parent=Msa1173990-mRNA-1
chr8_1 exon 5003337 5003489 5003337 ID=Msa1173990-mRNA-1:exon:1681;Parent=Msa1173990-mRNA-1
chr8_1 exon 5003849 5004225 5003849 ID=Msa1173990-mRNA-1:exon:1680;Parent=Msa1173990-mRNA-1
chr8_1 five_prime_UTR 5004021 5004225 5004021 ID=Msa1173990-mRNA-1:five_prime_utr;Parent=Msa1173990-mRNA-1
chr8_1 CDS 5003849 5004020 5003849 ID=Msa1173990-mRNA-1:cds;Parent=Msa1173990-mRNA-1
chr8_1 CDS 5003337 5003489 5003337 ID=Msa1173990-mRNA-1:cds;Parent=Msa1173990-mRNA-1
chr8_1 CDS 5002855 5003229 5002855 ID=Msa1173990-mRNA-1:cds;Parent=Msa1173990-mRNA-1
chr8_1 CDS 5002509 5002585 5002509 ID=Msa1173990-mRNA-1:cds;Parent=Msa1173990-mRNA-1
chr8_1 CDS 5000326 5001282 5000326 ID=Msa1173990-mRNA-1:cds;Parent=Msa1173990-mRNA-1
chr8_1 CDS 5000135 5000221 5000135 ID=Msa1173990-mRNA-1:cds;Parent=Msa1173990-mRNA-1
chr8_1 three_prime_UTR 4999971 5000134 4999971 ID=Msa1173990-mRNA-1:three_prime_utr;Parent=Msa1173990-mRNA-1
chr8_1 three_prime_UTR 4999918 4999950 4999918 ID=Msa1173990-mRNA-1:three_prime_utr;Parent=Msa1173990-mRNA-1
Gene Sequence

>Msa1173990

ATGAAACTCAACAACAACAACAAAATTTCCATGTCAACCTCAACTTCACCATCAAACTCCGGCAACCTTATCTCCGACCAGTTTCCGGCGGGTCTCCGTGTACTTGTTGTTGATGATGACCCTACTTGCCTCATGATCCTTGAAAGAATGCTCCGTTTTTGCCTCTATGAAGTTACCAAATGCAAGAGAGCTGAGGTTGCATTATCACTTCTTAGAGAGAATAAAAACGGGTTCGACATTGTTTTAAGCGACGTGCATATGCCTGATATGGATGGATTCAAACTTTTGGAACATATTGGATTGGAGATGGATCTTCCTGTTATTATGATGTCGGCTGATGATGGAAAAAACGTGGTAATGAAAGGTGTGACACACGGTGCTTGTGATTATCTAATCAAACCTGTGCGAATCGAGGCTTTGAAGAATATATGGCAGCATGTGGTTCGGAAGAGAAAGAATAACTGGAAAGATCTGAAGCAATCTGGTGGATTAGATGAAAGAGATCGAGAAAAAATTGTGTCCACTGATGCTAATTACTCATCTTCAACGAATGAAGGCAAGAGCTCAAAGAAGAGGAGGGATGAAGAAGATGAAGCAGATGATAGGGATGATTGTTCGACGTCAAAGAAGCCTCGAGTTGTTTGGTCTATTGAGCTTCATCAACAGTTTATGGCTGTTGTGAATCAATTGGGATTAGACAAGGCTGTTCCTAAAAAGATTATGGAAATGATGAATGTTCCTGGGCTCACTAGAGAAAACGTTGCCAGTCATCTTCAGAAATACCGTTTGTATCTTCGAAGGTTGAGTGGAGTTTCCCAGCAGCAAAGTAACTTGAATAACTCCTTCATGAGTACGCCAGAGTCAATATTTGGAGGAACCTCCGTAAATGAAATTGATCTTCAAACCCTTTCAGCTTCTGGCCAGTTCTCGGTGCAAAGTCTAGCCAAGCTTCAAGCAGCAGGACTTTACAGTCCTGAGAACTCAAAACTAAGATTTGGAGATGGGCAACTGCAACATATGAGCAGCAGTAAACCGGTGAACTTTCTTCACGGAATCCCTATCAACATTGAGCCAAAGCAGTTTGCCAATTTTCACCAGTCTGCTCAATCCTTTGGCAGCGCAAATATGCGAGTCAATGCTTCTGCTGCAAAGAGAAGCCCTTGGTTGATGCAGATGGCTCAGTCTCAACCAAGAGGTCAGATGCTAAATGAGAATACAAATTCTCATGCTACAAGGTTTCCATCATCTTTAATGCAACCTACAGGACCAAATGGAATATCAGTCAATAGTTTCCCTCTTAGATGCACTCCGGGTATATCCAGTAGCAGTACAAAAGGCGTGTTTTATGCGGAAGCTACTTCGGGAATTAAAGGATTAGGGGGATTTAGTTATGATGTTTATAATGAACTCCATCAAAAGTCCAATGATTGGGGATTAGCAAATACAGGCCTGACATATGATGCTTCTCAACATGCAAATCCTTTACAAGGCAACATTGATCTCTCGCCGTCGATTTTAGGCCATCGTGGTTTTTCCTCTATCCAACAGACTCGACAAAATAGAGATGGTATGAGTCAAGGTGATCACCATAATGTTGGTCAACACCTCAATACACCTTTTGTCGACAATTCATTAAGGGGTAAGAGTGAAAGAATTCCGAGTACAAACATTGAGATCAACCCCTTCTCTGATCAAGTCAGTCAAGAGGATCTCATGAGCGTATTTCTGAACCAGCACAAAGGCGTTGGACAAGTTGATAATGAGTTTGACTTAGATGGATATTCCGCAGACAACATTCCAGTTTATAACAGATCCTGTTAG
Protein sequence

>Msa1173990

MKLNNNNKISMSTSTSPSNSGNLISDQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKRKNNWKDLKQSGGLDERDREKIVSTDANYSSSTNEGKSSKKRRDEEDEADDRDDCSTSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENVASHLQKYRLYLRRLSGVSQQQSNLNNSFMSTPESIFGGTSVNEIDLQTLSASGQFSVQSLAKLQAAGLYSPENSKLRFGDGQLQHMSSSKPVNFLHGIPINIEPKQFANFHQSAQSFGSANMRVNASAAKRSPWLMQMAQSQPRGQMLNENTNSHATRFPSSLMQPTGPNGISVNSFPLRCTPGISSSSTKGVFYAEATSGIKGLGGFSYDVYNELHQKSNDWGLANTGLTYDASQHANPLQGNIDLSPSILGHRGFSSIQQTRQNRDGMSQGDHHNVGQHLNTPFVDNSLRGKSERIPSTNIEINPFSDQVSQEDLMSVFLNQHKGVGQVDNEFDLDGYSADNIPVYNRSC*